BLASTX nr result

ID: Ephedra25_contig00013028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00013028
         (509 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN41214.1| unknown [Picea sitchensis]                              92   5e-17
gb|ABR17384.1| unknown [Picea sitchensis]                              92   5e-17
gb|AEW08941.1| hypothetical protein CL2356Contig1_05, partial [P...    81   2e-13
gb|AFG49982.1| hypothetical protein CL2356Contig1_05, partial [P...    80   4e-13
ref|XP_001775093.1| predicted protein [Physcomitrella patens] gi...    62   1e-07

>gb|ACN41214.1| unknown [Picea sitchensis]
          Length = 194

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 47/63 (74%), Positives = 51/63 (80%)
 Frame = +3

Query: 3   GLGMLCGSSQEAQEQLAETDGAISMLLSLMRSSDPDIRAITHDLFASLSSSSYVKQKIEQ 182
           GLGMLCGSSQEAQEQLAETD AI  LL L++S DPDIRAI HDLFA+L S+  VK KIE 
Sbjct: 124 GLGMLCGSSQEAQEQLAETDSAIGTLLHLIKSDDPDIRAIAHDLFAALCSNKQVKPKIEH 183

Query: 183 FLR 191
            LR
Sbjct: 184 VLR 186


>gb|ABR17384.1| unknown [Picea sitchensis]
          Length = 307

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 47/63 (74%), Positives = 51/63 (80%)
 Frame = +3

Query: 3   GLGMLCGSSQEAQEQLAETDGAISMLLSLMRSSDPDIRAITHDLFASLSSSSYVKQKIEQ 182
           GLGMLCGSSQEAQEQLAETD AI  LL L++S DPDIRAI HDLFA+L S+  VK KIE 
Sbjct: 237 GLGMLCGSSQEAQEQLAETDSAIGTLLHLIKSDDPDIRAIAHDLFAALCSNKQVKPKIEH 296

Query: 183 FLR 191
            LR
Sbjct: 297 VLR 299


>gb|AEW08941.1| hypothetical protein CL2356Contig1_05, partial [Pinus radiata]
           gi|383137704|gb|AFG49973.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
           gi|383137706|gb|AFG49974.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
           gi|383137708|gb|AFG49975.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
           gi|383137710|gb|AFG49976.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
           gi|383137712|gb|AFG49977.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
           gi|383137714|gb|AFG49978.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
           gi|383137716|gb|AFG49979.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
           gi|383137718|gb|AFG49980.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
           gi|383137720|gb|AFG49981.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
           gi|383137724|gb|AFG49983.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
           gi|383137726|gb|AFG49984.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
           gi|383137728|gb|AFG49985.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
           gi|383137730|gb|AFG49986.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
           gi|383137732|gb|AFG49987.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
           gi|383137734|gb|AFG49988.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
          Length = 67

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 42/55 (76%), Positives = 45/55 (81%)
 Frame = +3

Query: 3   GLGMLCGSSQEAQEQLAETDGAISMLLSLMRSSDPDIRAITHDLFASLSSSSYVK 167
           GLGMLCGSSQEAQEQLAETD AI  LL LM+SSD DIR I HDLFA+L S+  VK
Sbjct: 12  GLGMLCGSSQEAQEQLAETDRAIGTLLHLMKSSDLDIRGIAHDLFAALCSNKEVK 66


>gb|AFG49982.1| hypothetical protein CL2356Contig1_05, partial [Pinus taeda]
           gi|383137736|gb|AFG49989.1| hypothetical protein
           CL2356Contig1_05, partial [Pinus taeda]
          Length = 67

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 41/55 (74%), Positives = 45/55 (81%)
 Frame = +3

Query: 3   GLGMLCGSSQEAQEQLAETDGAISMLLSLMRSSDPDIRAITHDLFASLSSSSYVK 167
           GLGMLCG+SQEAQEQLAETD AI  LL LM+SSD DIR I HDLFA+L S+  VK
Sbjct: 12  GLGMLCGTSQEAQEQLAETDRAIGTLLHLMKSSDLDIRGIAHDLFAALCSNKEVK 66


>ref|XP_001775093.1| predicted protein [Physcomitrella patens]
           gi|162673544|gb|EDQ60065.1| predicted protein
           [Physcomitrella patens]
          Length = 395

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +3

Query: 3   GLGMLCGSSQEAQEQLAETDGAISMLLSLMRSSDPDIRAITHDLFASL 146
           GLGMLCGSS EAQ QLA  +G +  L++LM+SSD DI++I+ DLF  L
Sbjct: 285 GLGMLCGSSSEAQVQLASVEGTVDTLMALMKSSDHDIKSISRDLFRVL 332


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