BLASTX nr result

ID: Ephedra25_contig00011157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00011157
         (429 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004300686.1| PREDICTED: AP-4 complex subunit epsilon-like...    57   2e-06
ref|XP_002458982.1| hypothetical protein SORBIDRAFT_03g043730 [S...    56   6e-06

>ref|XP_004300686.1| PREDICTED: AP-4 complex subunit epsilon-like [Fragaria vesca subsp.
            vesca]
          Length = 968

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/69 (42%), Positives = 39/69 (56%)
 Frame = +2

Query: 2    AKSDAPNQKVNATPAADLLDLSDDVPTSNASTADPFKQLEGLLESAQDASLPANAPSVTK 181
            A SD   +K+N  P  DLLD SD   TS A + DPF+QLEGLL+  +  S   N  +   
Sbjct: 826  AHSDTVVEKINREPTPDLLDFSDLAVTSTAPSVDPFQQLEGLLDQTEATSTMNNGAAGAS 885

Query: 182  NSVDLMSLY 208
             + ++M LY
Sbjct: 886  RTPEIMGLY 894


>ref|XP_002458982.1| hypothetical protein SORBIDRAFT_03g043730 [Sorghum bicolor]
            gi|241930957|gb|EES04102.1| hypothetical protein
            SORBIDRAFT_03g043730 [Sorghum bicolor]
          Length = 969

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 45/135 (33%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
 Frame = +2

Query: 23   QKVNATPAADLLDLSDDVPTSNASTADPFKQLEGLLESAQDASLPANAPSV-TKNSVDLM 199
            Q + A P  DLLDL D+  +SN   ADPF QLEGLL  A  A + +  P+     + DLM
Sbjct: 837  QVIPAAPPPDLLDLGDEPVSSNPPLADPFSQLEGLLGPASAAPVLSGTPATGASKAPDLM 896

Query: 200  SLYEXXXXXXXXXXXXGQVLASVWEDNNFGGVQTTEXXXXXXXXXXXXAVELATGKPSQP 379
            S++                +AS   D   G V +T                   G  +  
Sbjct: 897  SIFSDDVPTG---------VASGSTDPTLGDVNSTSSH---------------KGATAVA 932

Query: 380  VKKGLSSQESLQKDA 424
             KKG S Q++LQKDA
Sbjct: 933  SKKGPSLQDALQKDA 947


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