BLASTX nr result
ID: Ephedra25_contig00012583
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00012583
(669 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16107.1| unknown [Picea sitchensis] gi|224285605|gb|ACN405... 97 4e-18
gb|ABR17668.1| unknown [Picea sitchensis] 77 4e-12
gb|ABK24684.1| unknown [Picea sitchensis] 77 6e-12
ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831... 69 2e-09
ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831... 69 2e-09
gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea m... 68 3e-09
gb|ACR34605.1| unknown [Zea mays] gi|413926095|gb|AFW66027.1| hy... 68 3e-09
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu... 68 3e-09
gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea m... 68 3e-09
ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea ma... 68 3e-09
ref|XP_006852315.1| hypothetical protein AMTR_s00049p00200350 [A... 65 2e-08
ref|XP_004173895.1| PREDICTED: nuclear polyadenylated RNA-bindin... 65 2e-08
ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotei... 65 2e-08
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore... 65 2e-08
ref|XP_004966062.1| PREDICTED: heterogeneous nuclear ribonucleop... 64 3e-08
ref|XP_004951463.1| PREDICTED: heterogeneous nuclear ribonucleop... 64 3e-08
ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [S... 64 3e-08
gb|AFW86729.1| hypothetical protein ZEAMMB73_661369 [Zea mays] 64 4e-08
gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays] 64 4e-08
ref|NP_001141380.1| hypothetical protein [Zea mays] gi|194704250... 64 4e-08
>gb|ABR16107.1| unknown [Picea sitchensis] gi|224285605|gb|ACN40521.1| unknown
[Picea sitchensis] gi|224285970|gb|ACN40697.1| unknown
[Picea sitchensis]
Length = 371
Score = 97.1 bits (240), Expect = 4e-18
Identities = 52/101 (51%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKT-SDSESPFVMDTRKPFLPXXXXXXX 179
TF+SE++VE ILS G+M ELGGKQVEIKKAEPKK + E + MD R PF+P
Sbjct: 186 TFDSEEAVEEILSHGKMCELGGKQVEIKKAEPKKALPEPEPAYGMDGRPPFIP---GARG 242
Query: 180 XXXXXXXXXADAYGNSYRPGPYGARQGTFGPYGGAEFGSSH 302
A Y +SYR GPYG R G +G YGGA++GS++
Sbjct: 243 YGDAYGGVGAGDYNSSYRAGPYGGRAGDYGGYGGADYGSAY 283
>gb|ABR17668.1| unknown [Picea sitchensis]
Length = 411
Score = 77.4 bits (189), Expect = 4e-12
Identities = 47/103 (45%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSESP-FVMDTRKPFLPXXXXXXX 179
TFE+E +VE I+S+GRM ELGGKQVEIKKAEPKK P + +D+R P++P
Sbjct: 176 TFETEQAVEEIISQGRMLELGGKQVEIKKAEPKKPLPDAGPIYGVDSRPPYIP--GGVGG 233
Query: 180 XXXXXXXXXADAYG-NSYR-PGPYGARQGTFGPYGGAEFGSSH 302
YG N YR G YG R G F YGG ++G +
Sbjct: 234 FGDSYNGFGGAGYGSNPYRSAGGYGDRPGGFAGYGGPDYGRGY 276
>gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 76.6 bits (187), Expect = 6e-12
Identities = 47/103 (45%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSESP-FVMDTRKPFLPXXXXXXX 179
TF+SE VE I+S+G+M ELGGKQVEIKKAEPKK S P +D R P++P
Sbjct: 180 TFDSEQVVEEIISQGKMIELGGKQVEIKKAEPKKPSSDAGPVHGIDNRPPYIP--GGVGG 237
Query: 180 XXXXXXXXXADAYG-NSYR-PGPYGARQGTFGPYGGAEFGSSH 302
YG N YR G YG R G + YGG E+G +
Sbjct: 238 FRDSYSGFEGAGYGSNPYRSAGGYGGRPGGYAGYGGPEYGRGY 280
>ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831046 isoform 2
[Brachypodium distachyon]
Length = 383
Score = 68.6 bits (166), Expect = 2e-09
Identities = 40/100 (40%), Positives = 47/100 (47%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSESPFVMDTRKPFLPXXXXXXXX 182
TFESEDSVE ++S+GRM +LGGKQVEIKKAEPKK S
Sbjct: 181 TFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGGDHS-------------------- 220
Query: 183 XXXXXXXXADAYGNSYRPGPYGARQGTFGPYGGAEFGSSH 302
Y +SYR G G + G GG +G H
Sbjct: 221 SNGRSSHAGGGYRSSYRSGASGGGSSSGGSVGGGSYGGGH 260
>ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831046 isoform 1
[Brachypodium distachyon]
Length = 403
Score = 68.6 bits (166), Expect = 2e-09
Identities = 40/100 (40%), Positives = 47/100 (47%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSESPFVMDTRKPFLPXXXXXXXX 182
TFESEDSVE ++S+GRM +LGGKQVEIKKAEPKK S
Sbjct: 201 TFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGGDHS-------------------- 240
Query: 183 XXXXXXXXADAYGNSYRPGPYGARQGTFGPYGGAEFGSSH 302
Y +SYR G G + G GG +G H
Sbjct: 241 SNGRSSHAGGGYRSSYRSGASGGGSSSGGSVGGGSYGGGH 280
>gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 443
Score = 67.8 bits (164), Expect = 3e-09
Identities = 43/100 (43%), Positives = 51/100 (51%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSESPFVMDTRKPFLPXXXXXXXX 182
TFESEDSVE ++S+GRM +LGGKQVEIKKAEPKK S
Sbjct: 250 TFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGSDHS-------------------- 289
Query: 183 XXXXXXXXADAYGNSYRPGPYGARQGTFGPYGGAEFGSSH 302
AY NSYR G GA G+ G GG +G ++
Sbjct: 290 SNGRSNHGGGAYRNSYRSGG-GAGSGSSGGGGGYGYGGAY 328
>gb|ACR34605.1| unknown [Zea mays] gi|413926095|gb|AFW66027.1| hypothetical protein
ZEAMMB73_185087 [Zea mays]
Length = 366
Score = 67.8 bits (164), Expect = 3e-09
Identities = 43/100 (43%), Positives = 51/100 (51%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSESPFVMDTRKPFLPXXXXXXXX 182
TFESEDSVE ++S+GRM +LGGKQVEIKKAEPKK S
Sbjct: 173 TFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGSDHS-------------------- 212
Query: 183 XXXXXXXXADAYGNSYRPGPYGARQGTFGPYGGAEFGSSH 302
AY NSYR G GA G+ G GG +G ++
Sbjct: 213 SNGRSNHGGGAYRNSYRSGG-GAGSGSSGGGGGYGYGGAY 251
>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative
[Ricinus communis]
Length = 2256
Score = 67.8 bits (164), Expect = 3e-09
Identities = 42/100 (42%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSD--SESPFVMDTRKPFLPXXXXXX 176
TF++E +V+ +L+KG EL G QVEIKKAEPKK + S D+R P
Sbjct: 2062 TFDTEQAVDDLLAKGNKLELAGGQVEIKKAEPKKPNPPLPSSKRYNDSR----PGFGDAY 2117
Query: 177 XXXXXXXXXXADAYGNSYRP-GPYGARQGTFGPYGGAEFG 293
G +YR GPYG+R GT+G YGG EFG
Sbjct: 2118 DGFGGSGFGGGGGGGGAYRSGGPYGSRSGTYGGYGGGEFG 2157
>gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 67.8 bits (164), Expect = 3e-09
Identities = 43/100 (43%), Positives = 51/100 (51%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSESPFVMDTRKPFLPXXXXXXXX 182
TFESEDSVE ++S+GRM +LGGKQVEIKKAEPKK S
Sbjct: 191 TFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGSDHS-------------------- 230
Query: 183 XXXXXXXXADAYGNSYRPGPYGARQGTFGPYGGAEFGSSH 302
AY NSYR G GA G+ G GG +G ++
Sbjct: 231 SNGRSNHGGGAYRNSYRSGG-GAGSGSSGGGGGYGYGGAY 269
>ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear
ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear
ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear
ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 67.8 bits (164), Expect = 3e-09
Identities = 43/100 (43%), Positives = 51/100 (51%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSESPFVMDTRKPFLPXXXXXXXX 182
TFESEDSVE ++S+GRM +LGGKQVEIKKAEPKK S
Sbjct: 191 TFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGSDHS-------------------- 230
Query: 183 XXXXXXXXADAYGNSYRPGPYGARQGTFGPYGGAEFGSSH 302
AY NSYR G GA G+ G GG +G ++
Sbjct: 231 SNGRSNHGGGAYRNSYRSGG-GAGSGSSGGGGGYGYGGAY 269
>ref|XP_006852315.1| hypothetical protein AMTR_s00049p00200350 [Amborella trichopoda]
gi|548855919|gb|ERN13782.1| hypothetical protein
AMTR_s00049p00200350 [Amborella trichopoda]
Length = 366
Score = 65.1 bits (157), Expect = 2e-08
Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSESPFVMDTRKPFLPXXXXXXXX 182
TFE+E +V+ +L KG EL G QVEIKKAEPKK + + ++R P
Sbjct: 171 TFETEQAVDDLLVKGNRIELAGAQVEIKKAEPKKPNPPPPKYGHESRPPI---------- 220
Query: 183 XXXXXXXXADAYG---------NSYRP-GPYGARQGTFGPYGGAEFGSSH 302
D YG +SYR G +G+R G +G YGG++FGS +
Sbjct: 221 -----GGFGDVYGGYGGGGFGASSYRSGGGFGSRPGGYGGYGGSDFGSGY 265
>ref|XP_004173895.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like,
partial [Cucumis sativus]
Length = 270
Score = 64.7 bits (156), Expect = 2e-08
Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSESPF--VMDTRKPFLPXXXXXX 176
TFE+E +V+ +L+ G E+ G QVEIKKAEPKK + +P D+R +
Sbjct: 141 TFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSY------SG 194
Query: 177 XXXXXXXXXXADAYGNSYRP-GPYGARQGTFGPYGGAEF 290
YG S+R GPYGAR G +G YGG +F
Sbjct: 195 AYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDF 233
>ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
sativus]
Length = 1758
Score = 64.7 bits (156), Expect = 2e-08
Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSESPF--VMDTRKPFLPXXXXXX 176
TFE+E +V+ +L+ G E+ G QVEIKKAEPKK + +P D+R +
Sbjct: 1556 TFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSY------SG 1609
Query: 177 XXXXXXXXXXADAYGNSYRP-GPYGARQGTFGPYGGAEF 290
YG S+R GPYGAR G +G YGG +F
Sbjct: 1610 AYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDF 1648
>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
210-like [Cucumis sativus]
Length = 2257
Score = 64.7 bits (156), Expect = 2e-08
Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSESPF--VMDTRKPFLPXXXXXX 176
TFE+E +V+ +L+ G E+ G QVEIKKAEPKK + +P D+R +
Sbjct: 2056 TFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSY------SG 2109
Query: 177 XXXXXXXXXXADAYGNSYRP-GPYGARQGTFGPYGGAEF 290
YG S+R GPYGAR G +G YGG +F
Sbjct: 2110 AYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDF 2148
>ref|XP_004966062.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Setaria italica]
Length = 423
Score = 64.3 bits (155), Expect = 3e-08
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSES 122
TFESED+VE ++S+GRMH+LGGKQVEIKKAEPKK +S
Sbjct: 236 TFESEDAVERVMSQGRMHDLGGKQVEIKKAEPKKPGGGDS 275
>ref|XP_004951463.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Setaria
italica]
Length = 393
Score = 64.3 bits (155), Expect = 3e-08
Identities = 42/97 (43%), Positives = 47/97 (48%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSESPFVMDTRKPFLPXXXXXXXX 182
TFESEDSVE ++S+GRM +LGGKQVEIKKAEPKK S
Sbjct: 192 TFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGSDHS-------------------- 231
Query: 183 XXXXXXXXADAYGNSYRPGPYGARQGTFGPYGGAEFG 293
Y NSYR G GA G+ G GG G
Sbjct: 232 SNGRSSHGGGGYRNSYRSG--GAGSGSGGSGGGGAGG 266
>ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
gi|241915398|gb|EER88542.1| hypothetical protein
SORBIDRAFT_10g022380 [Sorghum bicolor]
Length = 414
Score = 64.3 bits (155), Expect = 3e-08
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSES 122
TFESED+VE ++S+GRMH+LGGKQVEIKKAEPKK +S
Sbjct: 235 TFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGGGDS 274
>gb|AFW86729.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 270
Score = 63.9 bits (154), Expect = 4e-08
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSES 122
TFESED+VE ++S+GRMH+LGGKQVEIKKAEPKK +S
Sbjct: 97 TFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGAGDS 136
>gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 401
Score = 63.9 bits (154), Expect = 4e-08
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSES 122
TFESED+VE ++S+GRMH+LGGKQVEIKKAEPKK +S
Sbjct: 228 TFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGAGDS 267
>ref|NP_001141380.1| hypothetical protein [Zea mays] gi|194704250|gb|ACF86209.1| unknown
[Zea mays] gi|413954079|gb|AFW86728.1| hypothetical
protein ZEAMMB73_661369 [Zea mays]
Length = 345
Score = 63.9 bits (154), Expect = 4e-08
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3
Query: 3 TFESEDSVETILSKGRMHELGGKQVEIKKAEPKKTSDSES 122
TFESED+VE ++S+GRMH+LGGKQVEIKKAEPKK +S
Sbjct: 172 TFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGAGDS 211