BLASTX nr result
ID: Ephedra25_contig00012960
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00012960
(833 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250919.1| PREDICTED: zinc finger CCCH domain-containin... 80 1e-12
ref|XP_004250918.1| PREDICTED: zinc finger CCCH domain-containin... 80 1e-12
emb|CBI28616.3| unnamed protein product [Vitis vinifera] 80 1e-12
emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera] 80 1e-12
gb|EXB52101.1| hypothetical protein L484_024651 [Morus notabilis] 79 2e-12
gb|EOY32749.1| Zinc finger family protein / RNA recognition moti... 79 2e-12
gb|EXB93337.1| Zinc finger CCCH domain-containing protein 46 [Mo... 79 2e-12
gb|EOY17560.1| Zinc finger family protein / RNA recognition moti... 78 4e-12
gb|EOY17559.1| Zinc finger family protein / RNA recognition moti... 78 4e-12
gb|EOY17558.1| Zinc finger family protein / RNA recognition moti... 78 4e-12
gb|EOY17557.1| Zinc finger family protein / RNA recognition moti... 78 4e-12
gb|EOY17556.1| Zinc finger family protein / RNA recognition moti... 78 4e-12
gb|EOY17555.1| Zinc finger family protein / RNA recognition moti... 78 4e-12
gb|EOY17554.1| Zinc finger family protein / RNA recognition moti... 78 4e-12
ref|XP_006365193.1| PREDICTED: zinc finger CCCH domain-containin... 77 6e-12
ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containin... 77 6e-12
ref|XP_006365191.1| PREDICTED: zinc finger CCCH domain-containin... 77 6e-12
ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, part... 77 8e-12
ref|XP_006587690.1| PREDICTED: zinc finger CCCH domain-containin... 77 1e-11
ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containin... 77 1e-11
>ref|XP_004250919.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
isoform 2 [Solanum lycopersicum]
Length = 691
Score = 79.7 bits (195), Expect = 1e-12
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA ++V S+IQ L+ ENASKI GY+L+QD ++EM+RLAFG L+ +LI+ AK
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTC 60
Query: 516 LGIAPTTSSGVDMLN 560
LGI+ SS + LN
Sbjct: 61 LGISSNNSSAMSKLN 75
>ref|XP_004250918.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
isoform 1 [Solanum lycopersicum]
Length = 697
Score = 79.7 bits (195), Expect = 1e-12
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA ++V S+IQ L+ ENASKI GY+L+QD ++EM+RLAFG L+ +LI+ AK
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTC 60
Query: 516 LGIAPTTSSGVDMLN 560
LGI+ SS + LN
Sbjct: 61 LGISSNNSSAMSKLN 75
>emb|CBI28616.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 79.7 bits (195), Expect = 1e-12
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 7/87 (8%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA R+V+S+IQ L+ ENASKI G LL+QD ++EM+RLAFG ALV ++I A++
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 516 LGIAPTT-------SSGVDMLNNNSIS 575
LGI+ T SS L+NN +S
Sbjct: 61 LGISSNTPSTPSTPSSPSPFLSNNPLS 87
>emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera]
Length = 682
Score = 79.7 bits (195), Expect = 1e-12
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 7/87 (8%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA R+V+S+IQ L+ ENASKI G LL+QD ++EM+RLAFG ALV ++I A++
Sbjct: 1 MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60
Query: 516 LGIAPTT-------SSGVDMLNNNSIS 575
LGI+ T SS L+NN +S
Sbjct: 61 LGISSNTPSTPSTPSSPSPFLSNNPLS 87
>gb|EXB52101.1| hypothetical protein L484_024651 [Morus notabilis]
Length = 103
Score = 79.3 bits (194), Expect = 2e-12
Identities = 39/69 (56%), Positives = 52/69 (75%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA R ++S+IQ LE ENA+KI GYLL+QD+ ++EM+RLAFG +L+ LI AK +
Sbjct: 1 MDSYEASRTIFSRIQSLEPENATKIMGYLLIQDNGEKEMIRLAFGLESLLHNLIIKAKTH 60
Query: 516 LGIAPTTSS 542
L I P +SS
Sbjct: 61 LAILPKSSS 69
>gb|EOY32749.1| Zinc finger family protein / RNA recognition motif-containing
protein, putative [Theobroma cacao]
Length = 699
Score = 79.3 bits (194), Expect = 2e-12
Identities = 38/64 (59%), Positives = 50/64 (78%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA R+V+S+IQ L+ ENASKI GYLL+QD ++EM+RLAFG AL+ +LI AK +
Sbjct: 1 MDSYEATRIVFSRIQNLDPENASKIMGYLLIQDHGEKEMIRLAFGPEALIHSLILKAKTH 60
Query: 516 LGIA 527
LG +
Sbjct: 61 LGFS 64
>gb|EXB93337.1| Zinc finger CCCH domain-containing protein 46 [Morus notabilis]
Length = 563
Score = 79.0 bits (193), Expect = 2e-12
Identities = 40/69 (57%), Positives = 51/69 (73%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA R V+S+IQ LE ENA+KI GYLL+QD ++EM+RLAFG +L+ LI AK +
Sbjct: 1 MDSYEASRTVFSRIQSLEPENATKIMGYLLIQDYGEKEMIRLAFGPESLLHNLIIKAKTH 60
Query: 516 LGIAPTTSS 542
L I P +SS
Sbjct: 61 LAILPKSSS 69
>gb|EOY17560.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 7 [Theobroma cacao]
Length = 547
Score = 77.8 bits (190), Expect = 4e-12
Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA R+V+S+IQ LE ENASKI G LL+QD ++EM+RLAFG ALV +++ AK+
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 516 LGI---APTTSS 542
LG+ +PTT S
Sbjct: 61 LGLPTNSPTTPS 72
>gb|EOY17559.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 6 [Theobroma cacao]
Length = 641
Score = 77.8 bits (190), Expect = 4e-12
Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA R+V+S+IQ LE ENASKI G LL+QD ++EM+RLAFG ALV +++ AK+
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 516 LGI---APTTSS 542
LG+ +PTT S
Sbjct: 61 LGLPTNSPTTPS 72
>gb|EOY17558.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 5 [Theobroma cacao]
Length = 601
Score = 77.8 bits (190), Expect = 4e-12
Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA R+V+S+IQ LE ENASKI G LL+QD ++EM+RLAFG ALV +++ AK+
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 516 LGI---APTTSS 542
LG+ +PTT S
Sbjct: 61 LGLPTNSPTTPS 72
>gb|EOY17557.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 4 [Theobroma cacao]
Length = 691
Score = 77.8 bits (190), Expect = 4e-12
Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA R+V+S+IQ LE ENASKI G LL+QD ++EM+RLAFG ALV +++ AK+
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 516 LGI---APTTSS 542
LG+ +PTT S
Sbjct: 61 LGLPTNSPTTPS 72
>gb|EOY17556.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 3 [Theobroma cacao]
Length = 636
Score = 77.8 bits (190), Expect = 4e-12
Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA R+V+S+IQ LE ENASKI G LL+QD ++EM+RLAFG ALV +++ AK+
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 516 LGI---APTTSS 542
LG+ +PTT S
Sbjct: 61 LGLPTNSPTTPS 72
>gb|EOY17555.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 2 [Theobroma cacao]
Length = 693
Score = 77.8 bits (190), Expect = 4e-12
Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA R+V+S+IQ LE ENASKI G LL+QD ++EM+RLAFG ALV +++ AK+
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 516 LGI---APTTSS 542
LG+ +PTT S
Sbjct: 61 LGLPTNSPTTPS 72
>gb|EOY17554.1| Zinc finger family protein / RNA recognition motif-containing
protein isoform 1 [Theobroma cacao]
Length = 724
Score = 77.8 bits (190), Expect = 4e-12
Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA R+V+S+IQ LE ENASKI G LL+QD ++EM+RLAFG ALV +++ AK+
Sbjct: 1 MDGYEATRIVFSRIQNLEPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVVLKAKKE 60
Query: 516 LGI---APTTSS 542
LG+ +PTT S
Sbjct: 61 LGLPTNSPTTPS 72
>ref|XP_006365193.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X3 [Solanum tuberosum]
Length = 692
Score = 77.4 bits (189), Expect = 6e-12
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA ++V S+IQ L+ ENASKI GY+L+QD ++EM+RLAFG L+ +LI+ AK
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTC 60
Query: 516 LGIAPTTSSGVDMLNNNSISH 578
LG++ +SS + + ++ H
Sbjct: 61 LGLSSNSSSAMSNASKLNLFH 81
>ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X2 [Solanum tuberosum]
Length = 695
Score = 77.4 bits (189), Expect = 6e-12
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA ++V S+IQ L+ ENASKI GY+L+QD ++EM+RLAFG L+ +LI+ AK
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTC 60
Query: 516 LGIAPTTSSGVDMLNNNSISH 578
LG++ +SS + + ++ H
Sbjct: 61 LGLSSNSSSAMSNASKLNLFH 81
>ref|XP_006365191.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X1 [Solanum tuberosum]
Length = 701
Score = 77.4 bits (189), Expect = 6e-12
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA ++V S+IQ L+ ENASKI GY+L+QD ++EM+RLAFG L+ +LI+ AK
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTC 60
Query: 516 LGIAPTTSSGVDMLNNNSISH 578
LG++ +SS + + ++ H
Sbjct: 61 LGLSSNSSSAMSNASKLNLFH 81
>ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, partial [Populus
trichocarpa] gi|550331093|gb|EEE87307.2| hypothetical
protein POPTR_0009s05520g, partial [Populus trichocarpa]
Length = 728
Score = 77.0 bits (188), Expect = 8e-12
Identities = 40/69 (57%), Positives = 47/69 (68%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA +V+S+IQ LE ENASKI GYLLLQD ++EM+RLAFG L+Q LI K
Sbjct: 44 MDSYEATNIVFSRIQSLEPENASKIMGYLLLQDYGEKEMIRLAFGPETLLQNLILQTKTQ 103
Query: 516 LGIAPTTSS 542
LG T S
Sbjct: 104 LGFPSNTPS 112
>ref|XP_006587690.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X2 [Glycine max]
Length = 698
Score = 76.6 bits (187), Expect = 1e-11
Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 8/96 (8%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA RVV+S+IQ L+ ENASKI G LLLQD ++E++RLAFG ALV ++I A++
Sbjct: 1 MDSYEATRVVFSRIQNLDPENASKIMGLLLLQDHGEKELIRLAFGPEALVHSVILKARKE 60
Query: 516 LGI---APTTSSGVD-----MLNNNSISHKLYSIVI 599
LG+ +P T+S + + NS S +L ++ I
Sbjct: 61 LGLPSNSPHTTSTLPSPSPYLSKQNSTSSRLSALTI 96
>ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X1 [Glycine max]
Length = 696
Score = 76.6 bits (187), Expect = 1e-11
Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 8/96 (8%)
Frame = +3
Query: 336 MDIYEAIRVVYSKIQRLELENASKIPGYLLLQDSADQEMVRLAFGSNALVQTLISAAKEY 515
MD YEA RVV+S+IQ L+ ENASKI G LLLQD ++E++RLAFG ALV ++I A++
Sbjct: 1 MDSYEATRVVFSRIQNLDPENASKIMGLLLLQDHGEKELIRLAFGPEALVHSVILKARKE 60
Query: 516 LGI---APTTSSGVD-----MLNNNSISHKLYSIVI 599
LG+ +P T+S + + NS S +L ++ I
Sbjct: 61 LGLPSNSPHTTSTLPSPSPYLSKQNSTSSRLSALTI 96