BLASTX nr result

ID: Ephedra25_contig00012810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00012810
         (1526 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310998.1| SNF7 family protein [Populus trichocarpa] gi...    64   2e-07
ref|XP_002316482.1| SNF7 family protein [Populus trichocarpa] gi...    64   2e-07
gb|ABR17167.1| unknown [Picea sitchensis]                              59   6e-06

>ref|XP_002310998.1| SNF7 family protein [Populus trichocarpa]
           gi|222850818|gb|EEE88365.1| SNF7 family protein [Populus
           trichocarpa]
          Length = 236

 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
 Frame = +1

Query: 70  IEDDI*DLATYDSEM*EFMRQNYSVPKQLDEEYILGELDALGDDMVM-PQDDQVPAYL*S 246
           ++D++ DL    SE+ E + ++YSVP  +DEE ++GELDAL  DM M  + D VP+YL  
Sbjct: 131 LQDEMMDLMDVSSEIQETLGRSYSVPDDIDEEDLMGELDALEADMAMETESDGVPSYLQP 190

Query: 247 NKIVDA*VERNSPSSSTR*EAQTSQYDNQDTGEFAINSAAR 369
           +K  D   E N PS+ T   A   + +NQ   E  + +  R
Sbjct: 191 DKEPDFDSELNLPSAPTGHAAPAGRANNQAEDELGLPAVPR 231


>ref|XP_002316482.1| SNF7 family protein [Populus trichocarpa]
           gi|222865522|gb|EEF02653.1| SNF7 family protein [Populus
           trichocarpa]
          Length = 236

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
 Frame = +1

Query: 70  IEDDI*DLATYDSEM*EFMRQNYSVPKQLDEEYILGELDALGDDMVM-PQDDQVPAYL*S 246
           ++D++ DL    +E+ E + ++Y+VP  +DEE ++GELDAL  DM M  + D VP+YL  
Sbjct: 131 LQDEMMDLMDVSNEIQETLGRSYNVPDDIDEEELMGELDALEADMGMETESDGVPSYLQP 190

Query: 247 NKIVDA*VERNSPSSSTR*EAQTSQYDNQDTGEFAINSAAR 369
           +K  D   E N PS+ T   A  S+Y+ Q   E  + +  R
Sbjct: 191 DKESDLDAELNLPSAPTGQGAPASRYNAQAEDELGLPAVPR 231


>gb|ABR17167.1| unknown [Picea sitchensis]
          Length = 235

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
 Frame = +1

Query: 70  IEDDI*DLATYDSEM*EFMRQNYSVPKQLDEEYILGELDALGDDM-VMPQDDQVPAYL*S 246
           ++D++ DL    +E+ + + ++YSVP  +DE+ ++GELDAL  DM    Q D VPAYL  
Sbjct: 131 MQDEMMDLMDISTEIQDSLGRSYSVPDDIDEDELMGELDALEADMGSETQTDGVPAYLQP 190

Query: 247 NKIVDA*VERNSPSSSTR*EAQTSQYDNQDTGEFAINSAAR 369
           +K  D   E N PS+ +   A   Q + Q T EF + +  R
Sbjct: 191 DKESDLDSELNLPSAPSG-RATVPQANQQTTDEFGLPTVPR 230


Top