BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00012833
         (766 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-li...   378   e-102
gb|ABK23650.1| unknown [Picea sitchensis] gi|224286688|gb|ACN410...   378   e-102
ref|XP_006472823.1| PREDICTED: replication factor C subunit 4-li...   377   e-102
ref|XP_006472822.1| PREDICTED: replication factor C subunit 4-li...   377   e-102
ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [S...   377   e-102
ref|XP_006434256.1| hypothetical protein CICLE_v10001485mg [Citr...   377   e-102
ref|XP_006434255.1| hypothetical protein CICLE_v10001485mg [Citr...   377   e-102
ref|XP_003602047.1| Replication factor C subunit [Medicago trunc...   376   e-102
ref|XP_002441912.1| hypothetical protein SORBIDRAFT_08g004780 [S...   375   e-102
ref|XP_004977230.1| PREDICTED: replication factor C subunit 4-li...   375   e-101
ref|NP_001185061.1| replication factor C subunit 4 [Arabidopsis ...   374   e-101
ref|NP_564148.1| replication factor C subunit 4 [Arabidopsis tha...   374   e-101
ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-li...   374   e-101
ref|XP_002307456.1| replication factor C 37 kDa family protein [...   374   e-101
ref|XP_003526646.1| PREDICTED: replication factor C subunit 2-li...   373   e-101
ref|XP_006416276.1| hypothetical protein EUTSA_v10008129mg [Eutr...   372   e-101
ref|XP_004142636.1| PREDICTED: replication factor C subunit 4-li...   372   e-101
ref|NP_001066296.2| Os12g0176500 [Oryza sativa Japonica Group] g...   372   e-101
gb|AFK40832.1| unknown [Lotus japonicus]                              372   e-101
ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-li...   372   e-101

>ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-like isoformX1 [Glycine
           max] gi|571452162|ref|XP_006578961.1| PREDICTED:
           replication factor C subunit 4-like isoform X2 [Glycine
           max] gi|571452164|ref|XP_006578962.1| PREDICTED:
           replication factor C subunit 4-like isoform X3 [Glycine
           max]
          Length = 342

 Score =  378 bits (971), Expect = e-102
 Identities = 185/230 (80%), Positives = 210/230 (91%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P L  T  WVEKYRP+QV DV+HQ+EVV+ LTN++ TG+ PH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPILQSTQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T + KSG+PCPPFKII+
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKSGYPCPPFKIIV 120

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNYVSRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           SRIL+I  EEGL LD +AL TLSSIS GDLRRAITYLQSAARL+G+SIS+
Sbjct: 181 SRILYISQEEGLCLDAEALSTLSSISHGDLRRAITYLQSAARLFGSSISS 230


>gb|ABK23650.1| unknown [Picea sitchensis] gi|224286688|gb|ACN41047.1| unknown
           [Picea sitchensis]
          Length = 339

 Score =  378 bits (971), Expect = e-102
 Identities = 186/230 (80%), Positives = 211/230 (91%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P  + + QWVEKYRP+QV DV+HQEEVV+ALTN++ TGNLPHLLFYGPPGTGKTT+AL
Sbjct: 1   MAPIHSSSQQWVEKYRPKQVKDVAHQEEVVRALTNTLETGNLPHLLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+ Y+SRVLELNASDDRGINVVRTKIKDFAA++V +  + SG+ CPPFKIII
Sbjct: 61  AIAHQLFGPE-YKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGNTNSGYLCPPFKIII 119

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPL E++M+
Sbjct: 120 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLVEDIMT 179

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
            RILHIC EEG+ LD DAL  LSSIS+GDLRRAITYLQSAARLYG+SIS+
Sbjct: 180 GRILHICKEEGVHLDSDALTMLSSISEGDLRRAITYLQSAARLYGSSISS 229


>ref|XP_006472823.1| PREDICTED: replication factor C subunit 4-like isoform X2 [Citrus
           sinensis]
          Length = 324

 Score =  377 bits (968), Expect = e-102
 Identities = 181/230 (78%), Positives = 208/230 (90%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P L  +  WVEKYRP+QV DV+HQEEVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIK FAA++V + + + G+PCPP+KIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIII 120

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           SR+LHICNEEGL LD +AL TLSSIS GDLRRAITYLQ AARL+G+SI++
Sbjct: 181 SRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLFGSSITS 230


>ref|XP_006472822.1| PREDICTED: replication factor C subunit 4-like isoform X1 [Citrus
           sinensis]
          Length = 342

 Score =  377 bits (968), Expect = e-102
 Identities = 181/230 (78%), Positives = 208/230 (90%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P L  +  WVEKYRP+QV DV+HQEEVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIK FAA++V + + + G+PCPP+KIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIII 120

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           SR+LHICNEEGL LD +AL TLSSIS GDLRRAITYLQ AARL+G+SI++
Sbjct: 181 SRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLFGSSITS 230


>ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [Sorghum bicolor]
           gi|241922268|gb|EER95412.1| hypothetical protein
           SORBIDRAFT_01g045530 [Sorghum bicolor]
          Length = 339

 Score =  377 bits (968), Expect = e-102
 Identities = 182/230 (79%), Positives = 212/230 (92%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P + ++  WVEKYRPRQV DV+HQEEV++ LTN++ T +LPH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPLVPMSQPWVEKYRPRQVKDVAHQEEVIRVLTNTLQTADLPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+A++L+GP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T R K+G+PCPP+KIII
Sbjct: 61  AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTAR-KAGYPCPPYKIII 119

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVMS
Sbjct: 120 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 179

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           SRI+HICNEEGL LD  AL TLS+IS GDLRRAITYLQSAARL+G+S+S+
Sbjct: 180 SRIMHICNEEGLNLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSLSS 229


>ref|XP_006434256.1| hypothetical protein CICLE_v10001485mg [Citrus clementina]
           gi|557536378|gb|ESR47496.1| hypothetical protein
           CICLE_v10001485mg [Citrus clementina]
          Length = 382

 Score =  377 bits (967), Expect = e-102
 Identities = 181/230 (78%), Positives = 208/230 (90%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P L  +  WVEKYRP+QV DV+HQEEVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 41  MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 100

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIK FAA++V + + + G+PCPP+KIII
Sbjct: 101 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIII 160

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVMS
Sbjct: 161 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 220

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           SR+LHICNEEGL LD +AL TLSSIS GDLRRAITYLQ AARL+G+SI++
Sbjct: 221 SRVLHICNEEGLNLDAEALSTLSSISHGDLRRAITYLQGAARLFGSSITS 270


>ref|XP_006434255.1| hypothetical protein CICLE_v10001485mg [Citrus clementina]
           gi|557536377|gb|ESR47495.1| hypothetical protein
           CICLE_v10001485mg [Citrus clementina]
          Length = 337

 Score =  377 bits (967), Expect = e-102
 Identities = 181/230 (78%), Positives = 208/230 (90%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P L  +  WVEKYRP+QV DV+HQEEVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 41  MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 100

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIK FAA++V + + + G+PCPP+KIII
Sbjct: 101 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIII 160

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVMS
Sbjct: 161 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 220

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           SR+LHICNEEGL LD +AL TLSSIS GDLRRAITYLQ AARL+G+SI++
Sbjct: 221 SRVLHICNEEGLNLDAEALSTLSSISHGDLRRAITYLQGAARLFGSSITS 270


>ref|XP_003602047.1| Replication factor C subunit [Medicago truncatula]
           gi|357520353|ref|XP_003630465.1| Replication factor C
           subunit [Medicago truncatula]
           gi|217073528|gb|ACJ85124.1| unknown [Medicago
           truncatula] gi|355491095|gb|AES72298.1| Replication
           factor C subunit [Medicago truncatula]
           gi|355524487|gb|AET04941.1| Replication factor C subunit
           [Medicago truncatula] gi|388492316|gb|AFK34224.1|
           unknown [Medicago truncatula]
          Length = 339

 Score =  376 bits (965), Expect = e-102
 Identities = 179/230 (77%), Positives = 210/230 (91%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P +  T  WVEKYRP+QV DV+HQEEVV+ LTN++ TG+ PH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPIIQSTQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T + K+G+PCPP+KII+
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNKPKNGYPCPPYKIIV 120

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS 180

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           SRI++IC EEG+ LD + L TLS+IS GDLRRAITYLQSAARL+G+SIS+
Sbjct: 181 SRIVYICKEEGIYLDAEGLSTLSNISQGDLRRAITYLQSAARLFGSSISS 230


>ref|XP_002441912.1| hypothetical protein SORBIDRAFT_08g004780 [Sorghum bicolor]
           gi|241942605|gb|EES15750.1| hypothetical protein
           SORBIDRAFT_08g004780 [Sorghum bicolor]
          Length = 339

 Score =  375 bits (963), Expect = e-102
 Identities = 181/230 (78%), Positives = 211/230 (91%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P + ++  WVEKYRPRQV DV+HQEEV++ LTN++ T +LPH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPLVPMSQPWVEKYRPRQVKDVAHQEEVIRVLTNTLQTADLPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+A++L+GP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T R K+G+PCPP+KIII
Sbjct: 61  AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTAR-KAGYPCPPYKIII 119

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPL SRCAKFRFKPL EEVMS
Sbjct: 120 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLVSRCAKFRFKPLSEEVMS 179

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           +RI+HICNEEGL LD  AL TLS+IS GDLRRAITYLQSAARL+G+SIS+
Sbjct: 180 NRIMHICNEEGLNLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSISS 229


>ref|XP_004977230.1| PREDICTED: replication factor C subunit 4-like [Setaria italica]
          Length = 339

 Score =  375 bits (962), Expect = e-101
 Identities = 182/230 (79%), Positives = 211/230 (91%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P + ++  WVEKYRPRQV DV+HQEEVV+ LTN++ T +LPH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPLVPMSQPWVEKYRPRQVKDVAHQEEVVRVLTNTLQTADLPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+A++L+GP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T R K+G+PCPP+K+II
Sbjct: 61  AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTAR-KAGYPCPPYKMII 119

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVMS
Sbjct: 120 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 179

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           SRI+HICNEE L LD  AL TLS+IS GDLRRAITYLQSAARL+G+SIS+
Sbjct: 180 SRIMHICNEESLNLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSISS 229


>ref|NP_001185061.1| replication factor C subunit 4 [Arabidopsis thaliana]
           gi|332192021|gb|AEE30142.1| protein embryo defective
           1968 [Arabidopsis thaliana]
          Length = 341

 Score =  374 bits (961), Expect = e-101
 Identities = 181/230 (78%), Positives = 208/230 (90%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P L  +  WVEKYRP+QV DV+HQEEVV+ LTN++ T + PH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V +   +SG+PCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           +RILHICNEEGL LD +AL TLSSIS GDLRRAITYLQSA RL+G++I++
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITS 230


>ref|NP_564148.1| replication factor C subunit 4 [Arabidopsis thaliana]
           gi|75163839|sp|Q93ZX1.1|RFC4_ARATH RecName:
           Full=Replication factor C subunit 4; Short=AtRFC4;
           AltName: Full=Activator 1 subunit 4; AltName:
           Full=Protein EMBRYO DEFECTIVE 1968
           gi|15810343|gb|AAL07059.1| putative replication factor
           [Arabidopsis thaliana] gi|17065122|gb|AAL32715.1|
           Similar replication factor C, 37-kDa subunit
           [Arabidopsis thaliana] gi|21536935|gb|AAM61276.1|
           putative replication factor [Arabidopsis thaliana]
           gi|34098857|gb|AAQ56811.1| At1g21690 [Arabidopsis
           thaliana] gi|332192018|gb|AEE30139.1| protein embryo
           defective 1968 [Arabidopsis thaliana]
          Length = 339

 Score =  374 bits (961), Expect = e-101
 Identities = 181/230 (78%), Positives = 208/230 (90%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P L  +  WVEKYRP+QV DV+HQEEVV+ LTN++ T + PH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V +   +SG+PCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           +RILHICNEEGL LD +AL TLSSIS GDLRRAITYLQSA RL+G++I++
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITS 230


>ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-like [Cicer arietinum]
          Length = 341

 Score =  374 bits (960), Expect = e-101
 Identities = 179/230 (77%), Positives = 209/230 (90%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P +  +  WVEKYRP+QV DV+HQEEV++ LTN++ TG+ PH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPIIPSSQPWVEKYRPKQVKDVAHQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T + K+G+PCPP+KII+
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKNGYPCPPYKIIV 120

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS 180

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           SRIL+IC EEGL LD + L  LSSIS GDLRRAITYLQSAARL+G+SIS+
Sbjct: 181 SRILYICKEEGLYLDAEGLSALSSISQGDLRRAITYLQSAARLFGSSISS 230


>ref|XP_002307456.1| replication factor C 37 kDa family protein [Populus trichocarpa]
           gi|222856905|gb|EEE94452.1| replication factor C 37 kDa
           family protein [Populus trichocarpa]
          Length = 342

 Score =  374 bits (959), Expect = e-101
 Identities = 178/230 (77%), Positives = 209/230 (90%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P L  + QWVEKYRP+Q+ DV+HQ+EVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPLLQSSQQWVEKYRPKQIKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+L+GP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V + + +  +PCPP+KIII
Sbjct: 61  AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIII 120

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMS 180

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           +RILHICNEEGL LD +AL TLSS+S GDLRRAITYLQ AARL+G+SIS+
Sbjct: 181 NRILHICNEEGLTLDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISS 230


>ref|XP_003526646.1| PREDICTED: replication factor C subunit 2-like isoform 1 [Glycine
           max]
          Length = 342

 Score =  373 bits (958), Expect = e-101
 Identities = 182/230 (79%), Positives = 209/230 (90%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P L  +  WVEKYRP+QV DV+HQ+EVV+ LTN++ TG+ PH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T + K+G+PCPPFKII+
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQCKNGYPCPPFKIIV 120

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNYVSRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           SRIL+I  EEGL LD +AL TLS IS GDLRRAITYLQSAARL+G+SIS+
Sbjct: 181 SRILYISQEEGLCLDAEALSTLSFISHGDLRRAITYLQSAARLFGSSISS 230


>ref|XP_006416276.1| hypothetical protein EUTSA_v10008129mg [Eutrema salsugineum]
           gi|557094047|gb|ESQ34629.1| hypothetical protein
           EUTSA_v10008129mg [Eutrema salsugineum]
          Length = 339

 Score =  372 bits (956), Expect = e-101
 Identities = 180/230 (78%), Positives = 207/230 (90%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P L  +  WVEKYRP+QV DV+HQEEVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V +   + G+PCP FKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNNRQGGYPCPSFKIII 120

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVM+
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMT 180

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           +RILHICNEEGL L  +AL TLSSIS GDLRRAITYLQSAARL+G++I++
Sbjct: 181 NRILHICNEEGLNLGGEALSTLSSISQGDLRRAITYLQSAARLFGSTITS 230


>ref|XP_004142636.1| PREDICTED: replication factor C subunit 4-like [Cucumis sativus]
          Length = 336

 Score =  372 bits (956), Expect = e-101
 Identities = 181/230 (78%), Positives = 208/230 (90%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P L  +  WVEKYRP+QV DV+HQ+EVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFA ++V++ + + G+PCPPFKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMET+SKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
            RILHI NEEGL LD +AL TLSSIS GDLRRAITYLQSAARL+G+SIS+
Sbjct: 181 KRILHIGNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISS 230


>ref|NP_001066296.2| Os12g0176500 [Oryza sativa Japonica Group]
           gi|75173107|sp|Q9FXM3.1|RFC2_ORYSJ RecName:
           Full=Replication factor C subunit 2; Short=OsRFC2;
           AltName: Full=Activator 1 subunit 2
           gi|10798806|dbj|BAB16441.1| replication factor C 37 kDa
           subunit [Oryza sativa Japonica Group]
           gi|77553810|gb|ABA96606.1| Activator 1 37 kDa subunit,
           putative, expressed [Oryza sativa Japonica Group]
           gi|125535960|gb|EAY82448.1| hypothetical protein
           OsI_37665 [Oryza sativa Indica Group]
           gi|125578677|gb|EAZ19823.1| hypothetical protein
           OsJ_35406 [Oryza sativa Japonica Group]
           gi|215737297|dbj|BAG96226.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255670097|dbj|BAF29315.2| Os12g0176500 [Oryza sativa
           Japonica Group]
          Length = 339

 Score =  372 bits (956), Expect = e-101
 Identities = 182/230 (79%), Positives = 210/230 (91%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P +  +  WVEKYRPRQV DV+HQEEVV+ LT ++ T +LPH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+A++L+GP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V + R K G+PCPP+KIII
Sbjct: 61  AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSAR-KGGYPCPPYKIII 119

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EEVMS
Sbjct: 120 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 179

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           +RILHICNEEGL LD  AL TLS+IS+GDLRRAITYLQSAARL+G+SIS+
Sbjct: 180 NRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGSSISS 229


>gb|AFK40832.1| unknown [Lotus japonicus]
          Length = 342

 Score =  372 bits (956), Expect = e-101
 Identities = 178/230 (77%), Positives = 208/230 (90%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P +  +  WVEKYRP+QV DV++Q+EVV+ LTN++ TG+ PH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPIVQSSQPWVEKYRPKQVKDVAYQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIKDFAA++V T   K G+PCPP+KII+
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNPKKGGYPCPPYKIIV 120

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMTEDAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EE+MS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIST 3
           SRIL+ICNEEGL LD + L TLSSIS GDLRRAITYLQS+ARL+G+ IS+
Sbjct: 181 SRILYICNEEGLHLDAEGLSTLSSISQGDLRRAITYLQSSARLFGSHISS 230


>ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-like [Solanum
           lycopersicum]
          Length = 339

 Score =  372 bits (955), Expect = e-101
 Identities = 181/229 (79%), Positives = 208/229 (90%)
 Frame = -3

Query: 692 MSPALNITHQWVEKYRPRQVADVSHQEEVVKALTNSINTGNLPHLLFYGPPGTGKTTSAL 513
           M+P +  +  WVEKYRP+QV DV+HQ+EVV+ LTN++ T N PH+LFYGPPGTGKTT+AL
Sbjct: 1   MAPVMQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60

Query: 512 AVAHELFGPDLYRSRVLELNASDDRGINVVRTKIKDFAALSVATVRSKSGHPCPPFKIII 333
           A+AH+LFGP+LY+SRVLELNASDDRGINVVRTKIK+FAA++V + R +SG+PCPPFKIII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSNR-QSGYPCPPFKIII 119

Query: 332 LDEADSMTEDAQNALRRTMETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLGEEVMS 153
           LDEADSMT+DAQNALRRTMETYSKVTRF FICNY+SRIIEPLASRCAKFRFKPL EE+M 
Sbjct: 120 LDEADSMTQDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMG 179

Query: 152 SRILHICNEEGLQLDPDALKTLSSISDGDLRRAITYLQSAARLYGTSIS 6
           SRILHIC EEGL LD +AL TLSSIS GDLRRAITYLQSAARL+G+SIS
Sbjct: 180 SRILHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSIS 228