BLASTX nr result
ID: Ephedra25_contig00012802
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00012802
(1180 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001774482.1| predicted protein [Physcomitrella patens] gi... 379 e-102
ref|XP_002970284.1| hypothetical protein SELMODRAFT_147068 [Sela... 378 e-102
ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fr... 374 e-101
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri... 373 e-101
tpg|DAA58033.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea m... 372 e-100
tpg|DAA58032.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea m... 372 e-100
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi... 372 e-100
ref|XP_002456182.1| hypothetical protein SORBIDRAFT_03g031750 [S... 371 e-100
ref|XP_006363964.1| PREDICTED: DNA repair helicase XPB1-like [So... 371 e-100
ref|XP_004975516.1| PREDICTED: DNA repair helicase XPB1-like [Se... 370 e-100
gb|ESW32085.1| hypothetical protein PHAVU_002G291500g [Phaseolus... 369 2e-99
ref|XP_006439502.1| hypothetical protein CICLE_v100190881mg, par... 369 2e-99
ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like iso... 368 3e-99
ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like iso... 367 4e-99
gb|EMJ11549.1| hypothetical protein PRUPE_ppa001762mg [Prunus pe... 367 4e-99
ref|XP_006285201.1| hypothetical protein CARUB_v10006557mg [Caps... 367 7e-99
ref|XP_002978280.1| hypothetical protein SELMODRAFT_418040 [Sela... 363 1e-97
dbj|BAB08508.1| DNA excision repair cross-complementing protein ... 361 3e-97
ref|NP_568591.1| DNA repair helicase XPB2 [Arabidopsis thaliana]... 361 3e-97
ref|XP_002966290.1| hypothetical protein SELMODRAFT_230853 [Sela... 359 1e-96
>ref|XP_001774482.1| predicted protein [Physcomitrella patens] gi|162674194|gb|EDQ60706.1|
predicted protein [Physcomitrella patens]
Length = 734
Score = 379 bits (974), Expect = e-102
Identities = 203/427 (47%), Positives = 264/427 (61%), Gaps = 40/427 (9%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D++ RPLW+ D I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 21 ELKPDHSNRPLWVCADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 80
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ + I+ LD LSKT +P I FI+ T+N + +E P +
Sbjct: 81 AVSVGLETETIITVLDRLSKTKLPKEILDFIRGSTQNYGKVKLVLQKNRYFVESPFPEVL 140
Query: 376 -----DRVYSRISHAVLEKKQISNTHAVL------------------------------- 447
D SR A E+ + ++ +
Sbjct: 141 QALLRDDTISRARLASSEEPGVGSSSFTVSRAPHETGAADPELLGGDDAVADAEEKDIHS 200
Query: 448 -EMNPSKVVEARATC--RTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKM 618
E++PS+V + C +NYP++EEYD++ND PTLDIKL +AQ RPYQ KS+ KM
Sbjct: 201 FEIDPSQVEHVKQRCLPNALNYPMLEEYDFRNDNVNPTLDIKLKPQAQPRPYQEKSLSKM 260
Query: 619 FVNGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHAS 798
F NG+ARSG+IVLPCGAGKSL GV AA R+ K VLC A +VSV+QWAFQF+ W+ +
Sbjct: 261 FGNGRARSGIIVLPCGAGKSLVGVSAACRISKSVLCLATNAVSVDQWAFQFKLWSTVGDH 320
Query: 799 KVQSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHV 978
++ TSD+K + F ++VTTY+M + G+RS++S+ I+ I+ REWGL+LMDEVHV
Sbjct: 321 QISRFTSDSKER-FRGSVGVVVTTYNMVAFGGKRSEESQKIIEEIQNREWGLLLMDEVHV 379
Query: 979 VPAKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKV 1158
VPA FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ GY+A V
Sbjct: 380 VPAHMFRKVISITKSHCKLGLTATLVREDERISDLNFLIGPKLYEANWLDLVKGGYIANV 439
Query: 1159 TCFEVLC 1179
C EV C
Sbjct: 440 QCAEVWC 446
>ref|XP_002970284.1| hypothetical protein SELMODRAFT_147068 [Selaginella moellendorffii]
gi|300161800|gb|EFJ28414.1| hypothetical protein
SELMODRAFT_147068 [Selaginella moellendorffii]
Length = 713
Score = 378 bits (970), Expect = e-102
Identities = 202/422 (47%), Positives = 263/422 (62%), Gaps = 35/422 (8%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D+ +RPLW+ D I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 7 ELKPDHEKRPLWVGPDGHIFLETFSPLYKQAYDFLIAIAEPVCRPEHMHEYNLTPHSLYA 66
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ Q ++ L+ LSK +P I FIKE T N + +E P +
Sbjct: 67 AVSVGLETQTVITVLERLSKARLPQEIVNFIKESTLNYGKVKLVLQKNRYFVESSYPEIL 126
Query: 376 DRV-----------YSRIS--HAVLEKKQISNTHAV-------------------LEMNP 459
+RV +S S H K +SN E++P
Sbjct: 127 ERVLKDDVISRARIFSEASAEHGFTVNKSLSNATTEQDLLAGDEVAAGEEKDVMSFEIDP 186
Query: 460 SKVVEARATC--RTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGK 633
++V + C +NYP++EEYD++ND+ P L I+L +AQ RPYQ KS+ KMF NG+
Sbjct: 187 AQVEHVKQRCLPSALNYPMLEEYDFRNDSVNPDLSIELKPQAQPRPYQEKSLSKMFGNGR 246
Query: 634 ARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSV 813
ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWAFQF+ W+ + ++
Sbjct: 247 ARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQISRF 306
Query: 814 TSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKN 993
TSD+K K F + ++VTTY+M + G+RS++SE ++ I+ REWGL+LMDEVHVVPA
Sbjct: 307 TSDSKDK-FKSNVGVVVTTYNMVAFKGKRSEESEKVIELIKSREWGLLLMDEVHVVPAHM 365
Query: 994 FREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEV 1173
FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ GY+A V C EV
Sbjct: 366 FRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGYIANVQCAEV 425
Query: 1174 LC 1179
C
Sbjct: 426 WC 427
>ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fragaria vesca subsp.
vesca]
Length = 768
Score = 374 bits (960), Expect = e-101
Identities = 207/426 (48%), Positives = 263/426 (61%), Gaps = 39/426 (9%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D+ RPLW D I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 55 ELKPDHLNRPLWACADGRIFLETFSALYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 114
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ Q I+ LD LSKT +P + FI T N + +E P +
Sbjct: 115 AVSVGLETQTIISVLDKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYYVESPFPEVL 174
Query: 376 -----DRVYSR---ISHAVLEK----------------------------KQISNTHAVL 447
D V S+ +S A EK + THA
Sbjct: 175 KKLLRDDVISKARIVSEAANEKGGFTISKTLGEIAADSSGLLNEAELAAAAEEKETHA-F 233
Query: 448 EMNPSKVVEARATC--RTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMF 621
E++PS+V + + C +NYP++EEYD++NDT P LD++L +AQ RPYQ KS+ KMF
Sbjct: 234 EIDPSQVEKVKERCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMF 293
Query: 622 VNGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASK 801
NG+ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWAFQF+ W+ +
Sbjct: 294 GNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDEH 353
Query: 802 VQSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVV 981
+ TSD+K + F A ++VTTY+M + G+RS++SE I+ I REWGL+LMDEVHVV
Sbjct: 354 ICRFTSDSKER-FRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVV 412
Query: 982 PAKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVT 1161
PA+ FR+ +A TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ G++A V
Sbjct: 413 PAQMFRKVIAITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQ 472
Query: 1162 CFEVLC 1179
C EV C
Sbjct: 473 CAEVWC 478
>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
helicase, putative [Ricinus communis]
Length = 768
Score = 373 bits (958), Expect = e-101
Identities = 206/428 (48%), Positives = 265/428 (61%), Gaps = 41/428 (9%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK+D+A RPLW D I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 55 ELKLDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 114
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ + I+ L+ LSKT +P + FI T N +++E P +
Sbjct: 115 AVSVGLETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYLVESPFPEVL 174
Query: 376 -----DRVYSRI-----------------------SH----------AVLEKKQISNTHA 441
D V SR SH A E+K+ TH+
Sbjct: 175 KRLLKDEVISRARLVSEAHVNGSFTISKTAGEIGTSHDGLLNEAELAAAAEEKE---THS 231
Query: 442 VLEMNPSKVVEARATC--RTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDK 615
E++PS+V + C +NYP++EEYD++NDT P LD++L AQ RPYQ KS+ K
Sbjct: 232 -FEVDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSK 290
Query: 616 MFVNGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHA 795
MF NG+ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWAFQF+ W+ +
Sbjct: 291 MFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFQLWSTIRE 350
Query: 796 SKVQSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVH 975
++ TSD+K + F A ++VTTY+M + G+RS++SE I+ I REWGL+LMDEVH
Sbjct: 351 EQICRFTSDSKER-FQGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVH 409
Query: 976 VVPAKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAK 1155
VVPA FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ G++A
Sbjct: 410 VVPAHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIAN 469
Query: 1156 VTCFEVLC 1179
V C EV C
Sbjct: 470 VQCAEVWC 477
>tpg|DAA58033.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea mays]
Length = 767
Score = 372 bits (956), Expect = e-100
Identities = 208/425 (48%), Positives = 260/425 (61%), Gaps = 38/425 (8%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELKVD+A RPLW D I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 58 ELKVDHASRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 117
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ I+ L LSKT +P I FI T N + +E P +
Sbjct: 118 AVSVGLETSTIISVLSKLSKTKLPREIIDFIHGSTANYGKVKLVLKKNRYFVESPFPEVL 177
Query: 376 -----DRVYSRI-----------SHAVLEKK-QISNTHAVL------------------E 450
D V SR S V + QI++ H L E
Sbjct: 178 STLLRDEVISRARISPEDSLGAPSFTVSKTSGQIASGHEDLLNGMEIAAATEDKETHSFE 237
Query: 451 MNPSKVVEARATC--RTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFV 624
++PS+V + C +NYP++EEYD++NDT P LD++L +A+ RPYQ KS+ KMF
Sbjct: 238 IDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQARPRPYQEKSLSKMFG 297
Query: 625 NGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKV 804
NG+ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWAFQF+ W+ + +
Sbjct: 298 NGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDENI 357
Query: 805 QSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVP 984
TSD K K F A ++VTTY+M + G+RS+DSE I+ I REWGL+LMDEVHVVP
Sbjct: 358 SRFTSDNKEK-FTGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVP 416
Query: 985 AKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTC 1164
A FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ G++A V C
Sbjct: 417 AHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 476
Query: 1165 FEVLC 1179
EV C
Sbjct: 477 AEVWC 481
>tpg|DAA58032.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea mays]
Length = 702
Score = 372 bits (956), Expect = e-100
Identities = 208/425 (48%), Positives = 260/425 (61%), Gaps = 38/425 (8%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELKVD+A RPLW D I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 58 ELKVDHASRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 117
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ I+ L LSKT +P I FI T N + +E P +
Sbjct: 118 AVSVGLETSTIISVLSKLSKTKLPREIIDFIHGSTANYGKVKLVLKKNRYFVESPFPEVL 177
Query: 376 -----DRVYSRI-----------SHAVLEKK-QISNTHAVL------------------E 450
D V SR S V + QI++ H L E
Sbjct: 178 STLLRDEVISRARISPEDSLGAPSFTVSKTSGQIASGHEDLLNGMEIAAATEDKETHSFE 237
Query: 451 MNPSKVVEARATC--RTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFV 624
++PS+V + C +NYP++EEYD++NDT P LD++L +A+ RPYQ KS+ KMF
Sbjct: 238 IDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQARPRPYQEKSLSKMFG 297
Query: 625 NGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKV 804
NG+ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWAFQF+ W+ + +
Sbjct: 298 NGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDENI 357
Query: 805 QSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVP 984
TSD K K F A ++VTTY+M + G+RS+DSE I+ I REWGL+LMDEVHVVP
Sbjct: 358 SRFTSDNKEK-FTGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVP 416
Query: 985 AKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTC 1164
A FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ G++A V C
Sbjct: 417 AHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 476
Query: 1165 FEVLC 1179
EV C
Sbjct: 477 AEVWC 481
>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
Length = 771
Score = 372 bits (955), Expect = e-100
Identities = 204/429 (47%), Positives = 264/429 (61%), Gaps = 42/429 (9%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELKVD++ RPLW D I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 57 ELKVDHSNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 116
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ + I+ L LSKT +P + FI T N + +E P +
Sbjct: 117 AVSVGLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVL 176
Query: 376 DRVY-------SRISH--------------------------------AVLEKKQISNTH 438
+ SRISH A E+K+ TH
Sbjct: 177 KTLLRDEVISRSRISHEGSTGNDGFTISKTVGEIEGRHDELINEAELAAAAEEKE---TH 233
Query: 439 AVLEMNPSKVVEARATC--RTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVD 612
+ E++P++V + C +NYP++EEYD++NDT P LD++L +AQ RPYQ KS+
Sbjct: 234 S-FEVDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLS 292
Query: 613 KMFVNGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLH 792
KMF NG+ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWAFQF+ W+ +
Sbjct: 293 KMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIR 352
Query: 793 ASKVQSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEV 972
++ TSD+K + F A ++VTTY+M + G+RS++SE I+ I REWGL+LMDEV
Sbjct: 353 DEQICRFTSDSKER-FRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEV 411
Query: 973 HVVPAKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLA 1152
HVVPA FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ G++A
Sbjct: 412 HVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIA 471
Query: 1153 KVTCFEVLC 1179
V C EV C
Sbjct: 472 NVQCAEVWC 480
>ref|XP_002456182.1| hypothetical protein SORBIDRAFT_03g031750 [Sorghum bicolor]
gi|241928157|gb|EES01302.1| hypothetical protein
SORBIDRAFT_03g031750 [Sorghum bicolor]
Length = 767
Score = 371 bits (953), Expect = e-100
Identities = 207/425 (48%), Positives = 260/425 (61%), Gaps = 38/425 (8%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELKVD+A RPLW D I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 58 ELKVDHASRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 117
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ I+ L LSKT +P I FI T N + +E P +
Sbjct: 118 AVSVGLETSTIISVLSKLSKTKLPREIIDFIHASTANYGKVKLVLKKNRYFVESPFPEVL 177
Query: 376 -----DRVYSRI-----------SHAVLEKK-QISNTHAVL------------------E 450
D V SR S V + QI++ H L E
Sbjct: 178 SNLLRDEVISRARISPEDSLGAPSFTVSKTSGQIASGHEDLLNGMEIAAATEDKETHSFE 237
Query: 451 MNPSKVVEARATC--RTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFV 624
++PS+V + C +NYP++EEYD++NDT P L+++L +A+ RPYQ KS+ KMF
Sbjct: 238 IDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLEMELKPQARPRPYQEKSLSKMFG 297
Query: 625 NGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKV 804
NG+ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWAFQF+ W+ + +
Sbjct: 298 NGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKDEHI 357
Query: 805 QSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVP 984
TSD K K F A ++VTTY+M + G+RS+DSE I+ I REWGL+LMDEVHVVP
Sbjct: 358 SRFTSDNKEK-FTGMASVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVP 416
Query: 985 AKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTC 1164
A FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ G++A V C
Sbjct: 417 AHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 476
Query: 1165 FEVLC 1179
EV C
Sbjct: 477 AEVWC 481
>ref|XP_006363964.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
Length = 728
Score = 371 bits (952), Expect = e-100
Identities = 190/395 (48%), Positives = 258/395 (65%), Gaps = 8/395 (2%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D+ RPLW+ D + LETSS Y QA DF IAIAEP SR + HEY +T SLY
Sbjct: 42 ELKPDHENRPLWVCCDGRVFLETSSPIYHQASDFLIAIAEPVSRPNSIHEYNLTPHSLYA 101
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEGIPSAID 378
AVS + I+ L+ LSKT++P + FI+ T N + IE +
Sbjct: 102 AVSVSLQTHTIISVLNKLSKTNLPKEVVDFIQSSTSNYGKVKLVLKKNRYFIESPCPLV- 160
Query: 379 RVYSRISHAVLEKKQISNT------HAVLEMNPSKVVEARATC--RTINYPLVEEYDYKN 534
+ + + V+ + +I+NT E++P++V + C +NYP++EEYD++N
Sbjct: 161 -LKTLLKDDVISRARIANTIEEEEAEYSFEIDPAQVESVKQRCLPNALNYPMLEEYDFRN 219
Query: 535 DTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVRLGK 714
DT P LDI+L AQ RPYQ+KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R+ K
Sbjct: 220 DTVNPDLDIELKINAQPRPYQVKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRINK 279
Query: 715 PVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYGYTG 894
LC A +VSV+QWA+QF W+ + ++ T+D+K + F A ++VTTY+M + G
Sbjct: 280 SCLCLATNAVSVDQWAYQFRLWSTIRDDQICRFTTDSKEQ-FRGDAGVVVTTYNMVAFGG 338
Query: 895 QRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLREDDAI 1074
+RS++SE ++ I REWGL+L+DEVHVVPA+ FR+ ++ TKSHCKLGLTATL+RED+ I
Sbjct: 339 KRSEESEKLIEQIRNREWGLLLLDEVHVVPAQMFRKVISITKSHCKLGLTATLVREDERI 398
Query: 1075 DDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLC 1179
DL F+IGPKLYEANW DL + G++A V C EV C
Sbjct: 399 TDLNFLIGPKLYEANWSDLAKGGFIANVQCAEVWC 433
>ref|XP_004975516.1| PREDICTED: DNA repair helicase XPB1-like [Setaria italica]
Length = 765
Score = 370 bits (949), Expect = e-100
Identities = 203/428 (47%), Positives = 258/428 (60%), Gaps = 41/428 (9%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D+A RPLW D I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 58 ELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 117
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ I+ L LSKT +P I FI T N + +E P +
Sbjct: 118 AVSVGLETSTIISVLSKLSKTKLPREIIDFIHGSTANYGKVKLVLKKNRYFVESPFPEVL 177
Query: 376 DRVYSRISHAVLEKKQIS--------------------------------------NTHA 441
+ ++ V+ K +IS TH+
Sbjct: 178 SNL---LNDDVISKARISPEDSLGASSFTISKTSGQASGHEELLNGMDLAAATEDKETHS 234
Query: 442 VLEMNPSKVVEARATC--RTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDK 615
E++PS+V + C +NYP++EEYD++NDT P LD++L +A+ RPYQ KS+ K
Sbjct: 235 -FEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQARPRPYQEKSLSK 293
Query: 616 MFVNGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHA 795
MF NG+ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWAFQF+ W+ +
Sbjct: 294 MFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIKD 353
Query: 796 SKVQSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVH 975
+ TSD K K F A ++VTTY+M + G+RS+DSE I+ I REWGL+LMDEVH
Sbjct: 354 DHISRFTSDNKEK-FRGMAGVVVTTYNMVAFGGKRSEDSEKIIEEIRNREWGLLLMDEVH 412
Query: 976 VVPAKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAK 1155
VVPA FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ G++A
Sbjct: 413 VVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIAN 472
Query: 1156 VTCFEVLC 1179
V C EV C
Sbjct: 473 VQCAEVWC 480
>gb|ESW32085.1| hypothetical protein PHAVU_002G291500g [Phaseolus vulgaris]
Length = 768
Score = 369 bits (946), Expect = 2e-99
Identities = 199/424 (46%), Positives = 262/424 (61%), Gaps = 37/424 (8%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D+ RPLW + I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 56 ELKQDHTNRPLWACGNGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 115
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ + ++ L+ LSKT +P + +FI + T N + +E P +
Sbjct: 116 AVSVGLETETVISVLNKLSKTKLPKEMIKFIHDSTANYGKVKLVLKKNRYFVESPFPEVL 175
Query: 376 DRVY--SRISHAVLEKK--------------QISNTHAVL------------------EM 453
+ IS A + + +I TH L E+
Sbjct: 176 KTLLRDDAISRARIISENVNGDGFTISKAAGEIEGTHDELLNEAEVAAVAEEKETHSFEV 235
Query: 454 NPSKVVEARATC--RTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVN 627
+PS+V + C +NYP++EEYD++NDT P LD++L +AQ RPYQ KS+ KMF N
Sbjct: 236 DPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGN 295
Query: 628 GKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKVQ 807
G+ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWAFQF+ W+ + ++
Sbjct: 296 GRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQIC 355
Query: 808 SVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVPA 987
TSD+K + F A ++VTTY+M + G+RS++SE I+ I REWGL+LMDEVHVVPA
Sbjct: 356 RFTSDSKER-FRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPA 414
Query: 988 KNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCF 1167
FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ G++A V C
Sbjct: 415 HMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCA 474
Query: 1168 EVLC 1179
EV C
Sbjct: 475 EVWC 478
>ref|XP_006439502.1| hypothetical protein CICLE_v100190881mg, partial [Citrus clementina]
gi|557541764|gb|ESR52742.1| hypothetical protein
CICLE_v100190881mg, partial [Citrus clementina]
Length = 435
Score = 369 bits (946), Expect = 2e-99
Identities = 194/385 (50%), Positives = 250/385 (64%), Gaps = 1/385 (0%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D+A RPLW D I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 63 ELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 122
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ + I+ L+ LSKT +P + FI T N +++E P +
Sbjct: 123 AVSVGLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYLVESPFPEVL 182
Query: 376 DRVYSRISHAVLEKKQISNTHAVLEMNPSKVVEARATCRTINYPLVEEYDYKNDTGCPTL 555
R+ L+ IS V E+ V+ R +NYP++EEYD++ND P L
Sbjct: 183 KRL--------LQDDVISRARIVSEVEN---VKQRCLPNALNYPMLEEYDFRNDNVNPDL 231
Query: 556 DIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFAN 735
+++L AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R+ K LC A
Sbjct: 232 NMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLAT 291
Query: 736 TSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSE 915
+VSV+QWAFQF+ W+ + ++ TSD+K + F A ++VTTY+M + G+RS++SE
Sbjct: 292 NAVSVDQWAFQFKLWSTIQDDQICRFTSDSKER-FRGNAGVVVTTYNMVAFGGKRSEESE 350
Query: 916 AIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFII 1095
I+ I REWGL+LMDEVHVVPA FR+ ++ TKSHCKLGLTATL+RED+ I DL F+I
Sbjct: 351 KIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLI 410
Query: 1096 GPKLYEANWQDLVQAGYLAKVTCFE 1170
GPKLYEANW DLV+ G++A V C E
Sbjct: 411 GPKLYEANWLDLVKGGFIANVQCAE 435
>ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
Length = 769
Score = 368 bits (944), Expect = 3e-99
Identities = 201/425 (47%), Positives = 261/425 (61%), Gaps = 38/425 (8%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D+ RPLW + I LET S YK AYDF IAIAEP R E+ HEY +T SLY
Sbjct: 56 ELKPDHTNRPLWACGNGRIFLETFSPLYKHAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 115
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ + ++ L+ LSKT +P + +FI + T N + IE P +
Sbjct: 116 AVSVGLETETVINVLNKLSKTKLPKEMIKFIHDSTANYGKVKLVLKKNRYFIESPFPEVL 175
Query: 376 -----DRVYSRISHAVLEKK------------QISNTHAVL------------------E 450
D SR S + E +I TH L E
Sbjct: 176 KTLLRDETISR-SRLISENVNGDGFTISKAAGEIEGTHDELLNEAEVAAVAEEKEAHSFE 234
Query: 451 MNPSKVVEARATC--RTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFV 624
++PS+V + C +NYP++EEYD++NDT P LD++L +AQ RPYQ KS+ KMF
Sbjct: 235 IDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFG 294
Query: 625 NGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKV 804
NG+ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWAFQF+ W+ + ++
Sbjct: 295 NGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQI 354
Query: 805 QSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVP 984
TSD+K + F A ++VTTY+M + G+RS++SE I+ I REWGL+LMDEVHVVP
Sbjct: 355 CRFTSDSKER-FRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 413
Query: 985 AKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTC 1164
A FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ G++A V C
Sbjct: 414 AHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 473
Query: 1165 FEVLC 1179
EV C
Sbjct: 474 AEVWC 478
>ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
Length = 769
Score = 367 bits (943), Expect = 4e-99
Identities = 201/425 (47%), Positives = 261/425 (61%), Gaps = 38/425 (8%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D+ RPLW + I LET S YK AYDF IAIAEP R E+ HEY +T SLY
Sbjct: 56 ELKPDHPNRPLWACGNGRIFLETFSPLYKHAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 115
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ + ++ L+ LSKT +P + +FI + T N + IE P +
Sbjct: 116 AVSVGLETETVISVLNKLSKTKLPKEMVKFIHDSTANYGKVKLVLKKNRYFIESPFPEVL 175
Query: 376 -----DRVYSRISHAVLEKK------------QISNTHAVL------------------E 450
D SR S + E +I TH L E
Sbjct: 176 KTLLRDETISR-SRIISENVNGDGFTISKAAGEIEGTHDELLNEAEVAAVAEEKEAHSFE 234
Query: 451 MNPSKVVEARATC--RTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFV 624
++PS+V + C +NYP++EEYD++NDT P LD++L +AQ RPYQ KS+ KMF
Sbjct: 235 IDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFG 294
Query: 625 NGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKV 804
NG+ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWAFQF+ W+ + ++
Sbjct: 295 NGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQI 354
Query: 805 QSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVP 984
TSD+K + F A ++VTTY+M + G+RS++SE I+ I REWGL+LMDEVHVVP
Sbjct: 355 CRFTSDSKER-FRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVP 413
Query: 985 AKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTC 1164
A FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ G++A V C
Sbjct: 414 AHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQC 473
Query: 1165 FEVLC 1179
EV C
Sbjct: 474 AEVWC 478
>gb|EMJ11549.1| hypothetical protein PRUPE_ppa001762mg [Prunus persica]
Length = 768
Score = 367 bits (943), Expect = 4e-99
Identities = 198/428 (46%), Positives = 260/428 (60%), Gaps = 41/428 (9%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D+ RPLW D I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 53 ELKPDHINRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 112
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEGIPSAID 378
AVS G+ + I+ L+ LSKT +P + FI T N +++E
Sbjct: 113 AVSVGLETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYLVESPFPEAR 172
Query: 379 RVYSRISHAVLEKKQI---------------------------------------SNTHA 441
+ + + V+ K +I THA
Sbjct: 173 VLKTLLKDEVISKSRIISEGSRGSDGFTISKTMGEIGAGPSDLLNEAELAAAAEEKETHA 232
Query: 442 VLEMNPSKVVEARATC--RTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDK 615
E++P++V + C +NYP++EEYD++NDT P LD++L +AQ RPYQ KS+ K
Sbjct: 233 -FEVDPTQVENVKERCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSK 291
Query: 616 MFVNGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHA 795
MF NG+ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWAFQF+ W+ +
Sbjct: 292 MFGNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRD 351
Query: 796 SKVQSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVH 975
++ TSD+K + F A ++VTTY+M + G+RS++SE I+ I REWGL+LMDEVH
Sbjct: 352 EQICRFTSDSKER-FRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVH 410
Query: 976 VVPAKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAK 1155
VVPA+ FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ G++A
Sbjct: 411 VVPAQMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIAN 470
Query: 1156 VTCFEVLC 1179
V C EV C
Sbjct: 471 VQCAEVWC 478
>ref|XP_006285201.1| hypothetical protein CARUB_v10006557mg [Capsella rubella]
gi|482553906|gb|EOA18099.1| hypothetical protein
CARUB_v10006557mg [Capsella rubella]
Length = 821
Score = 367 bits (941), Expect = 7e-99
Identities = 196/406 (48%), Positives = 258/406 (63%), Gaps = 20/406 (4%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D+ RPLW D I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 153 ELKPDHLNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 212
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIE------- 357
AVS G+ + I+ L+ LSKT +P + FI T N + IE
Sbjct: 213 AVSVGLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEPY 272
Query: 358 --GIPSAIDRVYSRISHA---VLEKKQIS------NTHAVLEMNPSKVVEARATC--RTI 498
G I + + +L + +++ TH+ E++PS+V + C +
Sbjct: 273 YGGDEFTIGKTSGELEAGPGELLNEAELAAAAEEKETHS-FEIDPSQVENVKQRCLPNAL 331
Query: 499 NYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKS 678
NYP++EEYD++ND P LD++L AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKS
Sbjct: 332 NYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKS 391
Query: 679 LTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADI 858
L GV AA R+ K LC A +VSV+QWAFQF+ W+ + ++ TSD+K + F A +
Sbjct: 392 LVGVSAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKER-FRGNAGV 450
Query: 859 IVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLG 1038
+VTTY+M ++G+RS++SE I+ + REWGL+LMDEVHVVPA FR+ ++ TKSHCKLG
Sbjct: 451 VVTTYNMVAFSGKRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLG 510
Query: 1039 LTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVL 1176
LTATL+RED+ I DL F+IGPKLYEANW DLV+ G++A V C E L
Sbjct: 511 LTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEAL 556
>ref|XP_002978280.1| hypothetical protein SELMODRAFT_418040 [Selaginella moellendorffii]
gi|300154301|gb|EFJ20937.1| hypothetical protein
SELMODRAFT_418040 [Selaginella moellendorffii]
Length = 747
Score = 363 bits (931), Expect = 1e-97
Identities = 196/415 (47%), Positives = 261/415 (62%), Gaps = 28/415 (6%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D+ RRP+ + D I LET S YKQAYDF IA+AEP R E+ HEY +T SLY
Sbjct: 49 ELKSDHDRRPILVGCDGRIFLETFSPLYKQAYDFLIAVAEPVCRPEHMHEYNLTPHSLYA 108
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEGIPSAID 378
AVS G+ ++ L+ LSK +P ++ FI++ T N + IE I
Sbjct: 109 AVSFGLETSAVITVLERLSKAKLPSTVLDFIRKATLNCGKAKLVLQKNRYFIESPNEEIF 168
Query: 379 RVYSRISHAVLEKKQISNTHAV--------------------------LEMNPSKV--VE 474
+ + ++ V+ + +I NT + E++P +V V+
Sbjct: 169 KKF--LNDPVIARARIFNTTQISVVAESLPTDLESLTGEVAEERKVHSFEIDPDQVELVK 226
Query: 475 ARATCRTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIV 654
R ++YPL+EEYD++NDT P L I+L +AQ RPYQ KS+ KMF NG+ARSG+IV
Sbjct: 227 QRCLSPDLSYPLLEEYDFRNDTVNPELSIELKPQAQPRPYQEKSLSKMFGNGRARSGIIV 286
Query: 655 LPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSK 834
LPCGAGKSL GV AA R+ + LC A +VSV+QWAFQF+ W+ + ++ TSD+K K
Sbjct: 287 LPCGAGKSLVGVSAACRIRRSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKDK 346
Query: 835 DFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAK 1014
F A +IVTTY+M + G+RS++SE ++ I REWGL+LMDEVHVVPA FR+ ++
Sbjct: 347 -FKGNACVIVTTYNMVAFKGKRSEESEKVIELIRSREWGLLLMDEVHVVPAHMFRKVISI 405
Query: 1015 TKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLC 1179
TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ GY+A V C EV C
Sbjct: 406 TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKNGYIANVQCAEVWC 460
>dbj|BAB08508.1| DNA excision repair cross-complementing protein [Arabidopsis
thaliana]
Length = 754
Score = 361 bits (927), Expect = 3e-97
Identities = 198/425 (46%), Positives = 255/425 (60%), Gaps = 38/425 (8%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D+ RPLW D I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 44 ELKPDHGNRPLWACADGKIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 103
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ + I+ L+ LSKT +P I FI T N + IE P +
Sbjct: 104 AVSVGLETETIISVLNKLSKTKLPGEIIDFIHASTANYGKVKLVLKKNRYFIESPFPEVL 163
Query: 376 DRVYSR--ISHAVLEKK--------QISNTHAVLEMNPSKV------------------- 468
R+ S I+ A + I T LE P ++
Sbjct: 164 KRLLSDDVINRARFTSEPYYGGDGFTIGKTSGELEAGPGELLNEAELAAAAEEKETHSFE 223
Query: 469 --------VEARATCRTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFV 624
V+ R +NYP++EEYD++ND P LD++L AQ RPYQ KS+ KMF
Sbjct: 224 IDPALVENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFG 283
Query: 625 NGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKV 804
NG+ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWA+QF+ W+ + ++
Sbjct: 284 NGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAYQFKLWSTIKDDQI 343
Query: 805 QSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVP 984
TSD+K + F A ++VTTY+M + G+RS+++E I+ + REWGL+LMDEVHVVP
Sbjct: 344 CRFTSDSKER-FRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEMRNREWGLLLMDEVHVVP 402
Query: 985 AKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTC 1164
A FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ G++A V C
Sbjct: 403 AHMFRKVISITKSHCKLGLTATLVREDEKITDLNFLIGPKLYEANWLDLVKGGFIANVQC 462
Query: 1165 FEVLC 1179
EV C
Sbjct: 463 AEVWC 467
>ref|NP_568591.1| DNA repair helicase XPB2 [Arabidopsis thaliana]
gi|57013267|sp|Q9FUG4.1|XPB2_ARATH RecName: Full=DNA
repair helicase XPB2; AltName: Full=ERCC3 homolog 2;
AltName: Full=RAD25 homolog 2; Short=AtXPB2; AltName:
Full=XPB homolog 2 gi|11037022|gb|AAG27465.1|AF308595_1
putative DNA repair protein and transcription factor
[Arabidopsis thaliana] gi|47606402|gb|AAT36214.1|
putative DNA repair and transcription factor XBP2
[Arabidopsis thaliana] gi|332007286|gb|AED94669.1| DNA
repair helicase XPB2 [Arabidopsis thaliana]
Length = 766
Score = 361 bits (927), Expect = 3e-97
Identities = 198/425 (46%), Positives = 255/425 (60%), Gaps = 38/425 (8%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D+ RPLW D I LET S YKQAYDF IAIAEP R E+ HEY +T SLY
Sbjct: 56 ELKPDHGNRPLWACADGKIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYA 115
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEG-IPSAI 375
AVS G+ + I+ L+ LSKT +P I FI T N + IE P +
Sbjct: 116 AVSVGLETETIISVLNKLSKTKLPGEIIDFIHASTANYGKVKLVLKKNRYFIESPFPEVL 175
Query: 376 DRVYSR--ISHAVLEKK--------QISNTHAVLEMNPSKV------------------- 468
R+ S I+ A + I T LE P ++
Sbjct: 176 KRLLSDDVINRARFTSEPYYGGDGFTIGKTSGELEAGPGELLNEAELAAAAEEKETHSFE 235
Query: 469 --------VEARATCRTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFV 624
V+ R +NYP++EEYD++ND P LD++L AQ RPYQ KS+ KMF
Sbjct: 236 IDPALVENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFG 295
Query: 625 NGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKV 804
NG+ARSG+IVLPCGAGKSL GV AA R+ K LC A +VSV+QWA+QF+ W+ + ++
Sbjct: 296 NGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAYQFKLWSTIKDDQI 355
Query: 805 QSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVP 984
TSD+K + F A ++VTTY+M + G+RS+++E I+ + REWGL+LMDEVHVVP
Sbjct: 356 CRFTSDSKER-FRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEMRNREWGLLLMDEVHVVP 414
Query: 985 AKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTC 1164
A FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ G++A V C
Sbjct: 415 AHMFRKVISITKSHCKLGLTATLVREDEKITDLNFLIGPKLYEANWLDLVKGGFIANVQC 474
Query: 1165 FEVLC 1179
EV C
Sbjct: 475 AEVWC 479
>ref|XP_002966290.1| hypothetical protein SELMODRAFT_230853 [Selaginella moellendorffii]
gi|300165710|gb|EFJ32317.1| hypothetical protein
SELMODRAFT_230853 [Selaginella moellendorffii]
Length = 711
Score = 359 bits (922), Expect = 1e-96
Identities = 198/419 (47%), Positives = 261/419 (62%), Gaps = 32/419 (7%)
Frame = +1
Query: 19 ELKVDNARRPLWIIEDKTILLETSSEFYKQAYDFCIAIAEPESRLENFHEYKITAASLYG 198
ELK D+ RRP+ + D I LET S YKQAYDF IA+AEP R E+ HEY +T SLY
Sbjct: 18 ELKSDHDRRPILVGCDGRIFLETFSPLYKQAYDFLIAVAEPVCRPEHMHEYSLTPHSLYA 77
Query: 199 AVSAGMPPQDIVKYLDFLSKTHVPDSIRRFIKECTENVXXXXXXXXXXXFIIEGIPSAID 378
AVS G+ ++ L+ LSK +P ++ FI++ T N + IE S D
Sbjct: 78 AVSFGLETSAVITVLERLSKAKLPSTVLDFIRKATLNCGKAKLVLQKNRYFIE---SPND 134
Query: 379 RVYSRISHAVL----------EKKQISNTHAVL--------------------EMNPSKV 468
++ + + + K QIS + L E++P +V
Sbjct: 135 EIFKKFLNDPILGLYQNGSGNSKSQISVSAESLPTDLESLTGEVAEERKVHSFEIDPDQV 194
Query: 469 --VEARATCRTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARS 642
V+ R ++YPL+EEYD++NDT P L I+L +AQ RPYQ KS+ KMF NG+ARS
Sbjct: 195 ELVKQRCLSPDLSYPLLEEYDFRNDTVNPELSIELKPQAQPRPYQEKSLSKMFGNGRARS 254
Query: 643 GVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSD 822
G+IVLPCGAGKSL GV AA R+ + LC A +VSV+QWAFQF+ W+ + ++ TSD
Sbjct: 255 GIIVLPCGAGKSLVGVSAACRIRRSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSD 314
Query: 823 TKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFRE 1002
+K K F A +IVTTY+M + G+RS++SE ++ I REWGL+LMDEVHVVPA FR+
Sbjct: 315 SKDK-FKGNACVIVTTYNMVAFKGKRSEESEKVIELIRSREWGLLLMDEVHVVPAHMFRK 373
Query: 1003 AVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLC 1179
++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DLV+ GY+A V C EV C
Sbjct: 374 VISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKNGYIANVQCAEVWC 432