BLASTX nr result
ID: Ephedra25_contig00012525
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00012525
(423 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002312048.2| hypothetical protein POPTR_0008s04510g [Popu... 84 2e-14
ref|XP_004237528.1| PREDICTED: regulator of nonsense transcripts... 84 2e-14
gb|ABP01543.1| UPF2, partial [Nicotiana attenuata] 84 2e-14
ref|XP_006340545.1| PREDICTED: regulator of nonsense transcripts... 83 3e-14
ref|XP_002523924.1| Regulator of nonsense transcripts, putative ... 83 3e-14
gb|EOY18506.1| Regulator of nonsense transcripts 2 isoform 3 [Th... 82 7e-14
gb|EOY18504.1| Regulator of nonsense transcripts 2 isoform 1 [Th... 82 7e-14
ref|XP_003546565.1| PREDICTED: regulator of nonsense transcripts... 82 7e-14
ref|XP_004488277.1| PREDICTED: regulator of nonsense transcripts... 82 1e-13
ref|XP_004488276.1| PREDICTED: regulator of nonsense transcripts... 82 1e-13
ref|XP_004296960.1| PREDICTED: regulator of nonsense transcripts... 82 1e-13
gb|ESW10518.1| hypothetical protein PHAVU_009G216500g [Phaseolus... 81 1e-13
ref|XP_003595517.1| Pentatricopeptide repeat-containing protein ... 81 2e-13
gb|ABD32424.2| Initiation factor eIF-4 gamma, middle; Up-framesh... 81 2e-13
gb|EXB30382.1| Regulator of nonsense transcripts 2 [Morus notabi... 80 2e-13
ref|XP_004169074.1| PREDICTED: LOW QUALITY PROTEIN: regulator of... 80 2e-13
ref|XP_004143811.1| PREDICTED: regulator of nonsense transcripts... 80 3e-13
ref|XP_003533845.1| PREDICTED: regulator of nonsense transcripts... 80 3e-13
ref|XP_002315268.1| hypothetical protein POPTR_0010s22310g [Popu... 80 3e-13
ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts... 80 4e-13
>ref|XP_002312048.2| hypothetical protein POPTR_0008s04510g [Populus trichocarpa]
gi|550332418|gb|EEE89415.2| hypothetical protein
POPTR_0008s04510g [Populus trichocarpa]
Length = 1171
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/77 (57%), Positives = 52/77 (67%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVTS + S A KD S E+LWDD+DT+ FYE L DLRAFVP VLL
Sbjct: 319 QPPVMPEDGHTTRVTSGEDASSPAAGKDTSLLEALWDDEDTRAFYECLPDLRAFVPAVLL 378
Query: 182 REPEPKATEKANKVFQQ 232
E EPKA E + K Q
Sbjct: 379 GEAEPKANEHSAKTQDQ 395
>ref|XP_004237528.1| PREDICTED: regulator of nonsense transcripts 2-like [Solanum
lycopersicum]
Length = 1188
Score = 84.0 bits (206), Expect = 2e-14
Identities = 42/74 (56%), Positives = 54/74 (72%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVTS + S +KD+S+ E+LWDD+DT+ FYE L DLRAFVP VLL
Sbjct: 319 QPPVMPEDGHTTRVTSGEDASSPGGSKDSSSLEALWDDEDTRAFYECLPDLRAFVPAVLL 378
Query: 182 REPEPKATEKANKV 223
E EPK +E+ KV
Sbjct: 379 GEAEPKLSEQLAKV 392
>gb|ABP01543.1| UPF2, partial [Nicotiana attenuata]
Length = 369
Score = 84.0 bits (206), Expect = 2e-14
Identities = 42/73 (57%), Positives = 54/73 (73%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVTS + S A+KD+S E+LWDD+DT+ FYE L DLRAFVP VLL
Sbjct: 198 QPPVMPEDGHTTRVTSGDDASSPGASKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLL 257
Query: 182 REPEPKATEKANK 220
E EPK++E+ K
Sbjct: 258 GEAEPKSSEQPLK 270
>ref|XP_006340545.1| PREDICTED: regulator of nonsense transcripts UPF2-like isoform X1
[Solanum tuberosum] gi|565347048|ref|XP_006340546.1|
PREDICTED: regulator of nonsense transcripts UPF2-like
isoform X2 [Solanum tuberosum]
gi|565347050|ref|XP_006340547.1| PREDICTED: regulator of
nonsense transcripts UPF2-like isoform X3 [Solanum
tuberosum]
Length = 1197
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/95 (46%), Positives = 62/95 (65%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVTS + S +KD+S E+LWDD+DT+ FYE L DLRAFVP VLL
Sbjct: 319 QPPVMPEDGHTTRVTSGEDASSPGGSKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLL 378
Query: 182 REPEPKATEKANKVFQQWHRKSVPWPPNSESSTTS 286
E EPK +E+A + S+ P+++ + T+
Sbjct: 379 GEAEPKLSEQA-----KGQEHSIDSTPDADETQTA 408
>ref|XP_002523924.1| Regulator of nonsense transcripts, putative [Ricinus communis]
gi|223536854|gb|EEF38493.1| Regulator of nonsense
transcripts, putative [Ricinus communis]
Length = 824
Score = 83.2 bits (204), Expect = 3e-14
Identities = 46/92 (50%), Positives = 59/92 (64%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVT+ + S KD+S E+LWDD+DT+ FYE L DLRAFVP VLL
Sbjct: 319 QPPVMPEDGHTTRVTTGEDASSPATGKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLL 378
Query: 182 REPEPKATEKANKVFQQWHRKSVPWPPNSESS 277
E EPK E++ K +Q S P +ESS
Sbjct: 379 GEAEPKVNEQSVKTQEQ---PSQPTQDTAESS 407
>gb|EOY18506.1| Regulator of nonsense transcripts 2 isoform 3 [Theobroma cacao]
gi|508726610|gb|EOY18507.1| Regulator of nonsense
transcripts 2 isoform 3 [Theobroma cacao]
Length = 1046
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/77 (53%), Positives = 54/77 (70%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
Q PVM ++S+T RVT+ + S K++ST E++WDDDDT+ FYE L DLRAFVP VLL
Sbjct: 172 QSPVMPEDSHTTRVTTGEDASSPATGKESSTLEAIWDDDDTRAFYECLPDLRAFVPAVLL 231
Query: 182 REPEPKATEKANKVFQQ 232
E EPK E+ +K +Q
Sbjct: 232 GEAEPKGIEQTSKAQEQ 248
>gb|EOY18504.1| Regulator of nonsense transcripts 2 isoform 1 [Theobroma cacao]
gi|508726608|gb|EOY18505.1| Regulator of nonsense
transcripts 2 isoform 1 [Theobroma cacao]
Length = 1193
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/77 (53%), Positives = 54/77 (70%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
Q PVM ++S+T RVT+ + S K++ST E++WDDDDT+ FYE L DLRAFVP VLL
Sbjct: 319 QSPVMPEDSHTTRVTTGEDASSPATGKESSTLEAIWDDDDTRAFYECLPDLRAFVPAVLL 378
Query: 182 REPEPKATEKANKVFQQ 232
E EPK E+ +K +Q
Sbjct: 379 GEAEPKGIEQTSKAQEQ 395
>ref|XP_003546565.1| PREDICTED: regulator of nonsense transcripts UPF2-like [Glycine
max]
Length = 1187
Score = 82.0 bits (201), Expect = 7e-14
Identities = 40/73 (54%), Positives = 54/73 (73%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVTS +G + + KD+S E +WDD+DT+ FYE L DLRAFVP VLL
Sbjct: 313 QPPVMPEDGHTTRVTSGEDGVSSASGKDSSVVEPIWDDEDTRTFYECLPDLRAFVPAVLL 372
Query: 182 REPEPKATEKANK 220
E EPK++E++ K
Sbjct: 373 GETEPKSSEQSAK 385
>ref|XP_004488277.1| PREDICTED: regulator of nonsense transcripts UPF2-like isoform X2
[Cicer arietinum]
Length = 1198
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/73 (56%), Positives = 51/73 (69%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVTS E + A KD+S E +WDD+DT+ FYE L DLRAFVP VLL
Sbjct: 325 QPPVMPEDGHTTRVTSGEEAISSTAGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLL 384
Query: 182 REPEPKATEKANK 220
E EPK E++ K
Sbjct: 385 GETEPKVNEQSVK 397
>ref|XP_004488276.1| PREDICTED: regulator of nonsense transcripts UPF2-like isoform X1
[Cicer arietinum]
Length = 1199
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/73 (56%), Positives = 51/73 (69%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVTS E + A KD+S E +WDD+DT+ FYE L DLRAFVP VLL
Sbjct: 326 QPPVMPEDGHTTRVTSGEEAISSTAGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLL 385
Query: 182 REPEPKATEKANK 220
E EPK E++ K
Sbjct: 386 GETEPKVNEQSVK 398
>ref|XP_004296960.1| PREDICTED: regulator of nonsense transcripts 2-like [Fragaria vesca
subsp. vesca]
Length = 1197
Score = 81.6 bits (200), Expect = 1e-13
Identities = 45/91 (49%), Positives = 58/91 (63%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVTS + S A KD+S E++WDD+DT+ FYE L DLRAFVP VLL
Sbjct: 329 QPPVMPEDGHTTRVTSGEDASSPAAGKDSSALEAIWDDEDTRAFYECLPDLRAFVPAVLL 388
Query: 182 REPEPKATEKANKVFQQWHRKSVPWPPNSES 274
E E K E++ K +Q P P +ES
Sbjct: 389 GEAESKVNEQSAKTQEQ------PTEPAAES 413
>gb|ESW10518.1| hypothetical protein PHAVU_009G216500g [Phaseolus vulgaris]
Length = 1195
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/73 (54%), Positives = 54/73 (73%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVTS EG + + KD+S E +WDD+DT+ FYE L DLRAFVP VLL
Sbjct: 313 QPPVMPEDGHTTRVTSGEEGISSASGKDSSVVEPIWDDEDTRTFYECLPDLRAFVPAVLL 372
Query: 182 REPEPKATEKANK 220
E E K++E+++K
Sbjct: 373 GETEQKSSEQSSK 385
>ref|XP_003595517.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484565|gb|AES65768.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1705
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/73 (56%), Positives = 51/73 (69%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVTS E + A KD+S E +WDD+DT+ FYE L DLRAFVP VLL
Sbjct: 319 QPPVMPEDGHTTRVTSGEEAVSSAAGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLL 378
Query: 182 REPEPKATEKANK 220
E EPK E++ K
Sbjct: 379 GETEPKVNEQSVK 391
>gb|ABD32424.2| Initiation factor eIF-4 gamma, middle; Up-frameshift suppressor 2
[Medicago truncatula]
Length = 1212
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/73 (56%), Positives = 51/73 (69%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVTS E + A KD+S E +WDD+DT+ FYE L DLRAFVP VLL
Sbjct: 319 QPPVMPEDGHTTRVTSGEEAVSSAAGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLL 378
Query: 182 REPEPKATEKANK 220
E EPK E++ K
Sbjct: 379 GETEPKVNEQSVK 391
>gb|EXB30382.1| Regulator of nonsense transcripts 2 [Morus notabilis]
Length = 1191
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/77 (54%), Positives = 53/77 (68%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVTS + S A KD+S E+LWDD+DT+ FYE L DLRAFVP VLL
Sbjct: 320 QPPVMPEDGHTTRVTSGEDTSSTAAGKDSSVVEALWDDEDTRAFYECLPDLRAFVPAVLL 379
Query: 182 REPEPKATEKANKVFQQ 232
E E K E++ K +Q
Sbjct: 380 GETESKLNEQSVKTQEQ 396
>ref|XP_004169074.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
2-like, partial [Cucumis sativus]
Length = 1144
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RV++ + S A KD+S E++WDD+DT+ FYE L DLRAFVP VLL
Sbjct: 267 QPPVMPEDGHTTRVSAXEDVSSPAAGKDSSVIEAIWDDEDTRAFYECLPDLRAFVPAVLL 326
Query: 182 REPEPKATEKANK 220
E EPKA E++ K
Sbjct: 327 GEAEPKANEQSAK 339
>ref|XP_004143811.1| PREDICTED: regulator of nonsense transcripts 2-like [Cucumis
sativus]
Length = 1195
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RV++ + S A KD+S E++WDD+DT+ FYE L DLRAFVP VLL
Sbjct: 318 QPPVMPEDGHTTRVSAGEDVSSPAAGKDSSVIEAIWDDEDTRAFYECLPDLRAFVPAVLL 377
Query: 182 REPEPKATEKANK 220
E EPKA E++ K
Sbjct: 378 GEAEPKANEQSAK 390
>ref|XP_003533845.1| PREDICTED: regulator of nonsense transcripts UPF2 [Glycine max]
Length = 1188
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/73 (53%), Positives = 53/73 (72%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVTS +G + + KD+S E +WDD+D + FYE L DLRAFVP VLL
Sbjct: 313 QPPVMPEDGHTTRVTSGEDGISSASGKDSSVVEPIWDDEDARTFYECLPDLRAFVPAVLL 372
Query: 182 REPEPKATEKANK 220
E EPK++E++ K
Sbjct: 373 GETEPKSSEQSAK 385
>ref|XP_002315268.1| hypothetical protein POPTR_0010s22310g [Populus trichocarpa]
gi|222864308|gb|EEF01439.1| hypothetical protein
POPTR_0010s22310g [Populus trichocarpa]
Length = 1194
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/77 (54%), Positives = 53/77 (68%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T R+TS + S A KD+S E+LWDD+DT+ FYE L DLRAFVP VLL
Sbjct: 319 QPPVMPEDGHTTRLTSGEDISSPAAGKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLL 378
Query: 182 REPEPKATEKANKVFQQ 232
E EPKA + + K Q
Sbjct: 379 GEVEPKANDHSVKTQDQ 395
>ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts 2-like [Vitis
vinifera]
Length = 1222
Score = 79.7 bits (195), Expect = 4e-13
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = +2
Query: 2 QPPVMLKNSNTKRVTST*EGSQANAAKDASTSESLWDDDDTKFFYEGLLDLRAFVPTVLL 181
QPPVM ++ +T RVTS E + AAK++S E++WDD+DT+ FYE L DLRAFVP VLL
Sbjct: 348 QPPVMPEDGHTTRVTSG-EDVSSPAAKESSALEAVWDDEDTRAFYECLPDLRAFVPAVLL 406
Query: 182 REPEPKATEKANKVFQQ 232
E EPK E++ K +Q
Sbjct: 407 GEAEPKVNEQSAKTQEQ 423