BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00011378
         (508 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22123.1| polyprotein [Prunus avium]                              77   2e-12
gb|ABG22121.1| polyprotein [Solanum melongena]                         68   1e-09
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]           65   1e-08
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                              58   1e-06
gb|AFB73911.1| polyprotein [Citrus sinensis]                           57   3e-06
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    57   3e-06
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]    57   3e-06
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]    57   3e-06
emb|CAN65504.1| hypothetical protein VITISV_028342 [Vitis vinifera]    57   3e-06
emb|CAN61435.1| hypothetical protein VITISV_033767 [Vitis vinifera]    57   3e-06
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    56   4e-06
emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera]    56   4e-06
emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]    56   4e-06
emb|CAN66898.1| hypothetical protein VITISV_037436 [Vitis vinifera]    56   4e-06
emb|CAN65867.1| hypothetical protein VITISV_034935 [Vitis vinifera]    56   4e-06
emb|CAN71038.1| hypothetical protein VITISV_011062 [Vitis vinifera]    56   4e-06
emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]    56   4e-06
emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]    56   4e-06
emb|CAN67882.1| hypothetical protein VITISV_022356 [Vitis vinifera]    56   4e-06
emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera]    56   4e-06

>gb|ABG22123.1| polyprotein [Prunus avium]
          Length = 276

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/48 (77%), Positives = 41/48 (85%)
 Frame = +3

Query: 363 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDI 506
           SLMYAMVCTRPD  QAVSI+ RYMHNPGKGH QA+K IL  ILGT+D+
Sbjct: 111 SLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDV 158


>gb|ABG22121.1| polyprotein [Solanum melongena]
          Length = 361

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 33/48 (68%), Positives = 38/48 (79%)
 Frame = +3

Query: 363 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDI 506
           SLMYAMVCTR D  QAVS++ RYMH+PGKGH QA+K IL  I  T+DI
Sbjct: 196 SLMYAMVCTRSDISQAVSVVSRYMHDPGKGHWQAVKWILRYIKNTVDI 243


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/51 (58%), Positives = 39/51 (76%)
 Frame = +3

Query: 354 IMHSLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDI 506
           ++ SL+YAMVCTRPD  QAVS++ RYMHNPGK    A+K IL  + GT+D+
Sbjct: 81  VVGSLIYAMVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDV 131


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/48 (56%), Positives = 34/48 (70%)
 Frame = +3

Query: 363  SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDI 506
            SLM+AM+CTRPD  QAV ++ RYM NPG+ H   +K IL  I GT D+
Sbjct: 1087 SLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDV 1134


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = +3

Query: 363  SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDI 506
            SLM+AM+CTRPD  QAV ++ RYM NPG  H  A+K IL  I GT D+
Sbjct: 1098 SLMFAMICTRPDIAQAVGVVSRYMANPGGEHWIAVKRILRYIRGTSDV 1145


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/48 (56%), Positives = 34/48 (70%)
 Frame = +3

Query: 363  SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDI 506
            SLMYAMVCTRPD   AVS++ R+M  PG+ H QA+K I   + GT D+
Sbjct: 1098 SLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDV 1145


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/51 (50%), Positives = 37/51 (72%)
 Frame = +3

Query: 354  IMHSLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDI 506
            ++ SLMYAMVCTRPD   AVS++ R+M NPGK H +A+K I+  + G+  +
Sbjct: 1182 VVGSLMYAMVCTRPDLAFAVSVVSRFMSNPGKAHWEAVKWIMRYLKGSSSV 1232


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/51 (50%), Positives = 37/51 (72%)
 Frame = +3

Query: 354  IMHSLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDI 506
            ++ SLMYAMVCTRPD   AVS++ R+M NPGK H +A+K I+  + G+  +
Sbjct: 1419 VVGSLMYAMVCTRPDLAFAVSVVSRFMSNPGKAHWEAVKWIMRYLKGSSSV 1469


>emb|CAN65504.1| hypothetical protein VITISV_028342 [Vitis vinifera]
          Length = 1252

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/47 (57%), Positives = 34/47 (72%)
 Frame = +3

Query: 363 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTID 503
           SLMYAMVCTRPD   AV I+ R+M  PGK H +A+K IL  + G++D
Sbjct: 859 SLMYAMVCTRPDIAHAVGIVSRFMSRPGKQHWEAVKWILRYLKGSLD 905


>emb|CAN61435.1| hypothetical protein VITISV_033767 [Vitis vinifera]
          Length = 1298

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +3

Query: 363  SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTID 503
            SLMYAMVCTRPD   AV ++ R+M  PGK H +A+K IL  + G++D
Sbjct: 1088 SLMYAMVCTRPDIAHAVGVVSRFMSRPGKXHWEAVKWILRYLKGSLD 1134


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/45 (57%), Positives = 33/45 (73%)
 Frame = +3

Query: 363  SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGT 497
            SLMYAMVCTRPD   AV ++ R++ NPGK H +A+K IL  + GT
Sbjct: 1117 SLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGT 1161


>emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera]
          Length = 1264

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +3

Query: 363  SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTID 503
            SLMYAMVCTRPD   AV ++ R+M  PGK H +A+K IL  + G++D
Sbjct: 1054 SLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHXEAVKWILRYLKGSLD 1100


>emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]
          Length = 1211

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +3

Query: 363  SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTID 503
            SLMYAMVCTRPD   AV ++ R+M  PGK H +A+K IL  + G++D
Sbjct: 1001 SLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLD 1047


>emb|CAN66898.1| hypothetical protein VITISV_037436 [Vitis vinifera]
          Length = 1183

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +3

Query: 363  SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTID 503
            SLMYAMVCTRPD   AV ++ R+M  PGK H +A+K IL  + G++D
Sbjct: 973  SLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLD 1019


>emb|CAN65867.1| hypothetical protein VITISV_034935 [Vitis vinifera]
          Length = 1137

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +3

Query: 363  SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTID 503
            SLMYAMVCTRPD   AV ++ R+M  PGK H +A+K IL  + G++D
Sbjct: 927  SLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLD 973


>emb|CAN71038.1| hypothetical protein VITISV_011062 [Vitis vinifera]
          Length = 646

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +3

Query: 363 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTID 503
           SLMYAMVCTRPD   AV ++ R+M  PGK H +A+K IL  + G++D
Sbjct: 528 SLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLD 574


>emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]
          Length = 1279

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +3

Query: 363  SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTID 503
            SLMYAMVCTRPD   AV ++ R+M  PGK H +A+K IL  + G++D
Sbjct: 1069 SLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLD 1115


>emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]
          Length = 1222

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +3

Query: 363  SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTID 503
            SLMYAMVCTRPD   AV ++ R+M  PGK H +A+K IL  + G++D
Sbjct: 1012 SLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLD 1058


>emb|CAN67882.1| hypothetical protein VITISV_022356 [Vitis vinifera]
          Length = 1299

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +3

Query: 363  SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTID 503
            SLMYAMVCTRPD   AV ++ R+M  PGK H +A+K IL  + G++D
Sbjct: 1089 SLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLD 1135


>emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera]
          Length = 1287

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +3

Query: 363  SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTID 503
            SLMYAMVCTRPD   AV ++ R+M  PGK H +A+K IL  + G++D
Sbjct: 1077 SLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLD 1123