BLASTX nr result
ID: Ephedra25_contig00011070
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00011070
(2128 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK25455.1| unknown [Picea sitchensis] 610 0.0
ref|XP_002462723.1| hypothetical protein SORBIDRAFT_02g030910 [S... 506 e-165
ref|XP_002449727.1| hypothetical protein SORBIDRAFT_05g022200 [S... 503 e-147
gb|EOY19345.1| Replication factor C subunit 1 [Theobroma cacao] 518 e-144
ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li... 518 e-144
emb|CBI24290.3| unnamed protein product [Vitis vinifera] 518 e-144
ref|XP_004979519.1| PREDICTED: replication factor C subunit 1-li... 508 e-141
gb|EMJ00202.1| hypothetical protein PRUPE_ppa000922mg [Prunus pe... 506 e-140
ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis ... 506 e-140
ref|XP_006400706.1| hypothetical protein EUTSA_v10012587mg [Eutr... 506 e-140
dbj|BAJ33988.1| unnamed protein product [Thellungiella halophila] 506 e-140
ref|XP_001777721.1| predicted protein [Physcomitrella patens] gi... 505 e-140
ref|XP_006287008.1| hypothetical protein CARUB_v10000156mg [Caps... 505 e-140
gb|ESW04506.1| hypothetical protein PHAVU_011G100500g [Phaseolus... 504 e-140
ref|XP_004506246.1| PREDICTED: replication factor C subunit 1-li... 504 e-140
ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-li... 504 e-140
ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-li... 504 e-140
ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana] gi... 504 e-140
emb|CAC86668.1| replication factor C large subunit [Triticum sp.] 503 e-139
ref|XP_006663537.1| PREDICTED: replication factor C subunit 1-li... 502 e-139
>gb|ABK25455.1| unknown [Picea sitchensis]
Length = 550
Score = 610 bits (1574), Expect(2) = 0.0
Identities = 318/423 (75%), Positives = 355/423 (83%), Gaps = 3/423 (0%)
Frame = -3
Query: 1310 NATIHRG-LTNGGK--KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQ 1140
N ++ RG +G K KSVLIMDEVDGMSGGDRGGVSDL CNDRY+Q
Sbjct: 121 NESLSRGSFMDGSKRGKSVLIMDEVDGMSGGDRGGVSDLIASIKISKIPIICICNDRYNQ 180
Query: 1139 KLKSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQL 960
KLKSL+N CLPLNFRKPTKQQMAKRL QVAELEG+KVDEAAL ELGERVNGDMRMALNQL
Sbjct: 181 KLKSLVNYCLPLNFRKPTKQQMAKRLCQVAELEGLKVDEAALLELGERVNGDMRMALNQL 240
Query: 959 QYMSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDL 780
QYMSLS S +KYADIK+RL+ KDEDITPFTA +KLLG E RLRMDE+MDL MSDPDL
Sbjct: 241 QYMSLSSSILKYADIKARLQGSKKDEDITPFTAVDKLLGYEGGRLRMDERMDLSMSDPDL 300
Query: 779 VPLLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGA 600
VPLLIQENYLNYKP+AA RD DGS RMDLI+RAA+SIADGDIIN QIRRY+QWQHSQMGA
Sbjct: 301 VPLLIQENYLNYKPSAASRDGDGSLRMDLIARAAESIADGDIINVQIRRYRQWQHSQMGA 360
Query: 599 FASSIIPSAFIHGYRETFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACEL 420
FASSIIP+AF+HG RE VQGE+NFNRFG WLGKNST GKN RLL DVHVH LAS CE
Sbjct: 361 FASSIIPAAFMHGPREVLVQGERNFNRFGGWLGKNSTLGKNNRLLEDVHVHFLASGTCEP 420
Query: 419 SRENLRLDYLSVLLTRLTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHL 240
+R LRLDYL +L+ +LT PL+TLPK+EAVQ V++FM+EYSL+QEDFDTIVELSKFQGH
Sbjct: 421 TRGALRLDYLPLLVLQLTRPLQTLPKEEAVQTVVEFMNEYSLNQEDFDTIVELSKFQGHP 480
Query: 239 DPLKSIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDEGE 60
DPL I PAVKAALTK YKQNE+S RVR++DL+PA+ +PGQKK PK+KRVA LL T + E
Sbjct: 481 DPLDGIQPAVKAALTKAYKQNEKSHRVRSSDLLPAILLPGQKKTPKSKRVASLLATVD-E 539
Query: 59 FPL 51
+PL
Sbjct: 540 YPL 542
Score = 121 bits (304), Expect(2) = 0.0
Identities = 55/81 (67%), Positives = 69/81 (85%)
Frame = -1
Query: 1609 MWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAGNKSSNTSK 1430
MWTEKYRPKTP+DI+GNQ+IVK +H+WLA+W+ +HL+T K KG KR G G+ SSN SK
Sbjct: 1 MWTEKYRPKTPDDIIGNQSIVKNIHDWLAHWDEQHLHTEGKESKGKKR-GGGSVSSNASK 59
Query: 1429 KAVIMSGPPGIGKTTAARLVS 1367
KAV++SG PGIGKTT+ARL+S
Sbjct: 60 KAVLLSGTPGIGKTTSARLIS 80
>ref|XP_002462723.1| hypothetical protein SORBIDRAFT_02g030910 [Sorghum bicolor]
gi|241926100|gb|EER99244.1| hypothetical protein
SORBIDRAFT_02g030910 [Sorghum bicolor]
Length = 1025
Score = 506 bits (1302), Expect(2) = e-165
Identities = 266/421 (63%), Positives = 313/421 (74%), Gaps = 2/421 (0%)
Frame = -3
Query: 1310 NATIHRGLTNGGK--KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQK 1137
NAT++ G N K K+VLIMDEVDGMS GDRGGV+DL CNDRYSQK
Sbjct: 524 NATLNYG-DNRSKHPKAVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQK 582
Query: 1136 LKSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQ 957
LKSL+N CL LNFRKPTKQQM KRL ++A+ EGI+ E A+EEL ERV+GD+RMALN LQ
Sbjct: 583 LKSLVNYCLMLNFRKPTKQQMGKRLMEIAKKEGIQAQENAMEELAERVHGDIRMALNHLQ 642
Query: 956 YMSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLV 777
YMSLS S +KY DI+ RL KDEDI+PFTA +KL G RLRMDE++D MSDPDLV
Sbjct: 643 YMSLSQSVVKYDDIRERLNSSSKDEDISPFTAVDKLFGFNGGRLRMDERIDFGMSDPDLV 702
Query: 776 PLLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAF 597
PL+IQENY+NY+PN G+D G +RM+ ++RAA+SIADGD++N QIRRY+QWQ SQ F
Sbjct: 703 PLIIQENYINYRPNTLGKDESGVKRMNALARAAESIADGDLVNVQIRRYRQWQLSQAACF 762
Query: 596 ASSIIPSAFIHGYRETFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELS 417
ASSI+P+A++HG RE GE+NFNRFG WLGK ST KN RLL DVH HILAS L
Sbjct: 763 ASSIVPAAWMHGNREVLEAGERNFNRFGGWLGKYSTTNKNRRLLEDVHSHILASQQANLD 822
Query: 416 RENLRLDYLSVLLTRLTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLD 237
RE LRLDYL+++L LT+PLK +PKDEAVQ V++FMD YSLSQEDFDTIVE+SKF+GH
Sbjct: 823 REALRLDYLTLILRELTDPLKKMPKDEAVQKVVEFMDTYSLSQEDFDTIVEVSKFKGHPS 882
Query: 236 PLKSIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDEGEF 57
P+ I PAVK+ALTK YKQ SR VR ADLI IPG KK P KRVA +L E
Sbjct: 883 PMDGIQPAVKSALTKAYKQGSSSRVVRAADLI---NIPGMKK-PLKKRVAAILEPLEESV 938
Query: 56 P 54
P
Sbjct: 939 P 939
Score = 104 bits (259), Expect(2) = e-165
Identities = 53/108 (49%), Positives = 75/108 (69%), Gaps = 8/108 (7%)
Frame = -1
Query: 1666 RSVQYNSNKALQTSKAE--------TAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWEN 1511
+S+ NSN A ++ + + WTEKYRPK PNDIVGNQ++VKQLH+WL +W+
Sbjct: 383 KSIASNSNAASASADKQKPKNVDRGSMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDA 442
Query: 1510 EHLNTGEKGKKGNKRTGAGNKSSNTSKKAVIMSGPPGIGKTTAARLVS 1367
L++G+KG KG K ++ + +KKAV++SGPPGIGKTT A++VS
Sbjct: 443 LFLHSGQKG-KGKK------QADSAAKKAVLLSGPPGIGKTTTAKVVS 483
>ref|XP_002449727.1| hypothetical protein SORBIDRAFT_05g022200 [Sorghum bicolor]
gi|241935570|gb|EES08715.1| hypothetical protein
SORBIDRAFT_05g022200 [Sorghum bicolor]
Length = 946
Score = 503 bits (1295), Expect(2) = e-147
Identities = 265/421 (62%), Positives = 312/421 (74%), Gaps = 2/421 (0%)
Frame = -3
Query: 1310 NATIHRGLTNGGK--KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQK 1137
NAT++ G N K K+VLIMDEVDGMS GDRGGV+DL CNDRYSQK
Sbjct: 446 NATLNYG-DNRSKHPKAVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQK 504
Query: 1136 LKSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQ 957
LKSL+N CL LNFRKPTKQQM KRL ++A+ EGI+ E A+EEL ERV+GD+RMALN LQ
Sbjct: 505 LKSLVNYCLMLNFRKPTKQQMGKRLMEIAKKEGIQAQENAMEELAERVHGDIRMALNHLQ 564
Query: 956 YMSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLV 777
YMSLS S +KY DI+ RL KDEDI+PFTA +KL G RLRMDE++D MSDPDLV
Sbjct: 565 YMSLSQSVVKYDDIRERLNSSSKDEDISPFTAVDKLFGFNGGRLRMDERIDFGMSDPDLV 624
Query: 776 PLLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAF 597
PL+IQENY+NY+PN G+D G +RM+ ++RAA+SIADGD++N QIRRY+QWQ SQ F
Sbjct: 625 PLIIQENYINYRPNTIGKDESGVKRMNALARAAESIADGDLVNVQIRRYRQWQLSQAACF 684
Query: 596 ASSIIPSAFIHGYRETFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELS 417
ASSI+P+A++HG RE GE+NFNRFG WLGK ST KN RLL DVH HILAS L
Sbjct: 685 ASSIVPAAWMHGNREILEAGERNFNRFGGWLGKYSTTNKNRRLLEDVHSHILASQQANLD 744
Query: 416 RENLRLDYLSVLLTRLTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLD 237
RE LRLDYL+++L LT+PLK + KDEAVQ V++FMD YSLSQEDFDTIVE+SKF+GH
Sbjct: 745 REALRLDYLTLILRELTDPLKKMSKDEAVQKVVEFMDTYSLSQEDFDTIVEVSKFKGHPS 804
Query: 236 PLKSIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDEGEF 57
P+ I PAVK+ALTK YKQ SR VR ADLI IPG KK P KRVA +L E
Sbjct: 805 PMDGIQPAVKSALTKAYKQGSSSRVVRAADLI---NIPGMKK-PLKKRVAAILEPVEESL 860
Query: 56 P 54
P
Sbjct: 861 P 861
Score = 48.1 bits (113), Expect(2) = e-147
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = -1
Query: 1666 RSVQYNSNKALQTSKAE--------TAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWEN 1511
+S+ NSN A ++ + + WTEKYRPK PNDIVGNQ++V
Sbjct: 368 KSIASNSNAASASADKQKPKNVDRGSMQWTEKYRPKVPNDIVGNQSMVNA---------- 417
Query: 1510 EHLNTGEKGKKGNK-RTGAGNKSSNTSKKAV 1421
+ +GK +K G G +SN+ K+ +
Sbjct: 418 ----SDSRGKADSKIEKGVGGSTSNSIKELI 444
>gb|EOY19345.1| Replication factor C subunit 1 [Theobroma cacao]
Length = 1012
Score = 518 bits (1335), Expect = e-144
Identities = 263/402 (65%), Positives = 317/402 (78%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
K+VLIMDEVDGMS GDRGG++DL CNDRYSQKLKSL+N CL L+FRK
Sbjct: 467 KTVLIMDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRK 526
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQMAKRL QVA EG++V+E AL+EL ERVNGDMRMALNQLQYMSLS S IKY DI+
Sbjct: 527 PTKQQMAKRLMQVANAEGLQVNEIALQELAERVNGDMRMALNQLQYMSLSMSVIKYDDIR 586
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
RL G KDEDI+PFTA +KL G+ +LRMD+++DL MSDPDLVPLLIQENY+NY+P++
Sbjct: 587 QRLLSGSKDEDISPFTAVDKLFGIYGGKLRMDQRIDLSMSDPDLVPLLIQENYINYRPSS 646
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
G+D G +RM+LI++AA+SI DGDIIN QIRRY+QWQ SQ G+ +S IIP+A +HG RE
Sbjct: 647 IGKDDSGMKRMNLIAQAAESIGDGDIINVQIRRYRQWQLSQAGSLSSCIIPAALLHGQRE 706
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
T QGE+NFNRFG WLGKNST KN RLL D+HVHILAS RE LRLDYL+VLLT+
Sbjct: 707 TLEQGERNFNRFGGWLGKNSTMSKNYRLLEDLHVHILASRESSSGRETLRLDYLTVLLTQ 766
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LTNPL+ PKDEAV+ V++FM+ YS+SQEDFDT+VELSKFQG +PL+ IP AVKAALTK
Sbjct: 767 LTNPLRDKPKDEAVKQVVEFMNAYSISQEDFDTVVELSKFQGQSNPLEGIPAAVKAALTK 826
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDE 66
Y + +++ VR ADL+ +PG KKAPK KR+A +L +
Sbjct: 827 AYNEGSKTQMVRAADLV---TLPGMKKAPK-KRIAAILEPSD 864
Score = 100 bits (250), Expect = 2e-18
Identities = 56/115 (48%), Positives = 71/115 (61%), Gaps = 11/115 (9%)
Frame = -1
Query: 1678 KMNERSVQYNSNKALQTSKAETAM-----------WTEKYRPKTPNDIVGNQTIVKQLHE 1532
K N S + S K+L TS + T WTEKYRPK PN++ GNQ++V QLH
Sbjct: 306 KSNSSSAKI-SGKSLTTSVSSTKQRGQPIQHSSLTWTEKYRPKVPNEMTGNQSLVNQLHN 364
Query: 1531 WLANWENEHLNTGEKGKKGNKRTGAGNKSSNTSKKAVIMSGPPGIGKTTAARLVS 1367
WLA+W + L TG KG KG K+ G +KKAV++SG PGIGKTT+A+LVS
Sbjct: 365 WLAHWNEQFLGTGSKG-KGKKQNDPG------AKKAVLLSGTPGIGKTTSAKLVS 412
>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
Length = 933
Score = 518 bits (1335), Expect = e-144
Identities = 267/404 (66%), Positives = 313/404 (77%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
K+VLIMDEVDGMS GDRGGV+DL CNDRYSQKLKSL+N CL L+FRK
Sbjct: 443 KTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRK 502
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQMAKRL QVA EG++V+E ALEEL ERVNGDMRMALNQLQYMSLS S IKY D++
Sbjct: 503 PTKQQMAKRLLQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDVR 562
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
RL KDEDI+PF A +KL G +LRMDE++DL MSDPDLVPLLIQENY+NY+P
Sbjct: 563 QRLLSSAKDEDISPFVAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPTL 622
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
AG+D +G +RM L++RAA+SI DGDIIN QIRRY+QWQ SQ G+FAS I P+A +HG RE
Sbjct: 623 AGKDDNGVKRMSLLARAAESIGDGDIINVQIRRYRQWQLSQAGSFASCITPAALLHGQRE 682
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
T QGE+NFNRFG WLGKNST GKN RLL D+HVH+LAS R LR+DYL+++L R
Sbjct: 683 TLEQGERNFNRFGGWLGKNSTMGKNKRLLEDLHVHLLASRESNSGRGTLRIDYLTLILKR 742
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LT+PL+ LPKD+AVQ V++FMD YS+SQEDFDTIVELSKFQGH PL+ I PAVK+ALTK
Sbjct: 743 LTDPLRMLPKDDAVQKVVEFMDLYSISQEDFDTIVELSKFQGHPSPLEGIQPAVKSALTK 802
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDEGE 60
Y + SR VR ADLI +PG KKAPK KR+A +L + E
Sbjct: 803 AYNKGSSSRLVRAADLI---TLPGIKKAPK-KRIAAILEPVDDE 842
Score = 107 bits (267), Expect = 2e-20
Identities = 52/89 (58%), Positives = 67/89 (75%)
Frame = -1
Query: 1633 QTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAG 1454
QT + WTEKY+PK PNDI+GNQ++VKQLHEWLA+W + L+TG KG KG K+ +G
Sbjct: 307 QTIGHASLTWTEKYKPKVPNDIIGNQSLVKQLHEWLAHWNEQFLHTGTKG-KGKKQNDSG 365
Query: 1453 NKSSNTSKKAVIMSGPPGIGKTTAARLVS 1367
+KKAV++SG PGIGKTT+A+LVS
Sbjct: 366 ------AKKAVLLSGTPGIGKTTSAKLVS 388
>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
Length = 941
Score = 518 bits (1335), Expect = e-144
Identities = 267/404 (66%), Positives = 313/404 (77%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
K+VLIMDEVDGMS GDRGGV+DL CNDRYSQKLKSL+N CL L+FRK
Sbjct: 451 KTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRK 510
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQMAKRL QVA EG++V+E ALEEL ERVNGDMRMALNQLQYMSLS S IKY D++
Sbjct: 511 PTKQQMAKRLLQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDVR 570
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
RL KDEDI+PF A +KL G +LRMDE++DL MSDPDLVPLLIQENY+NY+P
Sbjct: 571 QRLLSSAKDEDISPFVAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPTL 630
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
AG+D +G +RM L++RAA+SI DGDIIN QIRRY+QWQ SQ G+FAS I P+A +HG RE
Sbjct: 631 AGKDDNGVKRMSLLARAAESIGDGDIINVQIRRYRQWQLSQAGSFASCITPAALLHGQRE 690
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
T QGE+NFNRFG WLGKNST GKN RLL D+HVH+LAS R LR+DYL+++L R
Sbjct: 691 TLEQGERNFNRFGGWLGKNSTMGKNKRLLEDLHVHLLASRESNSGRGTLRIDYLTLILKR 750
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LT+PL+ LPKD+AVQ V++FMD YS+SQEDFDTIVELSKFQGH PL+ I PAVK+ALTK
Sbjct: 751 LTDPLRMLPKDDAVQKVVEFMDLYSISQEDFDTIVELSKFQGHPSPLEGIQPAVKSALTK 810
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDEGE 60
Y + SR VR ADLI +PG KKAPK KR+A +L + E
Sbjct: 811 AYNKGSSSRLVRAADLI---TLPGIKKAPK-KRIAAILEPVDDE 850
Score = 107 bits (267), Expect = 2e-20
Identities = 52/89 (58%), Positives = 67/89 (75%)
Frame = -1
Query: 1633 QTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAG 1454
QT + WTEKY+PK PNDI+GNQ++VKQLHEWLA+W + L+TG KG KG K+ +G
Sbjct: 315 QTIGHASLTWTEKYKPKVPNDIIGNQSLVKQLHEWLAHWNEQFLHTGTKG-KGKKQNDSG 373
Query: 1453 NKSSNTSKKAVIMSGPPGIGKTTAARLVS 1367
+KKAV++SG PGIGKTT+A+LVS
Sbjct: 374 ------AKKAVLLSGTPGIGKTTSAKLVS 396
>ref|XP_004979519.1| PREDICTED: replication factor C subunit 1-like [Setaria italica]
Length = 989
Score = 508 bits (1307), Expect = e-141
Identities = 261/402 (64%), Positives = 306/402 (76%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
K+VLIMDEVDGMS GDRGGV+DL CNDRYSQKLKSL+N CL LNFRK
Sbjct: 502 KAVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLMLNFRK 561
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQM+KRL ++A+ EGI+ E A+EEL ERV+GD+RMALN LQYMSLS S +KY DI+
Sbjct: 562 PTKQQMSKRLMEIAKKEGIQAQENAMEELAERVHGDIRMALNHLQYMSLSQSVVKYDDIR 621
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
RL KDEDI+PFTA +KL G RLRMDE++D MSDPDLVPL+IQENY+NY+PN
Sbjct: 622 ERLNSSAKDEDISPFTAVDKLFGFNGGRLRMDERIDFGMSDPDLVPLIIQENYINYRPNT 681
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
G+D G +RM+ ++RAA+SIADGD++N QIRRY+QWQ SQ FASSI+P+AF+HG RE
Sbjct: 682 IGKDESGVKRMNALARAAESIADGDLVNVQIRRYRQWQLSQAACFASSIVPAAFMHGNRE 741
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
GE+NFNRFG WLGK ST KN RLL D H HILAS L RE LRLDYL++LL +
Sbjct: 742 ILEAGERNFNRFGGWLGKYSTTNKNRRLLEDAHSHILASQQANLDRETLRLDYLTLLLRQ 801
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LT+PLKT+PKDEAVQ V++FMD YSLSQEDFDTIVE+SKF+GH P+ I PAVK+ALTK
Sbjct: 802 LTDPLKTMPKDEAVQKVVEFMDTYSLSQEDFDTIVEISKFKGHPSPMDGIQPAVKSALTK 861
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDE 66
YKQ SR VR ADLI IPG KK P KRVA +L E
Sbjct: 862 AYKQGSSSRVVRAADLI---NIPGMKK-PLKKRVAAILEPVE 899
Score = 107 bits (267), Expect = 2e-20
Identities = 53/104 (50%), Positives = 73/104 (70%)
Frame = -1
Query: 1678 KMNERSVQYNSNKALQTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLN 1499
K N + + KA + + WTEKYRPK PNDIVGNQ++VKQLH+WL +W+ + L+
Sbjct: 352 KSNVANASAENRKAKNIDRG-SMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDTQFLH 410
Query: 1498 TGEKGKKGNKRTGAGNKSSNTSKKAVIMSGPPGIGKTTAARLVS 1367
+G+KG KG K ++ N +KKAV++SGPPGIGKTT A++VS
Sbjct: 411 SGQKG-KGKK------QADNGAKKAVLLSGPPGIGKTTTAKVVS 447
>gb|EMJ00202.1| hypothetical protein PRUPE_ppa000922mg [Prunus persica]
Length = 961
Score = 506 bits (1304), Expect = e-140
Identities = 258/398 (64%), Positives = 310/398 (77%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
K+VLIMDEVDGMS GDRGGV+DL CNDRYSQKLKSL+N CL L+FRK
Sbjct: 472 KTVLIMDEVDGMSAGDRGGVADLIASIKISKIPVICICNDRYSQKLKSLVNYCLLLSFRK 531
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQMAKRL Q+A EG+KV+E ALEEL E+VNGDMRMA+NQLQYMSLS S IKY D++
Sbjct: 532 PTKQQMAKRLMQIANAEGLKVNEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVR 591
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
RL KDEDI+PFTA +KL G + +LRMDE++DL MSDPDLVPLLIQENY+NY+P++
Sbjct: 592 QRLLSSAKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSS 651
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
A +D G +RM+LI+ AA+SI +GDI N QIR+Y+QWQ SQ +SSI P+A + G RE
Sbjct: 652 AVKDDSGIKRMNLIAHAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIFPAALLRGQRE 711
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
T QGE+NFNRFG WLGKNST GKN+RLL D+HVH+LAS RE LR++YLS+LL R
Sbjct: 712 TLEQGERNFNRFGGWLGKNSTLGKNSRLLEDLHVHLLASRESSSGRETLRVEYLSLLLKR 771
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LT PL+ LPKDEAV V+DFM+ YS+SQ+DFDTIVELSKFQGH +PL I PAVKAALTK
Sbjct: 772 LTVPLRELPKDEAVHKVVDFMNTYSISQDDFDTIVELSKFQGHPNPLDGIQPAVKAALTK 831
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLL 78
YK+ ++R VR AD + +PG KKAPK KR+A +L
Sbjct: 832 AYKEGSKTRMVRAADFV---TLPGMKKAPK-KRIAAIL 865
Score = 105 bits (263), Expect = 6e-20
Identities = 49/95 (51%), Positives = 71/95 (74%)
Frame = -1
Query: 1651 NSNKALQTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGN 1472
++ + Q ++ + WTEKYRPK PNDI+GNQ++VKQLH+WL +W + L+TG K KKG
Sbjct: 332 HARRKKQPTEHSASTWTEKYRPKVPNDIIGNQSLVKQLHDWLVHWHEQFLDTGNK-KKGK 390
Query: 1471 KRTGAGNKSSNTSKKAVIMSGPPGIGKTTAARLVS 1367
N +++++KKAV++SG PGIGKTT+A+LVS
Sbjct: 391 ------NPTNSSAKKAVLLSGTPGIGKTTSAKLVS 419
>ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319877|gb|EFH50299.1| AAA-type ATPase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 960
Score = 506 bits (1304), Expect = e-140
Identities = 258/398 (64%), Positives = 313/398 (78%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
K+VLIMDEVDGMS GDRGGV+DL CNDRYSQKLKSL+N CLPLN+RK
Sbjct: 473 KTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNYRK 532
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQMAKRL +A+ EG++++E ALEEL ERVNGD+R+ALNQLQYMSLS SAIKY DI+
Sbjct: 533 PTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLALNQLQYMSLSMSAIKYDDIR 592
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
RL KDEDI+PFTA +KL G +LRMDE++DL MSDPDLVPLLIQENYLNY+P+
Sbjct: 593 QRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYLNYRPSG 652
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
D ++RMDL++ AA+SIADGDIIN QIRRY+QWQ SQ ASSI+P++ +HG RE
Sbjct: 653 K----DEAKRMDLLALAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASLLHGSRE 708
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
QGE+NFNRFG WLGKNST GKN RL+ D+HVH+LAS RE LR+DYLS+LL+R
Sbjct: 709 VLEQGERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSAGRETLRVDYLSLLLSR 768
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LT+PL+TLPKDEAV V+DFM+ YS+SQEDFDTI+EL KF+G +PL+ +PP VKAALTK
Sbjct: 769 LTSPLQTLPKDEAVSEVVDFMNSYSISQEDFDTIMELGKFKGRENPLEGVPPPVKAALTK 828
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLL 78
Y + ++R VR AD++ Q+PG KKAPK KR+A +L
Sbjct: 829 KYNEMNKTRMVRVADMV---QLPGVKKAPK-KRIAAML 862
Score = 99.0 bits (245), Expect = 7e-18
Identities = 50/85 (58%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = -1
Query: 1618 ETAM-WTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAGNKSS 1442
ET++ WTEKYRPK PN+IVGNQ++V QLH WL++W ++ TG KG KG K AG
Sbjct: 341 ETSLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKG-KGKKLNDAG---- 395
Query: 1441 NTSKKAVIMSGPPGIGKTTAARLVS 1367
+KKAV++SG PGIGKTT+A+LVS
Sbjct: 396 --AKKAVLLSGTPGIGKTTSAKLVS 418
>ref|XP_006400706.1| hypothetical protein EUTSA_v10012587mg [Eutrema salsugineum]
gi|557101796|gb|ESQ42159.1| hypothetical protein
EUTSA_v10012587mg [Eutrema salsugineum]
Length = 962
Score = 506 bits (1302), Expect = e-140
Identities = 255/398 (64%), Positives = 315/398 (79%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
K+VLIMDEVDGMS GDRGGV+DL CNDRYSQKLKSL+N CLPLNFRK
Sbjct: 475 KTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNFRK 534
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQMAKRL +A+ EG++V+E ALEEL ERVNGD+R+ALNQLQYMSLS S IKY DI+
Sbjct: 535 PTKQQMAKRLTHIAKAEGLEVNEIALEELAERVNGDIRLALNQLQYMSLSMSVIKYDDIR 594
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
RL KDEDI+PFTA +KL G +LRMDE++DL MSD DLVPLL+QENYLNY+P++
Sbjct: 595 QRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDFDLVPLLVQENYLNYRPSS 654
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
G+D ++RM+L++RAA+SIADGDIIN QIRR++QWQ S ASSI+P++ +HG RE
Sbjct: 655 TGKDE--AKRMELLARAAESIADGDIINVQIRRHRQWQLSLSSCVASSILPASLLHGSRE 712
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
QGE+NFNRFG WLGKNST GKNTRLL D+HVH+LAS RE +R+DYL +LL R
Sbjct: 713 VLEQGERNFNRFGGWLGKNSTAGKNTRLLEDLHVHVLASRESSSGRETIRVDYLPLLLNR 772
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LT+PL+TLPKDEAV V++FM+ YS+SQEDFDTI+EL+KF+G +PL+ +PPAVK+ALTK
Sbjct: 773 LTSPLQTLPKDEAVSEVVEFMNSYSISQEDFDTIMELAKFKGRANPLEGVPPAVKSALTK 832
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLL 78
Y + ++R VR AD++ Q+PG KKAPK KR+A +L
Sbjct: 833 KYNETNKTRMVRAADMV---QLPGMKKAPK-KRIAAML 866
Score = 100 bits (249), Expect = 3e-18
Identities = 53/92 (57%), Positives = 65/92 (70%)
Frame = -1
Query: 1642 KALQTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRT 1463
K +QTS WTEKYRPK PN+IVGNQ++V QLH WL++W ++ TG KG KG K
Sbjct: 340 KIIQTSLP----WTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKG-KGKKLN 394
Query: 1462 GAGNKSSNTSKKAVIMSGPPGIGKTTAARLVS 1367
AG +KKAV+MSG PGIGKTT+A+LVS
Sbjct: 395 DAG------AKKAVLMSGTPGIGKTTSAKLVS 420
>dbj|BAJ33988.1| unnamed protein product [Thellungiella halophila]
Length = 933
Score = 506 bits (1302), Expect = e-140
Identities = 255/398 (64%), Positives = 315/398 (79%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
K+VLIMDEVDGMS GDRGGV+DL CNDRYSQKLKSL+N CLPLNFRK
Sbjct: 446 KTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNFRK 505
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQMAKRL +A+ EG++V+E ALEEL ERVNGD+R+ALNQLQYMSLS S IKY DI+
Sbjct: 506 PTKQQMAKRLTHIAKAEGLEVNEIALEELAERVNGDIRLALNQLQYMSLSMSVIKYDDIR 565
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
RL KDEDI+PFTA +KL G +LRMDE++DL MSD DLVPLL+QENYLNY+P++
Sbjct: 566 QRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDFDLVPLLVQENYLNYRPSS 625
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
G+D ++RM+L++RAA+SIADGDIIN QIRR++QWQ S ASSI+P++ +HG RE
Sbjct: 626 TGKDE--AKRMELLARAAESIADGDIINVQIRRHRQWQLSLSSCVASSILPASLLHGSRE 683
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
QGE+NFNRFG WLGKNST GKNTRLL D+HVH+LAS RE +R+DYL +LL R
Sbjct: 684 VLEQGERNFNRFGGWLGKNSTAGKNTRLLEDLHVHVLASRESSSGRETIRVDYLPLLLNR 743
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LT+PL+TLPKDEAV V++FM+ YS+SQEDFDTI+EL+KF+G +PL+ +PPAVK+ALTK
Sbjct: 744 LTSPLQTLPKDEAVSEVVEFMNSYSISQEDFDTIMELAKFKGRANPLEGVPPAVKSALTK 803
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLL 78
Y + ++R VR AD++ Q+PG KKAPK KR+A +L
Sbjct: 804 KYNETNKTRMVRAADMV---QLPGMKKAPK-KRIAAML 837
Score = 100 bits (249), Expect = 3e-18
Identities = 53/92 (57%), Positives = 65/92 (70%)
Frame = -1
Query: 1642 KALQTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRT 1463
K +QTS WTEKYRPK PN+IVGNQ++V QLH WL++W ++ TG KG KG K
Sbjct: 311 KIIQTSLP----WTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKG-KGKKLN 365
Query: 1462 GAGNKSSNTSKKAVIMSGPPGIGKTTAARLVS 1367
AG +KKAV+MSG PGIGKTT+A+LVS
Sbjct: 366 DAG------AKKAVLMSGTPGIGKTTSAKLVS 391
>ref|XP_001777721.1| predicted protein [Physcomitrella patens] gi|162670941|gb|EDQ57501.1|
predicted protein [Physcomitrella patens]
Length = 850
Score = 505 bits (1301), Expect = e-140
Identities = 255/391 (65%), Positives = 304/391 (77%)
Frame = -3
Query: 1274 KKSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFR 1095
+K+VLIMDEVDGMSGGDRGGV+DL CND+YSQKLKSL+N CLPL FR
Sbjct: 411 RKAVLIMDEVDGMSGGDRGGVADLILSIKSSHIPIICICNDKYSQKLKSLINYCLPLPFR 470
Query: 1094 KPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADI 915
KPTKQQMAKRL+Q+A+ EG++VD+ ALEEL ERVNGDMRMALNQLQYMSL ++KY+D+
Sbjct: 471 KPTKQQMAKRLQQIAKSEGLEVDDLALEELSERVNGDMRMALNQLQYMSLRSRSLKYSDV 530
Query: 914 KSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPN 735
++RL KDED+TPF+A +KLLG E RLRMDE++D MSD DLVPLL+QENYLNY
Sbjct: 531 RTRLMASAKDEDVTPFSAVDKLLGFEGGRLRMDERIDAAMSDMDLVPLLVQENYLNYC-G 589
Query: 734 AAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYR 555
GRD G+ RMD I+R A SIA+GDI+N QI R++QWQH+QMGAF SS+IP+A+IHG R
Sbjct: 590 PGGRDDSGTARMDAIARTALSIAEGDIVNVQIHRFRQWQHAQMGAFMSSVIPAAYIHGRR 649
Query: 554 ETFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLT 375
E VQGE+NFNRFG WLGKNSTFGK TRLL DVHVH+LAS CE +RE +RLDYL +L
Sbjct: 650 EVLVQGERNFNRFGGWLGKNSTFGKKTRLLEDVHVHMLASRICEPTREAVRLDYLPLLSM 709
Query: 374 RLTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALT 195
LT PL TLPKDEAVQ V+D ++EYSL QED DTIV +S +G L+ +P A K ALT
Sbjct: 710 HLTQPLHTLPKDEAVQQVVDLLEEYSLDQEDMDTIVSMSTLKGGEGLLEGVPGATKTALT 769
Query: 194 KGYKQNEQSRRVRTADLIPALQIPGQKKAPK 102
K YKQ RRVR+ADL+P + +PG KKA K
Sbjct: 770 KTYKQRLSDRRVRSADLLPVMSLPGTKKAAK 800
Score = 92.0 bits (227), Expect = 9e-16
Identities = 50/108 (46%), Positives = 66/108 (61%)
Frame = -1
Query: 1693 NARNGKMNERSVQYNSNKALQTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWE 1514
N + N S + K++ + T W K+RP++ NDI+GNQ+IVKQ+ +WL WE
Sbjct: 263 NVKGKIANGTSSSVGNEKSIASG---TESWPYKHRPQSINDIIGNQSIVKQVQDWLVQWE 319
Query: 1513 NEHLNTGEKGKKGNKRTGAGNKSSNTSKKAVIMSGPPGIGKTTAARLV 1370
H N KGKKG+ SS + KKAV++SGPPGIGKTT ARLV
Sbjct: 320 KHHGN-AVKGKKGS--------SSTSQKKAVLLSGPPGIGKTTTARLV 358
>ref|XP_006287008.1| hypothetical protein CARUB_v10000156mg [Capsella rubella]
gi|482555714|gb|EOA19906.1| hypothetical protein
CARUB_v10000156mg [Capsella rubella]
Length = 953
Score = 505 bits (1300), Expect = e-140
Identities = 257/398 (64%), Positives = 314/398 (78%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
K+VLIMDEVDGMS GDRGGV+DL CNDRYSQKLKSL+N CLPLNFRK
Sbjct: 466 KTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNFRK 525
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQMAKRL +A++EG++V+E ALEEL ERVNGD+R+A+NQLQYMSLS S IKY DI+
Sbjct: 526 PTKQQMAKRLMHIAKVEGLEVNEIALEELAERVNGDIRLAVNQLQYMSLSMSVIKYDDIR 585
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
RL KDED++PFTA +KL +LRMDE++DL MSDPDLVPLLIQENYLNY+P
Sbjct: 586 QRLLSSAKDEDMSPFTAVDKLFSYNGGKLRMDERIDLSMSDPDLVPLLIQENYLNYRP-- 643
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
AG+D ++RM+L++RAA+SIADGDIIN QIRRY+QWQ SQ ASSI+P++ +HG RE
Sbjct: 644 AGKDE--TKRMELLARAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASLLHGSRE 701
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
F QGE+NFNRFG WLGKNST GKN RL+ D+HVH+LAS RE LR+DYL +L R
Sbjct: 702 IFEQGERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSSGRETLRVDYLPLLRNR 761
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LT+PL+TLPKDEAV V+DFM+ YS+SQEDFDTI+EL KF+GH +P++ +PP VKAALTK
Sbjct: 762 LTSPLQTLPKDEAVSEVVDFMNSYSISQEDFDTIMELGKFKGHENPMEGVPPPVKAALTK 821
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLL 78
Y + ++R VR AD++ Q+PG KKAPK KR+A +L
Sbjct: 822 KYNETNKTRMVRVADMV---QLPGMKKAPK-KRIAAML 855
Score = 96.3 bits (238), Expect = 5e-17
Identities = 47/85 (55%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = -1
Query: 1618 ETAM-WTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRTGAGNKSS 1442
ET++ WTEKYRPK PN+IVGNQ++V Q+H WL++W ++ TG KG KG K AG
Sbjct: 334 ETSLPWTEKYRPKVPNEIVGNQSLVTQIHNWLSHWHDQFGGTGSKG-KGKKVNDAG---- 388
Query: 1441 NTSKKAVIMSGPPGIGKTTAARLVS 1367
++KA+++SG PGIGKTT+A+LVS
Sbjct: 389 --ARKAILLSGTPGIGKTTSAKLVS 411
>gb|ESW04506.1| hypothetical protein PHAVU_011G100500g [Phaseolus vulgaris]
Length = 938
Score = 504 bits (1299), Expect = e-140
Identities = 259/402 (64%), Positives = 313/402 (77%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
KSVLIMDEVDGMS GDRGGV+DL CNDRYSQKLKSL+N CL L+FRK
Sbjct: 455 KSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRK 514
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQMAKRL VA+ EG++V+E ALEEL ERVNGD+RMA+NQLQYMSLS S I Y DI+
Sbjct: 515 PTKQQMAKRLMDVAKAEGLQVNEIALEELAERVNGDVRMAVNQLQYMSLSMSVINYDDIR 574
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
R KDEDI+PFTA +KL G + +LRMDE+++L MSDPDLVPLLIQENY+NYKP+
Sbjct: 575 QRFLTNAKDEDISPFTAVDKLFGFNAGKLRMDERINLSMSDPDLVPLLIQENYINYKPSL 634
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
AG+D +G +RM+LI+RAA+SIADGDI+N QIRRY+QWQ SQ A+ IIP++ +HG RE
Sbjct: 635 AGKDDNGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQASCTATCIIPASLLHGQRE 694
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
QGE+NFNRFG WLGKNST GKN RLL D+HVHILAS R+ +R++YL+++L R
Sbjct: 695 ILEQGERNFNRFGGWLGKNSTMGKNFRLLDDLHVHILASRESSSGRDTIRMEYLTLILKR 754
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LT PL+TLPK EAVQ V++FM+ YS+SQEDFDTIVELSKF+GH +PL I PA+K+ALTK
Sbjct: 755 LTEPLRTLPKAEAVQQVVEFMNTYSISQEDFDTIVELSKFKGHPNPLDGIQPAIKSALTK 814
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDE 66
YK+ +SR VR AD I +PG KKAPK KR+A +L E
Sbjct: 815 AYKEQSKSRVVRVADQI---TLPGVKKAPK-KRIAAILEPAE 852
Score = 92.8 bits (229), Expect = 5e-16
Identities = 46/102 (45%), Positives = 64/102 (62%)
Frame = -1
Query: 1675 MNERSVQYNSNKALQTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNT 1496
++ RS + T+ + MWTEKYRPK P DI+GNQ+++ QL WL W + +T
Sbjct: 305 LSSRSPSKQAKPVAATTIESSVMWTEKYRPKDPKDIIGNQSLIVQLRNWLKAWNEQFSDT 364
Query: 1495 GEKGKKGNKRTGAGNKSSNTSKKAVIMSGPPGIGKTTAARLV 1370
G K KKG K ++ + KKAV++SG PGIGKTT+A+LV
Sbjct: 365 GNK-KKGKK------QNDSVLKKAVLLSGTPGIGKTTSAKLV 399
>ref|XP_004506246.1| PREDICTED: replication factor C subunit 1-like [Cicer arietinum]
Length = 997
Score = 504 bits (1297), Expect = e-140
Identities = 256/403 (63%), Positives = 313/403 (77%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
K+VLIMDEVDGMS GDRGGV+DL CNDRYSQKLKSL+N CL L++RK
Sbjct: 509 KTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSYRK 568
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQMAK+ VA+ EG++V+E ALEEL ERVNGDMRMALNQLQYM LS S I Y DI+
Sbjct: 569 PTKQQMAKKFMDVAKAEGLQVNEIALEELAERVNGDMRMALNQLQYMGLSMSVINYDDIR 628
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
RL KDEDI+PFTA +KL G + +++MDE+++L MSDPDLVPLLIQENY+NY+P++
Sbjct: 629 KRLLTNAKDEDISPFTAVDKLFGFNAGKMKMDERINLSMSDPDLVPLLIQENYINYRPSS 688
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
AG+D +G +RM+LI+RAA+SIADGDI+N QIRRY+QWQ SQ + AS I+P++ +HG RE
Sbjct: 689 AGKDDNGVKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTSSVASCILPASLLHGQRE 748
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
QGE+NFNRFG WLGKNST GKNTRL+ D+HVHILAS R +RL+YLS+LL +
Sbjct: 749 ILEQGERNFNRFGGWLGKNSTMGKNTRLMDDLHVHILASRESSSGRVTIRLEYLSLLLKK 808
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LT PLK LPK EAV+ V++FM+ YS+SQEDFDTIVELSKF+GH +PL I PAVK+ALTK
Sbjct: 809 LTEPLKVLPKAEAVEKVVEFMNTYSISQEDFDTIVELSKFKGHPNPLDGILPAVKSALTK 868
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDEG 63
YK+ ++R VR ADLI +PG KKAPK + A L DEG
Sbjct: 869 AYKEQSKTRTVRAADLI---NLPGIKKAPKKRIAAILEPADEG 908
Score = 89.7 bits (221), Expect = 4e-15
Identities = 44/91 (48%), Positives = 56/91 (61%)
Frame = -1
Query: 1642 KALQTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKRT 1463
KA + MWTEK+RP P DI+GNQ++V QL WL W + NTG K+G K
Sbjct: 369 KAKPKTVQSNLMWTEKHRPTNPKDIIGNQSLVSQLRNWLKGWHEQFSNTGGNKKQGKK-- 426
Query: 1462 GAGNKSSNTSKKAVIMSGPPGIGKTTAARLV 1370
+ SKKAV++SG PGIGKTT+A+LV
Sbjct: 427 ----LNDPVSKKAVLLSGTPGIGKTTSAKLV 453
>ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
Length = 942
Score = 504 bits (1297), Expect = e-140
Identities = 264/402 (65%), Positives = 311/402 (77%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
K+VLIMDEVDGMS GDRGGV+DL CNDRYSQKLKSL+N CL L+FRK
Sbjct: 453 KTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILSFRK 512
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQMAKRL QVA EG++V+E ALEEL ERVNGDMRMALNQLQY+SLS S IKY DI+
Sbjct: 513 PTKQQMAKRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIR 572
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
RL KDEDI+PFTA +KL G S +LRMDE++DL MSD DLVPLLIQENY+NY+P+A
Sbjct: 573 QRLLSSKKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSA 632
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
+D G +RMDLI+RAA+SIADGDIIN QIRR++QWQ SQ AS IIP++ +HG RE
Sbjct: 633 VSKDDTGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCVASCIIPASLLHGQRE 692
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
T Q E+NFNRFGAWLGKNSTFGKN RLL D+HVHILAS RE+LR++ L++ L R
Sbjct: 693 TLEQYERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKR 752
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LT PL TLPKDEAV+ V++FM YS+SQEDFDT++ELSKFQG +PL + PAVKAALTK
Sbjct: 753 LTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTK 812
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDE 66
YK+ ++ VR ADLI +PG KKAPK KR+A +L E
Sbjct: 813 AYKEASKTHMVRAADLI---ALPGMKKAPK-KRIAAILEPTE 850
Score = 102 bits (253), Expect = 9e-19
Identities = 55/109 (50%), Positives = 70/109 (64%), Gaps = 5/109 (4%)
Frame = -1
Query: 1678 KMNERSVQYNSNKALQTSKAETA-----MWTEKYRPKTPNDIVGNQTIVKQLHEWLANWE 1514
K E + N K SK+ TA WTEKYRPK PNDI+GNQ++VKQLH+WLA+W
Sbjct: 297 KSEESPTKKNFQKVQAKSKSGTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWN 356
Query: 1513 NEHLNTGEKGKKGNKRTGAGNKSSNTSKKAVIMSGPPGIGKTTAARLVS 1367
L+ G K KK K + +G +KKAV++ G PGIGKTT+A+LVS
Sbjct: 357 ENFLDVGSK-KKVKKASDSG------AKKAVLLCGGPGIGKTTSAKLVS 398
>ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
Length = 981
Score = 504 bits (1297), Expect = e-140
Identities = 264/402 (65%), Positives = 311/402 (77%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
K+VLIMDEVDGMS GDRGGV+DL CNDRYSQKLKSL+N CL L+FRK
Sbjct: 479 KTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILSFRK 538
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQMAKRL QVA EG++V+E ALEEL ERVNGDMRMALNQLQY+SLS S IKY DI+
Sbjct: 539 PTKQQMAKRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIR 598
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
RL KDEDI+PFTA +KL G S +LRMDE++DL MSD DLVPLLIQENY+NY+P+A
Sbjct: 599 QRLLSSKKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSA 658
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
+D G +RMDLI+RAA+SIADGDIIN QIRR++QWQ SQ AS IIP++ +HG RE
Sbjct: 659 VSKDDTGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCVASCIIPASLLHGQRE 718
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
T Q E+NFNRFGAWLGKNSTFGKN RLL D+HVHILAS RE+LR++ L++ L R
Sbjct: 719 TLEQYERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKR 778
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LT PL TLPKDEAV+ V++FM YS+SQEDFDT++ELSKFQG +PL + PAVKAALTK
Sbjct: 779 LTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTK 838
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDE 66
YK+ ++ VR ADLI +PG KKAPK KR+A +L E
Sbjct: 839 AYKEASKTHMVRAADLI---ALPGMKKAPK-KRIAAILEPTE 876
Score = 100 bits (249), Expect = 3e-18
Identities = 55/115 (47%), Positives = 72/115 (62%), Gaps = 11/115 (9%)
Frame = -1
Query: 1678 KMNERSVQYNSNKALQ-----------TSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHE 1532
K N + VQ S+K L T++ WTEKYRPK PNDI+GNQ++VKQLH+
Sbjct: 317 KKNFQKVQAKSHKDLAAGASPAKQKSGTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHD 376
Query: 1531 WLANWENEHLNTGEKGKKGNKRTGAGNKSSNTSKKAVIMSGPPGIGKTTAARLVS 1367
WLA+W L+ G K KK K + +G +KKAV++ G PGIGKTT+A+LVS
Sbjct: 377 WLAHWNENFLDVGSK-KKVKKASDSG------AKKAVLLCGGPGIGKTTSAKLVS 424
>ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
gi|75168909|sp|Q9C587.1|RFC1_ARATH RecName:
Full=Replication factor C subunit 1; Short=AtRFC1;
AltName: Full=Activator 1 large subunit; AltName:
Full=Activator 1 subunit 1 gi|13374860|emb|CAC34494.1|
replication factor C large subunit-like protein
[Arabidopsis thaliana] gi|48958527|gb|AAT47816.1|
At5g22010 [Arabidopsis thaliana]
gi|332005585|gb|AED92968.1| replication factor C1
[Arabidopsis thaliana]
Length = 956
Score = 504 bits (1297), Expect = e-140
Identities = 255/398 (64%), Positives = 312/398 (78%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
K+VLIMDEVDGMS GDRGGV+DL CNDRYSQKLKSL+N CLPLN+RK
Sbjct: 469 KTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNYRK 528
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQMAKRL +A+ EG++++E ALEEL ERVNGD+R+A+NQLQYMSLS S IKY DI+
Sbjct: 529 PTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQYMSLSMSVIKYDDIR 588
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
RL KDEDI+PFTA +KL G +LRMDE++DL MSDPDLVPLLIQENYLNY+P+
Sbjct: 589 QRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYLNYRPSG 648
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
D ++RMDL++RAA+SIADGDIIN QIRRY+QWQ SQ ASSI+P++ +HG RE
Sbjct: 649 K----DEAKRMDLLARAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASLLHGSRE 704
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
QGE+NFNRFG WLGKNST GKN RL+ D+HVH+LAS RE LR+DYL +LL+R
Sbjct: 705 VLEQGERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSAGRETLRVDYLPLLLSR 764
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LT+PL+TLPKDEAV V+DFM+ YS+SQEDFDTI+EL KF+G +P++ +PP VKAALTK
Sbjct: 765 LTSPLQTLPKDEAVSEVVDFMNSYSISQEDFDTILELGKFKGRENPMEGVPPPVKAALTK 824
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLL 78
Y + ++R VR AD++ Q+PG KKAPK KR+A +L
Sbjct: 825 KYNEMNKTRMVRVADMV---QLPGVKKAPK-KRIAAML 858
Score = 101 bits (252), Expect = 1e-18
Identities = 53/93 (56%), Positives = 66/93 (70%)
Frame = -1
Query: 1645 NKALQTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLNTGEKGKKGNKR 1466
NK ++TS WTEKYRPK PN+IVGNQ++V QLH WL++W ++ TG KG KG K
Sbjct: 333 NKIIETSLP----WTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKG-KGKKL 387
Query: 1465 TGAGNKSSNTSKKAVIMSGPPGIGKTTAARLVS 1367
AG SKKAV++SG PGIGKTT+A+LVS
Sbjct: 388 NDAG------SKKAVLLSGTPGIGKTTSAKLVS 414
>emb|CAC86668.1| replication factor C large subunit [Triticum sp.]
Length = 543
Score = 503 bits (1296), Expect = e-139
Identities = 265/420 (63%), Positives = 313/420 (74%), Gaps = 1/420 (0%)
Frame = -3
Query: 1310 NATIHRGLTNGGK-KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKL 1134
NAT++ K K+VLIMDEVDGMS GDRGGV+DL CNDRYSQKL
Sbjct: 43 NATLNYSDNRTKKPKAVLIMDEVDGMSAGDRGGVADLIASIKISKIPIVCICNDRYSQKL 102
Query: 1133 KSLMNSCLPLNFRKPTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQY 954
KSL+N CL LNFRKPTKQQM KRL ++A EGI+ E A+EEL ERV+GD+RMALN LQY
Sbjct: 103 KSLVNYCLLLNFRKPTKQQMGKRLMEIARKEGIQAQENAMEELAERVHGDIRMALNHLQY 162
Query: 953 MSLSFSAIKYADIKSRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVP 774
MSLS S +KY DI+ RL KDEDI+PFTA +KL G RLRMDE++DL MSDPDLVP
Sbjct: 163 MSLSQSVVKYDDIRLRLNSSSKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVP 222
Query: 773 LLIQENYLNYKPNAAGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFA 594
L+IQENY+NY+P+A G+D G +RM+ ++RAA+SIADGDI+N QIRRY+QWQ SQ A
Sbjct: 223 LIIQENYINYRPSAEGKDDSGVKRMNYLARAAESIADGDIVNVQIRRYRQWQLSQAACLA 282
Query: 593 SSIIPSAFIHGYRETFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSR 414
SSI+P+A +HG RE GE+NFNRFG WLGK ST KN RLL DVH HILAS L R
Sbjct: 283 SSIVPAALMHGNREVLEAGERNFNRFGGWLGKYSTTNKNKRLLEDVHSHILASQQANLDR 342
Query: 413 ENLRLDYLSVLLTRLTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDP 234
E LRLDYL++LL +LT PLKT+PK+EAVQ V++FMD YSLSQEDFDT+VELSKF+GH +P
Sbjct: 343 EALRLDYLTLLLRQLTGPLKTMPKEEAVQKVVEFMDTYSLSQEDFDTLVELSKFKGHPNP 402
Query: 233 LKSIPPAVKAALTKGYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDEGEFP 54
+ I PAVK+ALTK YKQ SR VR+ADLI IPG KK K KRVA +L + P
Sbjct: 403 MDGIQPAVKSALTKAYKQGSSSRVVRSADLI---NIPGMKKTLK-KRVAAILEPLDESLP 458
>ref|XP_006663537.1| PREDICTED: replication factor C subunit 1-like [Oryza brachyantha]
Length = 1061
Score = 502 bits (1292), Expect = e-139
Identities = 258/406 (63%), Positives = 306/406 (75%)
Frame = -3
Query: 1271 KSVLIMDEVDGMSGGDRGGVSDLXXXXXXXXXXXXXXCNDRYSQKLKSLMNSCLPLNFRK 1092
K+VL+MDEVDGMS GDRGGV+DL CNDRYSQKLKSL+N CL LNFRK
Sbjct: 575 KAVLVMDEVDGMSAGDRGGVADLIASIKISKIPIVCICNDRYSQKLKSLVNYCLLLNFRK 634
Query: 1091 PTKQQMAKRLRQVAELEGIKVDEAALEELGERVNGDMRMALNQLQYMSLSFSAIKYADIK 912
PTKQQM KRL ++A+ EG++ E A+EEL ERV+GD+RMALN LQYMSLS S +KY DI+
Sbjct: 635 PTKQQMGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQYMSLSQSVVKYDDIR 694
Query: 911 SRLKDGGKDEDITPFTAANKLLGVESSRLRMDEKMDLCMSDPDLVPLLIQENYLNYKPNA 732
RL KDEDI+PFTA +KL G RLRMDE++DL MSDPDLVPL+IQENY+NY+P
Sbjct: 695 QRLSSSTKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLIIQENYINYRPIT 754
Query: 731 AGRDVDGSRRMDLISRAADSIADGDIINKQIRRYQQWQHSQMGAFASSIIPSAFIHGYRE 552
G+D G +RM+ ++RAA+SIADGDI+N QIRRY+QWQ SQ +SSI+P+A +HG RE
Sbjct: 755 VGKDDSGVKRMNFLARAAESIADGDIVNVQIRRYRQWQLSQAACLSSSIVPAALMHGNRE 814
Query: 551 TFVQGEQNFNRFGAWLGKNSTFGKNTRLLSDVHVHILASSACELSRENLRLDYLSVLLTR 372
GE+NFNRFG WLGK ST KN RLL D H HILAS L RE+LRLDYL++LL +
Sbjct: 815 ILEAGERNFNRFGGWLGKYSTTNKNKRLLEDAHSHILASQQANLDRESLRLDYLTLLLQQ 874
Query: 371 LTNPLKTLPKDEAVQAVLDFMDEYSLSQEDFDTIVELSKFQGHLDPLKSIPPAVKAALTK 192
LT+PLKT+PKDEAVQ V++FMD YSLSQEDFDTIVELSKF+GH +P+ I PAVK+ALTK
Sbjct: 875 LTDPLKTMPKDEAVQKVVEFMDTYSLSQEDFDTIVELSKFKGHPNPMDGIQPAVKSALTK 934
Query: 191 GYKQNEQSRRVRTADLIPALQIPGQKKAPKTKRVAKLLNTDEGEFP 54
YKQ SR VR ADL+ IPG KK P KRVA +L E P
Sbjct: 935 AYKQGSSSRVVRAADLV---NIPGMKK-PLKKRVAAILEPVEESVP 976
Score = 110 bits (275), Expect = 2e-21
Identities = 55/104 (52%), Positives = 75/104 (72%)
Frame = -1
Query: 1678 KMNERSVQYNSNKALQTSKAETAMWTEKYRPKTPNDIVGNQTIVKQLHEWLANWENEHLN 1499
K N+ V ++ KA + + WTEKYRPK PNDIVGNQ++VKQLH+WL W+++ L+
Sbjct: 425 KSNKERVSTDNQKAKIIDRG-SMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKGWDDQFLH 483
Query: 1498 TGEKGKKGNKRTGAGNKSSNTSKKAVIMSGPPGIGKTTAARLVS 1367
+G+KG KG K++ G SKKAV++SGPPGIGKTT A++VS
Sbjct: 484 SGQKG-KGKKQSDGG------SKKAVLLSGPPGIGKTTTAKVVS 520