BLASTX nr result
ID: Ephedra25_contig00012501
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00012501
(515 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS69584.1| hypothetical protein M569_05182, partial [Genlise... 74 2e-11
ref|XP_006847349.1| hypothetical protein AMTR_s00015p00252960 [A... 72 6e-11
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,... 72 1e-10
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ... 71 1e-10
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis] 71 2e-10
gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508... 71 2e-10
gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe... 71 2e-10
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro... 70 2e-10
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci... 70 2e-10
ref|XP_002333134.1| predicted protein [Populus trichocarpa] 70 2e-10
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,... 70 3e-10
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,... 70 3e-10
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [... 70 3e-10
ref|NP_197800.1| RNA polymerase sigma factor 5 [Arabidopsis thal... 70 4e-10
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,... 70 4e-10
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,... 70 4e-10
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,... 70 4e-10
ref|XP_002874170.1| hypothetical protein ARALYDRAFT_489269 [Arab... 70 4e-10
gb|ESW33340.1| hypothetical protein PHAVU_001G061400g [Phaseolus... 69 5e-10
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr... 69 5e-10
>gb|EPS69584.1| hypothetical protein M569_05182, partial [Genlisea aurea]
Length = 488
Score = 74.3 bits (181), Expect = 2e-11
Identities = 34/66 (51%), Positives = 50/66 (75%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+EG +I++RYG +GK +++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 419 IDDVLDSLKPKEGLVIRQRYGLDGKGDRTLGEVAGNLNISREMVRKHEVKALMKLKHPAR 478
Query: 221 IDFLKQ 238
+D+L++
Sbjct: 479 VDYLRR 484
>ref|XP_006847349.1| hypothetical protein AMTR_s00015p00252960 [Amborella trichopoda]
gi|548850426|gb|ERN08930.1| hypothetical protein
AMTR_s00015p00252960 [Amborella trichopoda]
Length = 128
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/78 (44%), Positives = 53/78 (67%)
Frame = +2
Query: 5 DPMDPRLEVKHFVDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEE 184
D P ++ +DD+L SL P+E +I++RYG +GK +++L E A L IS EMVRK E
Sbjct: 48 DKRKPAALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLSEIAGNLNISREMVRKHE 107
Query: 185 NKAFSKLRDPSRIDFLKQ 238
KA KL+ P+R+D+L++
Sbjct: 108 VKALMKLKHPARVDYLRR 125
>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 520
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/66 (50%), Positives = 49/66 (74%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E +I++RYG +GK +++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 452 IDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR 511
Query: 221 IDFLKQ 238
+D+L++
Sbjct: 512 VDYLRR 517
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|302143685|emb|CBI22546.3| unnamed protein product
[Vitis vinifera]
Length = 518
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/66 (50%), Positives = 49/66 (74%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E ++++RYG +GK +++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 450 LDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEVKALMKLKHPAR 509
Query: 221 IDFLKQ 238
+D+L+Q
Sbjct: 510 VDYLRQ 515
>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 517
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/66 (50%), Positives = 49/66 (74%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E +I++RYG +GK +++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 449 LDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR 508
Query: 221 IDFLKQ 238
+D+L++
Sbjct: 509 VDYLRR 514
>gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao]
gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
[Theobroma cacao]
Length = 516
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/66 (50%), Positives = 49/66 (74%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E +I++RYG +GK +++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 448 LDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR 507
Query: 221 IDFLKQ 238
+D+L++
Sbjct: 508 VDYLRR 513
>gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
Length = 519
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/66 (50%), Positives = 49/66 (74%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E +I++RYG +GK +++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 451 LDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR 510
Query: 221 IDFLKQ 238
+D+L++
Sbjct: 511 VDYLRR 516
>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
sigma subunit SigE family protein [Populus trichocarpa]
Length = 512
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/66 (48%), Positives = 49/66 (74%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E ++++RYG +GK +++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 444 LDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTR 503
Query: 221 IDFLKQ 238
+D+L++
Sbjct: 504 VDYLRR 509
>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
[Glycine max]
Length = 512
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/66 (50%), Positives = 49/66 (74%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E +I++RYG +GK +++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 444 LDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR 503
Query: 221 IDFLKQ 238
+D+L++
Sbjct: 504 LDYLRR 509
>ref|XP_002333134.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/66 (48%), Positives = 49/66 (74%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E ++++RYG +GK +++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 444 LDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTR 503
Query: 221 IDFLKQ 238
+D+L++
Sbjct: 504 VDYLRR 509
>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 515
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/66 (50%), Positives = 48/66 (72%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E +I++RYG +GK ++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 447 LDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR 506
Query: 221 IDFLKQ 238
+D+L++
Sbjct: 507 VDYLRR 512
>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 514
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/66 (50%), Positives = 48/66 (72%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E +I++RYG +GK ++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 446 LDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR 505
Query: 221 IDFLKQ 238
+D+L++
Sbjct: 506 VDYLRR 511
>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 501
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/66 (50%), Positives = 49/66 (74%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E +I++RYG +GK +++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 433 LDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHPAR 492
Query: 221 IDFLKQ 238
+D+L++
Sbjct: 493 VDYLRR 498
>ref|NP_197800.1| RNA polymerase sigma factor 5 [Arabidopsis thaliana]
gi|75267675|sp|Q9ZNX9.1|SIGE_ARATH RecName: Full=RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial; Short=Sigma factor E;
Short=Sigma-E; AltName: Full=RNA polymerase sigma factor
sig5; Short=Atsig5; Short=Sigma factor 5; Flags:
Precursor gi|4033838|emb|CAA77213.1| sigma-like factor
[Arabidopsis thaliana] gi|4972299|dbj|BAA78109.1| RNA
polymerase sigma subunit SigE [Arabidopsis thaliana]
gi|10178160|dbj|BAB11572.1| sigma-like factor
[Arabidopsis thaliana] gi|222423237|dbj|BAH19595.1|
AT5G24120 [Arabidopsis thaliana]
gi|332005876|gb|AED93259.1| RNA polymerase sigma factor
5 [Arabidopsis thaliana]
Length = 517
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = +2
Query: 2 NDPMDPRLEVKHFVDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKE 181
N+ P L ++ +DD+L SL P+E +I++RYG +GK +++L E A L IS EMVRK
Sbjct: 437 NNSRQPAL-LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 495
Query: 182 ENKAFSKLRDPSRIDFLKQ 238
E KA KL+ +R+D+L+Q
Sbjct: 496 EVKALMKLKHQARVDYLRQ 514
>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Solanum tuberosum]
Length = 516
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/66 (48%), Positives = 49/66 (74%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E +I++RYG +GK +++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 448 LDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTR 507
Query: 221 IDFLKQ 238
+D++++
Sbjct: 508 VDYVRR 513
>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform 2 [Solanum
lycopersicum]
Length = 487
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/66 (48%), Positives = 49/66 (74%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E +I++RYG +GK +++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 419 LDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTR 478
Query: 221 IDFLKQ 238
+D++++
Sbjct: 479 VDYVRR 484
>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform 1 [Solanum
lycopersicum]
Length = 516
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/66 (48%), Positives = 49/66 (74%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E +I++RYG +GK +++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 448 LDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTR 507
Query: 221 IDFLKQ 238
+D++++
Sbjct: 508 VDYVRR 513
>ref|XP_002874170.1| hypothetical protein ARALYDRAFT_489269 [Arabidopsis lyrata subsp.
lyrata] gi|297320007|gb|EFH50429.1| hypothetical protein
ARALYDRAFT_489269 [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = +2
Query: 2 NDPMDPRLEVKHFVDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKE 181
N+ P L ++ +DD+L SL P+E +I++RYG +GK +++L E A L IS EMVRK
Sbjct: 437 NNSRQPAL-LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKH 495
Query: 182 ENKAFSKLRDPSRIDFLKQ 238
E KA KL+ +R+D+L+Q
Sbjct: 496 EVKALMKLKHQARVDYLRQ 514
>gb|ESW33340.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
Length = 511
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/66 (48%), Positives = 49/66 (74%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E ++++RYG +GK +++L E A L IS EMVRK E KA KL+ P+R
Sbjct: 443 LDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR 502
Query: 221 IDFLKQ 238
+D+L++
Sbjct: 503 LDYLRR 508
>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
gi|567858878|ref|XP_006422122.1| hypothetical protein
CICLE_v10004760mg [Citrus clementina]
gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X1 [Citrus
sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED:
RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X2 [Citrus
sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED:
RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X3 [Citrus
sinensis] gi|557523994|gb|ESR35361.1| hypothetical
protein CICLE_v10004760mg [Citrus clementina]
gi|557523995|gb|ESR35362.1| hypothetical protein
CICLE_v10004760mg [Citrus clementina]
Length = 513
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/66 (48%), Positives = 48/66 (72%)
Frame = +2
Query: 41 VDDLLASLTPREGRIIKERYGFNGKEEKSLRETAKVLGISNEMVRKEENKAFSKLRDPSR 220
+DD+L SL P+E +I++R+G +GK +++L E A L IS EMVRK E K KL+ P+R
Sbjct: 445 LDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKGLMKLKHPTR 504
Query: 221 IDFLKQ 238
+D+L+Q
Sbjct: 505 VDYLRQ 510