BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00010190
         (1280 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [...   457   e-126
ref|XP_006845102.1| hypothetical protein AMTR_s00005p00166730 [A...   457   e-126
gb|EXB54788.1| DNA topoisomerase 3-beta-1 [Morus notabilis]           443   e-122
ref|XP_001785468.1| predicted protein [Physcomitrella patens] gi...   439   e-120
ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   437   e-120
gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao]     436   e-119
gb|EMJ26496.1| hypothetical protein PRUPE_ppa001274mg [Prunus pe...   436   e-119
ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   435   e-119
ref|XP_002321105.1| DNA topoisomerase family protein [Populus tr...   434   e-119
gb|EEE69993.1| hypothetical protein OsJ_29901 [Oryza sativa Japo...   434   e-119
gb|EEC84829.1| hypothetical protein OsI_31918 [Oryza sativa Indi...   434   e-119
ref|NP_001063578.1| Os09g0500600 [Oryza sativa Japonica Group] g...   434   e-119
ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric...   433   e-119
ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   432   e-118
ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   432   e-118
ref|XP_006358794.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...   431   e-118
ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...   431   e-118
ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...   431   e-118
ref|XP_006492982.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...   431   e-118
ref|XP_003578369.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   431   e-118

>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
          Length = 894

 Score =  457 bits (1177), Expect = e-126
 Identities = 219/343 (63%), Positives = 253/343 (73%), Gaps = 3/343 (0%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            +GR+L+PT LGI+LIRGYQCID DLCLP+IR FIE QITL+AKG +DH+RVV+H LQQF 
Sbjct: 552  AGRKLVPTALGISLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQVDHSRVVEHVLQQFK 611

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
             KF+YF  QIE MD+LFEAQFSPLADSGR LSKCGKC RYMKYIS +PSR+YC TCEEV+
Sbjct: 612  QKFIYFVKQIENMDALFEAQFSPLADSGRALSKCGKCLRYMKYISTQPSRMYCGTCEEVY 671

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGEL-- 743
             LPQ GTIKLYKEL CPLDN+EL++F L GP+GK+           PFE I    G    
Sbjct: 672  YLPQKGTIKLYKELTCPLDNFELLIFSLAGPEGKSFPLCPYCYNSPPFEGIDTLFGATKT 731

Query: 742  -SLGRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSC 566
             S G+  +  GMPC  C HPTCPHS+I QGVCACPEC GTLVLDP SAPKWRL CN C+C
Sbjct: 732  SSTGKLGKGAGMPCFLCPHPTCPHSLIAQGVCACPECSGTLVLDPVSAPKWRLYCNMCNC 791

Query: 565  LVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMITM 386
            LVYLPQ ++KISTT + C +CEST+LEV+FNK  TPL +G+TLY GCILCDELLHS++ M
Sbjct: 792  LVYLPQGAHKISTTRDRCPECESTILEVDFNKKTTPLLDGSTLYTGCILCDELLHSLVEM 851

Query: 385  KHGKSFPXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            KHGKSF                           +DPKMSFRDF
Sbjct: 852  KHGKSFFKRMGSRGRGRGSGRGGFRGRGRGGKWDDPKMSFRDF 894


>ref|XP_006845102.1| hypothetical protein AMTR_s00005p00166730 [Amborella trichopoda]
            gi|548847615|gb|ERN06777.1| hypothetical protein
            AMTR_s00005p00166730 [Amborella trichopoda]
          Length = 468

 Score =  457 bits (1176), Expect = e-126
 Identities = 218/340 (64%), Positives = 251/340 (73%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            +GR+L+PT LG TLIRGYQCID DLCLP+IRGFIE QITLIAKG +DH  VV+HA++QF+
Sbjct: 130  AGRRLVPTTLGTTLIRGYQCIDSDLCLPDIRGFIEQQITLIAKGQVDHVLVVQHAMRQFT 189

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
             KF YF   I  MD+LFEAQFSPLADSGR+LSKCGKC RYMKYISV+P+RLYC  CEEV+
Sbjct: 190  QKFSYFVEHIADMDALFEAQFSPLADSGRLLSKCGKCVRYMKYISVQPARLYCGACEEVY 249

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGELSL 737
             LPQ GT+KLYKEL CPLDN+ELVLF L GPD K+           PFE IG   G L  
Sbjct: 250  YLPQKGTVKLYKELACPLDNFELVLFSLSGPDAKSFPLCPYCYNNPPFEGIGTLYGSLGP 309

Query: 736  GRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCLVY 557
            GR  +  GMPC+ C HPTC HSMI QGVCACPECDGTLVLDP SAPKWRL CN C+CLV 
Sbjct: 310  GRSGKGAGMPCNLCPHPTCRHSMITQGVCACPECDGTLVLDPVSAPKWRLYCNLCNCLVS 369

Query: 556  LPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMITMKHG 377
            LP  +Y+I+TT+E C +CESTL+E++FNK  TPL NG TL++GCILCDE LHS++ MKHG
Sbjct: 370  LPHGAYRIATTQERCVECESTLIEIDFNKKTTPLSNGETLHRGCILCDERLHSLVEMKHG 429

Query: 376  KSFPXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            KSF                          +EDPKMSFRDF
Sbjct: 430  KSF-FRGRGRGRGRGRGRGRGRGRGRGGKHEDPKMSFRDF 468


>gb|EXB54788.1| DNA topoisomerase 3-beta-1 [Morus notabilis]
          Length = 641

 Score =  443 bits (1139), Expect = e-122
 Identities = 212/344 (61%), Positives = 251/344 (72%), Gaps = 4/344 (1%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            +GR+L+PT LGITLIRGYQCID DLCLP+IR FIE Q+TL+AKG  DH  V++H LQQF 
Sbjct: 298  AGRKLVPTPLGITLIRGYQCIDPDLCLPDIRSFIEQQLTLVAKGQADHICVLQHVLQQFK 357

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
             KF YF  QI+KMD+LFEAQFSP+A+SGR+LSKCGKC RYMKYIS +PSRLYC+TCEE++
Sbjct: 358  QKFSYFVKQIDKMDALFEAQFSPVANSGRVLSKCGKCLRYMKYISSQPSRLYCNTCEEIY 417

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGELSL 737
             LPQ GTIKLYKEL CPLDN+EL++F  PGP+GK+           PFE I    G    
Sbjct: 418  YLPQKGTIKLYKELTCPLDNFELLIFSRPGPEGKSFPLCPYCYNTPPFEGIDTLFGGAKT 477

Query: 736  GRGNR---SLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSC 566
            G  N+    +GMPCS C HPTC HSMI QGVCACPEC GTLVLDP SAPKWRL+CN C+C
Sbjct: 478  GSLNKLGEGVGMPCSLCPHPTCQHSMITQGVCACPECSGTLVLDPVSAPKWRLNCNTCNC 537

Query: 565  LVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMITM 386
            LV+LPQ +++ISTT + C DC+ST++EV+FNK  TPL++G TLY GCILCDE LHS++ M
Sbjct: 538  LVFLPQGAHRISTTRDQCPDCDSTIIEVDFNKKTTPLEDGATLYTGCILCDEFLHSLLEM 597

Query: 385  KHGKSF-PXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            KHGKSF                             DPKMSFRDF
Sbjct: 598  KHGKSFFRRLSSRGRGRGTGRDGPRGRGRGTGKWVDPKMSFRDF 641


>ref|XP_001785468.1| predicted protein [Physcomitrella patens] gi|162662910|gb|EDQ49709.1|
            predicted protein [Physcomitrella patens]
          Length = 869

 Score =  439 bits (1128), Expect = e-120
 Identities = 215/345 (62%), Positives = 252/345 (73%), Gaps = 5/345 (1%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            SGR+L+PT LGITL+RGYQ ID DLCLP+IR FIE QITLIAKG  +++RVV+H LQ+F+
Sbjct: 525  SGRRLVPTPLGITLVRGYQVIDVDLCLPDIRAFIEKQITLIAKGQAEYSRVVRHVLQEFA 584

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
            AKF YF  QIE MD+LFEAQFSPLADSG+ LSKCGKC RYMKYI++RPSRLYC +CEEVH
Sbjct: 585  AKFAYFVAQIEIMDTLFEAQFSPLADSGKPLSKCGKCLRYMKYIAMRPSRLYCPSCEEVH 644

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGELSL 737
             LPQNG IKLYKE+ CPLDN+ELVLF L GPDGK+           PFE      G +  
Sbjct: 645  ALPQNGHIKLYKEITCPLDNFELVLFSLAGPDGKSYPLCPYCYNNPPFEGAEKLFGGVGF 704

Query: 736  ----GRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCS 569
                G+     GMPC+ C HPTC +SMI+QGVCACPECDGTLVLDP SAPKWRLDCNKCS
Sbjct: 705  SKEPGKHVGKGGMPCTLCPHPTCRNSMIQQGVCACPECDGTLVLDPVSAPKWRLDCNKCS 764

Query: 568  CLVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMIT 389
             LVYLP N++KI+  +E C +C S LLEVNFNKN+TPL NG TL+K C+LCDELL+S++ 
Sbjct: 765  NLVYLPHNAHKIAVCQERCEECGSALLEVNFNKNSTPLSNGATLHKACLLCDELLYSLVE 824

Query: 388  MKHGKSF-PXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            +KHG+SF                            EDP+MSFRDF
Sbjct: 825  VKHGRSFFSRSGRGRGRGRGRGRGRRGRGRSRGRGEDPRMSFRDF 869


>ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Solanum lycopersicum]
          Length = 864

 Score =  437 bits (1123), Expect = e-120
 Identities = 206/343 (60%), Positives = 250/343 (72%), Gaps = 3/343 (0%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            +GR+L PT LGI+LIRGYQCID DLCLP+IR FIE+QITL+AKG  DH+ VV+H L+QF 
Sbjct: 522  AGRRLAPTPLGISLIRGYQCIDSDLCLPDIRSFIEHQITLVAKGQADHSMVVQHVLEQFR 581

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
             KF YF  QI+ MD+LFEAQFSPL+DSGR+LSKCGKC RYMKYIS +P+RLYC TCEEV+
Sbjct: 582  RKFSYFVKQIDNMDALFEAQFSPLSDSGRLLSKCGKCLRYMKYISTQPARLYCGTCEEVY 641

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGELSL 737
             +PQ GT+KLYKEL CPLDN+EL+L  +PGP+GK+           PFE I    G    
Sbjct: 642  YVPQKGTVKLYKELTCPLDNFELLLCSMPGPEGKSFPLCPYCFNCPPFEGIDTFFGAPKT 701

Query: 736  G---RGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSC 566
            G   +  + +GMPC  C H TCPHS+I QGVCACPEC GTLVLDP SAPKWRL CN C+C
Sbjct: 702  GDSTKLGKGVGMPCFLCPHTTCPHSVIAQGVCACPECSGTLVLDPVSAPKWRLYCNTCNC 761

Query: 565  LVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMITM 386
            LV LP+ +++ISTT+E C +C+ST++EV+FNK  TPL +G TL+KGCILCDELLHS++ M
Sbjct: 762  LVSLPEGAHRISTTQEKCPECDSTIIEVDFNKKTTPLKDGATLHKGCILCDELLHSLVEM 821

Query: 385  KHGKSFPXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            KHG+SF                           +DPKMSFRDF
Sbjct: 822  KHGRSFSRHGRRGRGRGRGRGGYRGRGRGSNKQQDPKMSFRDF 864


>gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao]
          Length = 868

 Score =  436 bits (1121), Expect = e-119
 Identities = 208/343 (60%), Positives = 248/343 (72%), Gaps = 4/343 (1%)
 Frame = -2

Query: 1273 GRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFSA 1094
            GR+L+PT LGITLIRGYQCID DLCLP+IR FIE+QITL+AKG  +H+ VV+H LQQF  
Sbjct: 526  GRKLVPTALGITLIRGYQCIDPDLCLPDIRSFIEHQITLVAKGQANHSHVVQHVLQQFKQ 585

Query: 1093 KFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVHT 914
            KF YF  QIE MD+LFEAQFSPLADSGR LSKCGKC RYMKYIS +P RL+C TCEEV+ 
Sbjct: 586  KFSYFVQQIENMDALFEAQFSPLADSGRALSKCGKCLRYMKYISTQPPRLFCGTCEEVYH 645

Query: 913  LPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGEL--- 743
            LPQ GTIKLYKEL CPLDN+EL++F +PGP+GK+           PFE +    G     
Sbjct: 646  LPQKGTIKLYKELTCPLDNFELLIFSMPGPEGKSFPLCPYCYNSPPFEGMDTLFGATRIG 705

Query: 742  SLGRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSCL 563
            S G+  +  GMPC  C HPTC HS++ QGVCACPEC GTLVLDP SAPKWRL CNKC+CL
Sbjct: 706  SSGKLGKGAGMPCFLCPHPTCRHSVVAQGVCACPECSGTLVLDPVSAPKWRLYCNKCNCL 765

Query: 562  VYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMITMK 383
            V LP+ +++I+TT E C +C+ST++EV+FNK  TPL++G TL+ GCILCDELLHS + +K
Sbjct: 766  VLLPEGAHRIATTRERCAECDSTIIEVDFNKKTTPLEDGATLHTGCILCDELLHSFVEVK 825

Query: 382  HGKSFPXXXXXXXXXXXXXXXXXXXXXXXXXNE-DPKMSFRDF 257
            HGKSF                           + DPKMSFRDF
Sbjct: 826  HGKSFSRGLGGRGRGRGTRRGGYRGRGRAAGKQVDPKMSFRDF 868


>gb|EMJ26496.1| hypothetical protein PRUPE_ppa001274mg [Prunus persica]
          Length = 866

 Score =  436 bits (1120), Expect = e-119
 Identities = 213/344 (61%), Positives = 249/344 (72%), Gaps = 4/344 (1%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            +GR+L PT LGITLIRGYQCID DLCLP+IR FIE QITL+AKG  DH RVV+H LQQF 
Sbjct: 523  AGRKLGPTALGITLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADHFRVVQHVLQQFR 582

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
             K+ YF  QIE MD+LFEAQFSPLADSGR+LSKCGKC RYMK+IS +PSRLYC+TCEEV+
Sbjct: 583  QKYSYFVKQIENMDALFEAQFSPLADSGRVLSKCGKCLRYMKHISTQPSRLYCNTCEEVY 642

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGELSL 737
             LPQ G+IKLYKEL CPLDN+EL++F +PGPDGK+           PFE I    G +  
Sbjct: 643  YLPQKGSIKLYKELTCPLDNFELLIFSMPGPDGKSFPLCPYCYNSPPFEGIDTLFGAVKS 702

Query: 736  GRGN---RSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSC 566
            G  +   +  GMPC  C HPTC HS+I QGVCACPEC GTLVLDP SAPKWRL CN C+ 
Sbjct: 703  GPSSQLGKGAGMPCFLCPHPTCRHSLIAQGVCACPECSGTLVLDPVSAPKWRLCCNMCNF 762

Query: 565  LVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMITM 386
            LV LP+ +++ISTT E C +C+ST+LEV+FNK  TPL+NG TLY GCILCDELLHS++ M
Sbjct: 763  LVLLPEGAHQISTTRERCPECDSTILEVDFNKKTTPLENGETLYTGCILCDELLHSLVEM 822

Query: 385  KHGKSFPXXXXXXXXXXXXXXXXXXXXXXXXXNE-DPKMSFRDF 257
            K+GKSF                           + DPKMSFRDF
Sbjct: 823  KYGKSFFKRLGGRGRGRGSRRGGYRGRGRGTGKKVDPKMSFRDF 866


>ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Fragaria vesca subsp.
            vesca]
          Length = 862

 Score =  435 bits (1119), Expect = e-119
 Identities = 212/343 (61%), Positives = 248/343 (72%), Gaps = 3/343 (0%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            +GR+L+PT LGITLIRGYQCID DLCLP+IR FIE QITL+AKG  DH RVV+H LQQF 
Sbjct: 523  AGRKLVPTALGITLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADHFRVVQHVLQQFR 582

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
             K+ YF  QIE MD+LFEAQFSPLADSGR+LSKCGKC RYMK+IS +PSRLYC+TCEEV+
Sbjct: 583  QKYSYFVKQIENMDALFEAQFSPLADSGRVLSKCGKCLRYMKHISTQPSRLYCNTCEEVY 642

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGEL-- 743
             LPQ GTIKLYKEL CPLDN+EL++  +PGPDGK+           PFE I    G    
Sbjct: 643  YLPQKGTIKLYKELTCPLDNFELLICSMPGPDGKSFSLCPYCYNSPPFEGINTLFGAAKS 702

Query: 742  -SLGRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSC 566
             S G+  +  GMPC  C HPTC HS+I QGVCACPEC GTLVLDP SAPKWRL CN C+ 
Sbjct: 703  GSSGKLGKGAGMPCFLCPHPTCRHSLITQGVCACPECTGTLVLDPVSAPKWRLCCNMCNF 762

Query: 565  LVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMITM 386
            LV LPQ +++ISTT + C +C+ST++EV+FNK  TPL++G TLY GCILCDELLHS++ M
Sbjct: 763  LVLLPQGAHQISTTPDRCPECDSTIIEVDFNKKTTPLEDGATLYSGCILCDELLHSLVEM 822

Query: 385  KHGKSFPXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            K+GKSF                            DPKMSFRDF
Sbjct: 823  KYGKSF---FRGSRGRGRGSRRGRGRGRGTGKMVDPKMSFRDF 862


>ref|XP_002321105.1| DNA topoisomerase family protein [Populus trichocarpa]
            gi|222861878|gb|EEE99420.1| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 837

 Score =  434 bits (1117), Expect = e-119
 Identities = 209/343 (60%), Positives = 247/343 (72%), Gaps = 3/343 (0%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            +GR+L+PT LGITLIRGYQCID DLCLP+IRGFIE QITL+AKG+ DH+ VV+H L+QF 
Sbjct: 497  AGRKLVPTALGITLIRGYQCIDPDLCLPDIRGFIEQQITLVAKGEADHSCVVQHVLEQFK 556

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
             K+ YF  QI+ MD+LFEAQFSPLADSGR  SKCGKC RYMKYIS +PSRLYC TCEEV+
Sbjct: 557  RKYSYFVKQIDNMDALFEAQFSPLADSGRAFSKCGKCLRYMKYISSQPSRLYCGTCEEVY 616

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGELSL 737
             LPQ GTIKLYKEL CPLDN+EL++F + GP+GK+           PFE I    G    
Sbjct: 617  YLPQKGTIKLYKELTCPLDNFELLIFAMAGPEGKSFPLCPLCYNSPPFEGIDALFGASKT 676

Query: 736  GRG---NRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSC 566
            G      +  GMPC  C HPTC HS+I QGVCACPEC+GTLVLDP SAPKWRL CN C+C
Sbjct: 677  GSSGMLGKGAGMPCFLCPHPTCRHSLIAQGVCACPECNGTLVLDPISAPKWRLYCNMCNC 736

Query: 565  LVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMITM 386
            LV LPQ +++ISTT E C +C+ST++EV+FNKN TPL++G TL+ GCILCD LLHS++ +
Sbjct: 737  LVLLPQGAHRISTTREQCPECDSTIIEVDFNKNTTPLEDGATLHVGCILCDNLLHSLVEV 796

Query: 385  KHGKSFPXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            KHGKSF                            DPKMSFRDF
Sbjct: 797  KHGKSF--FKRAGKWARARGRGAYRGRGRGLGKMDPKMSFRDF 837


>gb|EEE69993.1| hypothetical protein OsJ_29901 [Oryza sativa Japonica Group]
          Length = 729

 Score =  434 bits (1117), Expect = e-119
 Identities = 211/345 (61%), Positives = 250/345 (72%), Gaps = 4/345 (1%)
 Frame = -2

Query: 1279 HSGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQF 1100
            +SGR+L+PT LG TLIRGYQCID DLCLP+IR FIE QITLIAKG+ DH +VV+H LQQF
Sbjct: 385  NSGRRLVPTPLGTTLIRGYQCIDADLCLPDIRRFIEQQITLIAKGEADHLQVVQHVLQQF 444

Query: 1099 SAKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEV 920
              K+ YF  +IE MD+LFEAQFSPLADSGR+LSKCGKC RYMKYIS +P RLYC TCEEV
Sbjct: 445  MKKYSYFVKKIENMDALFEAQFSPLADSGRLLSKCGKCARYMKYISTQPMRLYCVTCEEV 504

Query: 919  HTLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGELS 740
            + LPQNG+IKLYKE++CPLD +EL+LF + GPD K+           PFE I    G L 
Sbjct: 505  YYLPQNGSIKLYKEIICPLDGFELLLFSMVGPDAKSFPLCPFCYNSPPFEGIDKLFGALK 564

Query: 739  L---GRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCS 569
            L   G+  +  GMPC  C HPTC  SMI QGVCACPEC GTL+LDP SAPKWRL CN+C+
Sbjct: 565  LDDTGKVGKGAGMPCFLCLHPTCKQSMITQGVCACPECTGTLILDPVSAPKWRLYCNRCN 624

Query: 568  CLVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMIT 389
            C+V LP  ++KISTT++ C  CEST++EV+FNK  TPL +G TL++GCILCDELLHS+I 
Sbjct: 625  CIVLLPHAAHKISTTDKKCPTCESTIIEVDFNKKTTPLKDGATLHEGCILCDELLHSLIE 684

Query: 388  MKHGKS-FPXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            MKHGKS F                          ++DPKMSFRDF
Sbjct: 685  MKHGKSFFMRRGRGRGRGRGRGRGSSRGRRGSSRHDDPKMSFRDF 729


>gb|EEC84829.1| hypothetical protein OsI_31918 [Oryza sativa Indica Group]
          Length = 866

 Score =  434 bits (1117), Expect = e-119
 Identities = 211/345 (61%), Positives = 250/345 (72%), Gaps = 4/345 (1%)
 Frame = -2

Query: 1279 HSGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQF 1100
            +SGR+L+PT LG TLIRGYQCID DLCLP+IR FIE QITLIAKG+ DH +VV+H LQQF
Sbjct: 522  NSGRRLVPTPLGTTLIRGYQCIDADLCLPDIRRFIEQQITLIAKGEADHLQVVQHVLQQF 581

Query: 1099 SAKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEV 920
              K+ YF  +IE MD+LFEAQFSPLADSGR+LSKCGKC RYMKYIS +P RLYC TCEEV
Sbjct: 582  MKKYSYFVKKIENMDALFEAQFSPLADSGRLLSKCGKCARYMKYISTQPMRLYCVTCEEV 641

Query: 919  HTLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGELS 740
            + LPQNG+IKLYKE++CPLD +EL+LF + GPD K+           PFE I    G L 
Sbjct: 642  YYLPQNGSIKLYKEIICPLDGFELLLFSMVGPDAKSFPLCPFCYNSPPFEGIDKLFGALK 701

Query: 739  L---GRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCS 569
            L   G+  +  GMPC  C HPTC  SMI QGVCACPEC GTL+LDP SAPKWRL CN+C+
Sbjct: 702  LDDTGKVGKGAGMPCFLCLHPTCKQSMITQGVCACPECTGTLILDPVSAPKWRLYCNRCN 761

Query: 568  CLVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMIT 389
            C+V LP  ++KISTT++ C  CEST++EV+FNK  TPL +G TL++GCILCDELLHS+I 
Sbjct: 762  CIVLLPHAAHKISTTDKKCPTCESTIIEVDFNKKTTPLKDGATLHEGCILCDELLHSLIE 821

Query: 388  MKHGKS-FPXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            MKHGKS F                          ++DPKMSFRDF
Sbjct: 822  MKHGKSFFMRRGRGRGRGRGRGRGSSRGRRGSSRHDDPKMSFRDF 866


>ref|NP_001063578.1| Os09g0500600 [Oryza sativa Japonica Group]
            gi|113631811|dbj|BAF25492.1| Os09g0500600 [Oryza sativa
            Japonica Group] gi|215695029|dbj|BAG90220.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 866

 Score =  434 bits (1117), Expect = e-119
 Identities = 211/345 (61%), Positives = 250/345 (72%), Gaps = 4/345 (1%)
 Frame = -2

Query: 1279 HSGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQF 1100
            +SGR+L+PT LG TLIRGYQCID DLCLP+IR FIE QITLIAKG+ DH +VV+H LQQF
Sbjct: 522  NSGRRLVPTPLGTTLIRGYQCIDADLCLPDIRRFIEQQITLIAKGEADHLQVVQHVLQQF 581

Query: 1099 SAKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEV 920
              K+ YF  +IE MD+LFEAQFSPLADSGR+LSKCGKC RYMKYIS +P RLYC TCEEV
Sbjct: 582  MKKYSYFVKKIENMDALFEAQFSPLADSGRLLSKCGKCARYMKYISTQPMRLYCVTCEEV 641

Query: 919  HTLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGELS 740
            + LPQNG+IKLYKE++CPLD +EL+LF + GPD K+           PFE I    G L 
Sbjct: 642  YYLPQNGSIKLYKEIICPLDGFELLLFSMVGPDAKSFPLCPFCYNSPPFEGIDKLFGALK 701

Query: 739  L---GRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCS 569
            L   G+  +  GMPC  C HPTC  SMI QGVCACPEC GTL+LDP SAPKWRL CN+C+
Sbjct: 702  LDDTGKVGKGAGMPCFLCLHPTCKQSMITQGVCACPECTGTLILDPVSAPKWRLYCNRCN 761

Query: 568  CLVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMIT 389
            C+V LP  ++KISTT++ C  CEST++EV+FNK  TPL +G TL++GCILCDELLHS+I 
Sbjct: 762  CIVLLPHAAHKISTTDKKCPTCESTIIEVDFNKKTTPLKDGATLHEGCILCDELLHSLIE 821

Query: 388  MKHGKS-FPXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            MKHGKS F                          ++DPKMSFRDF
Sbjct: 822  MKHGKSFFMRRGRGRGRGRGRGRGSSRGRRGSSRHDDPKMSFRDF 866


>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223544485|gb|EEF46004.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 865

 Score =  433 bits (1114), Expect = e-119
 Identities = 208/343 (60%), Positives = 246/343 (71%), Gaps = 3/343 (0%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            +GR+L PT+LGITLIRGYQCID DLCLP+IR FIE QITL+AKG  DH+RVV+H LQQF 
Sbjct: 524  AGRRLAPTILGITLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADHSRVVQHVLQQFK 583

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
             KF YF  QI+ MD+LFEAQFS L DSGR LSKCGKC RYMKYIS +P RLYC TCEEV+
Sbjct: 584  QKFTYFVKQIDNMDALFEAQFSQLVDSGRALSKCGKCLRYMKYISTQPPRLYCGTCEEVY 643

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGEL-- 743
             LPQ GTIKLYKEL CPLDN+EL++F + GP+GKT           PFE +    G    
Sbjct: 644  YLPQKGTIKLYKELTCPLDNFELLIFSMAGPEGKTFPLCPYCYNNPPFEGVDTLFGASKN 703

Query: 742  -SLGRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSC 566
             + G+  +  GMPC  C HPTC HS+I QGVCACPEC GTLVLDP SAPKWRL CN C+C
Sbjct: 704  GNFGKLGKGAGMPCFLCPHPTCRHSLIAQGVCACPECSGTLVLDPVSAPKWRLYCNMCNC 763

Query: 565  LVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMITM 386
            LV LPQ +++I+TT E C +C+ST++EV+FNKN TPL++G TL+ GCILCD+LLHS++ +
Sbjct: 764  LVLLPQGAHRIATTRERCPECDSTIIEVDFNKNTTPLEDGATLHIGCILCDDLLHSLVEV 823

Query: 385  KHGKSFPXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            KHGKSF                            DPKMSFRDF
Sbjct: 824  KHGKSF-FKRLGAGRRGRGAGRGRGRGRSSGRRGDPKMSFRDF 865


>ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
          Length = 864

 Score =  432 bits (1112), Expect = e-118
 Identities = 205/344 (59%), Positives = 248/344 (72%), Gaps = 4/344 (1%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            +GR+L+PT LGITLIRGYQCID DLCLP+IR FIE+QITL+AKG  DH+ VV+  LQQF 
Sbjct: 521  AGRRLVPTNLGITLIRGYQCIDPDLCLPDIRSFIEHQITLVAKGQADHSSVVQSVLQQFR 580

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
             K+ YF  +I+ MD+LFEAQFSPLADSGR LSKCGKC RYMK+IS +P RLYC  CEEV+
Sbjct: 581  QKYSYFVKKIDHMDALFEAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVY 640

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLG---- 749
             LPQ GTIKLYKEL CPLDN+EL+++ LPGP+GK+           PFE I    G    
Sbjct: 641  YLPQKGTIKLYKELTCPLDNFELLIYSLPGPEGKSFPLCPYCYNSPPFEGINTLYGASKA 700

Query: 748  ELSLGRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCS 569
              S G  ++ +GMPC  C HPTC HS+I QGVCACPEC GTLVLDP SAP W+L+CNKC+
Sbjct: 701  NPSSGTSSKGMGMPCFMCPHPTCRHSLITQGVCACPECSGTLVLDPVSAPNWKLNCNKCN 760

Query: 568  CLVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMIT 389
            CLV+LP+ +++ISTT + C DC+ST++EV+FNK  TPL++G TL+ GCILCDE LHS++ 
Sbjct: 761  CLVFLPKGAHRISTTRDKCADCDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLE 820

Query: 388  MKHGKSFPXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            MKHGKSF                            DPKMSFRDF
Sbjct: 821  MKHGKSFIRNRGSRGRGRGRGRGRGGRGRGSGKPMDPKMSFRDF 864


>ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
          Length = 867

 Score =  432 bits (1112), Expect = e-118
 Identities = 205/344 (59%), Positives = 248/344 (72%), Gaps = 4/344 (1%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            +GR+L+PT LGITLIRGYQCID DLCLP+IR FIE+QITL+AKG  DH+ VV+  LQQF 
Sbjct: 524  AGRRLVPTNLGITLIRGYQCIDPDLCLPDIRSFIEHQITLVAKGQADHSSVVQSVLQQFR 583

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
             K+ YF  +I+ MD+LFEAQFSPLADSGR LSKCGKC RYMK+IS +P RLYC  CEEV+
Sbjct: 584  QKYSYFVKKIDHMDALFEAQFSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVY 643

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLG---- 749
             LPQ GTIKLYKEL CPLDN+EL+++ LPGP+GK+           PFE I    G    
Sbjct: 644  YLPQKGTIKLYKELTCPLDNFELLIYSLPGPEGKSFPLCPYCYNSPPFEGINTLYGASKA 703

Query: 748  ELSLGRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCS 569
              S G  ++ +GMPC  C HPTC HS+I QGVCACPEC GTLVLDP SAP W+L+CNKC+
Sbjct: 704  NPSSGTSSKGMGMPCFMCPHPTCRHSLITQGVCACPECSGTLVLDPVSAPNWKLNCNKCN 763

Query: 568  CLVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMIT 389
            CLV+LP+ +++ISTT + C DC+ST++EV+FNK  TPL++G TL+ GCILCDE LHS++ 
Sbjct: 764  CLVFLPKGAHRISTTRDKCADCDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLE 823

Query: 388  MKHGKSFPXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            MKHGKSF                            DPKMSFRDF
Sbjct: 824  MKHGKSFIRNRGSRGRGRGRGRGRGGRGRSSGKPMDPKMSFRDF 867


>ref|XP_006358794.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X2 [Solanum
            tuberosum]
          Length = 801

 Score =  431 bits (1109), Expect = e-118
 Identities = 205/343 (59%), Positives = 250/343 (72%), Gaps = 3/343 (0%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            +GR+L PT LGI+LIRGYQCID DLCLP+IR FIE+QITL+AKG  DH+ VV+H L+QF 
Sbjct: 463  AGRRLAPTPLGISLIRGYQCIDSDLCLPDIRSFIEHQITLVAKGQADHSMVVQHVLEQFR 522

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
             KF YF  QI+ MD+LFEAQFSPL+DSGR+LSKCGKC RYMKYIS +P+RLYC TCEEV+
Sbjct: 523  RKFSYFVKQIDNMDALFEAQFSPLSDSGRLLSKCGKCLRYMKYISTQPARLYCGTCEEVY 582

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGELSL 737
             +PQ GT+KLYKEL CPLDN+EL+L  +PGP+GK+           PFE I    G    
Sbjct: 583  YVPQKGTVKLYKELTCPLDNFELLLCSMPGPEGKSFPLCPYCFNCPPFEGIDTFFGAPKT 642

Query: 736  G---RGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSC 566
            G   +  + +GMPC  C H TCPHS+I QGVCACPEC GTLVLDP SAPKWRL CN C+C
Sbjct: 643  GDSTKLGKGVGMPCFLCPHTTCPHSVIAQGVCACPECSGTLVLDPVSAPKWRLYCNMCNC 702

Query: 565  LVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMITM 386
            LV LP+ +++ISTT++ C +C+ST++EV+FNK  TPL +G TL+KGCILCDELLHS++ M
Sbjct: 703  LVSLPEGAHRISTTQDKCPECDSTIIEVDFNKKTTPLKDGATLHKGCILCDELLHSLVEM 762

Query: 385  KHGKSFPXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            KHG+SF                           +DPKMSFRDF
Sbjct: 763  KHGRSF----SRHGRRGRGRGRGRGRGRGSTKQQDPKMSFRDF 801


>ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Solanum
            tuberosum]
          Length = 860

 Score =  431 bits (1109), Expect = e-118
 Identities = 205/343 (59%), Positives = 250/343 (72%), Gaps = 3/343 (0%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            +GR+L PT LGI+LIRGYQCID DLCLP+IR FIE+QITL+AKG  DH+ VV+H L+QF 
Sbjct: 522  AGRRLAPTPLGISLIRGYQCIDSDLCLPDIRSFIEHQITLVAKGQADHSMVVQHVLEQFR 581

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
             KF YF  QI+ MD+LFEAQFSPL+DSGR+LSKCGKC RYMKYIS +P+RLYC TCEEV+
Sbjct: 582  RKFSYFVKQIDNMDALFEAQFSPLSDSGRLLSKCGKCLRYMKYISTQPARLYCGTCEEVY 641

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGELSL 737
             +PQ GT+KLYKEL CPLDN+EL+L  +PGP+GK+           PFE I    G    
Sbjct: 642  YVPQKGTVKLYKELTCPLDNFELLLCSMPGPEGKSFPLCPYCFNCPPFEGIDTFFGAPKT 701

Query: 736  G---RGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSC 566
            G   +  + +GMPC  C H TCPHS+I QGVCACPEC GTLVLDP SAPKWRL CN C+C
Sbjct: 702  GDSTKLGKGVGMPCFLCPHTTCPHSVIAQGVCACPECSGTLVLDPVSAPKWRLYCNMCNC 761

Query: 565  LVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMITM 386
            LV LP+ +++ISTT++ C +C+ST++EV+FNK  TPL +G TL+KGCILCDELLHS++ M
Sbjct: 762  LVSLPEGAHRISTTQDKCPECDSTIIEVDFNKKTTPLKDGATLHKGCILCDELLHSLVEM 821

Query: 385  KHGKSFPXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            KHG+SF                           +DPKMSFRDF
Sbjct: 822  KHGRSF----SRHGRRGRGRGRGRGRGRGSTKQQDPKMSFRDF 860


>ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X3 [Citrus
            sinensis]
          Length = 867

 Score =  431 bits (1108), Expect = e-118
 Identities = 208/344 (60%), Positives = 248/344 (72%), Gaps = 4/344 (1%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            +GR+L PT LGITLIRGYQCID DLCLP+IR FIE QITL+AKG  DH+ VV+H LQQF 
Sbjct: 524  AGRKLAPTTLGITLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADHSGVVQHVLQQFR 583

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
             K+ YF  QIE MD+LFEAQFSPL++SGR+LSKCGKC RYMKYIS++PSRLYCSTCE+V+
Sbjct: 584  QKYSYFVKQIENMDALFEAQFSPLSNSGRVLSKCGKCLRYMKYISMQPSRLYCSTCEDVY 643

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGEL-- 743
             LPQ GT+KLYKEL CPLDN+EL++F + GP+GK+           PFE I    G    
Sbjct: 644  NLPQRGTLKLYKELTCPLDNFELLIFSMAGPEGKSFPLCPFCYNNPPFEGIDTLYGTTTT 703

Query: 742  -SLGRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSC 566
             S G+  +  GMPC  C HP C HSMI QGVCACPEC+GTLVLDP SAPKWRL CN C+C
Sbjct: 704  GSFGKLGKGAGMPCFLCPHPACRHSMIAQGVCACPECNGTLVLDPVSAPKWRLYCNMCNC 763

Query: 565  LVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMITM 386
            LV LPQ +++I+TT+E C +C S ++E++FNK  TPLD+G TL+ GCILCDELLHS+I +
Sbjct: 764  LVSLPQGAHRIATTQEQCPECGSKIIEIDFNKKTTPLDDGATLHTGCILCDELLHSLIEV 823

Query: 385  KHGKSF-PXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            KHGKSF                             DPKMSFRDF
Sbjct: 824  KHGKSFFKRLGGRGRGRGAGRGAFKGRGWGTGKGVDPKMSFRDF 867


>ref|XP_006492982.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Citrus
            sinensis] gi|568880120|ref|XP_006492983.1| PREDICTED: DNA
            topoisomerase 3-beta-1-like isoform X2 [Citrus sinensis]
          Length = 898

 Score =  431 bits (1108), Expect = e-118
 Identities = 208/344 (60%), Positives = 248/344 (72%), Gaps = 4/344 (1%)
 Frame = -2

Query: 1276 SGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQFS 1097
            +GR+L PT LGITLIRGYQCID DLCLP+IR FIE QITL+AKG  DH+ VV+H LQQF 
Sbjct: 555  AGRKLAPTTLGITLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADHSGVVQHVLQQFR 614

Query: 1096 AKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEVH 917
             K+ YF  QIE MD+LFEAQFSPL++SGR+LSKCGKC RYMKYIS++PSRLYCSTCE+V+
Sbjct: 615  QKYSYFVKQIENMDALFEAQFSPLSNSGRVLSKCGKCLRYMKYISMQPSRLYCSTCEDVY 674

Query: 916  TLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGEL-- 743
             LPQ GT+KLYKEL CPLDN+EL++F + GP+GK+           PFE I    G    
Sbjct: 675  NLPQRGTLKLYKELTCPLDNFELLIFSMAGPEGKSFPLCPFCYNNPPFEGIDTLYGTTTT 734

Query: 742  -SLGRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCSC 566
             S G+  +  GMPC  C HP C HSMI QGVCACPEC+GTLVLDP SAPKWRL CN C+C
Sbjct: 735  GSFGKLGKGAGMPCFLCPHPACRHSMIAQGVCACPECNGTLVLDPVSAPKWRLYCNMCNC 794

Query: 565  LVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMITM 386
            LV LPQ +++I+TT+E C +C S ++E++FNK  TPLD+G TL+ GCILCDELLHS+I +
Sbjct: 795  LVSLPQGAHRIATTQEQCPECGSKIIEIDFNKKTTPLDDGATLHTGCILCDELLHSLIEV 854

Query: 385  KHGKSF-PXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            KHGKSF                             DPKMSFRDF
Sbjct: 855  KHGKSFFKRLGGRGRGRGAGRGAFKGRGWGTGKGVDPKMSFRDF 898


>ref|XP_003578369.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Brachypodium distachyon]
          Length = 868

 Score =  431 bits (1108), Expect = e-118
 Identities = 206/347 (59%), Positives = 250/347 (72%), Gaps = 6/347 (1%)
 Frame = -2

Query: 1279 HSGRQLIPTVLGITLIRGYQCIDGDLCLPEIRGFIENQITLIAKGDIDHARVVKHALQQF 1100
            +SGR+L+PT LG TLIRGYQCID DLCLP+IR FIE QITLIAKG  DH +V++H +QQF
Sbjct: 522  NSGRRLVPTALGTTLIRGYQCIDADLCLPDIRSFIEQQITLIAKGKADHLQVIQHVIQQF 581

Query: 1099 SAKFMYFTTQIEKMDSLFEAQFSPLADSGRMLSKCGKCNRYMKYISVRPSRLYCSTCEEV 920
              K+ YF  +IE MD+LFEAQFSPLADSGR+LSKCGKC RYMKYIS +P R+YC TCEEV
Sbjct: 582  MKKYSYFVKKIENMDALFEAQFSPLADSGRLLSKCGKCGRYMKYISTQPMRMYCITCEEV 641

Query: 919  HTLPQNGTIKLYKELVCPLDNYELVLFCLPGPDGKTXXXXXXXXXXXPFEEIGNQLGELS 740
            + LPQNGTIKLYKE++CPLD +EL+LF + GPD K+           PFE I    G + 
Sbjct: 642  YYLPQNGTIKLYKEIICPLDGFELLLFSMVGPDAKSFPLCPCCYNSPPFEGIDKLFGAIK 701

Query: 739  L---GRGNRSLGMPCSSCRHPTCPHSMIKQGVCACPECDGTLVLDPTSAPKWRLDCNKCS 569
            L   G+  +  GMPC  C HPTC  SMI QGVCACPEC GTL+LDP SAPKWRL CN C+
Sbjct: 702  LDDTGKLGKGAGMPCFLCPHPTCKQSMITQGVCACPECSGTLILDPVSAPKWRLLCNMCN 761

Query: 568  CLVYLPQNSYKISTTEEHCNDCESTLLEVNFNKNNTPLDNGTTLYKGCILCDELLHSMIT 389
            C+V LP  +++I+TT++ C+ CEST++EV+FNK  TPL++G TL++GCILCDELLHS+I 
Sbjct: 762  CVVLLPHAAHRITTTDKKCSTCESTIIEVDFNKKATPLEDGATLHEGCILCDELLHSLIE 821

Query: 388  MKHGKSF---PXXXXXXXXXXXXXXXXXXXXXXXXXNEDPKMSFRDF 257
            MKHGKSF                             ++DPKMSFRDF
Sbjct: 822  MKHGKSFFMRRGRGRGRGRARGRGGSRGRGRRGNSRHDDPKMSFRDF 868