BLASTX nr result

ID: Ephedra25_contig00010206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00010206
         (578 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006287170.1| hypothetical protein CARUB_v10000355mg [Caps...    57   3e-06
gb|AAF24126.1|AF121673_1 soluble starch synthase [Arabidopsis th...    56   8e-06
ref|NP_197818.1| starch synthase 1 [Arabidopsis thaliana] gi|334...    56   8e-06
ref|XP_002872103.1| hypothetical protein ARALYDRAFT_489289 [Arab...    56   8e-06

>ref|XP_006287170.1| hypothetical protein CARUB_v10000355mg [Capsella rubella]
           gi|482555876|gb|EOA20068.1| hypothetical protein
           CARUB_v10000355mg [Capsella rubella]
          Length = 697

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 22/30 (73%), Positives = 27/30 (90%)
 Frame = -3

Query: 576 GMLQNFSWENAASQYEQIFEWVMIDPPYVA 487
           GM QN+SWENAA QYEQ+F+WV +DPPYV+
Sbjct: 668 GMTQNYSWENAAVQYEQVFQWVFMDPPYVS 697


>gb|AAF24126.1|AF121673_1 soluble starch synthase [Arabidopsis thaliana]
          Length = 575

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 21/30 (70%), Positives = 27/30 (90%)
 Frame = -3

Query: 576 GMLQNFSWENAASQYEQIFEWVMIDPPYVA 487
           GM +N+SWENAA QYEQ+F+WV +DPPYV+
Sbjct: 546 GMTRNYSWENAAVQYEQVFQWVFMDPPYVS 575


>ref|NP_197818.1| starch synthase 1 [Arabidopsis thaliana]
           gi|334187896|ref|NP_001190378.1| starch synthase 1
           [Arabidopsis thaliana]
           gi|29337131|sp|Q9FNF2.1|SSY1_ARATH RecName: Full=Starch
           synthase 1, chloroplastic/amyloplastic; Short=AtSS1;
           Short=SSS; AltName: Full=Soluble starch synthase I;
           Flags: Precursor gi|10177090|dbj|BAB10396.1| soluble
           starch synthase [Arabidopsis thaliana]
           gi|22135791|gb|AAM91082.1| AT5g24300/MOP9_12
           [Arabidopsis thaliana] gi|110742056|dbj|BAE98960.1|
           soluble starch synthase [Arabidopsis thaliana]
           gi|332005899|gb|AED93282.1| starch synthase 1
           [Arabidopsis thaliana] gi|332005900|gb|AED93283.1|
           starch synthase 1 [Arabidopsis thaliana]
          Length = 652

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 21/30 (70%), Positives = 27/30 (90%)
 Frame = -3

Query: 576 GMLQNFSWENAASQYEQIFEWVMIDPPYVA 487
           GM +N+SWENAA QYEQ+F+WV +DPPYV+
Sbjct: 623 GMTRNYSWENAAVQYEQVFQWVFMDPPYVS 652


>ref|XP_002872103.1| hypothetical protein ARALYDRAFT_489289 [Arabidopsis lyrata subsp.
           lyrata] gi|297317940|gb|EFH48362.1| hypothetical protein
           ARALYDRAFT_489289 [Arabidopsis lyrata subsp. lyrata]
          Length = 655

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 21/30 (70%), Positives = 27/30 (90%)
 Frame = -3

Query: 576 GMLQNFSWENAASQYEQIFEWVMIDPPYVA 487
           GM +N+SWENAA QYEQ+F+WV +DPPYV+
Sbjct: 626 GMTRNYSWENAAVQYEQVFQWVFMDPPYVS 655


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