BLASTX nr result
ID: Ephedra25_contig00011367
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00011367
(744 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indi... 42 8e-07
ref|XP_002329104.1| predicted protein [Populus trichocarpa] gi|5... 43 8e-07
ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group] g... 42 8e-07
gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japo... 42 8e-07
ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 40 1e-06
tpg|DAA39684.1| TPA: putative regulator of chromosome condensati... 40 1e-06
ref|NP_566512.1| regulator of chromosome condensation 1 [Arabido... 46 3e-06
gb|AAK59406.1| unknown protein [Arabidopsis thaliana] 46 3e-06
ref|XP_006297528.1| hypothetical protein CARUB_v10013551mg [Caps... 44 4e-06
>gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
Length = 907
Score = 42.4 bits (98), Expect(2) = 8e-07
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -2
Query: 347 QLAHGDTLEKTIPRNVERFNTLGPILQIAAGTHFIHIGLDRG 222
QL HGDT+++ P+ VE F L P++Q+AAG + D G
Sbjct: 239 QLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDG 280
Score = 37.4 bits (85), Expect(2) = 8e-07
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = -3
Query: 424 RVAVGLSFTVILIRNGQIFTCRSNS 350
+VA GLSFTVIL +GQ++TC SN+
Sbjct: 212 QVATGLSFTVILTTDGQVYTCGSNT 236
>ref|XP_002329104.1| predicted protein [Populus trichocarpa]
gi|566154070|ref|XP_006370290.1| regulator of chromosome
condensation family protein [Populus trichocarpa]
gi|550349469|gb|ERP66859.1| regulator of chromosome
condensation family protein [Populus trichocarpa]
Length = 492
Score = 43.1 bits (100), Expect(2) = 8e-07
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -2
Query: 347 QLAHGDTLEKTIPRNVERFNTLGPILQIAAGTHFIHIGLDRG 222
QL HGDTL++ P+ +E +GP++QIAAG ++ D G
Sbjct: 247 QLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLAVTDNG 288
Score = 36.6 bits (83), Expect(2) = 8e-07
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = -3
Query: 424 RVAVGLSFTVILIRNGQIFTCRSNS 350
+V+VGL+FTV L R GQ++TC SN+
Sbjct: 220 QVSVGLNFTVFLTRQGQLYTCGSNT 244
>ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
gi|28564665|dbj|BAC57847.1| putative UVB-resistance
protein UVR8 [Oryza sativa Japonica Group]
gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa
Japonica Group] gi|215678781|dbj|BAG95218.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 484
Score = 42.4 bits (98), Expect(2) = 8e-07
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -2
Query: 347 QLAHGDTLEKTIPRNVERFNTLGPILQIAAGTHFIHIGLDRG 222
QL HGDT+++ P+ VE F L P++Q+AAG + D G
Sbjct: 239 QLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDG 280
Score = 37.4 bits (85), Expect(2) = 8e-07
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = -3
Query: 424 RVAVGLSFTVILIRNGQIFTCRSNS 350
+VA GLSFTVIL +GQ++TC SN+
Sbjct: 212 QVATGLSFTVILTTDGQVYTCGSNT 236
>gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
Length = 484
Score = 42.4 bits (98), Expect(2) = 8e-07
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -2
Query: 347 QLAHGDTLEKTIPRNVERFNTLGPILQIAAGTHFIHIGLDRG 222
QL HGDT+++ P+ VE F L P++Q+AAG + D G
Sbjct: 239 QLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDG 280
Score = 37.4 bits (85), Expect(2) = 8e-07
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = -3
Query: 424 RVAVGLSFTVILIRNGQIFTCRSNS 350
+VA GLSFTVIL +GQ++TC SN+
Sbjct: 212 QVATGLSFTVILTTDGQVYTCGSNT 236
>ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 485
Score = 39.7 bits (91), Expect(2) = 1e-06
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -2
Query: 347 QLAHGDTLEKTIPRNVERFNTLGPILQIAAGTHFIHIGLDRG 222
QL HGDT+++ P+ +E F P++Q+AAG + D G
Sbjct: 238 QLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFAVTDDG 279
Score = 39.3 bits (90), Expect(2) = 1e-06
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -3
Query: 424 RVAVGLSFTVILIRNGQIFTCRSNS 350
+VA GLSFTVIL R GQ++TC SN+
Sbjct: 211 QVATGLSFTVILTREGQVYTCGSNT 235
>tpg|DAA39684.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 371
Score = 39.7 bits (91), Expect(2) = 1e-06
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = -3
Query: 424 RVAVGLSFTVILIRNGQIFTCRSNS 350
+VA GLSFTVIL R+GQ++TC SN+
Sbjct: 211 QVATGLSFTVILTRDGQVYTCGSNT 235
Score = 39.3 bits (90), Expect(2) = 1e-06
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 347 QLAHGDTLEKTIPRNVERFNTLGPILQIAAGTHFIHIGLDRG 222
QL HGDT+++ P+ +E F P++QIAAG + D G
Sbjct: 238 QLGHGDTIDRATPKLIELFEGSTPVVQIAAGASYTFAVTDDG 279
>ref|NP_566512.1| regulator of chromosome condensation 1 [Arabidopsis thaliana]
gi|42572455|ref|NP_974323.1| regulator of chromosome
condensation 1 [Arabidopsis thaliana]
gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis
thaliana] gi|15795108|dbj|BAB02372.1| unnamed protein
product [Arabidopsis thaliana]
gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis
thaliana] gi|332642152|gb|AEE75673.1| regulator of
chromosome condensation 1 [Arabidopsis thaliana]
gi|332642153|gb|AEE75674.1| regulator of chromosome
condensation 1 [Arabidopsis thaliana]
Length = 488
Score = 45.8 bits (107), Expect(2) = 3e-06
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = -2
Query: 347 QLAHGDTLEKTIPRNVERFNTLGPILQIAAGTHFI 243
QL HGDTL++ +P+ VE T+GP++QIAAG ++
Sbjct: 247 QLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYV 281
Score = 32.0 bits (71), Expect(2) = 3e-06
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 424 RVAVGLSFTVILIRNGQIFTCRSNS 350
+VA GL FTV L R G +TC SN+
Sbjct: 220 QVAAGLHFTVFLSREGHAYTCGSNT 244
>gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
Length = 488
Score = 45.8 bits (107), Expect(2) = 3e-06
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = -2
Query: 347 QLAHGDTLEKTIPRNVERFNTLGPILQIAAGTHFI 243
QL HGDTL++ +P+ VE T+GP++QIAAG ++
Sbjct: 247 QLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYV 281
Score = 32.0 bits (71), Expect(2) = 3e-06
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 424 RVAVGLSFTVILIRNGQIFTCRSNS 350
+VA GL FTV L R G +TC SN+
Sbjct: 220 QVAAGLHFTVFLSREGHAYTCGSNT 244
>ref|XP_006297528.1| hypothetical protein CARUB_v10013551mg [Capsella rubella]
gi|482566237|gb|EOA30426.1| hypothetical protein
CARUB_v10013551mg [Capsella rubella]
Length = 488
Score = 43.5 bits (101), Expect(2) = 4e-06
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = -2
Query: 347 QLAHGDTLEKTIPRNVERFNTLGPILQIAAGTHFI 243
QL HGDT + +P+ VE F ++GP++Q+AAG ++
Sbjct: 247 QLGHGDTADSPVPKVVEFFKSIGPVVQVAAGPSYV 281
Score = 33.9 bits (76), Expect(2) = 4e-06
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -3
Query: 424 RVAVGLSFTVILIRNGQIFTCRSNS 350
+VA GL FTV L R G+++TC SN+
Sbjct: 220 QVAAGLHFTVFLSREGRVYTCGSNT 244