BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00012979
         (3003 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera]   108   3e-29
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   112   4e-29
emb|CAN76400.1| hypothetical protein VITISV_001550 [Vitis vinifera]   108   8e-29
emb|CAN71812.1| hypothetical protein VITISV_037409 [Vitis vinifera]   104   4e-28
emb|CAN72141.1| hypothetical protein VITISV_017108 [Vitis vinifera]   107   6e-28
gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]                      104   6e-28
emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]   107   2e-27
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   108   4e-27
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   108   4e-27
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   108   4e-27
emb|CAN72986.1| hypothetical protein VITISV_005624 [Vitis vinifera]   110   4e-27
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   103   5e-27
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]               103   5e-27
gb|EXC35359.1| Retrovirus-related Pol polyprotein from transposo...   104   1e-26
emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]   104   1e-26
ref|XP_006485859.1| PREDICTED: uncharacterized protein LOC102626...   100   1e-26
emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]   102   1e-26
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   103   1e-26
emb|CAN60373.1| hypothetical protein VITISV_034932 [Vitis vinifera]   102   1e-26
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   103   2e-26

>emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera]
          Length = 1248

 Score =  108 bits (269), Expect(2) = 3e-29
 Identities = 50/92 (54%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272  DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
            DG+IE+YKARLVAKG+ Q  GIDY++TF P A M T+ +LL +  N  W++   DVK+AF
Sbjct: 824  DGSIERYKARLVAKGYAQTYGIDYQETFAPVAKMNTVRVLLSLTANYNWDLQQFDVKNAF 883

Query: 92   LHGELEEEVFMSQPLGFEK--GEHVVCKLNKS 3
            LHGELEEE++M  P G++     H+VCKL K+
Sbjct: 884  LHGELEEEIYMEVPPGYDNNLAAHIVCKLKKA 915



 Score = 50.1 bits (118), Expect(2) = 3e-29
 Identities = 20/49 (40%), Positives = 32/49 (65%)
 Frame = -3

Query: 424 IKVALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITKF 278
           +  AL ++  K AM   ++ LE+ KTW+L +LP  KK +GC+W+Y  K+
Sbjct: 773 VSEALTDEKWKQAMNVEMEALEKNKTWELVKLPTGKKPVGCKWVYTVKY 821


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  112 bits (281), Expect(2) = 4e-29
 Identities = 55/91 (60%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
 Frame = -2

Query: 272  DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
            DGTIE+YKARLVAKGF Q EGIDY++TF P A + T+ +LL +A  +GW++  LDV +AF
Sbjct: 1023 DGTIERYKARLVAKGFSQVEGIDYRETFAPVAKLTTVRVLLSLASIQGWHLHQLDVNNAF 1082

Query: 92   LHGELEEEVFMSQPLGF-EKGEHVVCKLNKS 3
            L+G+L E+V+M  P GF  KGEH VCKL+KS
Sbjct: 1083 LNGDLYEDVYMQLPPGFGRKGEHRVCKLHKS 1113



 Score = 45.1 bits (105), Expect(2) = 4e-29
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = -3

Query: 430  KNIKVALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITKF 278
            ++   A+L+   + AM   I  L+  KTW L  LP  KK IGC+W+Y  K+
Sbjct: 970  RSFSQAVLDSRWREAMNTEIQALQANKTWSLVPLPSHKKPIGCKWVYKIKY 1020



 Score = 49.7 bits (117), Expect(2) = 7e-09
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
 Frame = -3

Query: 1849 LHSGCNSHMIGDRIFLKNFISSRDKRRVKTIGIEQLQLRVVEIFLLNFGKNKILLKRKLY 1670
            L SG + H++ D  FL +F    + R VK    +     V  I  ++F   + +L   L 
Sbjct: 407  LDSGASDHIVCDSSFLTSFQPVHN-RIVKLP--DGTSAHVSHIGTVSFSA-QFVLHNVLC 462

Query: 1669 VKGLRKNLISIYLLVVDQFQLVSYQEASGLIQCKITKNGKIIAKGNE*NGLFIM-LPKPT 1493
            V     NLISI  L  D F +  +      IQ    ++GK+I  G E  GL+ + LP+  
Sbjct: 463  VPLFYLNLISISKLAFDSFYVTIFLRQVCFIQD--LQSGKMIGMGTESEGLYCLNLPRKG 520

Query: 1492 ESYLTEEENKNLWHRRLGHISNE 1424
               +   + ++LWH+RLGH S++
Sbjct: 521  TCNVVNTKTQDLWHQRLGHPSSK 543



 Score = 40.0 bits (92), Expect(2) = 7e-09
 Identities = 47/201 (23%), Positives = 71/201 (35%), Gaps = 39/201 (19%)
 Frame = -1

Query: 1392 KEKTI-IKTCENYCEAKMQRNPFSTRSRVTN*TLEIIQSNIFGPIIPQSFGEKR*ILILF 1216
            + KT+ + TC     AK  R PF      ++   ++I  +I+G     S    +  L + 
Sbjct: 552  QNKTLDVSTCSICPLAKHTRTPFPLSVSSSDSCFDLIHVDIWGGYHVPSLSGAQYFLTIV 611

Query: 1215 DEFTKITWCYLLKRKSEA------FENFITFR----------------KKFQIXXXXXXX 1102
            D+ ++ TW YL+  KSEA      F N +  +                K  Q        
Sbjct: 612  DDHSRSTWVYLMHHKSEARSLLVHFVNLVANQFGSQVKIVRSDNGPEFKHTQFYSSRGIL 671

Query: 1101 XXXXXXX*DDQN----------------LLISSKLSNKWCGEACLTATHILNLIRREKIG 970
                      QN                LL  S L   + G+A LTA +++N      + 
Sbjct: 672  HQTSCINTPQQNGVVERKHRHLLNVARALLFQSHLPKPFWGDAILTAAYLINRTPTPLLQ 731

Query: 969  WKIAFELWNKLKPIISHLKSF 907
             K  FE      P  SHL+ F
Sbjct: 732  GKTPFEKLFHKSPNYSHLRVF 752


>emb|CAN76400.1| hypothetical protein VITISV_001550 [Vitis vinifera]
          Length = 626

 Score =  108 bits (271), Expect(2) = 8e-29
 Identities = 50/92 (54%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272 DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
           DG+IE+YKARLVAKG+ Q  GIDY++TF P A M T+ +LL +  N  W++   DVK+AF
Sbjct: 203 DGSIERYKARLVAKGYTQTYGIDYQETFAPIAKMNTVRVLLSLVANYNWDLQQFDVKNAF 262

Query: 92  LHGELEEEVFMSQPLGFEK--GEHVVCKLNKS 3
           LHGELEEE++M  PLG++     H +CKL K+
Sbjct: 263 LHGELEEEIYMEVPLGYDNNLAAHTICKLKKA 294



 Score = 48.1 bits (113), Expect(2) = 8e-29
 Identities = 20/49 (40%), Positives = 31/49 (63%)
 Frame = -3

Query: 424 IKVALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITKF 278
           I  AL ++  K AM   ++ LE+ K W+L +LP  KK +GC+W+Y  K+
Sbjct: 152 ISEALTDEKWKQAMNVEMEALEKNKIWELVKLPTGKKPVGCKWVYTVKY 200


>emb|CAN71812.1| hypothetical protein VITISV_037409 [Vitis vinifera]
          Length = 621

 Score =  104 bits (260), Expect(2) = 4e-28
 Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272 DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
           DG+IE+YKARLVAKG+ Q  GIDY++TF   A M T+ +LL +A N  W++   DVK+AF
Sbjct: 203 DGSIERYKARLVAKGYTQTYGIDYQETFALVAKMNTVRVLLSLAANYNWDLQQFDVKNAF 262

Query: 92  LHGELEEEVFMSQPLGFEK--GEHVVCKLNKS 3
           LHGELEEE++M  P G++     H VCKL K+
Sbjct: 263 LHGELEEEIYMEVPPGYDNNLAAHTVCKLKKA 294



 Score = 50.1 bits (118), Expect(2) = 4e-28
 Identities = 20/49 (40%), Positives = 32/49 (65%)
 Frame = -3

Query: 424 IKVALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITKF 278
           +  AL ++  K AM   ++ LE+ KTW+L +LP  KK +GC+W+Y  K+
Sbjct: 152 VSKALTDEKWKQAMNVEMEALEKNKTWELVKLPTGKKPVGCKWVYTVKY 200


>emb|CAN72141.1| hypothetical protein VITISV_017108 [Vitis vinifera]
          Length = 1416

 Score =  107 bits (266), Expect(2) = 6e-28
 Identities = 54/92 (58%), Positives = 68/92 (73%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272  DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
            DG++E+YKARLVAKGF Q  GIDY++TF P A + +I +LL + VN  W +  LDVK+AF
Sbjct: 959  DGSVERYKARLVAKGFTQTYGIDYQETFAPVAKINSIRVLLSLTVNSNWPLHQLDVKNAF 1018

Query: 92   LHGELEEEVFMSQPLGFEK--GEHVVCKLNKS 3
            L+G+LEEEVFMS P  FE+  G   VCKL KS
Sbjct: 1019 LNGDLEEEVFMSPPPSFEESFGVGKVCKLKKS 1050



 Score = 47.0 bits (110), Expect(2) = 6e-28
 Identities = 19/50 (38%), Positives = 34/50 (68%)
 Frame = -3

Query: 430  KNIKVALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITK 281
            +NI+ AL   + KLA+ K ++ L++  TW+   LP +KK++GC+W++  K
Sbjct: 906  RNIQEALDEPSWKLAVFKEMNALKKNGTWEAVDLPREKKVVGCKWVFTIK 955


>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
          Length = 1180

 Score =  104 bits (259), Expect(2) = 6e-28
 Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272 DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
           DG++++YKARLVAKG+ Q+ G+DY +TF P A + TI +LL +A N  W +   DVK+AF
Sbjct: 724 DGSVDRYKARLVAKGYTQKYGVDYDETFAPVAKINTIRVLLSLAANLDWPLQQFDVKNAF 783

Query: 92  LHGELEEEVFMSQPLGF--EKGEHVVCKLNKS 3
           LHG+L EEV+M  P G+    GE VVCKL KS
Sbjct: 784 LHGDLHEEVYMDLPPGYGTSTGEQVVCKLKKS 815



 Score = 49.7 bits (117), Expect(2) = 6e-28
 Identities = 21/60 (35%), Positives = 35/60 (58%)
 Frame = -3

Query: 460 VEEFSNIEGSKNIKVALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITK 281
           V + S++     ++ A+ ++    AM   +D LE+  TW+L  LP+ KK +GCRW+Y  K
Sbjct: 661 VNQLSSVSLPSKVQDAMKDEKWMKAMTVEMDALEKNCTWELVSLPQGKKTVGCRWVYTVK 720



 Score = 45.8 bits (107), Expect(2) = 8e-06
 Identities = 22/76 (28%), Positives = 37/76 (48%)
 Frame = -1

Query: 1368 CENYCEAKMQRNPFSTRSRVTN*TLEIIQSNIFGPIIPQSFGEKR*ILILFDEFTKITWC 1189
            CE    AK  R+ + +    +    E+I S+++GP    +    R  ++  D+FT+++W 
Sbjct: 213  CETCALAKSHRSSYPSSFHSSTMPFELIHSDVWGPSKHSTLSGMRYFVLFIDDFTRLSWV 272

Query: 1188 YLLKRKSEAFENFITF 1141
             LLK K   F  F  F
Sbjct: 273  VLLKSKDSVFSAFRAF 288



 Score = 33.5 bits (75), Expect(2) = 8e-06
 Identities = 49/192 (25%), Positives = 76/192 (39%), Gaps = 15/192 (7%)
 Frame = -3

Query: 1942 NISEGNVA---EITNKQYYVLFNNDDKKPKNS*FLHSGCNSHMIGDRIFLKNFISSRDKR 1772
            ++SEGNV+   E   K  + L    D    ++  + SG + HM  D+ F  +  S     
Sbjct: 13   DLSEGNVSLTKETRGKIGFAL-QVSDFTGSDTWIIDSGASDHMTYDKSFFVSMSSPSISH 71

Query: 1771 RVKTIGIEQLQLRVVEIFLLNFGKNKILLKRKLYVKGLRKNLISIYLLVVDQFQLVSYQE 1592
                 G+    L +  I +       I+L   LYV  L  +L+S+  L       V++  
Sbjct: 72   VSNANGVSFPVLGIGSIQVTP----SIVLHDVLYVPSLSHHLLSVSQLNSQNKCSVTFYP 127

Query: 1591 ASGLIQCKITKNGKIIAKGNE*NGLF---------IMLPKPTESYLTEEENKN---LWHR 1448
               + Q     N  II KG+    LF         I  P+   +     +  +   LWHR
Sbjct: 128  MYVVFQNLC--NRMIIGKGDLRGRLFHLDCMYAGQIQAPEQPLTLTLSSDRLSEVWLWHR 185

Query: 1447 RLGHISNEYLKR 1412
            RLGH S   +K+
Sbjct: 186  RLGHPSFRVMKK 197


>emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]
          Length = 1493

 Score =  107 bits (266), Expect(2) = 2e-27
 Identities = 55/92 (59%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272  DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
            DGT+E+YKARLVAKGF Q  GIDY +TF P A + TI +LL +A N  W +   D+K+AF
Sbjct: 1038 DGTVERYKARLVAKGFTQTYGIDYTETFAPVAKLNTIRVLLSLAANLDWPLHQFDIKNAF 1097

Query: 92   LHGELEEEVFMSQPLGF--EKGEHVVCKLNKS 3
            L+GELEEEVFM  P GF  E+ E  VCKL KS
Sbjct: 1098 LNGELEEEVFMMLPPGFCKEEEETRVCKLKKS 1129



 Score = 45.1 bits (105), Expect(2) = 2e-27
 Identities = 21/55 (38%), Positives = 33/55 (60%)
 Frame = -3

Query: 442  IEGSKNIKVALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITKF 278
            I+  KNI+ A      K A+ + I  LE+ +TW++  LP  KK +GC+WI+  K+
Sbjct: 981  IQLPKNIQEAFEIPEWKEAVMEEIRALEKNETWEVMNLPRGKKPVGCKWIFTVKY 1035


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 1621

 Score =  108 bits (270), Expect(2) = 4e-27
 Identities = 54/92 (58%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272 DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
           DGT+++YKARLVAKGF Q  GIDY+ TF P     TI ++L +AV+KGW++  LDV++AF
Sbjct: 721 DGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAF 780

Query: 92  LHGELEEEVFMSQPLGFE--KGEHVVCKLNKS 3
           LHG LEEEV+M QP GFE     H VCKL+K+
Sbjct: 781 LHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKA 812



 Score = 42.7 bits (99), Expect(2) = 4e-27
 Identities = 19/45 (42%), Positives = 27/45 (60%)
 Frame = -3

Query: 415 ALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITK 281
           AL ++N KLAM+   D L + KTW L      + +IGC+W+Y  K
Sbjct: 673 ALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIK 717


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  108 bits (270), Expect(2) = 4e-27
 Identities = 54/92 (58%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272  DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
            DGT+++YKARLVAKGF Q  GIDY+ TF P     TI ++L +AV+KGW++  LDV++AF
Sbjct: 992  DGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAF 1051

Query: 92   LHGELEEEVFMSQPLGFE--KGEHVVCKLNKS 3
            LHG LEEEV+M QP GFE     H VCKL+K+
Sbjct: 1052 LHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKA 1083



 Score = 42.7 bits (99), Expect(2) = 4e-27
 Identities = 19/45 (42%), Positives = 27/45 (60%)
 Frame = -3

Query: 415  ALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITK 281
            AL ++N KLAM+   D L + KTW L      + +IGC+W+Y  K
Sbjct: 944  ALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIK 988


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  108 bits (270), Expect(2) = 4e-27
 Identities = 54/92 (58%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272  DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
            DGT+++YKARLVAKGF Q  GIDY+ TF P     TI ++L +AV+KGW++  LDV++AF
Sbjct: 999  DGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAF 1058

Query: 92   LHGELEEEVFMSQPLGFE--KGEHVVCKLNKS 3
            LHG LEEEV+M QP GFE     H VCKL+K+
Sbjct: 1059 LHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKA 1090



 Score = 42.7 bits (99), Expect(2) = 4e-27
 Identities = 19/45 (42%), Positives = 27/45 (60%)
 Frame = -3

Query: 415  ALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITK 281
            AL ++N KLAM+   D L + KTW L      + +IGC+W+Y  K
Sbjct: 951  ALKDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIK 995



 Score = 58.2 bits (139), Expect(2) = 1e-11
 Identities = 28/77 (36%), Positives = 46/77 (59%)
 Frame = -1

Query: 1368 CENYCEAKMQRNPFSTRSRVTN*TLEIIQSNIFGPIIPQSFGEKR*ILILFDEFTKITWC 1189
            C    +AK  + PF   S V+   LE++ S+++GP  P+S G K+  +   D+F+K TW 
Sbjct: 485  CNACQQAKSHQLPFPISSSVSKHPLELVFSDVWGPA-PESVGRKKYYVSFIDDFSKFTWI 543

Query: 1188 YLLKRKSEAFENFITFR 1138
            YL++ KS+ F+ F  F+
Sbjct: 544  YLIQHKSQVFDKFQEFQ 560



 Score = 40.8 bits (94), Expect(2) = 1e-11
 Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
 Frame = -3

Query: 1852 FLHSGCNSHMIG--DRIFLKNFISSRDKRRVKTIGIEQLQLRVVEIFLLNFGKNKILLKR 1679
            ++ +G   H+ G  D++ +K   +  ++    + G       +    + N     I L+ 
Sbjct: 321  YIDTGATDHVTGELDKLTMKEKYNGGEQIHTAS-GAGMDISHIGHAIVHNPNSRNIHLRN 379

Query: 1678 KLYVKGLRKNLISIYLLVVDQFQLVSYQEASGLIQCKITKNGKIIAKGNE*NGLFIMLPK 1499
             LYV   +KNL+S++ LV D    +        ++ +IT+  K + KG     L+  LP 
Sbjct: 380  VLYVPQAKKNLVSVHRLVNDNSAFLELHRDYFFLKDQITR--KTLLKGRSWRRLY-PLPH 436

Query: 1498 PT--ESYLTEEENKNLWHRRLGHISNEYLKRI 1409
             +  ++Y   + + + WH RLGH S   +K++
Sbjct: 437  SSLKQAYSAIKLSLDRWHHRLGHPSITTVKQV 468


>emb|CAN72986.1| hypothetical protein VITISV_005624 [Vitis vinifera]
          Length = 761

 Score =  110 bits (276), Expect(2) = 4e-27
 Identities = 56/92 (60%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272 DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
           DG++E+YKARLVAKGF Q  GIDY++TF P A + +I +LL +AVN  W +  LDVK+AF
Sbjct: 399 DGSVERYKARLVAKGFTQTYGIDYQETFTPVAKINSIRVLLSLAVNSNWPLHQLDVKNAF 458

Query: 92  LHGELEEEVFMSQPLGFEK--GEHVVCKLNKS 3
           L+G+LEEEVFMS P GFE+  G   VCKL KS
Sbjct: 459 LNGDLEEEVFMSPPPGFEESFGVGKVCKLKKS 490



 Score = 40.4 bits (93), Expect(2) = 4e-27
 Identities = 17/50 (34%), Positives = 33/50 (66%)
 Frame = -3

Query: 430 KNIKVALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITK 281
           +NI+ AL   + KLA+ + ++ L++  TW++  LP +KK++G +W +  K
Sbjct: 346 RNIQEALDEPSWKLAVFEEMNALKKNGTWEVVDLPREKKVVGYKWAFTIK 395


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
          Length = 1334

 Score =  103 bits (257), Expect(2) = 5e-27
 Identities = 50/91 (54%), Positives = 66/91 (72%), Gaps = 2/91 (2%)
 Frame = -2

Query: 269  GTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAFL 90
            G ++K+KARLVAKG+HQ  G+D+ + F P A   TI ++L +A  KGW+VF LDVKSAFL
Sbjct: 881  GEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFL 940

Query: 89   HGELEEEVFMSQPLGFEKGEH--VVCKLNKS 3
            HG+L+E+VF+ QP GFE  E    V KL K+
Sbjct: 941  HGDLKEDVFVEQPKGFEVEEESSKVYKLKKA 971



 Score = 47.4 bits (111), Expect(2) = 5e-27
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
 Frame = -3

Query: 682  EEEPKKINQEIRLFIELDDISLPLEGTSKEYMSY*RPLWYKNTIKNTN--LPFQNNQEEI 509
            +++ ++  +E     E    +LP  GT        +P+W K+ +      L  Q+ ++E+
Sbjct: 758  QQDQEETEEEEETVAETVHQNLPAVGTGGVRQRQ-QPVWMKDYVVGNARVLITQDEEDEV 816

Query: 508  LRWARKKLQEQEIECCVEEFSNIEGSKNIKVALLNQN*KLAMEKYIDMLERRKTWDLKQL 329
            L          +   C EE + +E  +             AME  I  +E   TW+L +L
Sbjct: 817  LAL----FIGPDDPVCFEEAAQLEVWRK------------AMEAEITSIEENNTWELVEL 860

Query: 328  PEDKKLIGCRWIYITKF 278
            PE+ K+IG +WI+ TKF
Sbjct: 861  PEEAKVIGLKWIFKTKF 877


>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
          Length = 1207

 Score =  103 bits (257), Expect(2) = 5e-27
 Identities = 50/91 (54%), Positives = 66/91 (72%), Gaps = 2/91 (2%)
 Frame = -2

Query: 269  GTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAFL 90
            G ++K+KARLVAKG+HQ  G+D+ + F P A   TI ++L +A  KGW+VF LDVKSAFL
Sbjct: 786  GEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFL 845

Query: 89   HGELEEEVFMSQPLGFEKGEH--VVCKLNKS 3
            HG+L+E+VF+ QP GFE  E    V KL K+
Sbjct: 846  HGDLKEDVFVEQPKGFEVEEESSKVYKLKKA 876



 Score = 47.4 bits (111), Expect(2) = 5e-27
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
 Frame = -3

Query: 682  EEEPKKINQEIRLFIELDDISLPLEGTSKEYMSY*RPLWYKNTIKNTN--LPFQNNQEEI 509
            +++ ++  +E     E    +LP  GT        +P+W K+ +      L  Q+ ++E+
Sbjct: 663  QQDQEETEEEEETVAETVHQNLPAVGTGGVRQRQ-QPVWMKDYVVGNARVLITQDEEDEV 721

Query: 508  LRWARKKLQEQEIECCVEEFSNIEGSKNIKVALLNQN*KLAMEKYIDMLERRKTWDLKQL 329
            L          +   C EE + +E  +             AME  I  +E   TW+L +L
Sbjct: 722  LAL----FIGPDDPVCFEEAAQLEVWRK------------AMEAEITSIEENNTWELVEL 765

Query: 328  PEDKKLIGCRWIYITKF 278
            PE+ K+IG +WI+ TKF
Sbjct: 766  PEEAKVIGLKWIFKTKF 782


>gb|EXC35359.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
            notabilis]
          Length = 3263

 Score =  104 bits (259), Expect(2) = 1e-26
 Identities = 51/92 (55%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272  DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
            DG++E++KARLVA+GF Q  GIDY++TF P A + TI +LL +AVN+ W +  LD+K+AF
Sbjct: 1030 DGSVERFKARLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAF 1089

Query: 92   LHGELEEEVFMSQPLGFEKG--EHVVCKLNKS 3
            L+G+LEEEV+M  P GFE    ++ VCKL KS
Sbjct: 1090 LNGDLEEEVYMEIPPGFEGSMTKNQVCKLRKS 1121



 Score = 45.4 bits (106), Expect(2) = 1e-26
 Identities = 20/49 (40%), Positives = 29/49 (59%)
 Frame = -3

Query: 424  IKVALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITKF 278
            I  AL N   K A++  ID LE+  TW +  LP  K+ +GC+WI+  K+
Sbjct: 979  IHEALQNSEWKKAVQDEIDALEKNGTWTITDLPGGKRPVGCKWIFTIKY 1027


>emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]
          Length = 1246

 Score =  104 bits (259), Expect(2) = 1e-26
 Identities = 46/91 (50%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
 Frame = -2

Query: 269  GTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAFL 90
            G ++KYKARLVAKG+ Q++G+D+ K + P A M T+ M++ +   +GW ++ LDVKSAFL
Sbjct: 806  GEVDKYKARLVAKGYSQQQGVDFTKIYAPVARMDTVRMIVALTAQRGWTIYQLDVKSAFL 865

Query: 89   HGELEEEVFMSQPLGFEK--GEHVVCKLNKS 3
            +GEL E+V++ QP G+EK   EH V KL+K+
Sbjct: 866  NGELNEDVYVDQPKGYEKKGSEHKVYKLHKA 896



 Score = 45.4 bits (106), Expect(2) = 1e-26
 Identities = 25/71 (35%), Positives = 40/71 (56%)
 Frame = -3

Query: 493 KKLQEQEIECCVEEFSNIEGSKNIKVALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKK 314
           K L E EIE  +   ++ +   N +  +++   +LAM+  I+ +E+ +TW L  LP   K
Sbjct: 732 KGLSEGEIELNMALVASTDPI-NYEEVVMSSKWRLAMDSEINSIEKNQTWKLTDLPTGAK 790

Query: 313 LIGCRWIYITK 281
            IG +WIY TK
Sbjct: 791 TIGVKWIYKTK 801



 Score = 58.2 bits (139), Expect(2) = 4e-09
 Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 2/156 (1%)
 Frame = -1

Query: 1368 CENYCEAKMQRNPFSTRS--RVTN*TLEIIQSNIFGPIIPQSFGEKR*ILILFDEFTKIT 1195
            C +    K  R+P   +S  R T   L++I +NI GP+ P S G+KR  L   D+F++ T
Sbjct: 435  CTDCLNGKQHRDPIPKKSAWRATK-KLQLIHANICGPVTPTSNGKKRYALCFIDDFSRKT 493

Query: 1194 WCYLLKRKSEAFENFITFRKKFQIXXXXXXXXXXXXXX*DDQNLLISSKLSNKWCGEACL 1015
            W Y L  KS+A  +F  F++  +                 D+      K+   +  EA  
Sbjct: 494  WVYFLVEKSKALNSFKCFKRLVE-----KETGMYIKCLRTDRG---EKKIPKTFWPEAVN 545

Query: 1014 TATHILNLIRREKIGWKIAFELWNKLKPIISHLKSF 907
               ++LN      +      E W+ +KP + H + F
Sbjct: 546  WTMYVLNRSPIVAVKNVTPEEAWSGVKPTVEHFRVF 581



 Score = 32.3 bits (72), Expect(2) = 4e-09
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
 Frame = -3

Query: 1852 FLHSGCNSHMIGD-RIFLKNFISSRDKRRVKTIGIEQLQLRVVEIFLLNFGKNKILLKRK 1676
            FL  GC++HM GD R+F +  +    +++VK     ++ ++      L       +L   
Sbjct: 300  FLDFGCSNHMCGDARMFSE--LDESFRQQVKLGNNSKITVKGRGNVRLQLNGFNYVLTVV 357

Query: 1675 LYVKGLRKNLISIYLLVVDQFQLVSYQEASGLIQCKITKNGKIIAKGNE*NGLFIMLPKP 1496
             YV  L+ NL+SI  L   Q + ++     GL +      G II      N +F +L   
Sbjct: 358  FYVPELKNNLLSIGQL---QEKGLAIMIHDGLCKIYHPNKGLIIQTAMSTNRMFTLLAN- 413

Query: 1495 TESYLTEEENKNLWH 1451
                  +E+N+N+ H
Sbjct: 414  -----KQEKNENMVH 423


>ref|XP_006485859.1| PREDICTED: uncharacterized protein LOC102626627 [Citrus sinensis]
          Length = 1081

 Score =  100 bits (248), Expect(2) = 1e-26
 Identities = 52/93 (55%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
 Frame = -2

Query: 272 DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
           DG+IE+YKARLVAKG+ Q  GIDY  TF P A + TI +LL +AVN  W V   DVK+AF
Sbjct: 665 DGSIERYKARLVAKGYTQTYGIDYTDTFAPVAKINTIRILLSLAVNLDWPVQQFDVKNAF 724

Query: 92  LHGELEEEVFMSQPLGFEKGEHV---VCKLNKS 3
           LHG+L EE++M  P G    E +   VCKL KS
Sbjct: 725 LHGDLSEEIYMDLPPGCSGPERLNQKVCKLKKS 757



 Score = 49.7 bits (117), Expect(2) = 1e-26
 Identities = 22/61 (36%), Positives = 36/61 (59%)
 Frame = -3

Query: 460 VEEFSNIEGSKNIKVALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITK 281
           V + S +    +++ AL +   K+AM   +  L++ +TW+L  LP  KK +GCRWIY  K
Sbjct: 602 VNQLSAVSIPNSVQEALKDPKWKVAMNDEMRSLQKNQTWELVDLPPGKKPVGCRWIYTIK 661

Query: 280 F 278
           +
Sbjct: 662 Y 662


>emb|CAN80566.1| hypothetical protein VITISV_029672 [Vitis vinifera]
          Length = 1636

 Score =  102 bits (253), Expect(2) = 1e-26
 Identities = 49/92 (53%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272  DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
            DG +++YKARLVAKGF Q  GIDY++TF P A + T+ +LL +A N  W++  LDVK+AF
Sbjct: 961  DGNVDRYKARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAANLDWSLHQLDVKNAF 1020

Query: 92   LHGELEEEVFMSQPLGFEKGEHV--VCKLNKS 3
            L+G+LEEEV+M  P G E   +   VC+L KS
Sbjct: 1021 LNGDLEEEVYMDIPAGLETTSNFNKVCRLRKS 1052



 Score = 47.4 bits (111), Expect(2) = 1e-26
 Identities = 19/59 (32%), Positives = 34/59 (57%)
 Frame = -3

Query: 454  EFSNIEGSKNIKVALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITKF 278
            + + I+  +NI+ A      K  + + +  LE+  TW++  LP  KKL+GC+WI+  K+
Sbjct: 900  DITEIQVPQNIQEAFKYPKWKAVVNEEVRALEKNGTWEITDLPRGKKLVGCKWIFTVKY 958



 Score = 40.4 bits (93), Expect(2) = 6e-06
 Identities = 23/81 (28%), Positives = 40/81 (49%)
 Frame = -1

Query: 1368 CENYCEAKMQRNPFSTRSRVTN*TLEIIQSNIFGPIIPQSFGEKR*ILILFDEFTKITWC 1189
            CE    +K  R+ F  +    +    +I S+I+GP   ++    R  +   D+ T++TW 
Sbjct: 550  CEICQLSKQVRSHFPIQPYKESSPFSMIHSDIWGPSRIKNVTGTRWFVSFIDDHTRLTWV 609

Query: 1188 YLLKRKSEAFENFITFRKKFQ 1126
            +L+K KSE  + F  F+   Q
Sbjct: 610  FLMKEKSETSQIFKNFKNMIQ 630



 Score = 39.3 bits (90), Expect(2) = 6e-06
 Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 15/170 (8%)
 Frame = -3

Query: 1873 KKPKNS*FLHSGCNSHMIGDRIFLKNFISSRDKRRVKTIGIEQLQLRVVEIFLLNFGKNK 1694
            KK K    + SG + HM GD      + S  +   V+       ++      +L+     
Sbjct: 372  KKRKKPWIVDSGASDHMTGDATIFDTYSSCPNNLTVRIADGSLSKVAGTGSVVLS---RD 428

Query: 1693 ILLKRKLYVKGLRKNLISIYLLVVDQFQLVSYQEASGLIQCKITKNGKIIAKGNE*NGLF 1514
            + L   L V  L  NL+SI  L  ++  + ++  +S   + +   +GK I    E +GL+
Sbjct: 429  LTLNFVLLVPNLDCNLLSISKLTKEKRCITNF--SSTHCEFQDLDSGKTIGNAEECSGLY 486

Query: 1513 IMLPK--PTE---------SYLTEEENKN----LWHRRLGHISNEYLKRI 1409
            I+  +  P E         S+    +N +    LWH RLGH +  YLK +
Sbjct: 487  ILKERHDPQEQPQMTVGSNSFSVSCQNNDSAIRLWHYRLGHPNVMYLKHL 536


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
            gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1334

 Score =  103 bits (257), Expect(2) = 1e-26
 Identities = 50/91 (54%), Positives = 66/91 (72%), Gaps = 2/91 (2%)
 Frame = -2

Query: 269  GTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAFL 90
            G ++K+KARLVAKG+HQ  G+D+ + F P A   TI ++L +A  KGW+VF LDVKSAFL
Sbjct: 881  GEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFL 940

Query: 89   HGELEEEVFMSQPLGFEKGEH--VVCKLNKS 3
            HG+L+E+VF+ QP GFE  E    V KL K+
Sbjct: 941  HGDLKEDVFVEQPKGFEVEEESSKVYKLKKA 971



 Score = 45.8 bits (107), Expect(2) = 1e-26
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -3

Query: 388 AMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITKF 278
           AME  I  +E   TW+L +LPE+ K+IG +WI+ TKF
Sbjct: 841 AMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKF 877


>emb|CAN60373.1| hypothetical protein VITISV_034932 [Vitis vinifera]
          Length = 1264

 Score =  102 bits (253), Expect(2) = 1e-26
 Identities = 49/92 (53%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272  DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
            DG +++YKARLVAKGF Q  GIDY++TF P A + T+ +LL +A N  W++  LDVK+AF
Sbjct: 816  DGNVDRYKARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAANLDWSLHQLDVKNAF 875

Query: 92   LHGELEEEVFMSQPLGFEKGEHV--VCKLNKS 3
            L+G+LEEEV+M  P G E   +   VC+L KS
Sbjct: 876  LNGDLEEEVYMDIPAGLEMTSNFNKVCRLQKS 907



 Score = 47.4 bits (111), Expect(2) = 1e-26
 Identities = 19/59 (32%), Positives = 35/59 (59%)
 Frame = -3

Query: 454 EFSNIEGSKNIKVALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITKF 278
           + + I+  +NI+ A      K A+++ +  LE+  TW++  LP  KK +GC+WI+  K+
Sbjct: 755 DITEIQVPRNIQEAFKYPKWKAAVDEEVRALEKNGTWEITNLPRGKKPVGCKWIFTVKY 813


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  103 bits (257), Expect(2) = 2e-26
 Identities = 47/92 (51%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272  DGTIEKYKARLVAKGFHQEEGIDYKKTFVPTASMKTI*MLLKIAVNKGWNVFHLDVKSAF 93
            DGT++KYKARLVAKGFHQ+ G D+ +TF P     T+ ++  IA+++ W +  LDV +AF
Sbjct: 991  DGTVQKYKARLVAKGFHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAF 1050

Query: 92   LHGELEEEVFMSQPLGF--EKGEHVVCKLNKS 3
            L+G+L+EEVFM QP GF  E+  ++VC+L+K+
Sbjct: 1051 LNGDLQEEVFMQQPQGFIDEQNPNLVCRLHKA 1082



 Score = 45.4 bits (106), Expect(2) = 2e-26
 Identities = 21/54 (38%), Positives = 28/54 (51%)
 Frame = -3

Query: 442  IEGSKNIKVALLNQN*KLAMEKYIDMLERRKTWDLKQLPEDKKLIGCRWIYITK 281
            I    ++  AL     K AM    D L+R  TW L  LP  ++ IGC+W+Y TK
Sbjct: 934  IREPSSVSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWVYKTK 987



 Score = 53.5 bits (127), Expect(2) = 2e-09
 Identities = 25/82 (30%), Positives = 44/82 (53%)
 Frame = -1

Query: 1368 CENYCEAKMQRNPFSTRSRVTN*TLEIIQSNIFGPIIPQSFGEKR*ILILFDEFTKITWC 1189
            C + C  K+ R PFS         LE+I  +++GP +  S    R  +   D F++ +W 
Sbjct: 556  CSSCCLGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWI 615

Query: 1188 YLLKRKSEAFENFITFRKKFQI 1123
            +LL+ KSEA + F+ F+ + ++
Sbjct: 616  FLLRNKSEAIKTFVNFKTQVEL 637



 Score = 38.1 bits (87), Expect(2) = 2e-09
 Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 28/242 (11%)
 Frame = -3

Query: 2050 CHICDTNRHDTKRCFFNSKGSNYKP-HLKPRDKSPANNIS---EGNVAEITNKQYYVLFN 1883
            C +C    H   +C++    +   P +L  R+ SP    S   + N    T++    +F+
Sbjct: 310  CQLCGKIGHVVAQCYYRFDHTFQVPQNLSSRNSSPRAYYSFSPQVNGVIPTSE----VFS 365

Query: 1882 NDDKKPKNS*FLHSGCNSHMIGDRIFLKNFISSRDKRRVKTIGIEQLQLRVV--EIFLLN 1709
            +D+  P       SG ++H+  +   L        + +V       L ++ +    FL  
Sbjct: 366  DDNWYPD------SGASNHVTPNPENLMKSAEFAGQNQVHVGNGTGLSIKHIGQSEFLSP 419

Query: 1708 FGKNKILLKRKLYVKGLRKNLISIYLLVVDQFQLVSYQEASGLIQCKITKNGKIIAKGNE 1529
            F    +LL   L+V  + KNL+S+     D      +   S  ++ ++T+   ++  G  
Sbjct: 420  FSSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCFVKDQVTQ--AVLMVGKV 477

Query: 1528 *NGLFI-----MLPKPTESYLTE-----------------EENKNLWHRRLGHISNEYLK 1415
             +GL+      +  +PT+S                         +LWH+RLGH S   +K
Sbjct: 478  RDGLYAFDSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTFDLWHKRLGHPSAATIK 537

Query: 1414 RI 1409
             +
Sbjct: 538  NV 539