BLASTX nr result
ID: Ephedra25_contig00012930
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00012930
(1035 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003648684.1| hypothetical protein THITE_2106430 [Thielavi... 125 3e-26
ref|XP_004985197.1| PREDICTED: replication protein A 70 kDa DNA-... 123 1e-25
ref|XP_004301112.1| PREDICTED: replication protein A 70 kDa DNA-... 123 1e-25
ref|XP_006440765.1| hypothetical protein CICLE_v10019317mg [Citr... 122 2e-25
ref|XP_006477677.1| PREDICTED: replication protein A 70 kDa DNA-... 122 2e-25
ref|XP_004236053.1| PREDICTED: replication protein A 70 kDa DNA-... 122 2e-25
ref|XP_003349525.1| RFA1 protein [Sordaria macrospora k-hell] gi... 122 3e-25
gb|EME81073.1| hypothetical protein MYCFIDRAFT_29007 [Pseudocerc... 121 5e-25
gb|EFX03800.1| replication protein a DNA-binding subunit [Grosma... 121 5e-25
ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [S... 120 9e-25
ref|XP_006345121.1| PREDICTED: replication protein A 70 kDa DNA-... 120 1e-24
ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Popu... 120 1e-24
ref|XP_006649629.1| PREDICTED: replication protein A 70 kDa DNA-... 119 2e-24
ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici... 119 2e-24
gb|ESW30149.1| hypothetical protein PHAVU_002G128800g [Phaseolus... 118 3e-24
gb|ACG44315.1| replication protein A 70 kDa DNA-binding subunit ... 118 3e-24
gb|EMT13867.1| Replication protein A 70 kDa DNA-binding subunit ... 118 4e-24
gb|AAB71836.1| replication protein A1 [Oryza sativa Indica Group... 118 4e-24
dbj|BAC77529.1| replication protein A 70b [Oryza sativa Japonica... 118 4e-24
ref|XP_002519884.1| replication factor A 1, rfa1, putative [Rici... 118 4e-24
>ref|XP_003648684.1| hypothetical protein THITE_2106430 [Thielavia terrestris NRRL 8126]
gi|346995945|gb|AEO62348.1| hypothetical protein
THITE_2106430 [Thielavia terrestris NRRL 8126]
Length = 610
Score = 125 bits (314), Expect = 3e-26
Identities = 79/245 (32%), Positives = 125/245 (51%)
Frame = +2
Query: 164 PLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRNIVFWNEDA 343
P+ LSP + NKW KVRV +K ++R +H G G + ++L+D+ R F NE
Sbjct: 179 PIEALSPYS--NKWTIKVRVTSKSDIRTWHKASGDGKLFSVNLLDETGEIRATGF-NEQV 235
Query: 344 IHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQKIEDDPSIPHFKFD 523
F ++ G ++S + KK N +E R T ++K ED S+P +F+
Sbjct: 236 DQFYDLLQEGSVYYISTPCKVQLAKKQFSNLANDYEMMFERDTVIEKAEDQSSVPQLRFN 295
Query: 524 FTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRSKFSVNAFL 703
F I+EL +V D DV G++ +V ++ I ++ TQ+ +R++ LVD + FSV +
Sbjct: 296 FCNIEELRDV-EKDATVDVIGVLKEVGEVTEIISKTTQKPYDKRELTLVDDTGFSVRVTI 354
Query: 704 WGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETAS 883
WG AT F NP + ++AL+ R +DF S+ + + IDP IPE
Sbjct: 355 WGKTAT--------EFDANPES--IIALKGTRVSDFGGRSLSLLSSGTMAIDPDIPEAHK 404
Query: 884 LKQWF 898
LK W+
Sbjct: 405 LKGWY 409
>ref|XP_004985197.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Setaria italica]
Length = 623
Score = 123 bits (308), Expect = 1e-25
Identities = 74/253 (29%), Positives = 132/253 (52%)
Frame = +2
Query: 140 VSQYKNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRN 319
+S + + PLI+L+P N WV KVRV +KG LR + N RG+G + +++L D+D T
Sbjct: 173 LSMTRRVHPLISLNPYQGN--WVIKVRVTSKGNLRTYKNARGEGCVFNVELTDEDGTQIQ 230
Query: 320 IVFWNEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQKIEDDP 499
+NE A F + G +VS + K+ K N +E +++ E +
Sbjct: 231 ATMFNEAAKKFYPMFELGKVYYVSKGSLRIANKQFK-TVQNDYEMTLNESAVVEEAEGET 289
Query: 500 SIPHFKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRS 679
IP +++F ID+L + D+ G+V VS I+ + + +R I + D S
Sbjct: 290 FIPPVQYNFVKIDQLGSYVNGRELVDIVGVVQSVSPTMSIRRKLDNETIPKRDIVVADDS 349
Query: 680 KFSVNAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFID 859
+V+ LW LAT+ L + ++P ++A+R++R +DF +S+ ++ K+ + ++
Sbjct: 350 GKTVSISLWNDLATTTGQELLDMVDSSP----IIAIRSLRVSDFQGVSLSTVGKSTLMVN 405
Query: 860 PSIPETASLKQWF 898
P +PE +LK W+
Sbjct: 406 PDLPEVHNLKSWY 418
>ref|XP_004301112.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Fragaria vesca subsp. vesca]
Length = 606
Score = 123 bits (308), Expect = 1e-25
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 1/269 (0%)
Frame = +2
Query: 152 KNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRNIVFW 331
+ + P+++L+P N W KVRV KG +R + N RGQG + +++L D+D T +
Sbjct: 161 RRVHPIVSLNPYQGN--WTIKVRVTNKGPMRTYTNARGQGCVFNVELTDEDGTEIQATMF 218
Query: 332 NEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQKI-EDDPSIP 508
NE A F G +VS + KK N +E +++ ++ ++ +P
Sbjct: 219 NEAAKKFFEKFELGKVYYVSKGSLKLANKKFS-TLKNDYEMTLNENSEVDEVCNEEAFVP 277
Query: 509 HFKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRSKFS 688
KFDF PID L DV G+V VS I+ ++ + +R I + D SK
Sbjct: 278 ETKFDFVPIDMLGPHVNQKVLVDVIGVVTSVSPTMSIRRKSNNESIPKRDITIADESKKV 337
Query: 689 VNAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSI 868
V LW LAT L ++ +P ++A+++VR D+ +S+ ++ K+ + +DP +
Sbjct: 338 VVVSLWNDLATGVGQELLDKVNQSP----VVAIKSVRVGDYQGVSLSTVSKSSIVVDPDL 393
Query: 869 PETASLKQWFSQLCHSRPSMGFVGATRFP 955
PE LK W+ SM VG+ P
Sbjct: 394 PEAKRLKSWYDSE-GKEVSMASVGSGMSP 421
>ref|XP_006440765.1| hypothetical protein CICLE_v10019317mg [Citrus clementina]
gi|557543027|gb|ESR54005.1| hypothetical protein
CICLE_v10019317mg [Citrus clementina]
Length = 623
Score = 122 bits (307), Expect = 2e-25
Identities = 70/250 (28%), Positives = 129/250 (51%), Gaps = 1/250 (0%)
Frame = +2
Query: 152 KNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRNIVFW 331
+ + PL++L+P N W KVRV +KG +R + N RG+G + +++L D+D T +
Sbjct: 172 RRVHPLVSLNPYQGN--WTIKVRVTSKGNMRTYKNVRGEGCVFNVELTDEDGTQIQATMF 229
Query: 332 NEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQK-IEDDPSIP 508
NE A F G ++S + K+ K N +E +++++ + + IP
Sbjct: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFK-TVQNDYEMNLNENSEVEEAVNETAFIP 288
Query: 509 HFKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRSKFS 688
KF+F PIDEL D+ G+V VS I+ ++ ++ +R I + D +K +
Sbjct: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
Query: 689 VNAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSI 868
V LW LAT+ L + +P ++A+++++ DF +S+ ++ ++ V ++P +
Sbjct: 349 VTVSLWNELATNVGQELLDNADKSP----IVAIKSLKVGDFQGISLSTLGRSTVLVNPDL 404
Query: 869 PETASLKQWF 898
PE LK W+
Sbjct: 405 PEAKKLKSWY 414
>ref|XP_006477677.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Citrus sinensis]
Length = 623
Score = 122 bits (306), Expect = 2e-25
Identities = 70/250 (28%), Positives = 128/250 (51%), Gaps = 1/250 (0%)
Frame = +2
Query: 152 KNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRNIVFW 331
+ + PL++L+P N W KVRV +KG +R + N RG+G + +++L D+D T +
Sbjct: 172 RRVHPLVSLNPYQGN--WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
Query: 332 NEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQK-IEDDPSIP 508
NE A F G ++S + K+ K N +E +++++ + + IP
Sbjct: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFK-TVQNDYEMNLNENSEVEEAVNETAFIP 288
Query: 509 HFKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRSKFS 688
KF+F PIDEL D+ G+V VS I+ ++ ++ +R I + D +K +
Sbjct: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
Query: 689 VNAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSI 868
V LW LAT+ L + +P ++A+++++ DF +S+ ++ ++ V + P +
Sbjct: 349 VTVSLWNELATNVGQELLDNADKSP----IVAIKSLKVGDFQGISLSTLGRSTVLVSPDL 404
Query: 869 PETASLKQWF 898
PE LK W+
Sbjct: 405 PEAKKLKSWY 414
>ref|XP_004236053.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Solanum lycopersicum]
Length = 614
Score = 122 bits (306), Expect = 2e-25
Identities = 72/250 (28%), Positives = 128/250 (51%), Gaps = 1/250 (0%)
Frame = +2
Query: 152 KNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRNIVFW 331
+ + PL++L+P N W KVRV +KG +R + N RG+G + +++L D+D T +
Sbjct: 166 RRIQPLVSLNPYQGN--WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 223
Query: 332 NEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQKIEDDPS-IP 508
NE A F G ++S + K+ K N +E +Q+++ ++ + IP
Sbjct: 224 NEAAKKFFDKFELGKVYYISKGTLRVANKQFK-TVQNDYEMTLNENSQVEEASNEEAFIP 282
Query: 509 HFKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRSKFS 688
KF+F PIDEL DV G+V VS I+ ++ + +R I + D +K +
Sbjct: 283 EIKFNFVPIDELGPYVNGRELVDVIGVVQSVSPTMSIRRKSNNETVPKRDITIADETKKT 342
Query: 689 VNAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSI 868
V LW LAT L + +P ++A+++++ DF LS+ ++ K+ + ++P +
Sbjct: 343 VVVSLWNDLATHVGQELLDMADKSP----VVAIKSLKVGDFQGLSLSALSKSNIVVNPDL 398
Query: 869 PETASLKQWF 898
PE L+ W+
Sbjct: 399 PEAKKLRSWY 408
>ref|XP_003349525.1| RFA1 protein [Sordaria macrospora k-hell]
gi|380093400|emb|CCC09058.1| putative RFA1 protein
[Sordaria macrospora k-hell]
Length = 610
Score = 122 bits (305), Expect = 3e-25
Identities = 85/303 (28%), Positives = 145/303 (47%), Gaps = 8/303 (2%)
Frame = +2
Query: 125 RGDIGVSQYKNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQD 304
R G + P+ LSP ++KW K RV +K +++ +H G+G + ++ +D+
Sbjct: 163 RNTSGGQGSNTIYPIEGLSP--FSHKWTIKARVTSKSDIKTWHKPSGEGKLFSVNFLDES 220
Query: 305 ETTRNIVFWNEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQK 484
R F NE F ++ G ++S + KK N +E R TQ++K
Sbjct: 221 GEIRATGF-NEQVDQFYDLLQEGQVYYISTPCRVQLAKKQFSNLPNDYELTFERDTQIEK 279
Query: 485 IEDDPSIPHFKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIR 664
ED S+P +F+F I EL +V D DV G++ +V ++ I ++ TQ+ +R++
Sbjct: 280 AEDQTSVPQVRFNFVNIQELQDV-EKDATIDVIGVLKEVQEVTQIVSKTTQKPYDKRELT 338
Query: 665 LVDRSKFSVNAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKT 844
LVD + +SV +WG AT+ F P + ++A++ + +DF S+ +
Sbjct: 339 LVDNTGYSVRCTIWGKTATN--------FDAQPES--IVAMKGTKVSDFGGRSLSLLSSG 388
Query: 845 RVFIDPSIPETASLKQWFSQ--------LCHSRPSMGFVGATRFPPKTITLSEIHEERRT 1000
+ IDP IPE LK W+ ++ ++G GAT T T+S++ EE
Sbjct: 389 TMAIDPDIPEAHHLKGWYDSSGRNNTFATHNNMATLG--GATGRKDDTKTISQVKEENLG 446
Query: 1001 TEE 1009
T E
Sbjct: 447 TGE 449
>gb|EME81073.1| hypothetical protein MYCFIDRAFT_29007 [Pseudocercospora fijiensis
CIRAD86]
Length = 621
Score = 121 bits (303), Expect = 5e-25
Identities = 91/348 (26%), Positives = 160/348 (45%), Gaps = 10/348 (2%)
Frame = +2
Query: 2 KPATDEDRVAQRAKTAA--ILERRGYKRVVEGTDEGTSAGKRPRGDIGVSQYKNLTPLIN 175
KP ED Q A ++ + ++ + S R G + N+TP+
Sbjct: 122 KPEAQEDVKPQPGNIAGNNFYGQKPQQAQLQQQQQQRSLPSRTNGASHGGAHGNITPIEA 181
Query: 176 LSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRNIVFWNEDAIHFD 355
+SP +KW K R +KG+++ +HN G+G + + +D+ R +F NE +
Sbjct: 182 VSPY--QHKWTIKARCTSKGDIKTWHNKNGEGKLFSANFLDETSEIRATMF-NEQCDQWY 238
Query: 356 RIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQKIEDDPSIPHFKFDFTPI 535
++ G ++S + KK N +E R TQ++K DD +P K+ FT +
Sbjct: 239 DVLQEGSVYYISSPCKVQLAKKQFSNLPNDYELTFERDTQVEK-ADDEGVPQVKYSFTNL 297
Query: 536 DELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRSKFSVNAFLWGSL 715
+ L NV D DV G++ V +++ I ++ T + +R++ LVD + ++V +WG +
Sbjct: 298 ESLQNV-EKDTVTDVIGVLADVGEVNEIVSKTTSKPYSKRELTLVDDTGYNVRLTIWGKV 356
Query: 716 ATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPETASLKQW 895
A E F +P A ++A + V+ +DF S+ + + IDP I E LK W
Sbjct: 357 A--------ESFDASPEA--VVAFKGVKVSDFGGRSLSLLSSGSMNIDPDIDEAYKLKGW 406
Query: 896 F------SQLCHSRPSMGFVGATRFPPK--TITLSEIHEERRTTEEAS 1015
+ +Q +M VGAT K T T+ ++ +E +A+
Sbjct: 407 YQANGSTTQFASHANTMATVGATSGGRKDDTKTIQQVRDENLGMTDAT 454
>gb|EFX03800.1| replication protein a DNA-binding subunit [Grosmannia clavigera
kw1407]
Length = 631
Score = 121 bits (303), Expect = 5e-25
Identities = 87/318 (27%), Positives = 152/318 (47%), Gaps = 10/318 (3%)
Frame = +2
Query: 95 DEGTSAGKRPRGDIGVSQ--YKNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQ 268
+ G S GK G S + N+ P+ LSP + +KW K RV +K E+R +H + G+
Sbjct: 173 NNGNSTGKPSGTSYGGSNAAHPNIYPIEGLSPYS--HKWTIKARVTSKSEIRTWHKSSGE 230
Query: 269 GSILDMDLIDQDETTRNIVFWNEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKF 448
G + ++L+D+ + F NE + ++ G ++S KK N +
Sbjct: 231 GKLFSVNLLDESGEIKATGF-NEQCDQYYDLLQEGSVYYISSPCRVNIAKKQFSNLPNDY 289
Query: 449 EFKGTRFTQMQKIEDDPSIPHFKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNR 628
E R TQ++K ED S+P ++ F + L +V D DV G++ V ++ I ++
Sbjct: 290 ELSFERDTQIEKAEDQSSVPQVRYAFCTLQALQSV-EKDAVIDVIGVLRDVGEVSSITSK 348
Query: 629 NTQQLSFRRQIRLVDRSKFSVNAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTD 808
++ + +R++ LVD S FSV +WG A + F P + ++A + VR +D
Sbjct: 349 SSGKPYEKRELTLVDDSSFSVRTTIWGKTAVA--------FDAKPES--VIAFKGVRVSD 398
Query: 809 FAHLSIQSIDKTRVFIDPSIPETASLKQWF-----SQLCHSRPSMGFVG---ATRFPPKT 964
F S+ + + IDP I E LK W+ S+ S SMG +G + P +
Sbjct: 399 FGGRSLSLLQSGVMSIDPDITEAHHLKGWYDAAGRSENFSSHNSMGGMGGGAGSGRPEQV 458
Query: 965 ITLSEIHEERRTTEEASF 1018
T++++ +E +E ++
Sbjct: 459 KTIAQVRDENIGMDETAY 476
>ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [Sorghum bicolor]
gi|241922132|gb|EER95276.1| hypothetical protein
SORBIDRAFT_01g042890 [Sorghum bicolor]
Length = 623
Score = 120 bits (301), Expect = 9e-25
Identities = 73/253 (28%), Positives = 130/253 (51%)
Frame = +2
Query: 140 VSQYKNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRN 319
+S + + PLI L+P N WV KVRV +KG LR + N RG+G + +++L D+D T
Sbjct: 173 LSMTRRVHPLITLNPYQGN--WVIKVRVTSKGNLRTYRNARGEGCVFNVELTDEDGTQIQ 230
Query: 320 IVFWNEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQKIEDDP 499
+NE A F I G +VS + K+ K N +E +++ E +
Sbjct: 231 ATMFNEAAKKFYPIFELGKVYYVSKGSLRIANKQFK-TVQNDYEMSLNENAIVEEAEGET 289
Query: 500 SIPHFKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRS 679
IP +++F ID L G D+ G+V VS ++ + + +R I + D S
Sbjct: 290 FIPQVQYNFVKIDHLGTYVGGRELVDIIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDS 349
Query: 680 KFSVNAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFID 859
+V+ LW LAT+ L + ++P ++A+++++ +DF +S+ +I ++ + I+
Sbjct: 350 GKTVSISLWNDLATTTGQELLDMVDSSP----VVAIKSLKVSDFQGVSLSTIGRSTLAIN 405
Query: 860 PSIPETASLKQWF 898
P +PE ++K W+
Sbjct: 406 PDLPEAQNVKSWY 418
>ref|XP_006345121.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Solanum tuberosum]
Length = 614
Score = 120 bits (300), Expect = 1e-24
Identities = 71/250 (28%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Frame = +2
Query: 152 KNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRNIVFW 331
+ + PL++L+P N W KVRV +KG +R + N RG+G + +++L D+D T +
Sbjct: 166 RRIQPLVSLNPYQGN--WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 223
Query: 332 NEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQK-IEDDPSIP 508
NE A F G ++S + K+ K N +E +Q+++ ++ IP
Sbjct: 224 NEAAKKFFDKFELGKVYYISKGTLRVANKQFK-TVQNDYEMTLNETSQVEEACNEEAFIP 282
Query: 509 HFKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRSKFS 688
KF+F PIDEL DV G+V VS I+ ++ + +R I + D +K +
Sbjct: 283 ETKFNFVPIDELGPYVNGRELVDVIGVVQSVSPTMSIRRKSNNETVPKRDITIADETKKT 342
Query: 689 VNAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSI 868
V LW LAT L + +P ++A+++++ DF +S+ ++ K+ + ++P +
Sbjct: 343 VVVSLWNDLATHVGQELLDMADKSP----VVAIKSLKVGDFQGVSLSALSKSNIVVNPDL 398
Query: 869 PETASLKQWF 898
PE L+ W+
Sbjct: 399 PEAKKLRSWY 408
>ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Populus trichocarpa]
gi|550342884|gb|EEE79356.2| hypothetical protein
POPTR_0003s10170g [Populus trichocarpa]
Length = 854
Score = 120 bits (300), Expect = 1e-24
Identities = 84/287 (29%), Positives = 141/287 (49%), Gaps = 3/287 (1%)
Frame = +2
Query: 158 LTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRNIVFWNE 337
+ P+ L+P +W K RV AKGELR ++NTRG G + DL+D D + +N+
Sbjct: 258 IIPITALNPY--QGRWTIKARVTAKGELRHYNNTRGDGKVFSFDLLDSDGGEIRVTCFNQ 315
Query: 338 DAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQKIEDDPSIPHFK 517
A F I G +S + K H + F + T EDD +IP +
Sbjct: 316 VADQFYHQIEAGRVYLISKGNLKPAQKNFNHLRHDLEIFLESTSTIQPCFEDDNTIPKQQ 375
Query: 518 FDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRSKFSVNA 697
F F PI ++ ++ N DV G+V ++ + +N + +R ++L D S SV
Sbjct: 376 FHFRPISDVEDMENNSV-VDVIGVVTSIAPTTSLMRKNGTETQ-KRTLQLKDMSGRSVEL 433
Query: 698 FLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPET 877
LWG+ +E L + + G P +LA+++ R ++F+ ++ +I +++FI+P PE
Sbjct: 434 TLWGNFCNAEGQRL-QHICDSGGFP-VLAVKSGRISEFSGKAVGTISTSQLFIEPDSPEA 491
Query: 878 ASLKQWFSQLCHSRPSMGFVGATRFPPKT---ITLSEIHEERRTTEE 1009
LK+WF + + PS+ T ++ T+S+I +ER T E
Sbjct: 492 NRLKEWFDRDGRNTPSLSISRETSTLGRSDVMKTISQIKDERLGTSE 538
>ref|XP_006649629.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Oryza brachyantha]
Length = 632
Score = 119 bits (298), Expect = 2e-24
Identities = 72/249 (28%), Positives = 126/249 (50%)
Frame = +2
Query: 152 KNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRNIVFW 331
+ + PLI+L+P N WV KVRV +KG LR + N RG+G + +++L D+D T +
Sbjct: 186 RRVHPLISLNPYQGN--WVIKVRVTSKGNLRTYRNARGEGCVFNVELTDEDGTQIQATMF 243
Query: 332 NEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQKIEDDPSIPH 511
NE A F + G ++S + K+ K N +E +++ E + IP
Sbjct: 244 NEAAKKFYPMFELGKVYYISKGSLRIANKQFK-TVHNDYEMTLNENAVVEEAEGETFIPQ 302
Query: 512 FKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRSKFSV 691
+++F ID+L G DV G+V VS I+ + + +R I + D S +V
Sbjct: 303 IQYNFVKIDQLGPYVGGRELVDVIGVVQSVSPTLSIRRKIDNETIPKRDIVVADDSSKTV 362
Query: 692 NAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSIP 871
LW LAT+ L + + P ++A++ ++ +DF LS+ ++ K+ + ++P +P
Sbjct: 363 TISLWNDLATTTGQELLDMVDSAP----IVAIKCMKVSDFQGLSLSTVGKSTIAVNPDLP 418
Query: 872 ETASLKQWF 898
E L+ W+
Sbjct: 419 EAEKLRAWY 427
>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
gi|223546255|gb|EEF47757.1| replication factor A 1,
rfa1, putative [Ricinus communis]
Length = 622
Score = 119 bits (298), Expect = 2e-24
Identities = 76/269 (28%), Positives = 133/269 (49%), Gaps = 1/269 (0%)
Frame = +2
Query: 152 KNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRNIVFW 331
+ + PL++L+P N W KVRV +KG +R + N RG+G + +++L D+D T +
Sbjct: 174 RRVHPLVSLNPYQGN--WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 231
Query: 332 NEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQKIEDDPS-IP 508
NE A F G ++S + + K N +E +Q+++ D+ + IP
Sbjct: 232 NEAARKFYDKFQLGKVYYISKGSL-KVANKQFRTVQNDYEMNLNENSQVEEASDEAAFIP 290
Query: 509 HFKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRSKFS 688
KF+F PID+L + DV G+V VS I+ ++ + +R I + D +K +
Sbjct: 291 ETKFNFVPIDQLGPYVSTNELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADETKKT 350
Query: 689 VNAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSI 868
V LW LAT L + +P ++A++ ++ DF +S+ ++ ++ + ++P
Sbjct: 351 VVVSLWNDLATDVGQELLDMADKSP----VVAIKALKVGDFQGVSLSTLGRSIIQVNPDT 406
Query: 869 PETASLKQWFSQLCHSRPSMGFVGATRFP 955
PE+ LK WF S+ VGA P
Sbjct: 407 PESKKLKSWFDSE-GKETSLASVGAGLSP 434
>gb|ESW30149.1| hypothetical protein PHAVU_002G128800g [Phaseolus vulgaris]
Length = 866
Score = 118 bits (296), Expect = 3e-24
Identities = 94/300 (31%), Positives = 138/300 (46%), Gaps = 5/300 (1%)
Frame = +2
Query: 125 RGDIGVSQYK-NLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQ 301
RG +G ++ + P+ L+P N W K RV AKGELR ++N RG G + DL+D
Sbjct: 246 RGPMGKNEAAPRIIPIAALNPY--QNMWTIKARVTAKGELRHYNNARGDGKVFSFDLLDS 303
Query: 302 DETTRNIVFWNEDAIHFDRIINTGDTCFVSGAKITETPKKAKH-PTFNKFEFKGTRFTQM 478
D +N A F +I G VS + K H P + T Q
Sbjct: 304 DGGQIRATCFNSVADQFYNLIEAGKVYLVSRGSVKPAQKNFNHLPNDQELTLDMTSIIQP 363
Query: 479 QKIEDDPSIPHFKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQ 658
+DD SIP F+F PI E+ ++ N DV G+V +S I +N + +R
Sbjct: 364 CP-DDDNSIPKQTFNFRPISEIESLESNTI-VDVIGVVTSISPTASIMRKNGTETQ-KRT 420
Query: 659 IRLVDRSKFSVNAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSID 838
++L D S SV LWG+ E L + GA +LA + VR DF S+ +I
Sbjct: 421 LQLKDMSGRSVELTLWGNFCNVEGQKLQN--ICDDGAFPVLAAKAVRINDFNGKSVGTIM 478
Query: 839 KTRVFIDPSIPETASLKQWFSQLCHSRPSMGFVGATRFPPKT---ITLSEIHEERRTTEE 1009
+ +F++P E +LK+WF S P++ T PK T+S+I +E+ T E
Sbjct: 479 TSLLFVEPDFQEAYTLKRWFENEGKSVPTLSISRDTSNFPKNDNRKTVSQIKDEKLGTSE 538
>gb|ACG44315.1| replication protein A 70 kDa DNA-binding subunit [Zea mays]
Length = 618
Score = 118 bits (296), Expect = 3e-24
Identities = 72/253 (28%), Positives = 131/253 (51%)
Frame = +2
Query: 140 VSQYKNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRN 319
+S K + PLI L+P N WV KVRV +KG LR + N RG+G + +++L D+D T
Sbjct: 168 LSMTKRVHPLITLNPYQGN--WVIKVRVTSKGNLRTYRNARGEGCVFNVELTDEDGTQIQ 225
Query: 320 IVFWNEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQKIEDDP 499
+N+ A F I G+ +VS + K+ K N +E +++ E +
Sbjct: 226 ATMFNDAAKKFYPIFELGNVYYVSKGSLRIANKQFK-TVQNDYEMSLNENAIVEEAEGET 284
Query: 500 SIPHFKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRS 679
IP +++ ID+L + G D+ G+V VS ++ + + +R I + D S
Sbjct: 285 CIPQVQYNLVKIDQLGSYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDS 344
Query: 680 KFSVNAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFID 859
+V+ LW LAT+ L + ++P ++A+++++ +DF +S+ ++ K+ + I+
Sbjct: 345 GKTVSISLWNDLATTTGQELLDMADSSP----VVAIKSLKVSDFQGVSLSTVGKSTLAIN 400
Query: 860 PSIPETASLKQWF 898
P + E +LK W+
Sbjct: 401 PDLHEAQNLKSWY 413
>gb|EMT13867.1| Replication protein A 70 kDa DNA-binding subunit [Aegilops
tauschii]
Length = 600
Score = 118 bits (295), Expect = 4e-24
Identities = 72/249 (28%), Positives = 127/249 (51%)
Frame = +2
Query: 152 KNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRNIVFW 331
+ + PLI+L+P N WV KVRV +KG LR + N RG+G + +++L D+D T +
Sbjct: 154 RRVHPLISLNPYQGN--WVIKVRVTSKGNLRSYRNARGEGHVFNVELTDEDGTQIQATMF 211
Query: 332 NEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQKIEDDPSIPH 511
NE A F + G ++S + K+ K N +E +++ E + IP
Sbjct: 212 NEPAKKFYPVFELGKVYYISKGSLRIANKQFK-TVQNDYEMTLNENAVVEEAEGESFIPP 270
Query: 512 FKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRSKFSV 691
+++F ID L G D+ G+V VS I+ + + +R I + D S +V
Sbjct: 271 VQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTV 330
Query: 692 NAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSIP 871
LW LAT+ L + + P ++A+++++ +DF +S+ ++ K+ + I+P +P
Sbjct: 331 TISLWNDLATTVGEELLDMVDSAP----IIAVKSLKVSDFQGVSVSTVGKSTLVINPELP 386
Query: 872 ETASLKQWF 898
ET L+ W+
Sbjct: 387 ETEKLRAWY 395
>gb|AAB71836.1| replication protein A1 [Oryza sativa Indica Group]
gi|125542895|gb|EAY89034.1| hypothetical protein
OsI_10518 [Oryza sativa Indica Group]
Length = 630
Score = 118 bits (295), Expect = 4e-24
Identities = 69/249 (27%), Positives = 126/249 (50%)
Frame = +2
Query: 152 KNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRNIVFW 331
+ + PLI+L+P N W+ KVRV +KG LR + N RG+G + +++L D D T +
Sbjct: 184 RRVHPLISLNPYQGN--WIIKVRVTSKGNLRTYKNARGEGCVFNVELTDVDGTQIQATMF 241
Query: 332 NEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQKIEDDPSIPH 511
NE A F + G ++S + K+ K N +E +++ E + IP
Sbjct: 242 NEAAKKFYPMFELGKVYYISKGSLRVANKQFK-TVHNDYEMTLNENAVVEEAEGETFIPQ 300
Query: 512 FKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRSKFSV 691
+++F ID+L G DV G+V VS ++ + + +R I + D S +V
Sbjct: 301 IQYNFVKIDQLGPYVGGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTV 360
Query: 692 NAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSIP 871
LW LAT+ L + + P ++A+++++ +DF LS+ ++ ++ + ++P +P
Sbjct: 361 TISLWNDLATTTGQELLDMVDSAP----IIAIKSLKVSDFQGLSLSTVGRSTIVVNPDLP 416
Query: 872 ETASLKQWF 898
E L+ W+
Sbjct: 417 EAEQLRAWY 425
>dbj|BAC77529.1| replication protein A 70b [Oryza sativa Japonica Group]
Length = 630
Score = 118 bits (295), Expect = 4e-24
Identities = 69/249 (27%), Positives = 126/249 (50%)
Frame = +2
Query: 152 KNLTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRNIVFW 331
+ + PLI+L+P N W+ KVRV +KG LR + N RG+G + +++L D D T +
Sbjct: 184 RRVHPLISLNPYQGN--WIIKVRVTSKGNLRTYKNARGEGCVFNVELTDVDGTQIQATMF 241
Query: 332 NEDAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQKIEDDPSIPH 511
NE A F + G ++S + K+ K N +E +++ E + IP
Sbjct: 242 NEAAKKFYPMFELGKVYYISKGSLRVADKQFK-TVHNDYEMTLNENAVVEEAEGETFIPQ 300
Query: 512 FKFDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRSKFSV 691
+++F ID+L G DV G+V VS ++ + + +R I + D S +V
Sbjct: 301 IQYNFVKIDQLGPYVGGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTV 360
Query: 692 NAFLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSIP 871
LW LAT+ L + + P ++A+++++ +DF LS+ ++ ++ + ++P +P
Sbjct: 361 TISLWNDLATTTGQELLDMVDSAP----IIAIKSLKVSDFQGLSLSTVGRSTIVLNPDLP 416
Query: 872 ETASLKQWF 898
E L+ W+
Sbjct: 417 EAEQLRAWY 425
>ref|XP_002519884.1| replication factor A 1, rfa1, putative [Ricinus communis]
gi|223540930|gb|EEF42488.1| replication factor A 1, rfa1,
putative [Ricinus communis]
Length = 901
Score = 118 bits (295), Expect = 4e-24
Identities = 85/290 (29%), Positives = 139/290 (47%), Gaps = 6/290 (2%)
Frame = +2
Query: 158 LTPLINLSPKTSNNKWVSKVRVLAKGELRPFHNTRGQGSILDMDLIDQDETTRNIVFWNE 337
+ P+ L+P +W K RV AKGELR ++N RG G + DL+D D ++ +N
Sbjct: 283 IMPISALNPY--QGRWTIKARVTAKGELRHYNNVRGDGKVFSFDLLDSDGGEIRVICFNT 340
Query: 338 DAIHFDRIINTGDTCFVSGAKITETPKKAKHPTFNKFEFKGTRFTQMQKIEDDPSIPHFK 517
A F I G +S + K H + F + EDD +IP +
Sbjct: 341 VADQFYHQIEAGKVYLISRGNLKPAQKTFNHLHNDLEIFLESNSVIQPCFEDDDAIPRQQ 400
Query: 518 FDFTPIDELCNVCGNDFGYDVHGIVLQVSDIHPIKNRNTQQLSFRRQIRLVDRSKFSVNA 697
F F PI E+ + N D+ G+V ++ + I +N + +R ++L D S SV
Sbjct: 401 FHFRPISEVEGMDNNSV-VDIIGMVSCITPVASIMRKNGTETQ-KRTLQLKDNSGRSVEL 458
Query: 698 FLWGSLATSETLPLYERFKTNPGAPFMLALRNVRCTDFAHLSIQSIDKTRVFIDPSIPET 877
LWG+ +E L + + G P +LA+++ R +DF ++ +I +++FI+P IPE
Sbjct: 459 TLWGNFCNAEGQRL-QNMCDSGGFP-VLAVKSGRVSDFNGKAVGTISTSQLFIEPDIPEA 516
Query: 878 ASLKQWFSQLCHSRPSMGF------VGATRFPPKTITLSEIHEERRTTEE 1009
LK+WF + + PS+ VG + T+S+I +E+ T E
Sbjct: 517 RRLKEWFEKEGRNTPSVSISRELSSVGRSEIHK---TISQIKDEKLGTSE 563