BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00010226
         (952 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citr...    63   1e-07
ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymera...    62   3e-07
ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymera...    60   9e-07
gb|ABK24185.1| unknown [Picea sitchensis]                              60   1e-06
ref|XP_004173745.1| PREDICTED: probable mediator of RNA polymera...    60   2e-06
ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymera...    59   2e-06
gb|EXB43778.1| hypothetical protein L484_004632 [Morus notabilis]      57   8e-06

>ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citrus clementina]
           gi|557532580|gb|ESR43763.1| hypothetical protein
           CICLE_v10011717mg [Citrus clementina]
          Length = 448

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
 Frame = +1

Query: 7   SVAHRKEQLLNE-NVVRCRQGPLD-DNQQKIKKKIGPANDRGYENKNSLRSIKSSEIPPR 180
           ++A RK+Q  NE NV+      L    Q+ + +   PAN     N    R +K +    +
Sbjct: 293 NIAKRKQQTPNEPNVLAKDNNSLQMKRQEAVVRPNKPANKPSNTNSGPGRPLKQNM--GQ 350

Query: 181 STQNLSRLQEQREKGRNTDRNPDPSNLDKRKSLPVPKMSFNEEAV--RCEVSKRKLLQSY 354
              N S+LQ++ +K    ++ P  S  +K KS        +E+AV  + E +KRKL +SY
Sbjct: 351 KVDNESKLQQKSDKAA-INKKPLNSQHNKLKSS-------DEDAVQVKLEATKRKLQESY 402

Query: 355 AREKDAKKQRTIQMVDPHEVPSAGRGFKSSQAKFGSQQR 471
              ++AKKQRTIQ+++ H++P  G G ++ Q + G+  R
Sbjct: 403 QLAENAKKQRTIQVMELHDLPKQGLGNRNPQLRPGNYNR 441


>ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Citrus sinensis]
          Length = 448

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
 Frame = +1

Query: 7   SVAHRKEQLLNE-NVVRCRQGPLD-DNQQKIKKKIGPANDRGYENKNSLRSIKSSEIPPR 180
           ++A RK+Q  NE NV+      L    Q+ + +   P+N     N    R +K +    +
Sbjct: 293 NIAKRKQQTPNEPNVLAKDNNSLQMKRQEAVVRPNKPSNKPSSTNSGPGRPLKQNM--GQ 350

Query: 181 STQNLSRLQEQREKGRNTDRNPDPSNLDKRKSLPVPKMSFNEEAV--RCEVSKRKLLQSY 354
              N S+LQ++ +K    ++ P  S  +K KS        +E+AV  + E +KRKL +SY
Sbjct: 351 KVDNESKLQQKSDKAA-INKKPLNSQHNKLKSS-------DEDAVQVKLEATKRKLQESY 402

Query: 355 AREKDAKKQRTIQMVDPHEVPSAGRGFKSSQAKFGSQQR 471
              ++AKKQRTIQ+++ H++P  G G ++ Q + G+  R
Sbjct: 403 QLAENAKKQRTIQVMELHDLPKQGLGNRNPQLRPGNYNR 441


>ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Cucumis sativus]
          Length = 452

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
 Frame = +1

Query: 19  RKEQLLNENVVRCRQGPL-------DDNQQKIKKKIGPANDRGYENKNSLRSIKSSEIPP 177
           RK    N+N  RC Q           +N+ ++K+++   N++   N NS   +++ ++  
Sbjct: 298 RKTSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNS-GLLRAQKLST 356

Query: 178 RSTQNLSRLQEQREKGRNTDRNPDPSNLDKRKSLPVPKMSFNEEAVRCEVSKRKLLQSYA 357
               N  + Q + EK     RN    N      + V         V+ E +KRKL +SY 
Sbjct: 357 EQKDNHEKFQRKLEKPTIPKRNQQ-DNFKCSDEVAVQ--------VKLEATKRKLQESYQ 407

Query: 358 REKDAKKQRTIQMVDPHEVPSAGRGFKSSQAKFGSQQR 471
           + ++AKKQRTIQ+++ H++P  G G ++   K G   R
Sbjct: 408 QAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNR 445


>gb|ABK24185.1| unknown [Picea sitchensis]
          Length = 109

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
 Frame = +1

Query: 187 QNLSRLQEQREKGRNTDRNPDPSNLDKRKSLPVPK---MSFNEEAVRCEVSKRKLLQSYA 357
           +N S + E+ E   N  R  DP+    R +   P+    S  + +VR E SKRKL + Y 
Sbjct: 4   KNSSGMSERNEHRDNVHRCTDPTKNQIRPASLPPRNKPTSSVDVSVRVEASKRKLQERYQ 63

Query: 358 REKDAKKQRTIQMVDPHEVPSAGRGF-KSSQAKFGSQQRR 474
           + + AK+QRT+Q++D  ++P  GR   K  QAK GSQ R+
Sbjct: 64  QVETAKRQRTVQVMDLQDLPKNGRNLVKPFQAKLGSQNRQ 103


>ref|XP_004173745.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Cucumis sativus]
          Length = 240

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
 Frame = +1

Query: 19  RKEQLLNENVVRCRQGPL-------DDNQQKIKKKIGPANDRGYENKNSLRSIKSSEIPP 177
           RK    N+N  RC Q           +N+ ++K+++   N++   N NS   ++  ++  
Sbjct: 86  RKTSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNS-GLLRPQKLST 144

Query: 178 RSTQNLSRLQEQREKGRNTDRNPDPSNLDKRKSLPVPKMSFNEEAVRCEVSKRKLLQSYA 357
               N  + Q + EK     RN    N      + V         V+ E +KRKL +SY 
Sbjct: 145 EQKDNHEKFQRKLEKPTIPKRNQQ-DNFKCSDEVAVQ--------VKLEATKRKLQESYQ 195

Query: 358 REKDAKKQRTIQMVDPHEVPSAGRGFKSSQAKFGSQQR 471
           + ++AKKQRTIQ+++ H++P  G G ++   K G   R
Sbjct: 196 QAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNR 233


>ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like isoform X1 [Glycine max]
           gi|571440343|ref|XP_006575125.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26b-like isoform X2 [Glycine max]
          Length = 453

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
 Frame = +1

Query: 7   SVAHRKEQLLNENVVRCRQGPLDDNQQKIKKKIGPANDRGYENKNSLRSIKSSEIPPRST 186
           + A RK Q  NE  +  +    D   Q+ KK     N+       S+ +      PP+ST
Sbjct: 302 NTAKRKPQASNEANIIAK----DSKGQQAKK-----NEAAVRPNKSVIADSGPSRPPKST 352

Query: 187 Q----NLSRLQEQREKGRNTDRNPDPSNLDKRKSLPVPKMSFNEEA-VRCEVSKRKLLQS 351
                N+    +Q        RNP    LDK      PK S +    V+ E +KRKL + 
Sbjct: 353 MQKKGNIEPKMQQNIVKSAIPRNPHIHQLDK------PKCSDDAAVHVKLEATKRKLQER 406

Query: 352 YAREKDAKKQRTIQMVDPHEVPSAGRGFKSSQAKFGSQQRR 474
           Y + + AK+QRT+Q+++ H++P  G G ++   K G+ +R+
Sbjct: 407 YQQAEKAKRQRTVQVMELHDLPKQGIGHRNPHVKPGNHKRQ 447


>gb|EXB43778.1| hypothetical protein L484_004632 [Morus notabilis]
          Length = 464

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
 Frame = +1

Query: 19  RKEQLLNENVVRCRQGPLDDNQQKIKKKIGPANDRGYENKNSLRSIKSSEIPPRSTQNLS 198
           RK  + N+NV + +Q  L      + K+      +  E         +++  P     +S
Sbjct: 305 RKPSIENQNVPKQKQ-KLSTEANVLTKEHKVQQQKKQEGVMKTTRPTNTDFGPGRPPRIS 363

Query: 199 RLQEQREKGRNTDRNPDPSNLDKRK-SLPVPKMSFNEEA---VRCEVSKRKLLQSYAREK 366
             +++      + + PD   L +R  S+P  K+  ++E    V+ E +KRKL + Y + +
Sbjct: 364 T-EQKLNSAMKSQQKPDRPALQRRPLSVPQDKLKSSDEVAVQVKLEATKRKLQERYQQAE 422

Query: 367 DAKKQRTIQMVDPHEVPSAGRGFKSSQAKFGSQQR 471
           +AK+QRTIQ+++ H++P  G G ++   K G+  R
Sbjct: 423 NAKRQRTIQVMELHDLPKQGLGHRNPHMKPGNHNR 457