BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00012890
         (1469 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849976.1| hypothetical protein AMTR_s00022p00154500 [A...   481   e-133
ref|XP_002967968.1| hypothetical protein SELMODRAFT_440149 [Sela...   435   e-119
ref|XP_002963952.1| hypothetical protein SELMODRAFT_405493 [Sela...   433   e-118
ref|XP_001775034.1| predicted protein [Physcomitrella patens] gi...   431   e-118
ref|XP_001771048.1| predicted protein [Physcomitrella patens] gi...   419   e-114
ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcr...   403   e-109
ref|XP_006483561.1| PREDICTED: RNA polymerase I-specific transcr...   399   e-108
ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcr...   399   e-108
emb|CBI37506.3| unnamed protein product [Vitis vinifera]              397   e-108
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   392   e-106
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   392   e-106
ref|XP_002524432.1| transcription initiation factor ia, putative...   392   e-106
ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   391   e-106
gb|EOX90600.1| Major facilitator superfamily protein isoform 1 [...   387   e-105
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr...   385   e-104
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr...   379   e-102
gb|ESW06108.1| hypothetical protein PHAVU_010G020100g [Phaseolus...   378   e-102
ref|XP_006483467.1| PREDICTED: RNA polymerase I-specific transcr...   372   e-100
ref|XP_002307198.2| RNA polymerase 1 specific transcription init...   371   e-100
ref|XP_006483560.1| PREDICTED: RNA polymerase I-specific transcr...   368   4e-99

>ref|XP_006849976.1| hypothetical protein AMTR_s00022p00154500 [Amborella trichopoda]
            gi|548853574|gb|ERN11557.1| hypothetical protein
            AMTR_s00022p00154500 [Amborella trichopoda]
          Length = 563

 Score =  481 bits (1238), Expect = e-133
 Identities = 251/508 (49%), Positives = 344/508 (67%), Gaps = 19/508 (3%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            Y +L+ ++   E G+ ++E++   TL+ALSQ  SSI+  HH +L+S I  +S WN    V
Sbjct: 48   YMELVRKINDAEPGNSEEEESLAFTLRALSQTTSSISRDHHLALISSIFSISIWNCARVV 107

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMM----LVSKMEQ 1121
            AD L+EFI+NLA +NG FVD CLDMLVRN               T ++M    + ++ E 
Sbjct: 108  ADSLLEFIINLALANGGFVDECLDMLVRNFLPPACGLSHVVDSFTRRLMGQTNIANQHEL 167

Query: 1120 ILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMPHRYLALEWNALYIE 941
            + +   + L RK+EVLD VH A+ +IA +VPTA LRL PII  RMPHR L  +WN L+++
Sbjct: 168  LSKLMHQQLQRKEEVLDLVHSALHKIASLVPTASLRLLPIIFNRMPHRVLLRDWNVLFVD 227

Query: 940  NMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDDDYETE 761
            NMLR+  SAIGE IG+++LMAVVDRLIEIDVEI WEDI  DD SKV +FD+E++   E +
Sbjct: 228  NMLRLHRSAIGEFIGNKLLMAVVDRLIEIDVEIGWEDILQDDPSKV-LFDIELEGFEEND 286

Query: 760  ------------HSRAPHKEKLGDVADKMDVLMEITLEHLKVCAEEGRLQQVYDTLMHSF 617
                        H R   K  L DVA+KMD LME+T EHL++C  E  + +V++TL+ SF
Sbjct: 287  ECHGKPGIEASHHFRDASKHSLADVAEKMDCLMEVTFEHLRLCYTENHVDKVFETLLQSF 346

Query: 616  QTTILNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFV-SSRAPNTRMTAAAYLASF 440
            QTT+L T+KSKFTQFL+FY+CSL PE CGA+FA +L ++FV  +  PNTRM+A AYLAS+
Sbjct: 347  QTTVLGTYKSKFTQFLLFYMCSLDPENCGAKFACLLVDIFVGKNHPPNTRMSAVAYLASY 406

Query: 439  LSRAKYLPLSVVSSSIKRLVDWSLQY--VSNDDRKTMNPKVHRVFYSACQAIMYILCFRM 266
            LSR +++  S+V+S++KRLVDW  +Y  + ++ RK +NP  HRVFYS CQA+MY++CFR+
Sbjct: 407  LSRGRFVSSSLVASTLKRLVDWCSEYCKIQDELRKPLNPATHRVFYSGCQAVMYVVCFRI 466

Query: 265  NLLLDDPKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISITKE 86
              +++ P  +                    VCLPS+V+EF R+++   VF SL  +I + 
Sbjct: 467  GAIMEIPYLK-SHIFRPLESVLHHSLNPLKVCLPSIVEEFLRRTKVADVFTSLATAIVQN 525

Query: 85   MLESESSKSFGGVERLDMFFPFDPYLLK 2
            +LESE+S++FGGVERLDMFFPFDPYLLK
Sbjct: 526  LLESENSRTFGGVERLDMFFPFDPYLLK 553


>ref|XP_002967968.1| hypothetical protein SELMODRAFT_440149 [Selaginella moellendorffii]
            gi|300164706|gb|EFJ31315.1| hypothetical protein
            SELMODRAFT_440149 [Selaginella moellendorffii]
          Length = 637

 Score =  435 bits (1118), Expect = e-119
 Identities = 240/507 (47%), Positives = 318/507 (62%), Gaps = 18/507 (3%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            Y +LL +LK+V+  DP+        ++ALSQ VS INE  H  LLS +  MSFW+ ++E+
Sbjct: 42   YRKLLSDLKNVDFDDPESVSGLAARIRALSQCVSIINERDHEMLLSLVFSMSFWSGSNEL 101

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKM--EQIL 1115
             D +   +VNLA S+G  V RCLDMLVRN               T   +   KM  E + 
Sbjct: 102  LDAIENLVVNLATSSGVLVPRCLDMLVRNFLPPSCGIKVHLDCYTQDRLARKKMTFESLK 161

Query: 1114 QKKTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMPHRYLALEWNALYIENM 935
              K  HL+ K +V++RVHLA+Q+I E+VP A LRL PI+ +RMPHR +  +WN+L++ENM
Sbjct: 162  GLKPLHLSMKSDVVNRVHLALQRILELVPIAALRLHPIVQQRMPHRRVDKDWNSLFLENM 221

Query: 934  LRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHD-DLSKVYIFDMEMDD------ 776
            L +++  +   I SRML+ +VDRLIEIDVEI WEDI  D D SKV +F M++D+      
Sbjct: 222  LLLDSKRVSPAISSRMLLGIVDRLIEIDVEIAWEDILKDEDSSKVLVFHMDVDESDDKQA 281

Query: 775  ----DYETEHSRAPH--KEKLGDVADKMDVLMEITLEHLKVCAEEGRLQQVYDTLMHSFQ 614
                + + EH+ A H  K+ L ++ADKMD LME+  EHL  CA+  RL +VY TLM SF+
Sbjct: 282  APGSEAQLEHALAAHSGKKPLDEIADKMDHLMELVFEHLHQCAKNERLDEVYTTLMVSFK 341

Query: 613  TTILNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFVSSRAP-NTRMTAAAYLASFL 437
            +T+L+T+KSKFTQFLIFYLCSL+P +CG  FA  LC  FV+   P NTRM+AAAYLAS+L
Sbjct: 342  STVLDTYKSKFTQFLIFYLCSLSPSSCGVNFAGFLCETFVTRSIPSNTRMSAAAYLASYL 401

Query: 436  SRAKYLPLSVVSSSIKRLVDWSLQYVSN--DDRKTMNPKVHRVFYSACQAIMYILCFRMN 263
            +RA +LPL VV SS+ RLV+W + +     D  K  +  +H VFY+ACQA+MYILCFR+ 
Sbjct: 402  ARANFLPLPVVLSSVSRLVNWCVSFTPTRFDVFKLTDTALHGVFYAACQAVMYILCFRLR 461

Query: 262  LLLDDPKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISITKEM 83
             L  D  QR                    VCLPSVV+EF RQ+ A+ +            
Sbjct: 462  ELHADSTQRPLLKGLRLQQLIEHKLCPLKVCLPSVVEEFVRQATAIQLISYSGTVEPSSG 521

Query: 82   LESESSKSFGGVERLDMFFPFDPYLLK 2
             E  S KS+GG  RL+MFFPFDPYLL+
Sbjct: 522  FEVLSFKSYGGDNRLEMFFPFDPYLLR 548


>ref|XP_002963952.1| hypothetical protein SELMODRAFT_405493 [Selaginella moellendorffii]
            gi|300167681|gb|EFJ34285.1| hypothetical protein
            SELMODRAFT_405493 [Selaginella moellendorffii]
          Length = 635

 Score =  433 bits (1113), Expect = e-118
 Identities = 239/507 (47%), Positives = 318/507 (62%), Gaps = 18/507 (3%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            Y +LL +LK+V+  D +        ++ALSQ VS INE  H  LLS +  MSFW+ ++E+
Sbjct: 42   YRKLLSDLKNVDFDDSESVSGLAARIRALSQCVSIINERDHEMLLSLVFSMSFWSGSNEL 101

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKM--EQIL 1115
             D +   +VNLA S+G  V RCLDMLVRN               T   +   KM  E + 
Sbjct: 102  LDAIENLVVNLATSSGVLVPRCLDMLVRNFLPPSCGIKVHLDCYTQDRLARKKMTFESLK 161

Query: 1114 QKKTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMPHRYLALEWNALYIENM 935
              K  HL+ K +V++RVHLA+Q+I E+VP A LRL PI+ +RMPHR +  +WN+L++ENM
Sbjct: 162  GLKPLHLSMKNDVMNRVHLALQRILELVPIAALRLHPIVQQRMPHRRVDKDWNSLFLENM 221

Query: 934  LRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHD-DLSKVYIFDMEMDD------ 776
            L +++  +   I SRML+ +VDRLIEIDVEI WEDI  D D SKV +F M++D+      
Sbjct: 222  LLLDSKRVSPAISSRMLLGIVDRLIEIDVEIAWEDILKDEDSSKVLVFHMDVDESDDKQA 281

Query: 775  ----DYETEHSRAPH--KEKLGDVADKMDVLMEITLEHLKVCAEEGRLQQVYDTLMHSFQ 614
                + + EH+ A H  K+ L ++ADKMD LME+  EHL  CA+  RL +VY TLM SF+
Sbjct: 282  APGSEAQLEHALAAHSGKKPLDEIADKMDHLMELVFEHLHQCAKNERLDEVYTTLMVSFK 341

Query: 613  TTILNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFVSSRAP-NTRMTAAAYLASFL 437
            +T+L+T+KSKFTQFLIFYLCSL+P +CGA FA  LC  FV+   P NTRM+AAAYLAS+L
Sbjct: 342  STVLDTYKSKFTQFLIFYLCSLSPSSCGANFAGFLCETFVTRSIPSNTRMSAAAYLASYL 401

Query: 436  SRAKYLPLSVVSSSIKRLVDWSLQYVSN--DDRKTMNPKVHRVFYSACQAIMYILCFRMN 263
            +RA +LPL VV SS+ RLV+W + +     D  K  +  +H VFY+ACQA+MYILCFR+ 
Sbjct: 402  ARANFLPLPVVLSSVSRLVNWCVSFTPTRFDVFKLTDTALHGVFYAACQAVMYILCFRLR 461

Query: 262  LLLDDPKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISITKEM 83
             L  +  QR                    VCLPSVV+EF RQ+ A+ +            
Sbjct: 462  ELYAESTQRPLLKGLRLQQLIEHKLCPLKVCLPSVVEEFVRQATAIQLISYSGTVEPSSG 521

Query: 82   LESESSKSFGGVERLDMFFPFDPYLLK 2
             E  S KS+GG  RL+MFFPFDPYLL+
Sbjct: 522  FEVLSFKSYGGDNRLEMFFPFDPYLLR 548


>ref|XP_001775034.1| predicted protein [Physcomitrella patens] gi|162673621|gb|EDQ60141.1|
            predicted protein [Physcomitrella patens]
          Length = 655

 Score =  431 bits (1107), Expect = e-118
 Identities = 227/499 (45%), Positives = 313/499 (62%), Gaps = 10/499 (2%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            YN L E L+       +      + + ALSQ VS +NE  H +LL ++LGMS W ++ EV
Sbjct: 24   YNHLCEALRDPRLHGDEGAPELAVRINALSQCVSYLNERAHRTLLQYLLGMSVWTYSFEV 83

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXL--TSKMMLVSKMEQIL 1115
             D L+ F+VNL+ +NG FV  CLDMLVRN                 T  MM ++ M+++ 
Sbjct: 84   VDALLAFVVNLSTANGCFVPDCLDMLVRNFLPPSCGLPSFFDSFSRTGLMMGLTTMDKLK 143

Query: 1114 QKKTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMPHRYLALEWNALYIENM 935
             +            +R+H A+ Q  E+VPTA  RLQ I+++RMPHR    +W  LY+ENM
Sbjct: 144  SQ------------ERLHSALVQTVELVPTAAFRLQHIVVQRMPHRTCDKQWLTLYVENM 191

Query: 934  LRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHD-DLSKVYIFDMEMDDDYETEH 758
            LR+ENS++  ++G +ML  +VDRLIEIDVEIRWEDI  D D +KV++F M +DDD +   
Sbjct: 192  LRLENSSLSSVLGGQMLSLIVDRLIEIDVEIRWEDIMRDEDSNKVFMFHMNLDDDEDFRS 251

Query: 757  SRAPHKEKLGDVADKMDVLMEITLEHLKVCAEEGRLQQVYDTLMHSFQTTILNTHKSKFT 578
                    L ++ADKMD++M++TL+HL  C + G    V++TLM SFQTTIL+T+KSKFT
Sbjct: 252  DLTGALPTLDEMADKMDLIMDMTLDHLHTCVQNGHGDLVFETLMRSFQTTILDTYKSKFT 311

Query: 577  QFLIFYLCSLAPETCGAQFASMLCNVF-VSSRAPNTRMTAAAYLASFLSRAKYLPLSVVS 401
            QFLIFYLCSLAPETCG+ FAS+LC++F   +R PNTRM+AAAYLAS+L+RA YLPL+VV 
Sbjct: 312  QFLIFYLCSLAPETCGSTFASLLCDIFECKTRPPNTRMSAAAYLASYLARAAYLPLNVVM 371

Query: 400  SSIKRLVDWSLQYVS------NDDRKTMNPKVHRVFYSACQAIMYILCFRMNLLLDDPKQ 239
             S++RL+ W + Y        N    +++P +H VFY ACQA+MY+LCFR+  L +D + 
Sbjct: 372  DSVRRLLHWCVSYAQLAEDRRNPTMTSVDPVLHGVFYCACQAVMYVLCFRLKDLTEDQRL 431

Query: 238  RXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISITKEMLESESSKS 59
            +                    +CLPSVV EF +Q+    + +    S  ++   S++  S
Sbjct: 432  KRLLRNLPLQELVEHHLKPLTICLPSVVDEFVKQASIAQLVDCRQWSNIRDAAASQACGS 491

Query: 58   FGGVERLDMFFPFDPYLLK 2
            FGG  RLDMFFPFDPYLL+
Sbjct: 492  FGGEGRLDMFFPFDPYLLR 510


>ref|XP_001771048.1| predicted protein [Physcomitrella patens] gi|162677736|gb|EDQ64203.1|
            predicted protein [Physcomitrella patens]
          Length = 624

 Score =  419 bits (1076), Expect = e-114
 Identities = 224/473 (47%), Positives = 301/473 (63%), Gaps = 9/473 (1%)
 Frame = -2

Query: 1393 LQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDM 1214
            + ALSQ VS +NE  H +LL ++LGMS W ++ EV D L+ F+VNL+ +NG FV  CLDM
Sbjct: 25   INALSQTVSYLNERSHRTLLQYLLGMSIWTYSYEVVDALLSFVVNLSTANGCFVPDCLDM 84

Query: 1213 LVRNXXXXXXXXXXXXXXLTSKMMLVSKMEQILQKKTEHLARKKEVLDRVHLAIQQIAEI 1034
            LVRN                            L    + L    +VL+R+H A+ +  ++
Sbjct: 85   LVRNFLPPSCG---------------------LPSFFDSLGLLSQVLERLHSALVRTVDL 123

Query: 1033 VPTAVLRLQPIIIRRMPHRYLALEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEI 854
            VPTA  RLQ I+++RMPHR    +W ALY+ENMLR+E+S++   +G +ML  +VDRLIEI
Sbjct: 124  VPTAAFRLQHIVVQRMPHRTCDKQWLALYVENMLRLESSSLSSALGGQMLSLIVDRLIEI 183

Query: 853  DVEIRWEDI-GHDDLSKVYIFDMEM-DDDYETEHSRAPHKEKLGDVADKMDVLMEITLEH 680
            DVEIRWEDI   +D SKV++F M + DDD    +        L ++ADKMD++M++TL+H
Sbjct: 184  DVEIRWEDILREEDSSKVFMFHMNLEDDDLFGANDADEVLPTLDEMADKMDLIMDMTLDH 243

Query: 679  LKVCAEEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNV 500
            L  C + G    V++TLM SFQTTIL+T+KSKFTQFLIFYLCSLAP TCG  FAS+LC++
Sbjct: 244  LHTCVQNGHGDLVFETLMRSFQTTILDTYKSKFTQFLIFYLCSLAPSTCGNTFASLLCDI 303

Query: 499  FVS-SRAPNTRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVS------NDDRK 341
            F S +R PNTRM+AAAYLAS+L+RA YLPL+VV  S++RL+DW + Y        N    
Sbjct: 304  FESKTRPPNTRMSAAAYLASYLARAGYLPLTVVVESVRRLLDWCVSYAQLAQDRRNPTMT 363

Query: 340  TMNPKVHRVFYSACQAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXVCLPS 161
            T +P +H VFY ACQA+MY+LCFR+  L +D + +                    VCLPS
Sbjct: 364  TADPVLHGVFYCACQAVMYVLCFRLKDLTEDQRLKRVLRTLPLQELVEHHLKPLKVCLPS 423

Query: 160  VVQEFSRQSQAMHVFESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLK 2
            VV EF +Q+    + +    S T++    +S+ SFGG  RLDMFFPFDPYLL+
Sbjct: 424  VVDEFVKQASIAQLVDCRQWSNTRDATAVQSAGSFGGEGRLDMFFPFDPYLLR 476


>ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  403 bits (1035), Expect = e-109
 Identities = 233/509 (45%), Positives = 315/509 (61%), Gaps = 20/509 (3%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            YNQL+  +      DPD       +L+ALS AVS I+  HH SLL  I GMS WN++ +V
Sbjct: 44   YNQLVAVMHLSGRLDPDNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDV 103

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKMEQILQK 1109
             D L   I++LAASNG +VD CL MLV N               T     + K+     K
Sbjct: 104  MDALKGLIISLAASNGKYVDSCLTMLVSNF--------------TPPSYFLDKL-----K 144

Query: 1108 KTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMP---HRYLALEWNALYIEN 938
            +   L RK +VL RVH A++ I ++VP A  RL PI+++RMP   +++  L+   +Y EN
Sbjct: 145  EPHGLERKHQVLSRVHAALKSIFDLVPLAPTRLLPIVVQRMPTVHNKHERLKMIVVYTEN 204

Query: 937  MLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDDDYETEH 758
            ML++E+SA+GE++ S +LMAVVDRLI++D+EI W+DI HDD SK  IF+ME++D  E   
Sbjct: 205  MLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKG-IFEMELEDVEEA-- 261

Query: 757  SRAPHKEKLGD----------------VADKMDVLMEITLEHLKVCAEEGRLQQVYDTLM 626
              A   E++GD                +A+ +D LM +T EHL+ C   GRL +V++ L+
Sbjct: 262  --ADDAEQVGDELPSGSLSRKSLSGNLIAELLDSLMVLTFEHLESCEGTGRLIEVFEILL 319

Query: 625  HSFQTTILNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFVSS-RAPNTRMTAAAYL 449
             SFQ T+LN +KSKF QF++FY C+L PE CG +FA+ML +VFVS    P TRM+A +YL
Sbjct: 320  QSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMSAVSYL 379

Query: 448  ASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILCFR 269
            ASFLSRA++L    + S +KRLVDW L+Y  N     +NPK HRVFYS CQAIMY+LCFR
Sbjct: 380  ASFLSRARFLSPCFIVSLLKRLVDWCLEY-CNILGGDINPKAHRVFYSGCQAIMYVLCFR 438

Query: 268  MNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISITK 89
            M  ++D P+ +                    VCLPSVV EF +QS+A  +F      +  
Sbjct: 439  MRSIMDIPRLKSQLLLMPLETVLKHDLNPLKVCLPSVVSEFLQQSKAARLFTVSETFVFN 498

Query: 88   EMLESESSKSFGGVERLDMFFPFDPYLLK 2
            ++LESE S++FGG+ERLDMFFPFDP LLK
Sbjct: 499  DLLESELSRAFGGLERLDMFFPFDPCLLK 527


>ref|XP_006483561.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X3 [Citrus sinensis]
          Length = 534

 Score =  399 bits (1025), Expect = e-108
 Identities = 229/509 (44%), Positives = 315/509 (61%), Gaps = 20/509 (3%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            YNQL+  +      DPD       +L+ALS AVS I+  HH SLL  I GMS WN++ ++
Sbjct: 44   YNQLVAVMHLSGRLDPDNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDI 103

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKMEQILQK 1109
             D L   I++LAAS+G +VD CL MLV N               T     + K+     K
Sbjct: 104  MDALKGLIISLAASSGKYVDSCLTMLVGNF--------------TPPSYFLDKL-----K 144

Query: 1108 KTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMP---HRYLALEWNALYIEN 938
            +   L RK +VL RVH A++ I ++VP A +RL PI+++RMP   +++  L+   +Y EN
Sbjct: 145  EPHGLERKHQVLSRVHAALKSIFDLVPLAPMRLLPIVVQRMPTVHNKHERLKLIVVYTEN 204

Query: 937  MLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDDDYETEH 758
            ML++E+SA+GE++ S +LMAVVDRLI++D+EI W+DI HDD SK  IF+ME++D  E   
Sbjct: 205  MLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKG-IFEMELEDVEEA-- 261

Query: 757  SRAPHKEKLGD----------------VADKMDVLMEITLEHLKVCAEEGRLQQVYDTLM 626
              A   E++GD                +A+ +D L+ +T EHL+ C   GRL +V++ L+
Sbjct: 262  --ADDAEQVGDELPSGSISRKSLSGNLIAELLDSLLVLTFEHLESCEGTGRLIEVFEILL 319

Query: 625  HSFQTTILNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFVSS-RAPNTRMTAAAYL 449
             SFQ T+LN +KSKF QF++FY C+L PE CG +FA+ML +VFVS    P TRM++ +YL
Sbjct: 320  QSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMSSVSYL 379

Query: 448  ASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILCFR 269
            AS+LSRA++L    + S +KRLVDW L+Y  N     +NPK HRVFYS CQAIMY+LCFR
Sbjct: 380  ASYLSRARFLSPCFIVSLLKRLVDWCLEY-CNIPGGNINPKAHRVFYSGCQAIMYVLCFR 438

Query: 268  MNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISITK 89
            M  ++D P+ +                    VCLPSVV EF +QS+A  +F      I  
Sbjct: 439  MRSIMDVPRLKSQLLLMPLETVLKHNLNPLKVCLPSVVSEFLQQSKAARLFTVSETFIFN 498

Query: 88   EMLESESSKSFGGVERLDMFFPFDPYLLK 2
            ++LESE S+ FGG+ERLDMFFPFDP LLK
Sbjct: 499  DLLESELSRDFGGLERLDMFFPFDPCLLK 527


>ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  399 bits (1025), Expect = e-108
 Identities = 229/509 (44%), Positives = 315/509 (61%), Gaps = 20/509 (3%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            YNQL+  +      DPD       +L+ALS AVS I+  HH SLL  I GMS WN++ ++
Sbjct: 44   YNQLVAVMHLSGRLDPDNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDI 103

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKMEQILQK 1109
             D L   I++LAAS+G +VD CL MLV N               T     + K+     K
Sbjct: 104  MDALKGLIISLAASSGKYVDSCLTMLVGNF--------------TPPSYFLDKL-----K 144

Query: 1108 KTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMP---HRYLALEWNALYIEN 938
            +   L RK +VL RVH A++ I ++VP A +RL PI+++RMP   +++  L+   +Y EN
Sbjct: 145  EPHGLERKHQVLSRVHAALKSIFDLVPLAPMRLLPIVVQRMPTVHNKHERLKLIVVYTEN 204

Query: 937  MLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDDDYETEH 758
            ML++E+SA+GE++ S +LMAVVDRLI++D+EI W+DI HDD SK  IF+ME++D  E   
Sbjct: 205  MLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKG-IFEMELEDVEEA-- 261

Query: 757  SRAPHKEKLGD----------------VADKMDVLMEITLEHLKVCAEEGRLQQVYDTLM 626
              A   E++GD                +A+ +D L+ +T EHL+ C   GRL +V++ L+
Sbjct: 262  --ADDAEQVGDELPSGSISRKSLSGNLIAELLDSLLVLTFEHLESCEGTGRLIEVFEILL 319

Query: 625  HSFQTTILNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFVSS-RAPNTRMTAAAYL 449
             SFQ T+LN +KSKF QF++FY C+L PE CG +FA+ML +VFVS    P TRM++ +YL
Sbjct: 320  QSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMSSVSYL 379

Query: 448  ASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILCFR 269
            AS+LSRA++L    + S +KRLVDW L+Y  N     +NPK HRVFYS CQAIMY+LCFR
Sbjct: 380  ASYLSRARFLSPCFIVSLLKRLVDWCLEY-CNIPGGNINPKAHRVFYSGCQAIMYVLCFR 438

Query: 268  MNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISITK 89
            M  ++D P+ +                    VCLPSVV EF +QS+A  +F      I  
Sbjct: 439  MRSIMDVPRLKSQLLLMPLETVLKHNLNPLKVCLPSVVSEFLQQSKAARLFTVSETFIFN 498

Query: 88   EMLESESSKSFGGVERLDMFFPFDPYLLK 2
            ++LESE S+ FGG+ERLDMFFPFDP LLK
Sbjct: 499  DLLESELSRDFGGLERLDMFFPFDPCLLK 527


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  397 bits (1019), Expect = e-108
 Identities = 228/502 (45%), Positives = 318/502 (63%), Gaps = 13/502 (2%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            Y+QL+  L   E   PD+    + +L+ALS AVS I+  HH SLLS I GMS WN+  +V
Sbjct: 44   YDQLIGVLHHKERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDV 103

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKMEQILQK 1109
             D L+E I++LAAS+G ++D  LDMLV N                  M   S ++ +  K
Sbjct: 104  MDALLELILSLAASSGNYLDCSLDMLVSNF-----------------MPPYSLLDFL--K 144

Query: 1108 KTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMPHRYLALEWNALYIENMLR 929
            +   LARK +VL RVH  ++ IA++VP A  RL PI+I+RMP+ +       +Y+ENMLR
Sbjct: 145  QPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPIVIQRMPNVFTKEPLIMIYVENMLR 204

Query: 928  IENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMD------DDYE 767
            +E  AI E++G+ ML+A++DRL+++DVEI WE++  DD SK  IF+ME++      DD E
Sbjct: 205  LEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQDDCSK-GIFEMELEDMEEPADDVE 263

Query: 766  TE----HSRAPHKEKLGD--VADKMDVLMEITLEHLKVCAEEGRLQQVYDTLMHSFQTTI 605
             +    H  +  ++ LG   +A+K+D LM +T EHL+ C   GRL +V++TL+ SFQTT+
Sbjct: 264  NDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLESCEAGGRLIEVFETLVLSFQTTV 323

Query: 604  LNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFV-SSRAPNTRMTAAAYLASFLSRA 428
            LN  KSKF QF++FY C+L PE CG +FA +L + FV S+  P  RM+A AYLAS+LSR 
Sbjct: 324  LNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFVCSTFPPLNRMSAVAYLASYLSRG 383

Query: 427  KYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILCFRMNLLLDD 248
            K+L  S V++ ++RLV W L+Y    D   +NPK H+VFYS CQAIMY+LCFRM  +++ 
Sbjct: 384  KFLTASFVANILERLVVWCLEYCKIHD-GDINPKAHQVFYSGCQAIMYVLCFRMRSMMNV 442

Query: 247  PKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISITKEMLESES 68
            P  R                    VCLPS+V+EF RQ++A  +F      I  ++LESE 
Sbjct: 443  PHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESEL 502

Query: 67   SKSFGGVERLDMFFPFDPYLLK 2
            S++FGG+ERLDMFFPFDP LLK
Sbjct: 503  SRAFGGIERLDMFFPFDPCLLK 524


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 625

 Score =  392 bits (1008), Expect = e-106
 Identities = 225/505 (44%), Positives = 312/505 (61%), Gaps = 16/505 (3%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            YNQL+  +   +   PD+    +  L+ALS AVS I+   H SLL+ I  MS W++ S V
Sbjct: 44   YNQLVGVIHHRDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNV 103

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKMEQILQK 1109
             D L+E I++LA SNG +VD CLDMLV N                  M   S M+  L K
Sbjct: 104  MDALIELIISLAVSNGKYVDSCLDMLVNNF-----------------MPPNSYMD--LLK 144

Query: 1108 KTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMPHRYLALEWNALYIENMLR 929
            K   L RK+EVL RVH A++ I+++VP A LRL+  ++ +M   +       +Y+ENMLR
Sbjct: 145  KPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLR 204

Query: 928  IENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDDDYET----- 764
            +E  A+ E +G ++L A+VD+L+++DVEI W+DI  DD SK  IF+ME++DD +T     
Sbjct: 205  LEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSK-GIFEMELEDDDDTTDDIN 263

Query: 763  ----EHSRAPHKEKLGD--VADKMDVLMEITLEHLKVCAEEGRLQQVYDTLMHSFQTTIL 602
                E  R   +  LG   +A+ +D L+ +T EHL+ C  +GRL +V+D L+ SFQ T+L
Sbjct: 264  EDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVL 323

Query: 601  NTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFVS-SRAPNTRMTAAAYLASFLSRAK 425
              +KSKF QF++FY CSL PE CGA+FA  L ++FVS +  P  RM+A +YLASFLSR K
Sbjct: 324  TAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVSCNDPPLIRMSAVSYLASFLSRGK 383

Query: 424  YLPLSVVSSSIKRLVDWSLQYVSNDDRKTM----NPKVHRVFYSACQAIMYILCFRMNLL 257
            +L  S+V++ +KRLVDW L+Y      KT+    NPK H+VFYS CQAIMY+LCFRM  +
Sbjct: 384  FLTTSLVTTILKRLVDWCLEY-----GKTLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSI 438

Query: 256  LDDPKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISITKEMLE 77
            L+ P+ +                    VCLPS+V+EF RQ++  ++F      I   +LE
Sbjct: 439  LEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLE 498

Query: 76   SESSKSFGGVERLDMFFPFDPYLLK 2
            S+ S+SFGG+ERLDMFFPFDP LLK
Sbjct: 499  SDYSRSFGGLERLDMFFPFDPCLLK 523


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 626

 Score =  392 bits (1008), Expect = e-106
 Identities = 225/505 (44%), Positives = 312/505 (61%), Gaps = 16/505 (3%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            YNQL+  +   +   PD+    +  L+ALS AVS I+   H SLL+ I  MS W++ S V
Sbjct: 44   YNQLVGVIHHRDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNV 103

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKMEQILQK 1109
             D L+E I++LA SNG +VD CLDMLV N                  M   S M+  L K
Sbjct: 104  MDALIELIISLAVSNGKYVDSCLDMLVNNF-----------------MPPNSYMD--LLK 144

Query: 1108 KTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMPHRYLALEWNALYIENMLR 929
            K   L RK+EVL RVH A++ I+++VP A LRL+  ++ +M   +       +Y+ENMLR
Sbjct: 145  KPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLR 204

Query: 928  IENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDDDYET----- 764
            +E  A+ E +G ++L A+VD+L+++DVEI W+DI  DD SK  IF+ME++DD +T     
Sbjct: 205  LEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSK-GIFEMELEDDDDTTDDIN 263

Query: 763  ----EHSRAPHKEKLGD--VADKMDVLMEITLEHLKVCAEEGRLQQVYDTLMHSFQTTIL 602
                E  R   +  LG   +A+ +D L+ +T EHL+ C  +GRL +V+D L+ SFQ T+L
Sbjct: 264  EDSSELPRELSRRSLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVL 323

Query: 601  NTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFVS-SRAPNTRMTAAAYLASFLSRAK 425
              +KSKF QF++FY CSL PE CGA+FA  L ++FVS +  P  RM+A +YLASFLSR K
Sbjct: 324  TAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVSCNDPPLIRMSAVSYLASFLSRGK 383

Query: 424  YLPLSVVSSSIKRLVDWSLQYVSNDDRKTM----NPKVHRVFYSACQAIMYILCFRMNLL 257
            +L  S+V++ +KRLVDW L+Y      KT+    NPK H+VFYS CQAIMY+LCFRM  +
Sbjct: 384  FLTTSLVTTILKRLVDWCLEY-----GKTLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSI 438

Query: 256  LDDPKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISITKEMLE 77
            L+ P+ +                    VCLPS+V+EF RQ++  ++F      I   +LE
Sbjct: 439  LEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLE 498

Query: 76   SESSKSFGGVERLDMFFPFDPYLLK 2
            S+ S+SFGG+ERLDMFFPFDP LLK
Sbjct: 499  SDYSRSFGGLERLDMFFPFDPCLLK 523


>ref|XP_002524432.1| transcription initiation factor ia, putative [Ricinus communis]
            gi|223536316|gb|EEF37967.1| transcription initiation
            factor ia, putative [Ricinus communis]
          Length = 640

 Score =  392 bits (1008), Expect = e-106
 Identities = 223/512 (43%), Positives = 311/512 (60%), Gaps = 23/512 (4%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            Y+QL+  +   +   PD     L +L+ALS AVS I+E HH  LL  I GMS WN+  +V
Sbjct: 47   YDQLVGVMHHSQRLTPDDVALLLTSLKALSGAVSYIDECHHDRLLQSIFGMSIWNYGPDV 106

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKMEQILQK 1109
             + L+E I+ LAASNG ++D CL MLV N                  M L+      + K
Sbjct: 107  MEALLELIIALAASNGKYIDPCLKMLVTNF--------------VPPMYLID-----ILK 147

Query: 1108 KTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPII---IRRMPHRYLALEWNA----- 953
                 A+K++VL R+H A++ IA ++P A  RL   +   I+R+P  +   +++      
Sbjct: 148  LPRGQAKKEQVLSRLHTALEDIAHLIPMAASRLSTEVVSEIQRIPTTFKKDQYHEKDRVK 207

Query: 952  ----LYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSK-VYIFDM 788
                +Y+ENMLR+E+ AI E +GSRMLMAVVD+LI++DV I W+DI  DD  K ++  ++
Sbjct: 208  YRTEIYVENMLRLESGAIREFVGSRMLMAVVDKLIDLDVAIGWDDILRDDSCKGIFAIEL 267

Query: 787  E-----MDDDYETEHSRAPHK---EKLGD--VADKMDVLMEITLEHLKVCAEEGRLQQVY 638
            E      DDD   ++   P     + LG+   AD +D LM    EHL++CA   RL  V+
Sbjct: 268  EDADEVSDDDEYNDYGELPRTLSHKSLGENVAADLLDSLMVRIFEHLELCANNKRLNDVF 327

Query: 637  DTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFVSSRAPNTRMTAA 458
            +TL+ SF  TILNT+KSKF QF++FY C+L PE CG +FA  L + F     P TRM+A 
Sbjct: 328  ETLLDSFMLTILNTYKSKFAQFVMFYACALDPENCGVEFAERLRDRFTYGENPLTRMSAV 387

Query: 457  AYLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSACQAIMYIL 278
            AYLAS+L+RAK+LP++ V+S++KRLVDW  +Y  N D   MNPK HRVFYS CQAI+Y+L
Sbjct: 388  AYLASYLARAKFLPIAFVASTLKRLVDWCSEYCRNQD-GDMNPKAHRVFYSGCQAILYVL 446

Query: 277  CFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNIS 98
            CFRM+ ++D P  +                    VCLPS+V+EF +Q++A H+F +   S
Sbjct: 447  CFRMSSMMDIPWLKSQLLHMPLEQIMKHKLGPLKVCLPSIVEEFLKQAKAAHLFTTSQTS 506

Query: 97   ITKEMLESESSKSFGGVERLDMFFPFDPYLLK 2
              +++LESE SK FGG+ERLDMFFPFDP LL+
Sbjct: 507  SFEDVLESEFSKDFGGLERLDMFFPFDPCLLR 538


>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Vitis vinifera]
          Length = 636

 Score =  391 bits (1004), Expect = e-106
 Identities = 228/511 (44%), Positives = 320/511 (62%), Gaps = 22/511 (4%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            Y+QL+  L   E   PD+    + +L+ALS AVS I+  HH SLLS I GMS WN+  +V
Sbjct: 44   YDQLIGVLHHKERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDV 103

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKMEQILQK 1109
             D L+E I++LAAS+G ++D  LDMLV N                  M   S ++ +  K
Sbjct: 104  MDALLELILSLAASSGNYLDCSLDMLVSNF-----------------MPPYSLLDFL--K 144

Query: 1108 KTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMPHRYLALEWNAL------- 950
            +   LARK +VL RVH  ++ IA++VP A  RL PI+I+RMP+ +     +++       
Sbjct: 145  QPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPIVIQRMPNVFTKEPVSSICSTLFRI 204

Query: 949  --YIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDD 776
              Y+ENMLR+E  AI E++G+ ML+A++DRL+++DVEI WE++  DD SK  IF+ME++D
Sbjct: 205  QIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQDDCSKG-IFEMELED 263

Query: 775  ------DYETE----HSRAPHKEKLGD--VADKMDVLMEITLEHLKVCAEEGRLQQVYDT 632
                  D E +    H  +  ++ LG   +A+K+D LM +T EHL+ C   GRL +V++T
Sbjct: 264  MEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLESCEAGGRLIEVFET 323

Query: 631  LMHSFQTTILNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFV-SSRAPNTRMTAAA 455
            L+ SFQTT+LN  KSKF QF++FY C+L PE CG +FA +L + FV S+  P  RM+A A
Sbjct: 324  LVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFVCSTFPPLNRMSAVA 383

Query: 454  YLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILC 275
            YLAS+LSR K+L  S V++ ++RLV W L+Y    D   +NPK H+VFYS CQAIMY+LC
Sbjct: 384  YLASYLSRGKFLTASFVANILERLVVWCLEYCKIHD-GDINPKAHQVFYSGCQAIMYVLC 442

Query: 274  FRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISI 95
            FRM  +++ P  R                    VCLPS+V+EF RQ++A  +F      I
Sbjct: 443  FRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVSETFI 502

Query: 94   TKEMLESESSKSFGGVERLDMFFPFDPYLLK 2
              ++LESE S++FGG+ERLDMFFPFDP LLK
Sbjct: 503  FSDLLESELSRAFGGIERLDMFFPFDPCLLK 533


>gb|EOX90600.1| Major facilitator superfamily protein isoform 1 [Theobroma cacao]
            gi|508698705|gb|EOX90601.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508698706|gb|EOX90602.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
          Length = 628

 Score =  387 bits (993), Expect = e-105
 Identities = 226/499 (45%), Positives = 305/499 (61%), Gaps = 10/499 (2%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            YNQL+  +   +   PD+      TL+AL  AVS I+   H SLLS I  MS WN+   V
Sbjct: 43   YNQLVAVMHHSKRLAPDEVALLETTLKALGGAVSCIDTTLHDSLLSAIFSMSMWNYGPHV 102

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKMEQILQK 1109
            AD L E IV+LA SNG ++D CL MLV N               T     + K+     K
Sbjct: 103  ADALAELIVSLAISNGKYLDLCLGMLVSNF--------------TPPPYFLDKL-----K 143

Query: 1108 KTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMPHRYLALEWNALYIENMLR 929
                L RK +VL  VH A ++I++ +P A LRL  I+++ MP  Y       +Y+ENML+
Sbjct: 144  LPRGLERKGQVLSLVHAAFKKISDYIPLAPLRLSNIVLQGMPTIYHKDRAIVIYVENMLK 203

Query: 928  IENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDDDYETEHS-- 755
            +E+  IGE++GS MLMAVVD+LIE+D+EI W+ I  DD SK  IF+ME++D  E E S  
Sbjct: 204  LESGEIGELVGSTMLMAVVDQLIELDLEIGWDAILQDDFSK-GIFEMELEDVDEVEESAE 262

Query: 754  ------RAPHKEKLGD-VADKMDVLMEITLEHLKVCAEEGRLQQVYDTLMHSFQTTILNT 596
                  R   K   G+ +A+ +D L+ +T EHL+ C   GRL +V++TL+ SFQ T+++ 
Sbjct: 263  QDTGEFRLSRKSLAGNSIAELLDNLLVLTFEHLESCERAGRLAKVFETLLQSFQITVMSA 322

Query: 595  HKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFVSSRAPN-TRMTAAAYLASFLSRAKYL 419
            +KSKFTQF++FY C+L P+ CG +FA+ML ++FV    P   RM+A AYLAS+LSRAK+L
Sbjct: 323  YKSKFTQFVMFYACALDPDYCGMRFATMLADLFVQDSHPQPIRMSAVAYLASYLSRAKFL 382

Query: 418  PLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILCFRMNLLLDDPKQ 239
              S++SS +KRLVDW L+Y    D   +NP  HRVFYS CQAIMY+LCFRM + +D P+ 
Sbjct: 383  SASLISSMLKRLVDWCLEYGKTPD-GDINPNAHRVFYSGCQAIMYVLCFRMKVFMDVPRL 441

Query: 238  RXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISITKEMLESESSKS 59
            +                    VCLPSVV+EF RQS+A  +F      +   +LESE S++
Sbjct: 442  K-MQLLMPMEQILKHKLNPLKVCLPSVVEEFLRQSKAACLFTVSKTFVFDGLLESELSRA 500

Query: 58   FGGVERLDMFFPFDPYLLK 2
            FGG+ERLD FFPFDP LLK
Sbjct: 501  FGGLERLDTFFPFDPCLLK 519


>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Glycine max]
            gi|571527491|ref|XP_006599254.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Glycine max]
          Length = 627

 Score =  385 bits (989), Expect = e-104
 Identities = 219/502 (43%), Positives = 309/502 (61%), Gaps = 13/502 (2%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            Y++L+  L   +  +PD+    + TL+ALS AVS I+  HH SLL  +  MS WN+  ++
Sbjct: 44   YDELVGYLHPKKNLNPDEVAILVTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNYGIDI 103

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKMEQILQK 1109
             D L+E I++LAASNG ++D CL+MLV++                    L+  + Q    
Sbjct: 104  MDALLELIISLAASNGKYIDWCLEMLVKHF--------------VPPFYLLDSLRQ---- 145

Query: 1108 KTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMPHRYLALEWNALYIENMLR 929
                + RK +VL RVH A+++IA++VP A LRL PI+I++MP  +       +Y+ENMLR
Sbjct: 146  -ENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQKMPSVFSKETEIVMYVENMLR 204

Query: 928  IENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDD-----DYET 764
            +E+ AIGE +GS ML A+VDRL+E+DVEI W+ I  +D     IF+ME++D     D + 
Sbjct: 205  LESGAIGETVGSIMLPALVDRLLELDVEIGWDGILQEDAKG--IFEMELEDVTEFADEDE 262

Query: 763  EHSRAPHKEKLGD-------VADKMDVLMEITLEHLKVCAEEGRLQQVYDTLMHSFQTTI 605
                 P  E L         V +K+D LM +   HL+ C   GRL +V+DTL+ SFQ T+
Sbjct: 263  NCDSMPPSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQSSGRLTEVFDTLLASFQRTV 322

Query: 604  LNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVF-VSSRAPNTRMTAAAYLASFLSRA 428
            LN +KSKFTQ+++FY C+L PE CG +FA +L ++F      P TRM+AAAYLAS+L+RA
Sbjct: 323  LNAYKSKFTQYVMFYACALDPEGCGVKFAMVLADMFGCDVNPPITRMSAAAYLASYLTRA 382

Query: 427  KYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILCFRMNLLLDD 248
            K+L  ++V++ I+ LVDW   Y    D   MNP+ H+VFYS CQAIMYILCFRM  L+D 
Sbjct: 383  KFLSAALVTNIIQSLVDWCYAYCKLRD-FDMNPRAHQVFYSGCQAIMYILCFRMRSLMDI 441

Query: 247  PKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISITKEMLESES 68
            P+ +                    VCLP+VV EF RQ++A  +F +    +  +MLES+ 
Sbjct: 442  PRLKLQLLNMPMEAILKHKLSPLKVCLPTVVVEFLRQAKAAQLFMASESFVFDDMLESDL 501

Query: 67   SKSFGGVERLDMFFPFDPYLLK 2
            SK+FGG++RLDMFFPFDP LLK
Sbjct: 502  SKAFGGIDRLDMFFPFDPCLLK 523


>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Glycine max]
          Length = 628

 Score =  379 bits (972), Expect = e-102
 Identities = 216/502 (43%), Positives = 306/502 (60%), Gaps = 13/502 (2%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            Y++L+  L   +  +PD+    + TL+ALS AVS I+  HH SLL  +  MS WN   ++
Sbjct: 44   YDELVGYLHPKKHLNPDEVAILVTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNCGIDI 103

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKMEQILQK 1109
             D L+E I++LA SNG ++D CL+MLV+N                    L+  + Q    
Sbjct: 104  MDALLELIISLAVSNGKYIDWCLEMLVKNF--------------VPPFYLLDSLRQ---- 145

Query: 1108 KTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMPHRYLALEWNALYIENMLR 929
                + RK +VL RVH A+++IA++VP A LRL PI+I++MP  +       +Y+ENMLR
Sbjct: 146  -ENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQKMPSVFSKETEIVMYVENMLR 204

Query: 928  IENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDD--------- 776
            +E+ A+GE +GS ML A+VDRL+E+DVEI W+ I  +D     IF+ME++D         
Sbjct: 205  LESGALGETVGSTMLPALVDRLLELDVEIGWDGILQEDAKG--IFEMELEDVTEFTDEDE 262

Query: 775  --DYETEHSRAPHKEKLGD-VADKMDVLMEITLEHLKVCAEEGRLQQVYDTLMHSFQTTI 605
              D          K   G+ V +K+D LM +   HL+ C   GRL +V++TL+ SFQ T+
Sbjct: 263  NCDSMLSSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQNSGRLAEVFNTLLASFQRTV 322

Query: 604  LNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVF-VSSRAPNTRMTAAAYLASFLSRA 428
            LN +KSKFTQF++FY C+L PE CG +FA +L ++F   +  P TRM+A AYLAS+L+RA
Sbjct: 323  LNAYKSKFTQFVMFYACALDPEGCGVKFAMVLADMFGGDANPPITRMSAVAYLASYLTRA 382

Query: 427  KYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILCFRMNLLLDD 248
            K+L  ++V+S I+ LVDW   Y    D   MNP+ H+VFYS CQAIMYI+CFRM  L+D 
Sbjct: 383  KFLSAALVTSIIQSLVDWCYAYCKFRD-FDMNPRAHQVFYSGCQAIMYIMCFRMRSLMDV 441

Query: 247  PKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISITKEMLESES 68
            P+ +                    VCLP+VV EF RQ++A  +F +    +  +MLES+ 
Sbjct: 442  PRLKLQLLNMPMEAILKHKLSPLKVCLPTVVVEFLRQAKAAQLFMASESFVFDDMLESDL 501

Query: 67   SKSFGGVERLDMFFPFDPYLLK 2
            SK+FGG++RLDMFFPFDP LLK
Sbjct: 502  SKAFGGMDRLDMFFPFDPCLLK 523


>gb|ESW06108.1| hypothetical protein PHAVU_010G020100g [Phaseolus vulgaris]
          Length = 620

 Score =  378 bits (970), Expect = e-102
 Identities = 214/502 (42%), Positives = 306/502 (60%), Gaps = 13/502 (2%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            Y++L+  L   +  +PD+    + TL+ALS AV  I+ +HH SLL  +  MS WN+ +EV
Sbjct: 44   YDELVGYLHPKKNLNPDEVAILVTTLRALSGAVCCIDPNHHESLLFAVSRMSLWNYGTEV 103

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKMEQILQK 1109
             D L+E I++LAASNG ++D CL+MLV++                    L+  +      
Sbjct: 104  MDALLELIISLAASNGKYIDWCLEMLVKH--------------FVPPFYLIDSL-----N 144

Query: 1108 KTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMPHRYLALEWNALYIENMLR 929
                + RK +VL RVH A+++IA++VP A LRL PI+++ MP+ +       +Y ENM +
Sbjct: 145  NENGIDRKNKVLSRVHAALKEIADLVPLAPLRLCPIVVQNMPNVFSKEREIVIYFENMFK 204

Query: 928  IENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDD-----DYET 764
            +E  AIGEI+G+ +L A+VDRL+E+DVEI W+ I  +D     IFDME++D     D + 
Sbjct: 205  LEGGAIGEIVGATILPALVDRLLELDVEIGWDGILQEDSRG--IFDMELEDIIKLADEDD 262

Query: 763  EHSRAPHKEKL-------GDVADKMDVLMEITLEHLKVCAEEGRLQQVYDTLMHSFQTTI 605
                 P  E L         V +K+D L+ + L HL+ C   GRL +V+D L+ SFQ T+
Sbjct: 263  NCHNMPQSELLNRKNLQGNQVVEKLDSLIVLALLHLESCQSSGRLTEVFDVLLPSFQKTV 322

Query: 604  LNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFVSS-RAPNTRMTAAAYLASFLSRA 428
            LN +KSKFTQF++FY C+L PE CG +FA +L ++F S    P TRM+A AYLAS+LSRA
Sbjct: 323  LNAYKSKFTQFVMFYACALDPEGCGVKFAMVLADMFASDLNPPITRMSAVAYLASYLSRA 382

Query: 427  KYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILCFRMNLLLDD 248
            K+L  ++V++ I+ LVD    Y    D   +NP+ H+VFYS CQAIMYI+CFRM  L+D 
Sbjct: 383  KFLSAALVTTIIQSLVDLCYAYCKFRD-SDLNPRAHQVFYSGCQAIMYIMCFRMKSLMDV 441

Query: 247  PKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISITKEMLESES 68
            P+ +                    VCLP+VV EF RQ++A  +F +    +  +MLES+ 
Sbjct: 442  PRLKLQLLNMPMEAIWKHKLSPLKVCLPTVVVEFLRQAKAAKLFMASESFVFDDMLESDL 501

Query: 67   SKSFGGVERLDMFFPFDPYLLK 2
            SK+FGG++RLDMFFPFDP LLK
Sbjct: 502  SKAFGGMDRLDMFFPFDPCLLK 523


>ref|XP_006483467.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Citrus sinensis]
          Length = 535

 Score =  372 bits (954), Expect = e-100
 Identities = 211/459 (45%), Positives = 288/459 (62%), Gaps = 20/459 (4%)
 Frame = -2

Query: 1318 MSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMML 1139
            MS WN++ +V D L   I++LAASNG +VD CL MLV N               T     
Sbjct: 1    MSMWNYDPDVMDALKGLIISLAASNGKYVDSCLTMLVSNF--------------TPPSYF 46

Query: 1138 VSKMEQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMP---HRYLA 968
            + K+     K+   L RK +VL RVH A++ I ++VP A  RL PI+++RMP   +++  
Sbjct: 47   LDKL-----KEPHGLERKHQVLSRVHAALKSIFDLVPLAPTRLLPIVVQRMPTVHNKHER 101

Query: 967  LEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDM 788
            L+   +Y ENML++E+SA+GE++ S +LMAVVDRLI++D+EI W+DI HDD SK  IF+M
Sbjct: 102  LKMIVVYTENMLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKG-IFEM 160

Query: 787  EMDDDYETEHSRAPHKEKLGD----------------VADKMDVLMEITLEHLKVCAEEG 656
            E++D  E     A   E++GD                +A+ +D LM +T EHL+ C   G
Sbjct: 161  ELEDVEEA----ADDAEQVGDELPSGSLSRKSLSGNLIAELLDSLMVLTFEHLESCEGTG 216

Query: 655  RLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFVSS-RAP 479
            RL +V++ L+ SFQ T+LN +KSKF QF++FY C+L PE CG +FA+ML +VFVS    P
Sbjct: 217  RLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVSGLYPP 276

Query: 478  NTRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSAC 299
             TRM+A +YLASFLSRA++L    + S +KRLVDW L+Y  N     +NPK HRVFYS C
Sbjct: 277  LTRMSAVSYLASFLSRARFLSPCFIVSLLKRLVDWCLEY-CNILGGDINPKAHRVFYSGC 335

Query: 298  QAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHV 119
            QAIMY+LCFRM  ++D P+ +                    VCLPSVV EF +QS+A  +
Sbjct: 336  QAIMYVLCFRMRSIMDIPRLKSQLLLMPLETVLKHDLNPLKVCLPSVVSEFLQQSKAARL 395

Query: 118  FESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLK 2
            F      +  ++LESE S++FGG+ERLDMFFPFDP LLK
Sbjct: 396  FTVSETFVFNDLLESELSRAFGGLERLDMFFPFDPCLLK 434


>ref|XP_002307198.2| RNA polymerase 1 specific transcription initiation factor RRN3 family
            protein [Populus trichocarpa] gi|550338523|gb|EEE94194.2|
            RNA polymerase 1 specific transcription initiation factor
            RRN3 family protein [Populus trichocarpa]
          Length = 637

 Score =  371 bits (952), Expect = e-100
 Identities = 216/510 (42%), Positives = 303/510 (59%), Gaps = 21/510 (4%)
 Frame = -2

Query: 1468 YNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEV 1289
            Y+QL+  L   +   PDK    L +L+ALS AVS IN+  H SLL  I GMS WN   +V
Sbjct: 51   YHQLVGVLHHRDRSAPDKVALLLTSLKALSGAVSYINDVDHVSLLQSIFGMSMWNCAPDV 110

Query: 1288 ADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMMLVSKMEQILQK 1109
             D L+E I+ LAASNG +VD CLDMLV N                     +  ME  + +
Sbjct: 111  MDALLELIICLAASNGKYVDLCLDMLVNN--------------------FMPPMESDMLR 150

Query: 1108 KTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMPHRYLALEWNA-------- 953
                 A+K +VL RVH  ++ I ++VP A L+L   ++++ P  +   ++N         
Sbjct: 151  HPRGQAKKDQVLPRVHTGLEVIVDLVPLAALKLSTNVVQKRP-MFFRKDFNMDRLKCRME 209

Query: 952  LYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDDD 773
            +Y++NML +E  AI E +G  ML+ VV+ ++E+DV I W+++  DD SK  IF ME++D+
Sbjct: 210  IYLKNMLMLEGGAIREFVGHSMLVEVVNMMLELDVAIGWDELLRDDPSKG-IFTMELEDE 268

Query: 772  YET--EHSRAPHKE--------KLGD--VADKMDVLMEITLEHLKVCAEEGRLQQVYDTL 629
             E   +  +A   E         LG    AD +D LM   LEHL+ CA++ RL +V++TL
Sbjct: 269  EEEAGDDGQANDGELPSTLTLRNLGKNVTADLLDSLMIQFLEHLEACADKKRLSEVFETL 328

Query: 628  MHSFQTTILNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFVSS-RAPNTRMTAAAY 452
            + SF  TILNT+KSKF+QF IFY C+L PE CG +FA  L ++F+S+   P TRM+A AY
Sbjct: 329  LSSFMATILNTYKSKFSQFTIFYACALDPENCGVKFAQTLVDLFISTCNPPVTRMSAVAY 388

Query: 451  LASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILCF 272
            L+S+L+R K+L  + V + +KRLVDW L+Y    D   MNPK H+VFYSACQ IMY+LCF
Sbjct: 389  LSSYLARGKFLSAAFVMNMLKRLVDWCLRYCEEQD-SDMNPKAHQVFYSACQGIMYVLCF 447

Query: 271  RMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHVFESLNISIT 92
             M  +++ P  +                    VCLPS+V EF +Q++A H+F      I 
Sbjct: 448  HMKSIMNVPTLKSQLLLMPIEPILKHKLGPLEVCLPSIVNEFLKQAKAAHLFTISKAFIF 507

Query: 91   KEMLESESSKSFGGVERLDMFFPFDPYLLK 2
            +++LES+ S+ FGG+ERLDMFFPFDP LLK
Sbjct: 508  EDLLESDLSRDFGGLERLDMFFPFDPCLLK 537


>ref|XP_006483560.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X2 [Citrus sinensis]
          Length = 535

 Score =  368 bits (944), Expect = 4e-99
 Identities = 207/459 (45%), Positives = 288/459 (62%), Gaps = 20/459 (4%)
 Frame = -2

Query: 1318 MSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXLTSKMML 1139
            MS WN++ ++ D L   I++LAAS+G +VD CL MLV N               T     
Sbjct: 1    MSMWNYDPDIMDALKGLIISLAASSGKYVDSCLTMLVGNF--------------TPPSYF 46

Query: 1138 VSKMEQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAVLRLQPIIIRRMP---HRYLA 968
            + K+     K+   L RK +VL RVH A++ I ++VP A +RL PI+++RMP   +++  
Sbjct: 47   LDKL-----KEPHGLERKHQVLSRVHAALKSIFDLVPLAPMRLLPIVVQRMPTVHNKHER 101

Query: 967  LEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDM 788
            L+   +Y ENML++E+SA+GE++ S +LMAVVDRLI++D+EI W+DI HDD SK  IF+M
Sbjct: 102  LKLIVVYTENMLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKG-IFEM 160

Query: 787  EMDDDYETEHSRAPHKEKLGD----------------VADKMDVLMEITLEHLKVCAEEG 656
            E++D  E     A   E++GD                +A+ +D L+ +T EHL+ C   G
Sbjct: 161  ELEDVEEA----ADDAEQVGDELPSGSISRKSLSGNLIAELLDSLLVLTFEHLESCEGTG 216

Query: 655  RLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPETCGAQFASMLCNVFVSS-RAP 479
            RL +V++ L+ SFQ T+LN +KSKF QF++FY C+L PE CG +FA+ML +VFVS    P
Sbjct: 217  RLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVSGLYPP 276

Query: 478  NTRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSAC 299
             TRM++ +YLAS+LSRA++L    + S +KRLVDW L+Y  N     +NPK HRVFYS C
Sbjct: 277  LTRMSSVSYLASYLSRARFLSPCFIVSLLKRLVDWCLEY-CNIPGGNINPKAHRVFYSGC 335

Query: 298  QAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXVCLPSVVQEFSRQSQAMHV 119
            QAIMY+LCFRM  ++D P+ +                    VCLPSVV EF +QS+A  +
Sbjct: 336  QAIMYVLCFRMRSIMDVPRLKSQLLLMPLETVLKHNLNPLKVCLPSVVSEFLQQSKAARL 395

Query: 118  FESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLK 2
            F      I  ++LESE S+ FGG+ERLDMFFPFDP LLK
Sbjct: 396  FTVSETFIFNDLLESELSRDFGGLERLDMFFPFDPCLLK 434