BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00009612
         (1105 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006857525.1| hypothetical protein AMTR_s00061p00026580, p...   223   1e-55
ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|A...   219   2e-54
emb|CBI28783.3| unnamed protein product [Vitis vinifera]              211   3e-52
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v...   211   3e-52
ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [S...   211   4e-52
ref|XP_006856202.1| hypothetical protein AMTR_s00059p00193620 [A...   210   9e-52
gb|AFW61219.1| DNA topoisomerase I [Zea mays]                         207   5e-51
gb|AFW61218.1| hypothetical protein ZEAMMB73_011101 [Zea mays]        207   5e-51
ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like isoform ...   207   6e-51
ref|XP_004972821.1| PREDICTED: DNA topoisomerase 1-like isoform ...   207   6e-51
ref|XP_004972820.1| PREDICTED: DNA topoisomerase 1-like isoform ...   207   6e-51
gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [The...   207   8e-51
gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma ca...   207   8e-51
gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma ca...   207   8e-51
gb|ACL52396.1| unknown [Zea mays]                                     206   1e-50
gb|EMS46223.1| DNA topoisomerase 1 [Triticum urartu]                  205   2e-50
gb|EMT20272.1| DNA topoisomerase 1 [Aegilops tauschii]                203   9e-50
ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group] g...   202   2e-49
ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza b...   201   4e-49
gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indi...   200   7e-49

>ref|XP_006857525.1| hypothetical protein AMTR_s00061p00026580, partial [Amborella
            trichopoda] gi|548861621|gb|ERN18992.1| hypothetical
            protein AMTR_s00061p00026580, partial [Amborella
            trichopoda]
          Length = 595

 Score =  223 bits (568), Expect = 1e-55
 Identities = 133/296 (44%), Positives = 161/296 (54%), Gaps = 11/296 (3%)
 Frame = +1

Query: 202  DSDDEKPLVHRFTAQKLSKPPTEDSSK-SVDNSDDEEPLAIRLQRN---KKDGNGKV--- 360
            DSDDEKPL  +F  +  S      S K + D+SD+E+PL  + Q+N   KK+ NG++   
Sbjct: 188  DSDDEKPLSQKFPQKSSSGAVAGTSIKPAYDDSDEEKPLVSKFQQNGSSKKNLNGELSLK 247

Query: 361  ---IAEKSLTSSKKRLLDEDGAETH-FXXXXXXXXXXXXXXXXXXXXXXXXVPIAQRMKN 528
               I +K L    + L  +    T                           +PI+QRMK 
Sbjct: 248  ANHILKKRLAGEPQMLAKKPKPSTDPSPSSKVKIEVDVKAETSEKGDDEDDLPISQRMKK 307

Query: 529  NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKIQKLLKKRGTSVK 708
            +                                             K  K  KK    +K
Sbjct: 308  SASVSGQASAKKISVKTKVVSSSFK---------------------KTGKNTKKEIKKLK 346

Query: 709  NVKSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVVLTPEEEEVATFFAV 888
              KS K PPGSGDGQKWTTLEHNGVIFPPPY+PHG+KMLYNG PV LTPE+EEVAT FAV
Sbjct: 347  QSKSAKGPPGSGDGQKWTTLEHNGVIFPPPYKPHGVKMLYNGLPVDLTPEQEEVATMFAV 406

Query: 889  MKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHLQEKEKKKQMS 1056
            MK+T+YATKPKFVENF +DW+ ILG  H+I+KFELCD TPIYEWHL+EKEKKK MS
Sbjct: 407  MKDTEYATKPKFVENFMNDWRVILGKNHIIKKFELCDLTPIYEWHLKEKEKKKHMS 462


>ref|NP_001157806.1| topoisomerase I [Zea mays] gi|240065169|gb|ACS44671.1| DNA
            topoisomerase I [Zea mays]
          Length = 904

 Score =  219 bits (558), Expect = 2e-54
 Identities = 126/302 (41%), Positives = 161/302 (53%), Gaps = 14/302 (4%)
 Frame = +1

Query: 196  ESDSDDEKPLVHRFTAQKLSKPPTEDSSKSVDNSDDEEPLAIRLQRNKKDGNGKVIAE-K 372
            + DSDD+KPL  R  +    K   + S    ++S+DE+PLA R  +    GN K+ +  K
Sbjct: 189  DEDSDDDKPLASRLPSNAGPKSGGDVS----EDSEDEKPLAARFSKVAGSGNPKIASSSK 244

Query: 373  SLTSSK-------KRLLDEDGAETHFXXXXXXXXXXXXXXXXXXXXXXXXVPIAQRMKNN 531
             LTS         KR LD     +                           P+AQR+K  
Sbjct: 245  GLTSDTNGQQSLGKRPLDSSNQTSSALKKAKPSNVSASAIVRREIKTDDNTPLAQRLKMG 304

Query: 532  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKIQKLLKKRGTSVKN 711
                                                         K  K +K +G   KN
Sbjct: 305  ESSKGKSSAKSVFKKSPVSVK------------------------KDIKKMKGKGKLKKN 340

Query: 712  VKSQ------KLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVVLTPEEEEVA 873
            +K+       K+PPGSG G+KWTTLEHNGVIFPPPY+PHG+KMLYNGKPV LTPE+EEVA
Sbjct: 341  MKNSQFSKIMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLYNGKPVDLTPEQEEVA 400

Query: 874  TFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHLQEKEKKKQM 1053
            T FAVMK+TDYA KP F++NF+ DW+++LG  H+I+ FELCDFTPIYEWHL+EKE+KKQM
Sbjct: 401  TMFAVMKDTDYAAKPTFIDNFFTDWRKVLGKNHIIKNFELCDFTPIYEWHLREKERKKQM 460

Query: 1054 ST 1059
            +T
Sbjct: 461  TT 462


>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  211 bits (538), Expect = 3e-52
 Identities = 97/131 (74%), Positives = 111/131 (84%)
 Frame = +1

Query: 667  KIQKLLKKRGTSVKNVKSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVV 846
            K  K  KK   S K  KS K+PP SG+GQKWTTLEHNGVIFPPPY+PHG+KMLYNG+PV 
Sbjct: 152  KKAKKSKKLAKSSKYSKSTKVPPNSGEGQKWTTLEHNGVIFPPPYKPHGVKMLYNGRPVD 211

Query: 847  LTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHL 1026
            LTPE+EEVAT FAVMK+TDYATKP+F+ENF +DW+  LG  HVI+KFELCDFTPIYEWH 
Sbjct: 212  LTPEQEEVATMFAVMKDTDYATKPRFIENFMNDWRVRLGKNHVIKKFELCDFTPIYEWHE 271

Query: 1027 QEKEKKKQMST 1059
            +EKEKKKQM+T
Sbjct: 272  KEKEKKKQMTT 282


>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 883

 Score =  211 bits (538), Expect = 3e-52
 Identities = 97/131 (74%), Positives = 111/131 (84%)
 Frame = +1

Query: 667  KIQKLLKKRGTSVKNVKSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVV 846
            K  K  KK   S K  KS K+PP SG+GQKWTTLEHNGVIFPPPY+PHG+KMLYNG+PV 
Sbjct: 311  KKAKKSKKLAKSSKYSKSTKVPPNSGEGQKWTTLEHNGVIFPPPYKPHGVKMLYNGRPVD 370

Query: 847  LTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHL 1026
            LTPE+EEVAT FAVMK+TDYATKP+F+ENF +DW+  LG  HVI+KFELCDFTPIYEWH 
Sbjct: 371  LTPEQEEVATMFAVMKDTDYATKPRFIENFMNDWRVRLGKNHVIKKFELCDFTPIYEWHE 430

Query: 1027 QEKEKKKQMST 1059
            +EKEKKKQM+T
Sbjct: 431  KEKEKKKQMTT 441


>ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [Sorghum bicolor]
            gi|241940222|gb|EES13367.1| hypothetical protein
            SORBIDRAFT_07g003610 [Sorghum bicolor]
          Length = 921

 Score =  211 bits (537), Expect = 4e-52
 Identities = 96/138 (69%), Positives = 117/138 (84%), Gaps = 6/138 (4%)
 Frame = +1

Query: 664  AKIQKLLKKRGTSVKNVKSQ------KLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKML 825
            AK  K LK +G   KN+K+       ++PPGSG+G+KWTTLEHNGVIFPPPY+PHG+KML
Sbjct: 342  AKDIKKLKGKGKLKKNMKNSQFSKTMRVPPGSGEGKKWTTLEHNGVIFPPPYKPHGVKML 401

Query: 826  YNGKPVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFT 1005
            YNG+PV LTPE+EEVAT FAVMK+TDYA KP F++NF+ DW++ILG  H+I+KFELCDFT
Sbjct: 402  YNGQPVDLTPEQEEVATMFAVMKDTDYAGKPTFIDNFFTDWRKILGKNHIIKKFELCDFT 461

Query: 1006 PIYEWHLQEKEKKKQMST 1059
            PIYEWHL+EKEKKKQM+T
Sbjct: 462  PIYEWHLREKEKKKQMTT 479


>ref|XP_006856202.1| hypothetical protein AMTR_s00059p00193620 [Amborella trichopoda]
            gi|548860061|gb|ERN17669.1| hypothetical protein
            AMTR_s00059p00193620 [Amborella trichopoda]
          Length = 884

 Score =  210 bits (534), Expect = 9e-52
 Identities = 96/130 (73%), Positives = 110/130 (84%)
 Frame = +1

Query: 667  KIQKLLKKRGTSVKNVKSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVV 846
            K  K  KK    +K  KS K PPGSGDGQKW+TLEHNGVIFP PY+PHG+KMLYNG+PV 
Sbjct: 326  KTGKNSKKEMKKIKGSKSAKGPPGSGDGQKWSTLEHNGVIFPSPYKPHGVKMLYNGQPVD 385

Query: 847  LTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHL 1026
            LTPE+EEVAT FAVMK+T+Y TKPKF++NF +DW+ ILG  HVI+KFELCDFTPIYEWHL
Sbjct: 386  LTPEKEEVATMFAVMKDTEYETKPKFIDNFMNDWRVILGKNHVIKKFELCDFTPIYEWHL 445

Query: 1027 QEKEKKKQMS 1056
            +EKEKKKQMS
Sbjct: 446  KEKEKKKQMS 455


>gb|AFW61219.1| DNA topoisomerase I [Zea mays]
          Length = 602

 Score =  207 bits (528), Expect = 5e-51
 Identities = 91/134 (67%), Positives = 113/134 (84%), Gaps = 6/134 (4%)
 Frame = +1

Query: 676  KLLKKRGTSVKNVKSQ------KLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGK 837
            K +K +G   KN+K+       K+PPGSG G+KWTTLEHNGVIFPPPY+PHG+KMLYNGK
Sbjct: 27   KKMKGKGKLKKNMKNSQFSKIMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLYNGK 86

Query: 838  PVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYE 1017
            P+ LTPE+EEVAT FAVMK+TDYA KP F++NF+ DW+++LG  H+I+ FELCDFTPIYE
Sbjct: 87   PIDLTPEQEEVATMFAVMKDTDYAAKPTFIDNFFTDWRKVLGKNHIIKNFELCDFTPIYE 146

Query: 1018 WHLQEKEKKKQMST 1059
            WHL+EKE+KKQM+T
Sbjct: 147  WHLREKERKKQMTT 160


>gb|AFW61218.1| hypothetical protein ZEAMMB73_011101 [Zea mays]
          Length = 438

 Score =  207 bits (528), Expect = 5e-51
 Identities = 91/134 (67%), Positives = 113/134 (84%), Gaps = 6/134 (4%)
 Frame = +1

Query: 676  KLLKKRGTSVKNVKSQ------KLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGK 837
            K +K +G   KN+K+       K+PPGSG G+KWTTLEHNGVIFPPPY+PHG+KMLYNGK
Sbjct: 27   KKMKGKGKLKKNMKNSQFSKIMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLYNGK 86

Query: 838  PVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYE 1017
            P+ LTPE+EEVAT FAVMK+TDYA KP F++NF+ DW+++LG  H+I+ FELCDFTPIYE
Sbjct: 87   PIDLTPEQEEVATMFAVMKDTDYAAKPTFIDNFFTDWRKVLGKNHIIKNFELCDFTPIYE 146

Query: 1018 WHLQEKEKKKQMST 1059
            WHL+EKE+KKQM+T
Sbjct: 147  WHLREKERKKQMTT 160


>ref|XP_004972822.1| PREDICTED: DNA topoisomerase 1-like isoform X3 [Setaria italica]
          Length = 903

 Score =  207 bits (527), Expect = 6e-51
 Identities = 96/140 (68%), Positives = 114/140 (81%), Gaps = 8/140 (5%)
 Frame = +1

Query: 664  AKIQKLLKKRGTSVKNV--------KSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIK 819
            A ++K +KK    VK          K+ K+PPGSG G+KWTTLEHNGVIFPPPY+PHG+K
Sbjct: 322  ASMKKGIKKMKGKVKTKMMKNSQFSKTMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVK 381

Query: 820  MLYNGKPVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCD 999
            MLYNG+PV LTPE+EEVAT FAVMK+TDYA KP F+ENF+ DW+ +LG  HVI+KFELCD
Sbjct: 382  MLYNGQPVDLTPEQEEVATMFAVMKDTDYAGKPTFIENFFTDWRTLLGKNHVIKKFELCD 441

Query: 1000 FTPIYEWHLQEKEKKKQMST 1059
            FTPIYEWHL+EKEKKKQM+T
Sbjct: 442  FTPIYEWHLREKEKKKQMTT 461


>ref|XP_004972821.1| PREDICTED: DNA topoisomerase 1-like isoform X2 [Setaria italica]
          Length = 930

 Score =  207 bits (527), Expect = 6e-51
 Identities = 96/140 (68%), Positives = 114/140 (81%), Gaps = 8/140 (5%)
 Frame = +1

Query: 664  AKIQKLLKKRGTSVKNV--------KSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIK 819
            A ++K +KK    VK          K+ K+PPGSG G+KWTTLEHNGVIFPPPY+PHG+K
Sbjct: 322  ASMKKGIKKMKGKVKTKMMKNSQFSKTMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVK 381

Query: 820  MLYNGKPVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCD 999
            MLYNG+PV LTPE+EEVAT FAVMK+TDYA KP F+ENF+ DW+ +LG  HVI+KFELCD
Sbjct: 382  MLYNGQPVDLTPEQEEVATMFAVMKDTDYAGKPTFIENFFTDWRTLLGKNHVIKKFELCD 441

Query: 1000 FTPIYEWHLQEKEKKKQMST 1059
            FTPIYEWHL+EKEKKKQM+T
Sbjct: 442  FTPIYEWHLREKEKKKQMTT 461


>ref|XP_004972820.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Setaria italica]
          Length = 932

 Score =  207 bits (527), Expect = 6e-51
 Identities = 96/140 (68%), Positives = 114/140 (81%), Gaps = 8/140 (5%)
 Frame = +1

Query: 664  AKIQKLLKKRGTSVKNV--------KSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIK 819
            A ++K +KK    VK          K+ K+PPGSG G+KWTTLEHNGVIFPPPY+PHG+K
Sbjct: 322  ASMKKGIKKMKGKVKTKMMKNSQFSKTMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVK 381

Query: 820  MLYNGKPVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCD 999
            MLYNG+PV LTPE+EEVAT FAVMK+TDYA KP F+ENF+ DW+ +LG  HVI+KFELCD
Sbjct: 382  MLYNGQPVDLTPEQEEVATMFAVMKDTDYAGKPTFIENFFTDWRTLLGKNHVIKKFELCD 441

Query: 1000 FTPIYEWHLQEKEKKKQMST 1059
            FTPIYEWHL+EKEKKKQM+T
Sbjct: 442  FTPIYEWHLREKEKKKQMTT 461


>gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [Theobroma cacao]
          Length = 733

 Score =  207 bits (526), Expect = 8e-51
 Identities = 124/295 (42%), Positives = 153/295 (51%), Gaps = 9/295 (3%)
 Frame = +1

Query: 202  DSDDEKPLVHRFTAQKLSKPPTEDSSKSVDNSDDEEPLAIRLQRNKKDGNGKVIAEKSLT 381
            D DDE PL  RF      K  T  SS  + + D+++PLA ++Q+N     GK   + S T
Sbjct: 69   DPDDEAPLSARFNV----KSNTGTSSSRLHDCDEKKPLASKIQQNGSIMKGK--QQNSST 122

Query: 382  SSKKRLLDEDGAETHFXXXXXXXXXXXXXXXXXXXXXXXX--------VPIAQRMKNNXX 537
             S KR LD+  +  H                                 +PIAQRMK +  
Sbjct: 123  LSGKRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQVTVKAEKADEDDDHMPIAQRMKKSTA 182

Query: 538  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKIQKLLKKRGTSVKNVK 717
                                                       KI K  KK   S K +K
Sbjct: 183  SNSKLSSMKQKTTKVVSSSFK----------------------KINKKSKKEMKSSKYIK 220

Query: 718  SQKLPPGSGDGQK-WTTLEHNGVIFPPPYQPHGIKMLYNGKPVVLTPEEEEVATFFAVMK 894
            S K+PP SGDGQK W+TL HNGVIFP PY PHG+KMLY+G+PV LTPE+EEVAT FAVMK
Sbjct: 221  STKVPPSSGDGQKKWSTLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMK 280

Query: 895  ETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHLQEKEKKKQMST 1059
            +TDY +K +F +NFW DW ++LG  H I+  + CDFTPIYEWHLQEKEKKKQMS+
Sbjct: 281  DTDYMSKTQFKKNFWEDWSKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSS 335


>gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
            gi|508720296|gb|EOY12193.1| DNA topoisomerase I alpha
            isoform 3 [Theobroma cacao]
          Length = 836

 Score =  207 bits (526), Expect = 8e-51
 Identities = 124/295 (42%), Positives = 153/295 (51%), Gaps = 9/295 (3%)
 Frame = +1

Query: 202  DSDDEKPLVHRFTAQKLSKPPTEDSSKSVDNSDDEEPLAIRLQRNKKDGNGKVIAEKSLT 381
            D DDE PL  RF      K  T  SS  + + D+++PLA ++Q+N     GK   + S T
Sbjct: 196  DPDDEAPLSARFNV----KSNTGTSSSRLHDCDEKKPLASKIQQNGSIMKGK--QQNSST 249

Query: 382  SSKKRLLDEDGAETHFXXXXXXXXXXXXXXXXXXXXXXXX--------VPIAQRMKNNXX 537
             S KR LD+  +  H                                 +PIAQRMK +  
Sbjct: 250  LSGKRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQVTVKAEKADEDDDHMPIAQRMKKSTA 309

Query: 538  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKIQKLLKKRGTSVKNVK 717
                                                       KI K  KK   S K +K
Sbjct: 310  SNSKLSSMKQKTTKVVSSSFK----------------------KINKKSKKEMKSSKYIK 347

Query: 718  SQKLPPGSGDGQK-WTTLEHNGVIFPPPYQPHGIKMLYNGKPVVLTPEEEEVATFFAVMK 894
            S K+PP SGDGQK W+TL HNGVIFP PY PHG+KMLY+G+PV LTPE+EEVAT FAVMK
Sbjct: 348  STKVPPSSGDGQKKWSTLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMK 407

Query: 895  ETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHLQEKEKKKQMST 1059
            +TDY +K +F +NFW DW ++LG  H I+  + CDFTPIYEWHLQEKEKKKQMS+
Sbjct: 408  DTDYMSKTQFKKNFWEDWSKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSS 462


>gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
            gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha
            isoform 1 [Theobroma cacao]
          Length = 904

 Score =  207 bits (526), Expect = 8e-51
 Identities = 124/295 (42%), Positives = 153/295 (51%), Gaps = 9/295 (3%)
 Frame = +1

Query: 202  DSDDEKPLVHRFTAQKLSKPPTEDSSKSVDNSDDEEPLAIRLQRNKKDGNGKVIAEKSLT 381
            D DDE PL  RF      K  T  SS  + + D+++PLA ++Q+N     GK   + S T
Sbjct: 196  DPDDEAPLSARFNV----KSNTGTSSSRLHDCDEKKPLASKIQQNGSIMKGK--QQNSST 249

Query: 382  SSKKRLLDEDGAETHFXXXXXXXXXXXXXXXXXXXXXXXX--------VPIAQRMKNNXX 537
             S KR LD+  +  H                                 +PIAQRMK +  
Sbjct: 250  LSGKRPLDKGNSSDHSSAKKPKTSDAPTTMKTKQVTVKAEKADEDDDHMPIAQRMKKSTA 309

Query: 538  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKIQKLLKKRGTSVKNVK 717
                                                       KI K  KK   S K +K
Sbjct: 310  SNSKLSSMKQKTTKVVSSSFK----------------------KINKKSKKEMKSSKYIK 347

Query: 718  SQKLPPGSGDGQK-WTTLEHNGVIFPPPYQPHGIKMLYNGKPVVLTPEEEEVATFFAVMK 894
            S K+PP SGDGQK W+TL HNGVIFP PY PHG+KMLY+G+PV LTPE+EEVAT FAVMK
Sbjct: 348  STKVPPSSGDGQKKWSTLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATMFAVMK 407

Query: 895  ETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHLQEKEKKKQMST 1059
            +TDY +K +F +NFW DW ++LG  H I+  + CDFTPIYEWHLQEKEKKKQMS+
Sbjct: 408  DTDYMSKTQFKKNFWEDWSKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSS 462


>gb|ACL52396.1| unknown [Zea mays]
          Length = 574

 Score =  206 bits (525), Expect = 1e-50
 Identities = 90/132 (68%), Positives = 112/132 (84%), Gaps = 6/132 (4%)
 Frame = +1

Query: 682  LKKRGTSVKNVKSQ------KLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPV 843
            +K +G   KN+K+       K+PPGSG G+KWTTLEHNGVIFPPPY+PHG+KMLYNGKP+
Sbjct: 1    MKGKGKLKKNMKNSQFSKIMKVPPGSGGGKKWTTLEHNGVIFPPPYKPHGVKMLYNGKPI 60

Query: 844  VLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWH 1023
             LTPE+EEVAT FAVMK+TDYA KP F++NF+ DW+++LG  H+I+ FELCDFTPIYEWH
Sbjct: 61   DLTPEQEEVATMFAVMKDTDYAAKPTFIDNFFTDWRKVLGKNHIIKNFELCDFTPIYEWH 120

Query: 1024 LQEKEKKKQMST 1059
            L+EKE+KKQM+T
Sbjct: 121  LREKERKKQMTT 132


>gb|EMS46223.1| DNA topoisomerase 1 [Triticum urartu]
          Length = 947

 Score =  205 bits (522), Expect = 2e-50
 Identities = 92/131 (70%), Positives = 111/131 (84%)
 Frame = +1

Query: 667  KIQKLLKKRGTSVKNVKSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVV 846
            K +   KK   S +  KS ++PPGSG G+KW+TLEHNGVIFPPPY PHG+KMLYNG+PV 
Sbjct: 375  KFKTKTKKTMKSSQFSKSLRVPPGSGGGKKWSTLEHNGVIFPPPYNPHGVKMLYNGQPVE 434

Query: 847  LTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHL 1026
            LTPEEEEVAT FAVMK+T+YATK  F++NF+ DWK+ILG  H+I+KFELCDFTPIYEWHL
Sbjct: 435  LTPEEEEVATMFAVMKDTEYATKKTFIDNFFGDWKKILGKNHIIKKFELCDFTPIYEWHL 494

Query: 1027 QEKEKKKQMST 1059
            +EKEKKKQM++
Sbjct: 495  REKEKKKQMTS 505


>gb|EMT20272.1| DNA topoisomerase 1 [Aegilops tauschii]
          Length = 949

 Score =  203 bits (517), Expect = 9e-50
 Identities = 91/131 (69%), Positives = 110/131 (83%)
 Frame = +1

Query: 667  KIQKLLKKRGTSVKNVKSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVV 846
            K +   KK   S +  KS ++PPGSG G+KW+TLEHNGVIFPPPY PHG+KMLYNG+PV 
Sbjct: 377  KFKTKTKKTMKSSQFSKSLRVPPGSGGGKKWSTLEHNGVIFPPPYNPHGVKMLYNGQPVE 436

Query: 847  LTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHL 1026
            LTPEEEEVAT FAVMK+T+YA K  F++NF+ DWK+ILG  H+I+KFELCDFTPIYEWHL
Sbjct: 437  LTPEEEEVATMFAVMKDTEYAAKKTFIDNFFGDWKKILGKNHIIKKFELCDFTPIYEWHL 496

Query: 1027 QEKEKKKQMST 1059
            +EKEKKKQM++
Sbjct: 497  REKEKKKQMTS 507


>ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group]
            gi|27817923|dbj|BAC55688.1| putative DNA topoisomerase I
            [Oryza sativa Japonica Group]
            gi|113622984|dbj|BAF22929.1| Os08g0154600 [Oryza sativa
            Japonica Group] gi|222639933|gb|EEE68065.1| hypothetical
            protein OsJ_26075 [Oryza sativa Japonica Group]
          Length = 916

 Score =  202 bits (514), Expect = 2e-49
 Identities = 92/134 (68%), Positives = 113/134 (84%), Gaps = 3/134 (2%)
 Frame = +1

Query: 667  KIQKLLKKRGTSVKNV---KSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGK 837
            K  K+  K   ++KN    K+ K+PPGSG GQKWTTL H+GVIFPPPY+PHG+KMLYNG+
Sbjct: 341  KKMKMKMKTKKTMKNSQFSKTMKVPPGSGGGQKWTTLVHSGVIFPPPYKPHGVKMLYNGQ 400

Query: 838  PVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYE 1017
            PV LTPE+EEVAT FAVMK+TDYA+K  F++NF+ DW++ILG  HVI+KFELCDFTPIYE
Sbjct: 401  PVDLTPEQEEVATMFAVMKDTDYASKQTFIDNFFTDWRKILGKNHVIKKFELCDFTPIYE 460

Query: 1018 WHLQEKEKKKQMST 1059
            WHL+EKEKKKQM++
Sbjct: 461  WHLREKEKKKQMTS 474


>ref|XP_006659124.1| PREDICTED: DNA topoisomerase 1-like [Oryza brachyantha]
          Length = 911

 Score =  201 bits (511), Expect = 4e-49
 Identities = 86/115 (74%), Positives = 105/115 (91%)
 Frame = +1

Query: 715  KSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGKPVVLTPEEEEVATFFAVMK 894
            K+ K+PPGSG GQKWTTL HNGVIFPPPY+PHG+KMLYNG+PV LTPE+EEVAT F+VMK
Sbjct: 355  KTMKVPPGSGGGQKWTTLVHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFSVMK 414

Query: 895  ETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYEWHLQEKEKKKQMST 1059
            +TDYA+K  F++NF+ DW++ILG  H+I+KFELCDFTPIYEWHL+EKEKKKQM++
Sbjct: 415  DTDYASKQTFIDNFFTDWRKILGKNHIIKKFELCDFTPIYEWHLREKEKKKQMTS 469


>gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indica Group]
          Length = 916

 Score =  200 bits (509), Expect = 7e-49
 Identities = 91/134 (67%), Positives = 113/134 (84%), Gaps = 3/134 (2%)
 Frame = +1

Query: 667  KIQKLLKKRGTSVKNV---KSQKLPPGSGDGQKWTTLEHNGVIFPPPYQPHGIKMLYNGK 837
            K  K+  K   ++KN    K+ K+PPGSG GQKWTTL H+GVIFPPPY+PHG+K+LYNG+
Sbjct: 341  KKMKMKLKTKKTMKNSQFSKTMKVPPGSGGGQKWTTLVHSGVIFPPPYKPHGVKILYNGQ 400

Query: 838  PVVLTPEEEEVATFFAVMKETDYATKPKFVENFWHDWKRILGPKHVIQKFELCDFTPIYE 1017
            PV LTPE+EEVAT FAVMK+TDYA+K  F++NF+ DW++ILG  HVI+KFELCDFTPIYE
Sbjct: 401  PVDLTPEQEEVATMFAVMKDTDYASKQTFIDNFFTDWRKILGKNHVIKKFELCDFTPIYE 460

Query: 1018 WHLQEKEKKKQMST 1059
            WHL+EKEKKKQM++
Sbjct: 461  WHLREKEKKKQMTS 474