BLASTX nr result
ID: Ephedra25_contig00012976
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00012976
(421 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK25034.1| unknown [Picea sitchensis] 69 5e-10
gb|ABK24932.1| unknown [Picea sitchensis] 69 6e-10
ref|XP_002881346.1| transketolase family protein [Arabidopsis ly... 61 1e-07
ref|XP_002305328.1| PYRUVATE DEHYDROGENASE E1 BETA family protei... 60 2e-07
ref|XP_006355008.1| PREDICTED: pyruvate dehydrogenase E1 compone... 60 3e-07
ref|XP_006346842.1| PREDICTED: pyruvate dehydrogenase E1 compone... 60 3e-07
ref|XP_006410606.1| hypothetical protein EUTSA_v10016731mg [Eutr... 60 3e-07
ref|NP_181006.1| pyruvate dehydrogenase E1 component subunit bet... 60 3e-07
gb|AAM65328.1| putative pyruvate dehydrogenase E1 beta subunit [... 60 3e-07
ref|XP_004162812.1| PREDICTED: pyruvate dehydrogenase E1 compone... 59 5e-07
gb|AEW31333.1| putative plastidial pyruvate dehydrogenase E1 bet... 59 5e-07
ref|XP_004236890.1| PREDICTED: pyruvate dehydrogenase E1 compone... 59 9e-07
ref|XP_004244808.1| PREDICTED: pyruvate dehydrogenase E1 compone... 58 1e-06
ref|XP_002324031.1| PYRUVATE DEHYDROGENASE E1 BETA family protei... 58 1e-06
gb|ACF17670.1| putative pyruvate dehydrogenase E1 beta subunit [... 58 1e-06
ref|XP_004149671.1| PREDICTED: pyruvate dehydrogenase E1 compone... 57 2e-06
ref|XP_003633031.1| PREDICTED: LOW QUALITY PROTEIN: pyruvate deh... 57 3e-06
emb|CAN79920.1| hypothetical protein VITISV_002109 [Vitis vinifera] 57 3e-06
gb|EXC29338.1| Pyruvate dehydrogenase E1 component subunit beta ... 57 3e-06
emb|CBI28658.3| unnamed protein product [Vitis vinifera] 56 4e-06
>gb|ABK25034.1| unknown [Picea sitchensis]
Length = 407
Score = 69.3 bits (168), Expect = 5e-10
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Frame = +1
Query: 136 LAMAATGLSSF--AIPSSHKSQPGFFHRFSQLDSKRLTVNGSVNPRWQHSVNVKKQVSKL 309
+A G+++ + SS++ Q GF + KR ++ ++ + S N +K+ SKL
Sbjct: 6 MAQGVGGITALMPSFSSSNRLQLGFSKHLPEW--KRSSIAIRLDASFSQSSNSRKRASKL 63
Query: 310 VTHATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
VT A KDE S +SK+GHELLLFEALREGLDEE
Sbjct: 64 VTSAVVVKDETATSPATSKTGHELLLFEALREGLDEE 100
>gb|ABK24932.1| unknown [Picea sitchensis]
Length = 407
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +1
Query: 178 SSHKSQPGFFHRFSQLDSKRLTVNGSVNPRWQHSVNVKKQVSKLVTHATAAKDEVTASST 357
SS++ Q GF + + + ++ + S N +K+ SKLVT A KDE S+
Sbjct: 22 SSNRLQLGFSKHLPEWKGSSIVIR--LDASFSQSSNSRKRASKLVTSAVVVKDETATSAA 79
Query: 358 SSKSGHELLLFEALREGLDEE 420
+SK+GHELLLFEALREGLDEE
Sbjct: 80 TSKTGHELLLFEALREGLDEE 100
>ref|XP_002881346.1| transketolase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297327185|gb|EFH57605.1| transketolase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 409
Score = 61.2 bits (147), Expect = 1e-07
Identities = 44/95 (46%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +1
Query: 139 AMAATGLSSF-AIPSSHKSQPGFFHRFSQLDSKRLTVNGSVNPRWQHSVNVKKQVSKLVT 315
A AAT LS F +I S P + SKR V GS + + S+ V++ L+
Sbjct: 11 AGAATALSPFNSIDPSKLVVPS--RSSLSVRSKRYVVAGSDSKSFGSSLIVRRS-EPLIP 67
Query: 316 HATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
+A +AK + ASSTSSK GHELLLFEAL+EGL+EE
Sbjct: 68 NAVSAKADTAASSTSSKPGHELLLFEALQEGLEEE 102
>ref|XP_002305328.1| PYRUVATE DEHYDROGENASE E1 BETA family protein [Populus trichocarpa]
gi|118482251|gb|ABK93053.1| unknown [Populus
trichocarpa] gi|222848292|gb|EEE85839.1| PYRUVATE
DEHYDROGENASE E1 BETA family protein [Populus
trichocarpa]
Length = 418
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +1
Query: 247 NGSVNPRWQHSVNVKKQVSKLVTHATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
+GS+N S + V KL+T+A A K + +A+S++SK GHELLLFEALREGL+EE
Sbjct: 51 DGSLNLNLGSSNGRARTVDKLITNAVATKADTSAASSASKPGHELLLFEALREGLEEE 108
>ref|XP_006355008.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-3,
chloroplastic-like [Solanum tuberosum]
Length = 411
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/42 (66%), Positives = 36/42 (85%)
Frame = +1
Query: 295 QVSKLVTHATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
+ +L+T+A AAK++ A+STSSK GHELLLFEALREGL+EE
Sbjct: 63 RAEQLITNAVAAKEDTAAASTSSKPGHELLLFEALREGLEEE 104
>ref|XP_006346842.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-3,
chloroplastic-like [Solanum tuberosum]
Length = 408
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/42 (66%), Positives = 36/42 (85%)
Frame = +1
Query: 295 QVSKLVTHATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
+ +L+T+A AAK++ A+STSSK GHELLLFEALREGL+EE
Sbjct: 60 RAEQLITNAVAAKEDAAAASTSSKPGHELLLFEALREGLEEE 101
>ref|XP_006410606.1| hypothetical protein EUTSA_v10016731mg [Eutrema salsugineum]
gi|557111775|gb|ESQ52059.1| hypothetical protein
EUTSA_v10016731mg [Eutrema salsugineum]
Length = 411
Score = 60.1 bits (144), Expect = 3e-07
Identities = 43/94 (45%), Positives = 54/94 (57%)
Frame = +1
Query: 139 AMAATGLSSFAIPSSHKSQPGFFHRFSQLDSKRLTVNGSVNPRWQHSVNVKKQVSKLVTH 318
A AAT LS F S+K S + SKR GS + S ++ +L+ +
Sbjct: 12 AGAATALSPFNSIDSNKPVAPSRSSLS-VRSKRYIAAGSDGIKSFGSGLKARRSEQLIVN 70
Query: 319 ATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
A A K + ASSTSSKSGHELLLFEAL+EGL+EE
Sbjct: 71 AVATKADKAASSTSSKSGHELLLFEALQEGLEEE 104
>ref|NP_181006.1| pyruvate dehydrogenase E1 component subunit beta [Arabidopsis
thaliana] gi|75219835|sp|O64688.1|ODPB3_ARATH RecName:
Full=Pyruvate dehydrogenase E1 component subunit beta-3,
chloroplastic; Flags: Precursor
gi|5702375|gb|AAD47282.1|AF167983_1 putative pyruvate
dehydrogenase beta subunit [Arabidopsis thaliana]
gi|3128205|gb|AAC26685.1| putative pyruvate
dehydrogenase E1 beta subunit [Arabidopsis thaliana]
gi|109134117|gb|ABG25057.1| At2g34590 [Arabidopsis
thaliana] gi|330253902|gb|AEC08996.1| pyruvate
dehydrogenase E1 component subunit beta [Arabidopsis
thaliana]
Length = 406
Score = 60.1 bits (144), Expect = 3e-07
Identities = 43/94 (45%), Positives = 55/94 (58%)
Frame = +1
Query: 139 AMAATGLSSFAIPSSHKSQPGFFHRFSQLDSKRLTVNGSVNPRWQHSVNVKKQVSKLVTH 318
A AAT LS F S+K S + SKR V GS + + S+ V ++ L+ +
Sbjct: 8 AGAATALSPFNSIDSNKLVAPSRSSLS-VRSKRYIVAGSDSKSFGSSL-VARRSEPLIPN 65
Query: 319 ATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
A K + ASSTSSK GHELLLFEAL+EGL+EE
Sbjct: 66 AVTTKADTAASSTSSKPGHELLLFEALQEGLEEE 99
>gb|AAM65328.1| putative pyruvate dehydrogenase E1 beta subunit [Arabidopsis
thaliana]
Length = 406
Score = 60.1 bits (144), Expect = 3e-07
Identities = 43/94 (45%), Positives = 55/94 (58%)
Frame = +1
Query: 139 AMAATGLSSFAIPSSHKSQPGFFHRFSQLDSKRLTVNGSVNPRWQHSVNVKKQVSKLVTH 318
A AAT LS F S+K S + SKR V GS + + S+ V ++ L+ +
Sbjct: 8 AGAATALSPFNSIDSNKLVAPSRSSLS-VRSKRYIVAGSDSKSFGSSL-VARRSEPLIPN 65
Query: 319 ATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
A K + ASSTSSK GHELLLFEAL+EGL+EE
Sbjct: 66 AVTTKADTAASSTSSKPGHELLLFEALQEGLEEE 99
>ref|XP_004162812.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like
[Cucumis sativus]
Length = 677
Score = 59.3 bits (142), Expect = 5e-07
Identities = 35/82 (42%), Positives = 47/82 (57%)
Frame = +1
Query: 175 PSSHKSQPGFFHRFSQLDSKRLTVNGSVNPRWQHSVNVKKQVSKLVTHATAAKDEVTASS 354
PS P FF R + R V G+ H+ + + L+T+A A K + ++ S
Sbjct: 294 PSPPFQIPLFFERKGRFFIVRSDVTGA-----NHAFTPRSRSHHLITNAVATKADTSSPS 348
Query: 355 TSSKSGHELLLFEALREGLDEE 420
T+SK GHELLLFEALREGL+EE
Sbjct: 349 TTSKPGHELLLFEALREGLEEE 370
>gb|AEW31333.1| putative plastidial pyruvate dehydrogenase E1 beta protein [Elaeis
guineensis]
Length = 394
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Frame = +1
Query: 271 QHSV--NVKKQVSKLVTHATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
+HSV N + L+T+A AAK E +A ST SK GHE+LLFEALREGL+EE
Sbjct: 36 RHSVSFNAGLRAGHLITNAVAAKSEASAKSTDSKPGHEVLLFEALREGLEEE 87
>ref|XP_004236890.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like
[Solanum lycopersicum]
Length = 411
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/42 (64%), Positives = 35/42 (83%)
Frame = +1
Query: 295 QVSKLVTHATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
+ +L+T+A A K++ A+STSSK GHELLLFEALREGL+EE
Sbjct: 63 RAEQLITNAVATKEDTAAASTSSKPGHELLLFEALREGLEEE 104
>ref|XP_004244808.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like
[Solanum lycopersicum]
Length = 408
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/42 (64%), Positives = 35/42 (83%)
Frame = +1
Query: 295 QVSKLVTHATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
+ +L+T+A AAK++ A+STS K GHELLLFEALREGL+EE
Sbjct: 60 RAEQLITNAVAAKEDAAAASTSFKPGHELLLFEALREGLEEE 101
>ref|XP_002324031.1| PYRUVATE DEHYDROGENASE E1 BETA family protein [Populus trichocarpa]
gi|222867033|gb|EEF04164.1| PYRUVATE DEHYDROGENASE E1
BETA family protein [Populus trichocarpa]
Length = 411
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/58 (51%), Positives = 43/58 (74%)
Frame = +1
Query: 247 NGSVNPRWQHSVNVKKQVSKLVTHATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
+G+VN S ++V +L+T+A A K + +A+S++SK GHELLLFEALREGL+EE
Sbjct: 47 DGTVNLNLGGSNARARRVDQLITNAVATKADSSAASSTSKPGHELLLFEALREGLEEE 104
>gb|ACF17670.1| putative pyruvate dehydrogenase E1 beta subunit [Capsicum annuum]
Length = 408
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +1
Query: 310 VTHATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
+T+A AAK++ A+STSSK GHELLLFEALREGL+EE
Sbjct: 65 ITNAVAAKEDTAAASTSSKPGHELLLFEALREGLEEE 101
>ref|XP_004149671.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like
isoform 2 [Cucumis sativus]
Length = 410
Score = 57.4 bits (137), Expect = 2e-06
Identities = 32/73 (43%), Positives = 44/73 (60%)
Frame = +1
Query: 202 FFHRFSQLDSKRLTVNGSVNPRWQHSVNVKKQVSKLVTHATAAKDEVTASSTSSKSGHEL 381
FF R + R V G+ H+ + + L+T+A A K + ++ ST+SK GHEL
Sbjct: 36 FFERKGRFFIVRSDVTGA-----NHAFTPRSRSHHLITNAVATKADTSSPSTTSKPGHEL 90
Query: 382 LLFEALREGLDEE 420
LLFEALREGL+EE
Sbjct: 91 LLFEALREGLEEE 103
>ref|XP_003633031.1| PREDICTED: LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 component
subunit beta-like [Vitis vinifera]
Length = 402
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +1
Query: 307 LVTHATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
L+T+A AAK + +A+ST+SK GHELLLFEALREGL+EE
Sbjct: 58 LITNAVAAKADASATSTASKPGHELLLFEALREGLEEE 95
>emb|CAN79920.1| hypothetical protein VITISV_002109 [Vitis vinifera]
Length = 360
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +1
Query: 307 LVTHATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
L+T+A AAK + +A+ST+SK GHELLLFEALREGL+EE
Sbjct: 58 LITNAVAAKADASATSTASKPGHELLLFEALREGLEEE 95
>gb|EXC29338.1| Pyruvate dehydrogenase E1 component subunit beta [Morus notabilis]
Length = 402
Score = 56.6 bits (135), Expect = 3e-06
Identities = 37/91 (40%), Positives = 50/91 (54%)
Frame = +1
Query: 148 ATGLSSFAIPSSHKSQPGFFHRFSQLDSKRLTVNGSVNPRWQHSVNVKKQVSKLVTHATA 327
AT LSS + S+ P S+ + V + P + ++ LV +A A
Sbjct: 11 ATALSSNSFDSTKLLVPSR-RSLSERKASFFCVRSEMKP-----TPIARRADNLVVNAVA 64
Query: 328 AKDEVTASSTSSKSGHELLLFEALREGLDEE 420
K + +ASST+SK GHELLLFEALREGL+EE
Sbjct: 65 TKADSSASSTASKPGHELLLFEALREGLEEE 95
>emb|CBI28658.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/39 (66%), Positives = 34/39 (87%)
Frame = +1
Query: 304 KLVTHATAAKDEVTASSTSSKSGHELLLFEALREGLDEE 420
+L+T+A AAK + + +ST+SK GHELLLFEALREGL+EE
Sbjct: 60 RLITNAVAAKADASVTSTASKPGHELLLFEALREGLEEE 98