BLASTX nr result
ID: Ephedra25_contig00010275
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00010275
(571 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [A... 147 2e-33
gb|EEC75179.1| hypothetical protein OsI_11406 [Oryza sativa Indi... 133 4e-29
ref|XP_006482954.1| PREDICTED: zinc finger CCCH domain-containin... 132 5e-29
ref|XP_006438916.1| hypothetical protein CICLE_v10030728mg [Citr... 132 5e-29
ref|XP_006438914.1| hypothetical protein CICLE_v10030728mg [Citr... 132 5e-29
ref|XP_006482953.1| PREDICTED: zinc finger CCCH domain-containin... 132 8e-29
ref|XP_006438915.1| hypothetical protein CICLE_v10030728mg [Citr... 132 8e-29
ref|XP_006438913.1| hypothetical protein CICLE_v10030728mg [Citr... 132 8e-29
gb|EEE58990.1| hypothetical protein OsJ_10700 [Oryza sativa Japo... 132 8e-29
gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-bind... 131 1e-28
ref|NP_001050002.1| Os03g0328900 [Oryza sativa Japonica Group] g... 131 1e-28
sp|Q10M00.2|C3H22_ORYSJ RecName: Full=Zinc finger CCCH domain-co... 131 1e-28
ref|XP_004984505.1| PREDICTED: zinc finger CCCH domain-containin... 130 2e-28
ref|NP_001152488.1| nucleic acid binding protein [Zea mays] gi|1... 130 2e-28
gb|AFW88477.1| putative RNA-binding zinc finger family protein [... 129 4e-28
tpg|DAA53353.1| TPA: putative RNA-binding zinc finger family pro... 129 5e-28
gb|AFW88476.1| putative RNA-binding zinc finger family protein [... 128 9e-28
ref|XP_006829762.1| hypothetical protein AMTR_s00119p00021560 [A... 128 1e-27
gb|ESW03436.1| hypothetical protein PHAVU_011G0138001g [Phaseolu... 127 2e-27
ref|NP_001030921.1| RNA-binding (RRM/RBD/RNP motifs) family prot... 127 2e-27
>ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
gi|548839320|gb|ERM99613.1| hypothetical protein
AMTR_s00088p00158600 [Amborella trichopoda]
Length = 575
Score = 147 bits (370), Expect = 2e-33
Identities = 88/194 (45%), Positives = 106/194 (54%), Gaps = 18/194 (9%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYFR +GPV DVRIP QQKRMFGFVTFMYPETVK+IL KGNPH+VCGARVLVKPY+EK
Sbjct: 366 VSNYFRTFGPVQDVRIPCQQKRMFGFVTFMYPETVKMILNKGNPHFVCGARVLVKPYREK 425
Query: 181 G-----------------XXXXXXXXXXXHLGPRLFDNSDIIRRQF-TDQEHALELERKR 306
P ++D++ +IR+Q +QEHA+ELER+R
Sbjct: 426 SRLVDRKYPEKIDHPVYYSPHFLDMEPEYQSVPGIWDDARLIRKQLREEQEHAIELERRR 485
Query: 307 LSELNLIDSQNRHGHFPQDNQACFISSTKGYNSHTVLHQQFTNGLAESEEETKPSEDLSN 486
LSE + H +F GY ++ K SED +
Sbjct: 486 LSEFQMASKPLSHNYF-------------GY----------------PMDDFKLSEDQNG 516
Query: 487 FTPTDHFGYLLDVL 528
F TD FGYLLDVL
Sbjct: 517 FPSTDRFGYLLDVL 530
>gb|EEC75179.1| hypothetical protein OsI_11406 [Oryza sativa Indica Group]
Length = 686
Score = 133 bits (334), Expect = 4e-29
Identities = 79/184 (42%), Positives = 100/184 (54%), Gaps = 29/184 (15%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPVHDVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH++C ARVLVKPYKEK
Sbjct: 383 VSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEK 442
Query: 181 G------------------XXXXXXXXXXXHLGPRLFDNSD-----IIRRQFTDQEHALE 291
G LG R+ +S+ I+RR+ +Q+ A E
Sbjct: 443 GKVPDKKHQGDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMILRRKLEEQQQAAE 502
Query: 292 LER------KRLSELNLIDSQNRHGHFPQDNQACFISSTKGYNSHTVLHQQFTNGLAESE 453
L++ +RL +L L+D +NR A I + + S L +S
Sbjct: 503 LQQAIELHSRRLMDLQLLDLKNRAAAAVTTAMAMTIPTANAFGSSQPLATTMVESPPDSG 562
Query: 454 EETK 465
E+ K
Sbjct: 563 EQLK 566
>ref|XP_006482954.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X2 [Citrus sinensis]
Length = 713
Score = 132 bits (333), Expect = 5e-29
Identities = 84/194 (43%), Positives = 102/194 (52%), Gaps = 28/194 (14%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPV DVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH+VC ARVLVKPYKEK
Sbjct: 391 VSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEK 450
Query: 181 G----------------------XXXXXXXXXXXHLGPRLFDNSD---IIRRQFTDQ--- 276
G LG R+F N+ + RR+ +Q
Sbjct: 451 GKVPDKKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADL 510
Query: 277 EHALELERKRLSELNLIDSQNRHGHFPQDNQACFISSTKGYNSHTVLHQQFTNGLAESEE 456
+ ALEL+ +RL L L+D + H H + S T +S + HQ S
Sbjct: 511 QQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSPT---HSPNIFHQNLVFPPLHSSS 567
Query: 457 ETKPSEDLSNFTPT 498
P E+ S+ PT
Sbjct: 568 AEPPPENGSSPLPT 581
>ref|XP_006438916.1| hypothetical protein CICLE_v10030728mg [Citrus clementina]
gi|557541112|gb|ESR52156.1| hypothetical protein
CICLE_v10030728mg [Citrus clementina]
Length = 807
Score = 132 bits (333), Expect = 5e-29
Identities = 84/194 (43%), Positives = 102/194 (52%), Gaps = 28/194 (14%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPV DVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH+VC ARVLVKPYKEK
Sbjct: 391 VSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEK 450
Query: 181 G----------------------XXXXXXXXXXXHLGPRLFDNSD---IIRRQFTDQ--- 276
G LG R+F N+ + RR+ +Q
Sbjct: 451 GKVPDKKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADL 510
Query: 277 EHALELERKRLSELNLIDSQNRHGHFPQDNQACFISSTKGYNSHTVLHQQFTNGLAESEE 456
+ ALEL+ +RL L L+D + H H + S T +S + HQ S
Sbjct: 511 QQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSPT---HSPNIFHQNLVFPPLHSSS 567
Query: 457 ETKPSEDLSNFTPT 498
P E+ S+ PT
Sbjct: 568 AEPPPENGSSPLPT 581
>ref|XP_006438914.1| hypothetical protein CICLE_v10030728mg [Citrus clementina]
gi|557541110|gb|ESR52154.1| hypothetical protein
CICLE_v10030728mg [Citrus clementina]
Length = 690
Score = 132 bits (333), Expect = 5e-29
Identities = 84/194 (43%), Positives = 102/194 (52%), Gaps = 28/194 (14%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPV DVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH+VC ARVLVKPYKEK
Sbjct: 391 VSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEK 450
Query: 181 G----------------------XXXXXXXXXXXHLGPRLFDNSD---IIRRQFTDQ--- 276
G LG R+F N+ + RR+ +Q
Sbjct: 451 GKVPDKKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQADL 510
Query: 277 EHALELERKRLSELNLIDSQNRHGHFPQDNQACFISSTKGYNSHTVLHQQFTNGLAESEE 456
+ ALEL+ +RL L L+D + H H + S T +S + HQ S
Sbjct: 511 QQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSPT---HSPNIFHQNLVFPPLHSSS 567
Query: 457 ETKPSEDLSNFTPT 498
P E+ S+ PT
Sbjct: 568 AEPPPENGSSPLPT 581
>ref|XP_006482953.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X1 [Citrus sinensis]
Length = 715
Score = 132 bits (331), Expect = 8e-29
Identities = 84/196 (42%), Positives = 102/196 (52%), Gaps = 30/196 (15%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPV DVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH+VC ARVLVKPYKEK
Sbjct: 391 VSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEK 450
Query: 181 G------------------------XXXXXXXXXXXHLGPRLFDNSD---IIRRQFTDQ- 276
G LG R+F N+ + RR+ +Q
Sbjct: 451 GKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQA 510
Query: 277 --EHALELERKRLSELNLIDSQNRHGHFPQDNQACFISSTKGYNSHTVLHQQFTNGLAES 450
+ ALEL+ +RL L L+D + H H + S T +S + HQ S
Sbjct: 511 DLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSPT---HSPNIFHQNLVFPPLHS 567
Query: 451 EEETKPSEDLSNFTPT 498
P E+ S+ PT
Sbjct: 568 SSAEPPPENGSSPLPT 583
>ref|XP_006438915.1| hypothetical protein CICLE_v10030728mg [Citrus clementina]
gi|567892793|ref|XP_006438917.1| hypothetical protein
CICLE_v10030728mg [Citrus clementina]
gi|557541111|gb|ESR52155.1| hypothetical protein
CICLE_v10030728mg [Citrus clementina]
gi|557541113|gb|ESR52157.1| hypothetical protein
CICLE_v10030728mg [Citrus clementina]
Length = 715
Score = 132 bits (331), Expect = 8e-29
Identities = 84/196 (42%), Positives = 102/196 (52%), Gaps = 30/196 (15%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPV DVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH+VC ARVLVKPYKEK
Sbjct: 391 VSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEK 450
Query: 181 G------------------------XXXXXXXXXXXHLGPRLFDNSD---IIRRQFTDQ- 276
G LG R+F N+ + RR+ +Q
Sbjct: 451 GKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQA 510
Query: 277 --EHALELERKRLSELNLIDSQNRHGHFPQDNQACFISSTKGYNSHTVLHQQFTNGLAES 450
+ ALEL+ +RL L L+D + H H + S T +S + HQ S
Sbjct: 511 DLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSPT---HSPNIFHQNLVFPPLHS 567
Query: 451 EEETKPSEDLSNFTPT 498
P E+ S+ PT
Sbjct: 568 SSAEPPPENGSSPLPT 583
>ref|XP_006438913.1| hypothetical protein CICLE_v10030728mg [Citrus clementina]
gi|557541109|gb|ESR52153.1| hypothetical protein
CICLE_v10030728mg [Citrus clementina]
Length = 701
Score = 132 bits (331), Expect = 8e-29
Identities = 84/196 (42%), Positives = 102/196 (52%), Gaps = 30/196 (15%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPV DVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH+VC ARVLVKPYKEK
Sbjct: 391 VSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEK 450
Query: 181 G------------------------XXXXXXXXXXXHLGPRLFDNSD---IIRRQFTDQ- 276
G LG R+F N+ + RR+ +Q
Sbjct: 451 GKVPDKYRKQQQQVERGEFSPCGTPTGLDSRDPFDLQLGARMFYNNTQDMLWRRKMEEQA 510
Query: 277 --EHALELERKRLSELNLIDSQNRHGHFPQDNQACFISSTKGYNSHTVLHQQFTNGLAES 450
+ ALEL+ +RL L L+D + H H + S T +S + HQ S
Sbjct: 511 DLQQALELQSRRLMGLQLLDVKKHHHHRALSTGSPIPSPT---HSPNIFHQNLVFPPLHS 567
Query: 451 EEETKPSEDLSNFTPT 498
P E+ S+ PT
Sbjct: 568 SSAEPPPENGSSPLPT 583
>gb|EEE58990.1| hypothetical protein OsJ_10700 [Oryza sativa Japonica Group]
Length = 686
Score = 132 bits (331), Expect = 8e-29
Identities = 78/184 (42%), Positives = 100/184 (54%), Gaps = 29/184 (15%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPVHDVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH++C ARVLVKPYKEK
Sbjct: 383 VSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEK 442
Query: 181 G------------------XXXXXXXXXXXHLGPRLFDNSD-----IIRRQFTDQEHALE 291
G LG R+ +S+ ++RR+ +Q+ A E
Sbjct: 443 GKVPDKKHQGDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLRRKLEEQQQAAE 502
Query: 292 LER------KRLSELNLIDSQNRHGHFPQDNQACFISSTKGYNSHTVLHQQFTNGLAESE 453
L++ +RL +L L+D +NR A I + + S L +S
Sbjct: 503 LQQAIELHSRRLMDLQLLDLKNRAAAAVTTAMAMTIPTANAFGSSQPLATTMVESPPDSG 562
Query: 454 EETK 465
E+ K
Sbjct: 563 EQLK 566
>gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
gi|508701579|gb|EOX93475.1| CCCH-type zinc fingerfamily
protein with RNA-binding domain, putative isoform 1
[Theobroma cacao] gi|508701580|gb|EOX93476.1| CCCH-type
zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
Length = 545
Score = 131 bits (330), Expect = 1e-28
Identities = 84/194 (43%), Positives = 101/194 (52%), Gaps = 18/194 (9%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF +GPV DVRIP QQKRMFGFVTF+Y ETVK ILAKGNPH+VCGARVLVKPY+EK
Sbjct: 367 VSNYFNKFGPVQDVRIPCQQKRMFGFVTFVYAETVKQILAKGNPHFVCGARVLVKPYREK 426
Query: 181 G--------XXXXXXXXXXXHL---------GPRLFDNSDIIRRQ-FTDQEHALELERKR 306
HL PR+ DNS ++R+Q D E LE E++R
Sbjct: 427 SRVVDRKFTEKVQQPMYYSPHLIDGDTELQSMPRVCDNSRLLRKQIIEDNEQVLEFEKRR 486
Query: 307 LSELNLIDSQNRHGHFPQDNQACFISSTKGYNSHTVLHQQFTNGLAESEEETKPSEDLSN 486
SEL L Q+ H S GY S +E K +++
Sbjct: 487 FSELQLAPKQHLTNH-----------SYFGY----------------SMDELKHTDEQVE 519
Query: 487 FTPTDHFGYLLDVL 528
F + + YLLDVL
Sbjct: 520 FPSAERYNYLLDVL 533
>ref|NP_001050002.1| Os03g0328900 [Oryza sativa Japonica Group]
gi|108707942|gb|ABF95737.1| Zinc finger C-x8-C-x5-C-x3-H
type family protein, expressed [Oryza sativa Japonica
Group] gi|113548473|dbj|BAF11916.1| Os03g0328900 [Oryza
sativa Japonica Group] gi|215734917|dbj|BAG95639.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 131 bits (329), Expect = 1e-28
Identities = 78/186 (41%), Positives = 100/186 (53%), Gaps = 31/186 (16%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPVHDVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH++C ARVLVKPYKEK
Sbjct: 383 VSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEK 442
Query: 181 G--------------------XXXXXXXXXXXHLGPRLFDNSD-----IIRRQFTDQEHA 285
G LG R+ +S+ ++RR+ +Q+ A
Sbjct: 443 GKVPDKYRKHQGDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLRRKLEEQQQA 502
Query: 286 LELER------KRLSELNLIDSQNRHGHFPQDNQACFISSTKGYNSHTVLHQQFTNGLAE 447
EL++ +RL +L L+D +NR A I + + S L +
Sbjct: 503 AELQQAIELHSRRLMDLQLLDLKNRAAAAVTTAMAMTIPTANAFGSSQPLATTMVESPPD 562
Query: 448 SEEETK 465
S E+ K
Sbjct: 563 SGEQLK 568
>sp|Q10M00.2|C3H22_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 22;
Short=OsC3H22 gi|108707943|gb|ABF95738.1| Zinc finger
C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
Length = 688
Score = 131 bits (329), Expect = 1e-28
Identities = 78/186 (41%), Positives = 100/186 (53%), Gaps = 31/186 (16%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPVHDVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH++C ARVLVKPYKEK
Sbjct: 383 VSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEK 442
Query: 181 G--------------------XXXXXXXXXXXHLGPRLFDNSD-----IIRRQFTDQEHA 285
G LG R+ +S+ ++RR+ +Q+ A
Sbjct: 443 GKVPDKYRKHQGDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLRRKLEEQQQA 502
Query: 286 LELER------KRLSELNLIDSQNRHGHFPQDNQACFISSTKGYNSHTVLHQQFTNGLAE 447
EL++ +RL +L L+D +NR A I + + S L +
Sbjct: 503 AELQQAIELHSRRLMDLQLLDLKNRAAAAVTTAMAMTIPTANAFGSSQPLATTMVESPPD 562
Query: 448 SEEETK 465
S E+ K
Sbjct: 563 SGEQLK 568
>ref|XP_004984505.1| PREDICTED: zinc finger CCCH domain-containing protein 22-like
[Setaria italica]
Length = 676
Score = 130 bits (328), Expect = 2e-28
Identities = 70/140 (50%), Positives = 87/140 (62%), Gaps = 26/140 (18%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPVHDVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH++C ARVLVKPYKEK
Sbjct: 383 VSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEK 442
Query: 181 G---------------------XXXXXXXXXXXHLGPRLFDNSD-----IIRRQFTDQEH 282
G LG R+ +S+ ++RR+ +Q+
Sbjct: 443 GKVPDKYRKQQQGDFSGCTTPTGLDTRDPFDLHQLGARMLQHSNSANELLLRRKLEEQQQ 502
Query: 283 ALELERKRLSELNLIDSQNR 342
A+EL+ +RL L L+D + R
Sbjct: 503 AIELQSRRLMGLQLLDLKAR 522
>ref|NP_001152488.1| nucleic acid binding protein [Zea mays] gi|195656755|gb|ACG47845.1|
nucleic acid binding protein [Zea mays]
Length = 653
Score = 130 bits (327), Expect = 2e-28
Identities = 72/150 (48%), Positives = 88/150 (58%), Gaps = 28/150 (18%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPVHDVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH++C ARVLVKPYKEK
Sbjct: 381 VSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEK 440
Query: 181 -----------------------GXXXXXXXXXXXHLGPRLFDNSD-----IIRRQFTDQ 276
G LG R+ +S ++RR+ +Q
Sbjct: 441 GKVPDKYRKQQLQGERAVDFFSNGLDGRENHLDLHQLGARMLQHSHSANEMLLRRKLEEQ 500
Query: 277 EHALELERKRLSELNLIDSQNRHGHFPQDN 366
+ A+EL+ +RL L L+D + R P N
Sbjct: 501 QQAMELQSRRLMGLQLLDLKPRASPSPIGN 530
>gb|AFW88477.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 684
Score = 129 bits (325), Expect = 4e-28
Identities = 70/141 (49%), Positives = 86/141 (60%), Gaps = 27/141 (19%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPVHDVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH++C ARVLVKPYKEK
Sbjct: 385 VSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEK 444
Query: 181 GXXXXXXXXXXX----------------------HLGPRLFDNSD-----IIRRQFTDQE 279
G LG R+ +S ++RR+ +Q+
Sbjct: 445 GKVPDKCRKPQQGDFSGCTTPTGGLDGGYPFDLHQLGGRMLQHSSSANELLLRRKLEEQQ 504
Query: 280 HALELERKRLSELNLIDSQNR 342
A+EL+ +RL L L+D + R
Sbjct: 505 QAIELQSRRLMGLQLLDLKAR 525
>tpg|DAA53353.1| TPA: putative RNA-binding zinc finger family protein [Zea mays]
Length = 625
Score = 129 bits (324), Expect = 5e-28
Identities = 67/120 (55%), Positives = 81/120 (67%), Gaps = 6/120 (5%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPVHDVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH++C RVLVKPYKEK
Sbjct: 375 VSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDTRVLVKPYKEK 434
Query: 181 GXXXXXXXXXXXHLGPRLFDNSDIIRRQFTDQ------EHALELERKRLSELNLIDSQNR 342
G N ++RR+ +Q +HA+EL+ +RL L L+D + R
Sbjct: 435 GKHSNSA-------------NELLLRRKLEEQQQAAELQHAIELQSRRLMGLQLLDLKAR 481
>gb|AFW88476.1| putative RNA-binding zinc finger family protein [Zea mays]
Length = 687
Score = 128 bits (322), Expect = 9e-28
Identities = 70/144 (48%), Positives = 86/144 (59%), Gaps = 30/144 (20%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPVHDVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPH++C ARVLVKPYKEK
Sbjct: 385 VSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEK 444
Query: 181 -------------------------GXXXXXXXXXXXHLGPRLFDNSD-----IIRRQFT 270
G LG R+ +S ++RR+
Sbjct: 445 GKVPDKCRHALKPQQGDFSGCTTPTGGLDGGYPFDLHQLGGRMLQHSSSANELLLRRKLE 504
Query: 271 DQEHALELERKRLSELNLIDSQNR 342
+Q+ A+EL+ +RL L L+D + R
Sbjct: 505 EQQQAIELQSRRLMGLQLLDLKAR 528
>ref|XP_006829762.1| hypothetical protein AMTR_s00119p00021560 [Amborella trichopoda]
gi|548835343|gb|ERM97178.1| hypothetical protein
AMTR_s00119p00021560 [Amborella trichopoda]
Length = 746
Score = 128 bits (321), Expect = 1e-27
Identities = 72/138 (52%), Positives = 85/138 (61%), Gaps = 24/138 (17%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPV DVRIPYQQKRMFGFVTF+YPETVK+ILAKGNPHYVC ARVLVKPYKEK
Sbjct: 445 VSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKMILAKGNPHYVCDARVLVKPYKEK 504
Query: 181 GXXXXXXXXXXXH--------------------LGPRLF-DNSDIIRRQFTDQ---EHAL 288
G G R F D+ +++RR+ +Q + AL
Sbjct: 505 GKVADKYRKPAERGDFSPTGLDSRDSYDLQLGGGGSRFFYDSHEVLRRKLEEQADLQQAL 564
Query: 289 ELERKRLSELNLIDSQNR 342
EL+ +R EL L+D + R
Sbjct: 565 ELQGRRFMELQLLDVKRR 582
>gb|ESW03436.1| hypothetical protein PHAVU_011G0138001g [Phaseolus vulgaris]
Length = 705
Score = 127 bits (320), Expect = 2e-27
Identities = 72/141 (51%), Positives = 86/141 (60%), Gaps = 26/141 (18%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VSNYF YGPV DVRIPYQQKRMFGFVTF+YPETVK+IL+KGNPH+VC ARVLVKPYKEK
Sbjct: 380 VSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEK 439
Query: 181 G---------------------XXXXXXXXXXXHLGPRLFDNSD--IIRRQFTDQ---EH 282
G LG R+F N+ + RR+ +Q +H
Sbjct: 440 GKVPDKKQQQVDRGDFSPCGTPTGLDARDQFDLQLGGRMFYNTQDMLWRRKLEEQADLQH 499
Query: 283 ALELERKRLSELNLIDSQNRH 345
ALEL+ +RL L L+D + H
Sbjct: 500 ALELQSRRLMGLQLLDIKKHH 520
>ref|NP_001030921.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|79456990|ref|NP_191904.2| RNA-binding
(RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|46518429|gb|AAS99696.1| At3g63450
[Arabidopsis thaliana] gi|332646962|gb|AEE80483.1|
RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana] gi|332646963|gb|AEE80484.1|
RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 404
Score = 127 bits (320), Expect = 2e-27
Identities = 68/118 (57%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
Frame = +1
Query: 1 VSNYFRNYGPVHDVRIPYQQKRMFGFVTFMYPETVKVILAKGNPHYVCGARVLVKPYKEK 180
VS+YF +GPV DVRIPYQQKRMFGFVTFMYPETVK ILAKGNPH+VC +RVLVKPYKEK
Sbjct: 172 VSDYFSTFGPVQDVRIPYQQKRMFGFVTFMYPETVKSILAKGNPHFVCHSRVLVKPYKEK 231
Query: 181 G----XXXXXXXXXXXHLGPRLFDNSDIIRRQFTDQEHALELERKRLSELNLIDSQNR 342
G LG R F + +R+F +E ALEL+ RL L L+D + +
Sbjct: 232 GKVPDKTKPSRDIMDFQLGGRAFHEDLLWKRRF--EERALELQSTRLMNLQLLDVEKQ 287