BLASTX nr result
ID: Ephedra25_contig00012013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00012013
(486 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006662464.1| PREDICTED: DNA ligase 1-like [Oryza brachyan... 83 4e-14
ref|XP_003571920.1| PREDICTED: DNA ligase 1-like [Brachypodium d... 79 8e-13
ref|XP_006837932.1| hypothetical protein AMTR_s00102p00018040 [A... 77 2e-12
gb|AAL31067.1|AC090120_13 putative DNA ligase [Oryza sativa Japo... 77 2e-12
gb|EEC67216.1| hypothetical protein OsI_34114 [Oryza sativa Indi... 77 2e-12
gb|EMT12834.1| DNA ligase 1 [Aegilops tauschii] 76 5e-12
ref|XP_006488009.1| PREDICTED: DNA ligase 1-like [Citrus sinensis] 73 4e-11
ref|XP_006424457.1| hypothetical protein CICLE_v10027871mg [Citr... 73 4e-11
ref|XP_002314303.2| hypothetical protein POPTR_0009s01140g [Popu... 73 4e-11
tpg|DAA49534.1| TPA: putative DNA ligase family protein [Zea mays] 73 4e-11
ref|NP_001169987.1| uncharacterized protein LOC100383890 [Zea ma... 73 4e-11
ref|XP_003606343.1| DNA ligase [Medicago truncatula] gi|35550739... 72 1e-10
ref|XP_003539190.2| PREDICTED: DNA ligase 1-like isoform X1 [Gly... 71 1e-10
ref|XP_006591108.1| PREDICTED: DNA ligase 1-like isoform X2 [Gly... 71 1e-10
ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max] 71 1e-10
ref|XP_001777550.1| predicted protein [Physcomitrella patens] gi... 71 2e-10
ref|XP_002972446.1| hypothetical protein SELMODRAFT_97073 [Selag... 70 3e-10
ref|XP_002984278.1| hypothetical protein SELMODRAFT_119719 [Sela... 70 3e-10
gb|EOY34495.1| DNA ligase 1 isoform 1 [Theobroma cacao] 70 4e-10
ref|XP_006303909.1| hypothetical protein CARUB_v10008341mg [Caps... 70 4e-10
>ref|XP_006662464.1| PREDICTED: DNA ligase 1-like [Oryza brachyantha]
Length = 783
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/46 (80%), Positives = 44/46 (95%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDDD 348
SLRFPRLLRVR+DKNP+QAT+SEQ+A+MYRAQKI+HA ND+EDDD
Sbjct: 738 SLRFPRLLRVRDDKNPEQATTSEQVADMYRAQKIHHANNNDDEDDD 783
>ref|XP_003571920.1| PREDICTED: DNA ligase 1-like [Brachypodium distachyon]
Length = 918
Score = 78.6 bits (192), Expect = 8e-13
Identities = 35/46 (76%), Positives = 42/46 (91%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDDD 348
SLRFPRLLRVR+DKNP+ AT+SEQ+A+MYRAQKINH+ D+EDDD
Sbjct: 871 SLRFPRLLRVRDDKNPEHATTSEQVADMYRAQKINHSHNQDDEDDD 916
>ref|XP_006837932.1| hypothetical protein AMTR_s00102p00018040 [Amborella trichopoda]
gi|548840347|gb|ERN00501.1| hypothetical protein
AMTR_s00102p00018040 [Amborella trichopoda]
Length = 696
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDD 351
SLRFPRLLRVREDKNPDQAT SEQ+ EMY AQKINH+G D ++D
Sbjct: 652 SLRFPRLLRVREDKNPDQATCSEQVGEMYLAQKINHSGNQDEDED 696
>gb|AAL31067.1|AC090120_13 putative DNA ligase [Oryza sativa Japonica Group]
gi|31432783|gb|AAP54376.1| DNA ligase, putative,
expressed [Oryza sativa Japonica Group]
gi|40539108|gb|AAR87364.1| putative DNA ligase [Oryza
sativa Japonica Group]
Length = 810
Score = 77.0 bits (188), Expect = 2e-12
Identities = 34/46 (73%), Positives = 43/46 (93%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDDD 348
SLRFPRLLRVR+DKNP+QAT+SEQ+A+MYRAQKI HA N++++DD
Sbjct: 764 SLRFPRLLRVRDDKNPEQATTSEQVADMYRAQKIYHANNNNDDEDD 809
>gb|EEC67216.1| hypothetical protein OsI_34114 [Oryza sativa Indica Group]
gi|222613048|gb|EEE51180.1| hypothetical protein
OsJ_31972 [Oryza sativa Japonica Group]
Length = 627
Score = 77.0 bits (188), Expect = 2e-12
Identities = 34/46 (73%), Positives = 43/46 (93%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDDD 348
SLRFPRLLRVR+DKNP+QAT+SEQ+A+MYRAQKI HA N++++DD
Sbjct: 581 SLRFPRLLRVRDDKNPEQATTSEQVADMYRAQKIYHANNNNDDEDD 626
>gb|EMT12834.1| DNA ligase 1 [Aegilops tauschii]
Length = 613
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/46 (71%), Positives = 42/46 (91%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDDD 348
SLRFPRLLRVR+DKNP+ AT++EQ+A+MYRAQKINH+ ++EDDD
Sbjct: 568 SLRFPRLLRVRDDKNPEHATTAEQVADMYRAQKINHSHNQEDEDDD 613
>ref|XP_006488009.1| PREDICTED: DNA ligase 1-like [Citrus sinensis]
Length = 806
Score = 72.8 bits (177), Expect = 4e-11
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDDD 348
SLRFPRL+RVREDK P+QA+SSEQ+AEMY AQK+NH D+ +DD
Sbjct: 761 SLRFPRLIRVREDKTPEQASSSEQVAEMYTAQKLNHPNNQDDNEDD 806
>ref|XP_006424457.1| hypothetical protein CICLE_v10027871mg [Citrus clementina]
gi|557526391|gb|ESR37697.1| hypothetical protein
CICLE_v10027871mg [Citrus clementina]
Length = 754
Score = 72.8 bits (177), Expect = 4e-11
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDDD 348
SLRFPRL+RVREDK P+QA+SSEQ+AEMY AQK+NH D+ +DD
Sbjct: 709 SLRFPRLIRVREDKTPEQASSSEQVAEMYTAQKLNHPNNQDDNEDD 754
>ref|XP_002314303.2| hypothetical protein POPTR_0009s01140g [Populus trichocarpa]
gi|550330786|gb|EEE88258.2| hypothetical protein
POPTR_0009s01140g [Populus trichocarpa]
Length = 440
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDDD 348
SLRFPRL+RVREDK+P+QA+SSEQ+AEMY AQK NH D+ DDD
Sbjct: 394 SLRFPRLVRVREDKSPEQASSSEQVAEMYNAQKHNHQNNQDDNDDD 439
>tpg|DAA49534.1| TPA: putative DNA ligase family protein [Zea mays]
Length = 909
Score = 72.8 bits (177), Expect = 4e-11
Identities = 31/46 (67%), Positives = 42/46 (91%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDDD 348
SLRFPRLLR+R+DK+P+QAT+S+Q+A+MYR+QKINH ++EDDD
Sbjct: 864 SLRFPRLLRLRDDKSPEQATTSDQVADMYRSQKINHGYNQEDEDDD 909
>ref|NP_001169987.1| uncharacterized protein LOC100383890 [Zea mays]
gi|224032747|gb|ACN35449.1| unknown [Zea mays]
Length = 452
Score = 72.8 bits (177), Expect = 4e-11
Identities = 31/46 (67%), Positives = 42/46 (91%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDDD 348
SLRFPRLLR+R+DK+P+QAT+S+Q+A+MYR+QKINH ++EDDD
Sbjct: 407 SLRFPRLLRLRDDKSPEQATTSDQVADMYRSQKINHGYNQEDEDDD 452
>ref|XP_003606343.1| DNA ligase [Medicago truncatula] gi|355507398|gb|AES88540.1| DNA
ligase [Medicago truncatula]
Length = 149
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/46 (67%), Positives = 39/46 (84%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDDD 348
SLRFPR +RVR DK P+Q++SSEQIAEMY AQK+NH G D+++DD
Sbjct: 104 SLRFPRFIRVRPDKTPEQSSSSEQIAEMYNAQKLNHTGQQDDDEDD 149
>ref|XP_003539190.2| PREDICTED: DNA ligase 1-like isoform X1 [Glycine max]
Length = 740
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/47 (74%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHA-GTNDNEDDD 348
SLRFPRLLRVR DK+P+QA+SSEQ+AEMY AQK NH ND+EDDD
Sbjct: 694 SLRFPRLLRVRPDKSPEQASSSEQVAEMYNAQKQNHTINQNDDEDDD 740
>ref|XP_006591108.1| PREDICTED: DNA ligase 1-like isoform X2 [Glycine max]
Length = 663
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/47 (74%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHA-GTNDNEDDD 348
SLRFPRLLRVR DK+P+QA+SSEQ+AEMY AQK NH ND+EDDD
Sbjct: 617 SLRFPRLLRVRPDKSPEQASSSEQVAEMYNAQKQNHTINQNDDEDDD 663
>ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max]
Length = 776
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/47 (74%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGT-NDNEDDD 348
SLRFPRLLRVR DK P+QA+SSEQ+AEMY+AQK NH ND+EDDD
Sbjct: 730 SLRFPRLLRVRPDKAPEQASSSEQVAEMYKAQKHNHTNNQNDDEDDD 776
>ref|XP_001777550.1| predicted protein [Physcomitrella patens]
gi|162671035|gb|EDQ57593.1| predicted protein
[Physcomitrella patens]
Length = 656
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDDD 348
SLRFPRL+R+REDK P +ATS++Q+AEMYRAQKINH D +DDD
Sbjct: 610 SLRFPRLMRLREDKTPVEATSAQQVAEMYRAQKINHGHGGDADDDD 655
>ref|XP_002972446.1| hypothetical protein SELMODRAFT_97073 [Selaginella moellendorffii]
gi|300159913|gb|EFJ26532.1| hypothetical protein
SELMODRAFT_97073 [Selaginella moellendorffii]
Length = 638
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDD 351
SLRFPRLLR+REDK P+QATSS+Q+ ++YRAQKINH T NEDD
Sbjct: 593 SLRFPRLLRMREDKKPEQATSSDQVVDLYRAQKINHRSTK-NEDD 636
>ref|XP_002984278.1| hypothetical protein SELMODRAFT_119719 [Selaginella moellendorffii]
gi|300148127|gb|EFJ14788.1| hypothetical protein
SELMODRAFT_119719 [Selaginella moellendorffii]
Length = 638
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDD 351
SLRFPRLLR+REDK P+QATSS+Q+ ++YRAQKINH T NEDD
Sbjct: 593 SLRFPRLLRMREDKKPEQATSSDQVVDLYRAQKINHRSTK-NEDD 636
>gb|EOY34495.1| DNA ligase 1 isoform 1 [Theobroma cacao]
Length = 800
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDDD 348
SLRFPRL+RVREDK P+QA+SSEQ+AEMY AQK N A D+ DDD
Sbjct: 755 SLRFPRLVRVREDKAPEQASSSEQVAEMYNAQKHNQANNEDDGDDD 800
>ref|XP_006303909.1| hypothetical protein CARUB_v10008341mg [Capsella rubella]
gi|482572620|gb|EOA36807.1| hypothetical protein
CARUB_v10008341mg [Capsella rubella]
Length = 793
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = -2
Query: 485 SLRFPRLLRVREDKNPDQATSSEQIAEMYRAQKINHAGTNDNEDDD 348
SLRFPRLLRVREDK P++ATSSEQIA+MY+AQK NH DDD
Sbjct: 748 SLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNHPSNEGKGDDD 793