BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00011158
         (402 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76777.1| unknown [Picea sitchensis]                              70   3e-10
gb|EXB46008.1| Pre-mRNA-processing factor 39 [Morus notabilis]         59   7e-07
ref|XP_006403157.1| hypothetical protein EUTSA_v10003154mg [Eutr...    58   1e-06
ref|XP_002889490.1| hypothetical protein ARALYDRAFT_333729 [Arab...    56   6e-06
gb|AAC16751.1| Contains similarity to pre-mRNA processing protei...    55   7e-06
ref|NP_001184905.1| pre-mRNA-processing factor 39  [Arabidopsis ...    55   7e-06
ref|NP_001154302.1| pre-mRNA-processing factor 39  [Arabidopsis ...    55   7e-06
ref|XP_002526546.1| Pre-mRNA-processing protein prp39, putative ...    55   7e-06
ref|NP_563700.1| pre-mRNA-processing factor 39  [Arabidopsis tha...    55   7e-06
gb|EOX94328.1| Tetratricopeptide repeat (TPR)-like superfamily p...    55   1e-05
gb|EOX94326.1| Tetratricopeptide repeat (TPR)-like superfamily p...    55   1e-05

>gb|ADE76777.1| unknown [Picea sitchensis]
          Length = 268

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/58 (63%), Positives = 42/58 (72%), Gaps = 3/58 (5%)
 Frame = +3

Query: 9   FLPHKSTGESRKRGAQDSLTSDKSKVQKGYTGASGAVSPAQ---TVYQNGQAQWGANY 173
           FLPHKS+ ES+KR   DS+ SDK+KV K YT A  AVSPAQ   + Y NGQAQWGA Y
Sbjct: 143 FLPHKSSSESKKRSL-DSIASDKNKVAKTYTTAPAAVSPAQSGMSAYPNGQAQWGAGY 199


>gb|EXB46008.1| Pre-mRNA-processing factor 39 [Morus notabilis]
          Length = 934

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/55 (49%), Positives = 33/55 (60%)
 Frame = +3

Query: 9   FLPHKSTGESRKRGAQDSLTSDKSKVQKGYTGASGAVSPAQTVYQNGQAQWGANY 173
           FLPH+ST E +KR A+D L SDK+K+ K Y+G    V      Y N Q QW A Y
Sbjct: 779 FLPHRSTSELKKRHAEDFLASDKTKLAKSYSGVPSPVQSLMGTYPNTQNQWAAGY 833


>ref|XP_006403157.1| hypothetical protein EUTSA_v10003154mg [Eutrema salsugineum]
           gi|557104270|gb|ESQ44610.1| hypothetical protein
           EUTSA_v10003154mg [Eutrema salsugineum]
          Length = 767

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/55 (52%), Positives = 35/55 (63%)
 Frame = +3

Query: 9   FLPHKSTGESRKRGAQDSLTSDKSKVQKGYTGASGAVSPAQTVYQNGQAQWGANY 173
           F PH+ T E RKR A+D L+SDKSK+ K Y G +  V P      NGQ+QW ANY
Sbjct: 622 FQPHRRTPELRKRSAEDFLSSDKSKIAKTYDGTTPPVQPV----PNGQSQWPANY 672


>ref|XP_002889490.1| hypothetical protein ARALYDRAFT_333729 [Arabidopsis lyrata subsp.
           lyrata] gi|297335332|gb|EFH65749.1| hypothetical protein
           ARALYDRAFT_333729 [Arabidopsis lyrata subsp. lyrata]
          Length = 1328

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/55 (47%), Positives = 33/55 (60%)
 Frame = +3

Query: 9   FLPHKSTGESRKRGAQDSLTSDKSKVQKGYTGASGAVSPAQTVYQNGQAQWGANY 173
           FLPH+ST + +KR A D L+SD++K+ K Y G   A  P    Y N QAQW   Y
Sbjct: 614 FLPHRSTSDLKKRSADDFLSSDRTKMAKTYNGTPPA-QPVSNAYPNTQAQWSGGY 667


>gb|AAC16751.1| Contains similarity to pre-mRNA processing protein PRP39 gb|L29224
           from S. cerevisiae. ESTs gb|R64908 and gb|T88158,
           gb|N38703 and gb|AA651043 come from this gene
           [Arabidopsis thaliana]
          Length = 1345

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/55 (47%), Positives = 31/55 (56%)
 Frame = +3

Query: 9   FLPHKSTGESRKRGAQDSLTSDKSKVQKGYTGASGAVSPAQTVYQNGQAQWGANY 173
           F PH+ST E +KR A D L SD++K+ K Y G   A  P    Y N QAQW   Y
Sbjct: 616 FYPHRSTSELKKRSADDFLASDRTKMAKTYNGTPPA-QPVSNAYPNAQAQWSGGY 669


>ref|NP_001184905.1| pre-mRNA-processing factor 39  [Arabidopsis thaliana]
           gi|332189533|gb|AEE27654.1| pre-mRNA-processing factor
           39 [Arabidopsis thaliana]
          Length = 823

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/55 (47%), Positives = 31/55 (56%)
 Frame = +3

Query: 9   FLPHKSTGESRKRGAQDSLTSDKSKVQKGYTGASGAVSPAQTVYQNGQAQWGANY 173
           F PH+ST E +KR A D L SD++K+ K Y G   A  P    Y N QAQW   Y
Sbjct: 671 FYPHRSTSELKKRSADDFLASDRTKMAKTYNGTPPA-QPVSNAYPNAQAQWSGGY 724


>ref|NP_001154302.1| pre-mRNA-processing factor 39  [Arabidopsis thaliana]
           gi|332189532|gb|AEE27653.1| pre-mRNA-processing factor
           39 [Arabidopsis thaliana]
          Length = 582

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/55 (47%), Positives = 31/55 (56%)
 Frame = +3

Query: 9   FLPHKSTGESRKRGAQDSLTSDKSKVQKGYTGASGAVSPAQTVYQNGQAQWGANY 173
           F PH+ST E +KR A D L SD++K+ K Y G   A  P    Y N QAQW   Y
Sbjct: 430 FYPHRSTSELKKRSADDFLASDRTKMAKTYNGTPPA-QPVSNAYPNAQAQWSGGY 483


>ref|XP_002526546.1| Pre-mRNA-processing protein prp39, putative [Ricinus communis]
           gi|223534107|gb|EEF35824.1| Pre-mRNA-processing protein
           prp39, putative [Ricinus communis]
          Length = 829

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/55 (49%), Positives = 31/55 (56%)
 Frame = +3

Query: 9   FLPHKSTGESRKRGAQDSLTSDKSKVQKGYTGASGAVSPAQTVYQNGQAQWGANY 173
           FLPH+S  E +KR A D LTSDKSK+ K Y  A   V      Y + Q QW A Y
Sbjct: 677 FLPHRSKSEFKKRHADDYLTSDKSKIAKAYGDAPSPVQSLMGAYPSTQNQWAAGY 731


>ref|NP_563700.1| pre-mRNA-processing factor 39  [Arabidopsis thaliana]
           gi|15810565|gb|AAL07170.1| unknown protein [Arabidopsis
           thaliana] gi|20259567|gb|AAM14126.1| unknown protein
           [Arabidopsis thaliana] gi|21593463|gb|AAM65430.1|
           unknown [Arabidopsis thaliana]
           gi|332189531|gb|AEE27652.1| pre-mRNA-processing factor
           39 [Arabidopsis thaliana]
          Length = 768

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/55 (47%), Positives = 31/55 (56%)
 Frame = +3

Query: 9   FLPHKSTGESRKRGAQDSLTSDKSKVQKGYTGASGAVSPAQTVYQNGQAQWGANY 173
           F PH+ST E +KR A D L SD++K+ K Y G   A  P    Y N QAQW   Y
Sbjct: 616 FYPHRSTSELKKRSADDFLASDRTKMAKTYNGTPPA-QPVSNAYPNAQAQWSGGY 669


>gb|EOX94328.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 3
           [Theobroma cacao]
          Length = 538

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/55 (47%), Positives = 32/55 (58%)
 Frame = +3

Query: 9   FLPHKSTGESRKRGAQDSLTSDKSKVQKGYTGASGAVSPAQTVYQNGQAQWGANY 173
           FLPH+   E RKR A+D L+SDK+K+ K Y+GA          Y N Q QW A Y
Sbjct: 384 FLPHRPMSELRKRHAEDFLSSDKTKLAKSYSGAPSPGQSLMGAYPNAQNQWPAGY 438


>gb|EOX94326.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508702431|gb|EOX94327.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 815

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/55 (47%), Positives = 32/55 (58%)
 Frame = +3

Query: 9   FLPHKSTGESRKRGAQDSLTSDKSKVQKGYTGASGAVSPAQTVYQNGQAQWGANY 173
           FLPH+   E RKR A+D L+SDK+K+ K Y+GA          Y N Q QW A Y
Sbjct: 661 FLPHRPMSELRKRHAEDFLSSDKTKLAKSYSGAPSPGQSLMGAYPNAQNQWPAGY 715