BLASTX nr result

ID: Ephedra25_contig00010406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00010406
         (816 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24618.1| unknown [Picea sitchensis]                              63   1e-07
ref|XP_004144256.1| PREDICTED: F-box protein SKP2A-like [Cucumis...    57   8e-06

>gb|ABK24618.1| unknown [Picea sitchensis]
          Length = 438

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = +2

Query: 2   MELLLRILKTIDERTLVRAADVCTSWRLAICFGVQELSLSW 124
           MELL+RIL+ +D+RT++  + VCT WR AIC GVQELSLSW
Sbjct: 53  MELLMRILRLVDDRTVIIGSGVCTGWREAICIGVQELSLSW 93


>ref|XP_004144256.1| PREDICTED: F-box protein SKP2A-like [Cucumis sativus]
           gi|449517068|ref|XP_004165568.1| PREDICTED: F-box
           protein SKP2A-like [Cucumis sativus]
          Length = 376

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +2

Query: 2   MELLLRILKTIDERTLVRAADVCTSWRLAICFGVQELSLSW 124
           MELLL+IL  +D+RT++ A+ VC  WR AICFG+  LSLSW
Sbjct: 50  MELLLQILSLVDDRTVIVASGVCRGWRDAICFGLAHLSLSW 90


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