BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00011115
         (616 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...   190   3e-46
gb|ABR16307.1| unknown [Picea sitchensis]                             179   7e-43
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   174   1e-41
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   174   1e-41
gb|AGW47867.1| polyprotein [Phaseolus vulgaris]                       174   2e-41
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              173   3e-41
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              171   1e-40
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]         170   3e-40
ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669...   169   4e-40
gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Jap...   169   4e-40
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              169   4e-40
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc...   169   4e-40
ref|XP_003376336.1| retrovirus-related Pol polyprotein from tran...   169   6e-40
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     169   6e-40
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   169   6e-40
gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]     168   1e-39
gb|ABA94191.1| retrotransposon protein, putative, Ty1-copia subc...   168   1e-39
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              168   1e-39
emb|CAN83869.1| hypothetical protein VITISV_037705 [Vitis vinifera]   167   2e-39
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   167   2e-39

>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score =  190 bits (482), Expect = 3e-46
 Identities = 92/204 (45%), Positives = 137/204 (67%), Gaps = 1/204 (0%)
 Frame = +3

Query: 3    TSRILELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV 182
            T++ LELIHSD+ G   T+S  G RYF++FIDDFSR ++VY LK++ EV  KFK ++  V
Sbjct: 512  TNKTLELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYFLKNKSEVITKFKIFKPYV 571

Query: 183  *NKKGVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECV 362
             N+   ++  LR+DGG E+ S EF+  CQ+ GI  EIT PYSPQQNG+ ER+N+TL+E  
Sbjct: 572  ENQSESRIKRLRTDGGGEFLSREFIKLCQESGIHHEITTPYSPQQNGVAERRNRTLVEMA 631

Query: 363  RFLLDNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKI-PKEVWKKEKINI*YLKIFGDEY 539
            R +++   LS K+W + + TS Y+ N  P+ + +  + P E+W  +K ++ +LK+FG   
Sbjct: 632  RSMIEEKKLSNKFWAEAIATSTYLQNRLPSKSLEKGVTPMEIWSGKKPSVDHLKVFGCVC 691

Query: 540  FCLVPKELRKKLDLKVRSDIFLGY 611
            +  +P E R+KLD K +  IF+GY
Sbjct: 692  YIHIPDEKRRKLDTKAKQGIFVGY 715


>gb|ABR16307.1| unknown [Picea sitchensis]
          Length = 407

 Score =  179 bits (453), Expect = 7e-43
 Identities = 89/199 (44%), Positives = 122/199 (61%)
 Frame = +3

Query: 15  LELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV*NKK 194
           L L+HSD+ G     S  G RY ++FIDD+SR  +VY LK++DEVFEKFKE++  V  + 
Sbjct: 134 LHLVHSDLMGPLEHPSISGSRYVLTFIDDYSRRIWVYFLKNKDEVFEKFKEFKAFVEKQS 193

Query: 195 GVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECVRFLL 374
           G  +  LR+D G EY + EF   C+  GI RE TVPY+PQQNG+ ERKN+TLME  R +L
Sbjct: 194 GKSIKILRTDNGKEYVNKEFDHYCKYNGIKREHTVPYTPQQNGVAERKNRTLMEMARCML 253

Query: 375 DNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYFCLVP 554
               +  K+W + + T+ YI N  P      K P+E W + K  + + K+FG + +  +P
Sbjct: 254 HARNMDPKFWAEAINTATYIVNRTPTIAVKHKTPEEAWSRRKPTVSHFKVFGCDVYVHIP 313

Query: 555 KELRKKLDLKVRSDIFLGY 611
            E RKKLD K    I +GY
Sbjct: 314 DEKRKKLDRKSHKCIMVGY 332


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  174 bits (442), Expect = 1e-41
 Identities = 92/203 (45%), Positives = 134/203 (66%)
 Frame = +3

Query: 3    TSRILELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV 182
            T+ +LE IHSD++G +P +S+ G RY+V+FIDDFSR  +VY LK++DEVF KFKE++ +V
Sbjct: 587  TNGVLEYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMV 646

Query: 183  *NKKGVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECV 362
              + G  +  LR+D GLE+ + +F   C+K+GI R  TV ++PQQNG+ ER NQTL++  
Sbjct: 647  EKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRA 706

Query: 363  RFLLDNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYF 542
            R +  +AGLSKK+W + + T+ Y+ N  P++  D K P+EVW  +  N   LKIFG   +
Sbjct: 707  RCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAY 766

Query: 543  CLVPKELRKKLDLKVRSDIFLGY 611
              V      KL+ +    IFLGY
Sbjct: 767  AHVSD---GKLEPRAMKCIFLGY 786


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  174 bits (442), Expect = 1e-41
 Identities = 92/203 (45%), Positives = 134/203 (66%)
 Frame = +3

Query: 3    TSRILELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV 182
            T+ +LE IHSD++G +P +S+ G RY+V+FIDDFSR  +VY LK++DEVF KFKE++ +V
Sbjct: 800  TNGVLEYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMV 859

Query: 183  *NKKGVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECV 362
              + G  +  LR+D GLE+ + +F   C+K+GI R  TV ++PQQNG+ ER NQTL++  
Sbjct: 860  EKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRA 919

Query: 363  RFLLDNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYF 542
            R +  +AGLSKK+W + + T+ Y+ N  P++  D K P+EVW  +  N   LKIFG   +
Sbjct: 920  RCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAY 979

Query: 543  CLVPKELRKKLDLKVRSDIFLGY 611
              V      KL+ +    IFLGY
Sbjct: 980  AHVSD---GKLEPRAMKCIFLGY 999


>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
          Length = 1471

 Score =  174 bits (441), Expect = 2e-41
 Identities = 82/199 (41%), Positives = 130/199 (65%)
 Frame = +3

Query: 15   LELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV*NKK 194
            LELIH+DI G    +S+ G RYF++FIDDFSR ++VY LK + E FE FK+++ +V    
Sbjct: 548  LELIHTDICGPITPESFSGKRYFITFIDDFSRKTWVYFLKEKSEAFEVFKKFKVMVERTT 607

Query: 195  GVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECVRFLL 374
              ++  +RSD G EY ST F+  C+++GI R +T PY+PQQNG+ ERKN+T+++ VR +L
Sbjct: 608  DKQIKAVRSDRGGEYTSTTFMEYCEEQGIRRFLTAPYTPQQNGVAERKNRTILDMVRSML 667

Query: 375  DNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYFCLVP 554
             +  + K++W + +  + Y+ N  P+   D + P+E W  +K  + +LK+FG   +  VP
Sbjct: 668  KSKKMPKEFWAEAVQCAIYVQNRCPHVKLDDQTPQEAWSGQKPTVSHLKVFGSVAYAHVP 727

Query: 555  KELRKKLDLKVRSDIFLGY 611
             + R KL+ K +  +F+GY
Sbjct: 728  DQRRTKLEDKSKRYVFIGY 746


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  173 bits (439), Expect = 3e-41
 Identities = 88/203 (43%), Positives = 132/203 (65%)
 Frame = +3

Query: 3    TSRILELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV 182
            +  IL+LIHSD++  +P  S  G RYFVSFIDD+SR  +VY +K + +VF  FK ++  +
Sbjct: 478  SKHILDLIHSDVWE-SPELSLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQI 536

Query: 183  *NKKGVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECV 362
              + G K+ CLR+D G EY   EFLA C+++GI R+ TV ++PQQNG+ ER N+TL+E  
Sbjct: 537  ELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERT 596

Query: 363  RFLLDNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYF 542
            R +L  AG++K +W + + T+ Y+ N  P++  D+K P E+WK + ++   L +FG   +
Sbjct: 597  RAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVY 656

Query: 543  CLVPKELRKKLDLKVRSDIFLGY 611
             +   + R KLD K R  IFLGY
Sbjct: 657  VMYNSQERTKLDPKSRKCIFLGY 679


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  171 bits (433), Expect = 1e-40
 Identities = 87/203 (42%), Positives = 131/203 (64%)
 Frame = +3

Query: 3    TSRILELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV 182
            +  IL+LIHSD++  +P  S  G RYFVSFIDD+SR  +VY +K + +VF  FK ++  +
Sbjct: 478  SKHILDLIHSDVWE-SPKLSLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQI 536

Query: 183  *NKKGVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECV 362
              + G K+ CLR+D G EY   EFLA C+++GI R+ TV ++PQQNG+ ER N+TL+E  
Sbjct: 537  ELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERT 596

Query: 363  RFLLDNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYF 542
            R +L  A ++K +W + + T+ Y+ N  P++  D+K P E+WK + ++   L +FG   +
Sbjct: 597  RAMLKTAEMAKSFWAEAVKTACYVINRSPSTTIDLKTPMEMWKGKPVDYSSLHVFGCPVY 656

Query: 543  CLVPKELRKKLDLKVRSDIFLGY 611
             +   + R KLD K R  IFLGY
Sbjct: 657  VMYNSQERTKLDPKSRKCIFLGY 679


>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  170 bits (430), Expect = 3e-40
 Identities = 91/199 (45%), Positives = 125/199 (62%)
 Frame = +3

Query: 15   LELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV*NKK 194
            LEL+HSD+  +    +  G RYF++FIDD +R+ +VYLLK++DE  + FK Y+  V N+ 
Sbjct: 490  LELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQL 549

Query: 195  GVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECVRFLL 374
              K+  LRSD G E+ S EF   C++ GI  E T PYSP+ NG+ ERKN+TL + V  +L
Sbjct: 550  DRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAML 609

Query: 375  DNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYFCLVP 554
            D AGL K WW + LLTSN++ N  PN N D K P E+W   K ++ YL+I+G      VP
Sbjct: 610  DTAGLPKAWWGEALLTSNHVLNRVPNRNKD-KTPYEIWIGRKPSLSYLRIWGCLAKVNVP 668

Query: 555  KELRKKLDLKVRSDIFLGY 611
               ++KL  K    +FLGY
Sbjct: 669  ITKKRKLGPKTVDCVFLGY 687


>ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669657 [Glycine max]
          Length = 711

 Score =  169 bits (429), Expect = 4e-40
 Identities = 84/199 (42%), Positives = 125/199 (62%)
 Frame = +3

Query: 15  LELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV*NKK 194
           LELIH+D+ G     S+  ++YF+ FIDD+SR ++VY LK + EVFE FK+++ LV  + 
Sbjct: 400 LELIHTDVCGPIKPNSFGKNKYFLLFIDDYSRKTWVYFLKEKSEVFENFKKFKALVEKES 459

Query: 195 GVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECVRFLL 374
           G+ +  +RSD G E+ S +F   C+  GI R +TVP SPQQNG+ ERKN+T++  VR +L
Sbjct: 460 GLSIKAMRSDRGGEFTSNKFNKYCEDHGIRRPLTVPRSPQQNGVAERKNRTILNMVRSML 519

Query: 375 DNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYFCLVP 554
            +  + K++W + +  + Y+TN  P  +   K P+E W   K  I +LK+FG   +  VP
Sbjct: 520 KSKKMPKEFWAEAVACAVYLTNRSPTRSVHEKTPQEAWSGRKPGISHLKVFGSIAYTHVP 579

Query: 555 KELRKKLDLKVRSDIFLGY 611
            E R KLD K    +F+GY
Sbjct: 580 DEKRTKLDDKSEKYVFVGY 598


>gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Japonica Group]
            gi|57863849|gb|AAW56890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1274

 Score =  169 bits (429), Expect = 4e-40
 Identities = 90/199 (45%), Positives = 125/199 (62%)
 Frame = +3

Query: 15   LELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV*NKK 194
            LEL+HSD+  +    +  G RYF++FIDD +R+ +VYLLK++DE  + FK Y+  V N+ 
Sbjct: 490  LELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQL 549

Query: 195  GVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECVRFLL 374
              K+  LRSD G E+ S EF   C++ GI  E+T PYSP+ NG+ ERKN+TL + V  +L
Sbjct: 550  DRKIKRLRSDHGGEFFSNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAML 609

Query: 375  DNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYFCLVP 554
            D AGL K WW + LLTSN++ N  PN N D K P E+W   K ++ YL+ +G      VP
Sbjct: 610  DTAGLPKAWWGEALLTSNHVLNRVPNRNKD-KTPYEIWIGRKPSLSYLRTWGCLAKVNVP 668

Query: 555  KELRKKLDLKVRSDIFLGY 611
               ++KL  K    +FLGY
Sbjct: 669  ITKKRKLGPKTVDCVFLGY 687


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  169 bits (429), Expect = 4e-40
 Identities = 87/203 (42%), Positives = 131/203 (64%)
 Frame = +3

Query: 3    TSRILELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV 182
            +  IL+LIHSD++  +P  S  G RYFVSFIDD+SR  +VY +K + +VF  FK ++  +
Sbjct: 478  SKHILDLIHSDVWE-SPEISLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQI 536

Query: 183  *NKKGVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECV 362
              +   K+ CLR+D G EY   EFLA C+++GI R+ TV ++PQQNG+ ER N+TL+E  
Sbjct: 537  ELETRKKIKCLRTDNGGEYIDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERT 596

Query: 363  RFLLDNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYF 542
            R +L  AG++K +W + + T+ Y+ N  P++  D+K P E+WK + ++   L +FG   +
Sbjct: 597  RAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVY 656

Query: 543  CLVPKELRKKLDLKVRSDIFLGY 611
             +   + R KLD K R  IFLGY
Sbjct: 657  VMYNSQERTKLDPKSRKCIFLGY 679


>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1287

 Score =  169 bits (429), Expect = 4e-40
 Identities = 90/199 (45%), Positives = 125/199 (62%)
 Frame = +3

Query: 15   LELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV*NKK 194
            LEL+HSD+  +    +  G RYF++FIDD +R+ +VYLLK++DE  + FK Y+  V N+ 
Sbjct: 451  LELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQL 510

Query: 195  GVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECVRFLL 374
              K+  LRSD G E+ S EF   C++ GI  E+T PYSP+ NG+ ERKN+TL + V  +L
Sbjct: 511  DRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAML 570

Query: 375  DNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYFCLVP 554
            D AGL K WW + LLTSN++ N  PN N D K P E+W   K ++ YL+ +G      VP
Sbjct: 571  DTAGLPKAWWGEALLTSNHVLNRVPNRNKD-KTPYEIWIGRKPSLSYLRTWGCLAKVNVP 629

Query: 555  KELRKKLDLKVRSDIFLGY 611
               ++KL  K    +FLGY
Sbjct: 630  ITKKRKLGPKTVDCVFLGY 648


>ref|XP_003376336.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trichinella spiralis] gi|316974954|gb|EFV58419.1|
           retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Trichinella spiralis]
          Length = 1003

 Score =  169 bits (428), Expect = 6e-40
 Identities = 90/203 (44%), Positives = 121/203 (59%)
 Frame = +3

Query: 3   TSRILELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV 182
           +  +LEL+HSDI G     S  G RYF+SFIDDFSR SFVY LK ++EV  KFK++  +V
Sbjct: 171 SKEVLELVHSDICGPMQVASVGGARYFLSFIDDFSRKSFVYFLKHKNEVLSKFKDFIAMV 230

Query: 183 *NKKGVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECV 362
             +   ++ CLR+D G EY +  F     +KGI  E T+P +PQQNG+ ER N+TL+E  
Sbjct: 231 ERQTSKRVKCLRTDNGREYVNNMFAEFLVRKGIRHERTIPETPQQNGVAERMNRTLVEKA 290

Query: 363 RFLLDNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYF 542
           R +L +A LS   W + + T+NY+ N  P        P+E W   K N+ +LK+FG    
Sbjct: 291 RTMLIDANLSPDLWAEAVGTANYLRNRCPTKALRKVTPEEAWSGRKPNLAHLKVFGCLAM 350

Query: 543 CLVPKELRKKLDLKVRSDIFLGY 611
             VP   RKK DLK    IF+GY
Sbjct: 351 VHVPSGQRKKWDLKSEERIFVGY 373


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  169 bits (428), Expect = 6e-40
 Identities = 85/200 (42%), Positives = 131/200 (65%)
 Frame = +3

Query: 12   ILELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV*NK 191
            +L+ IH+D++G + T S  G RYFVSFIDDFSR  +++ +K+++EVF KFKE++  V N+
Sbjct: 452  VLDYIHTDVWGPSATISKGGARYFVSFIDDFSRKVWIFFMKTKNEVFTKFKEWKAEVGNQ 511

Query: 192  KGVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECVRFL 371
             G K+ CLRSD G EY+  +FL  C+ +GITR  TV  SPQQNG+ ER N+TLME  R +
Sbjct: 512  TGRKIKCLRSDNGGEYRDKKFLQLCKDEGITRHFTVKKSPQQNGVAERMNRTLMEKERSM 571

Query: 372  LDNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYFCLV 551
              +AGL +++W +    + Y+ N  P+   + K  +EVW  + ++   L++FG   +  +
Sbjct: 572  RFHAGLPEEFWAEAANHACYLINRSPSRAINFKCAEEVWSGKPVDYSNLRVFGCSAYAHI 631

Query: 552  PKELRKKLDLKVRSDIFLGY 611
            PK+ R KL+ K    +F+G+
Sbjct: 632  PKDERTKLEPKSLECLFIGF 651


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  169 bits (428), Expect = 6e-40
 Identities = 84/201 (41%), Positives = 126/201 (62%)
 Frame = +3

Query: 9    RILELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV*N 188
            ++LEL+H+DI G   T S   ++YFV FIDDF+R ++V+ +K + EVF  FK+++  V  
Sbjct: 590  KVLELVHTDICGPMSTPSQGNNKYFVLFIDDFTRMTWVFFMKQKSEVFSIFKKFKSFVEK 649

Query: 189  KKGVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECVRF 368
            + G  +  LRSD G+EY S++F   C+ +G+ R++TV Y+PQQNG+VERKNQT+ME  + 
Sbjct: 650  QSGCYIKTLRSDRGMEYTSSQFGNFCEDEGVERQLTVAYTPQQNGVVERKNQTVMEMAKA 709

Query: 369  LLDNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYFCL 548
            +L   GL K +W + + T+ Y+ N  P      K P E W   K ++ + K+FG   +  
Sbjct: 710  MLYEKGLPKIFWAEAVNTAVYLLNRCPTKALLNKTPIEAWSGRKPSVRHFKVFGCLCYSQ 769

Query: 549  VPKELRKKLDLKVRSDIFLGY 611
            VPK+ R KLD      IF+GY
Sbjct: 770  VPKQRRSKLDETSEKCIFMGY 790


>gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1289

 Score =  168 bits (426), Expect = 1e-39
 Identities = 90/199 (45%), Positives = 124/199 (62%)
 Frame = +3

Query: 15   LELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV*NKK 194
            LEL+HSD+  +    +  G RYF++FIDD +R+ +VYLLK++DE  + FK Y+  V N+ 
Sbjct: 490  LELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQL 549

Query: 195  GVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECVRFLL 374
              K+  LRSD G E+ S EF   C++ GI  E T PYSP+ NG+ ERKN+TL + V  +L
Sbjct: 550  DRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAML 609

Query: 375  DNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYFCLVP 554
            D AGL K WW + LLTSN++ N  PN N D K P E+W   K ++ YL+ +G      VP
Sbjct: 610  DTAGLPKAWWGEALLTSNHVLNRVPNRNKD-KTPYEIWIDRKPSLSYLRTWGCLAKVNVP 668

Query: 555  KELRKKLDLKVRSDIFLGY 611
               ++KL  K    +FLGY
Sbjct: 669  ITKKRKLGPKTVDCVFLGY 687


>gb|ABA94191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1060

 Score =  168 bits (425), Expect = 1e-39
 Identities = 90/199 (45%), Positives = 124/199 (62%)
 Frame = +3

Query: 15  LELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV*NKK 194
           LEL+HSD+  +    +  G RYF++FIDD +R+ +VYLLK++DE  + FK Y+  V N+ 
Sbjct: 358 LELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQL 417

Query: 195 GVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECVRFLL 374
             K+  LRSD G E+ S EF   C++ GI  E T PYSP+ NG+ ERKN+TL + V  +L
Sbjct: 418 DRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAML 477

Query: 375 DNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYFCLVP 554
           D AGL K WW + LLTSN++ N  PN N D K P E+W   K ++ YL+ +G      VP
Sbjct: 478 DTAGLPKAWWGEALLTSNHVLNRVPNRNKD-KTPYEIWIGRKPSLSYLRTWGCLAKVNVP 536

Query: 555 KELRKKLDLKVRSDIFLGY 611
              ++KL  K    +FLGY
Sbjct: 537 ITKKRKLGPKTVDCVFLGY 555


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  168 bits (425), Expect = 1e-39
 Identities = 86/203 (42%), Positives = 130/203 (64%)
 Frame = +3

Query: 3    TSRILELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV 182
            +  IL+LIHSD++  +P  S  G RYFVSFIDD+SR  +VY +K + +VF  FK ++  +
Sbjct: 478  SKHILDLIHSDVWE-SPEISLGGARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQI 536

Query: 183  *NKKGVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECV 362
              +   K+ CLR+D G EY   EFLA C+++GI R+ TV ++PQQNG+ ER N+TL+E  
Sbjct: 537  ELETEKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERT 596

Query: 363  RFLLDNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYF 542
            R +L  AG++K +W +   T+ Y+ N  P++  D+K P E+WK + ++   L +FG   +
Sbjct: 597  RAMLKTAGMAKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVY 656

Query: 543  CLVPKELRKKLDLKVRSDIFLGY 611
             +   + + KLD K R  IFLGY
Sbjct: 657  VMYNSQEKTKLDPKSRKCIFLGY 679


>emb|CAN83869.1| hypothetical protein VITISV_037705 [Vitis vinifera]
          Length = 901

 Score =  167 bits (424), Expect = 2e-39
 Identities = 81/199 (40%), Positives = 125/199 (62%)
 Frame = +3

Query: 15  LELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV*NKK 194
           LEL+H+D++G +P  S  G RY+++FIDD SR  +VY LK++ +VFE FK+++ +V  + 
Sbjct: 330 LELVHTDLWGPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFETFKKWKAMVETET 389

Query: 195 GVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECVRFLL 374
            +K+ CLRSD G EY    F   C  +GI  E T+P +PQQNG+ ER N TL E  R + 
Sbjct: 390 XLKVKCLRSDNGGEYIDXGFSEYCAAQGIRMEKTIPXTPQQNGVAERMNXTLNEXARSMR 449

Query: 375 DNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYFCLVP 554
            +AGL K +W D + T+ Y+ N  P+   + ++P+EVW  +++   +LK+FG   +  + 
Sbjct: 450 LHAGLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHID 509

Query: 555 KELRKKLDLKVRSDIFLGY 611
            + R KLD K +   F+GY
Sbjct: 510 SDARSKLDAKSKICFFIGY 528


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  167 bits (423), Expect = 2e-39
 Identities = 89/200 (44%), Positives = 128/200 (64%)
 Frame = +3

Query: 12   ILELIHSDIFGLTPTQSYQGHRYFVSFIDDFSRYSFVYLLKSRDEVFEKFKEYRKLV*NK 191
            IL+L++SD+ G    +S  G++YFV+FIDD SR  +VY+LK++D+VF+ F+++  LV  +
Sbjct: 480  ILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERE 539

Query: 192  KGVKLACLRSDGGLEYKSTEFLANCQKKGITREITVPYSPQQNGLVERKNQTLMECVRFL 371
             G KL  LRSD G EY S EF   C   GI  E TVP +PQ NG+ ER N+T++E VR +
Sbjct: 540  TGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSM 599

Query: 372  LDNAGLSKKWWEDGLLTSNYITNYWPNSNNDMKIPKEVWKKEKINI*YLKIFGDEYFCLV 551
            L  A L K +W + + T+ Y+ N  P+     +IP+ VW  ++++  +LK+FG   F  V
Sbjct: 600  LRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHV 659

Query: 552  PKELRKKLDLKVRSDIFLGY 611
            PKE R KLD K    IF+GY
Sbjct: 660  PKEQRTKLDDKSIPCIFIGY 679