BLASTX nr result
ID: Ephedra25_contig00009539
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00009539
(1309 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-08
ref|XP_006494588.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-08
ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-08
ref|XP_006856950.1| hypothetical protein AMTR_s00451p00003410, p... 65 8e-08
ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citr... 64 1e-07
ref|XP_006840107.1| hypothetical protein AMTR_s00224p00011500 [A... 64 1e-07
ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi... 63 3e-07
emb|CBI37948.3| unnamed protein product [Vitis vinifera] 63 3e-07
emb|CAN69936.1| hypothetical protein VITISV_038780 [Vitis vinifera] 63 3e-07
gb|ESW03716.1| hypothetical protein PHAVU_011G0363001g, partial ... 62 4e-07
ref|XP_003573820.1| PREDICTED: pentatricopeptide repeat-containi... 62 4e-07
gb|EOX97788.1| Pentatricopeptide repeat-containing protein, puta... 61 9e-07
ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containi... 61 9e-07
ref|XP_006592076.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-06
ref|XP_006587670.1| PREDICTED: pentatricopeptide repeat-containi... 60 3e-06
gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis] 59 3e-06
ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containi... 59 4e-06
ref|XP_001764346.1| predicted protein [Physcomitrella patens] gi... 59 6e-06
ref|XP_004983341.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-05
ref|XP_004983340.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-05
>ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 713
Score = 65.9 bits (159), Expect = 4e-08
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +1
Query: 1159 AKDASEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
A D SE L YN +R GR+ DCI LLE+M++ G LDMDKVYHA+FF+V
Sbjct: 22 AHDVSEQLHSYNRLIRQGRISDCIDLLEDMERKGLLDMDKVYHARFFNV 70
>ref|XP_006494588.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 923
Score = 65.9 bits (159), Expect = 4e-08
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +1
Query: 1159 AKDASEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
A D SE L YN +R GR+ DCI LLE+M++ G LDMDKVYHA+FF+V
Sbjct: 381 AHDVSEQLHSYNRLIRQGRISDCIDLLEDMERKGLLDMDKVYHARFFNV 429
>ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X1 [Citrus sinensis]
Length = 1072
Score = 65.9 bits (159), Expect = 4e-08
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +1
Query: 1159 AKDASEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
A D SE L YN +R GR+ DCI LLE+M++ G LDMDKVYHA+FF+V
Sbjct: 381 AHDVSEQLHSYNRLIRQGRISDCIDLLEDMERKGLLDMDKVYHARFFNV 429
>ref|XP_006856950.1| hypothetical protein AMTR_s00451p00003410, partial [Amborella
trichopoda] gi|548860954|gb|ERN18417.1| hypothetical
protein AMTR_s00451p00003410, partial [Amborella
trichopoda]
Length = 927
Score = 64.7 bits (156), Expect = 8e-08
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Frame = +1
Query: 1144 LPIDSAK---DASEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
LP ++ K D SEYL YN WL+ GRL DCI LLE+M + LDMDK+YH +F ++
Sbjct: 460 LPNETEKEKDDLSEYLRMYNRWLKHGRLNDCIQLLESMDEKALLDMDKIYHTRFLNM 516
>ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citrus clementina]
gi|557525497|gb|ESR36803.1| hypothetical protein
CICLE_v10027915mg [Citrus clementina]
Length = 713
Score = 64.3 bits (155), Expect = 1e-07
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +1
Query: 1159 AKDASEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
A D SE L YN +R GR+ +CI LLE+M++ G LDMDKVYHA+FF+V
Sbjct: 22 AHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNV 70
>ref|XP_006840107.1| hypothetical protein AMTR_s00224p00011500 [Amborella trichopoda]
gi|548841763|gb|ERN01782.1| hypothetical protein
AMTR_s00224p00011500 [Amborella trichopoda]
Length = 1185
Score = 64.3 bits (155), Expect = 1e-07
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Frame = +1
Query: 1144 LPIDSAK---DASEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
LP +S K D SEYL YN WL+ GRL DCI LLE++ + LDMDK+YH +F ++
Sbjct: 460 LPNESEKEKDDLSEYLRMYNRWLKHGRLNDCIQLLESIDEKALLDMDKIYHTRFLNM 516
>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Vitis vinifera]
Length = 1115
Score = 62.8 bits (151), Expect = 3e-07
Identities = 30/45 (66%), Positives = 33/45 (73%)
Frame = +1
Query: 1171 SEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
SE S YN L GRL DCI LLE+M+K G LDMDKVYHAKFF +
Sbjct: 426 SEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKI 470
>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
Length = 1550
Score = 62.8 bits (151), Expect = 3e-07
Identities = 30/45 (66%), Positives = 33/45 (73%)
Frame = +1
Query: 1171 SEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
SE S YN L GRL DCI LLE+M+K G LDMDKVYHAKFF +
Sbjct: 861 SEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKI 905
>emb|CAN69936.1| hypothetical protein VITISV_038780 [Vitis vinifera]
Length = 1206
Score = 62.8 bits (151), Expect = 3e-07
Identities = 30/45 (66%), Positives = 33/45 (73%)
Frame = +1
Query: 1171 SEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
SE S YN L GRL DCI LLE+M+K G LDMDKVYHAKFF +
Sbjct: 426 SEKFSAYNRXLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKJ 470
>gb|ESW03716.1| hypothetical protein PHAVU_011G0363001g, partial [Phaseolus vulgaris]
Length = 1014
Score = 62.4 bits (150), Expect = 4e-07
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +1
Query: 1153 DSAKDASEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
D SE+LS YN+ L+VGRL +C+ LL++M+ G LDM KVYHAKFF++
Sbjct: 428 DQKNVPSEHLSKYNNLLKVGRLHECVELLKHMETKGLLDMTKVYHAKFFNI 478
>ref|XP_003573820.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Brachypodium distachyon]
Length = 1084
Score = 62.4 bits (150), Expect = 4e-07
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 14/87 (16%)
Frame = +1
Query: 1078 KQKKKHASHDSLVNLN---------ANLKDLLP-----IDSAKDASEYLSYYNHWLRVGR 1215
KQKK HD+ + NL++ +P ++ D S+Y+ YN L GR
Sbjct: 346 KQKKAVKDHDAAKTIGWTISEILSKENLENFIPAKTLGLNGTVDTSDYIRRYNSSLMDGR 405
Query: 1216 LKDCIALLENMKKSGCLDMDKVYHAKF 1296
LKDC+ LLENM++ G LDM K++HA F
Sbjct: 406 LKDCVDLLENMEQKGLLDMKKIHHASF 432
>gb|EOX97788.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 1110
Score = 61.2 bits (147), Expect = 9e-07
Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 11/236 (4%)
Frame = +1
Query: 631 EIQDTKSKTVHTDINDLASENSVYKA----SEDVKEESNTYAEGFSRTQEGYINDSPLR- 795
E + + S + D + L E V + E V+EE +T+ E + N + L+
Sbjct: 262 EPESSASSVLVKDAHVLVGEGEVTRHYDIFKESVREELHTFYEADQLVAKSSTNLNGLKP 321
Query: 796 SNEMDFDVDTNCYAS-RESKALERHPLSDKVTNKLDIGSLEKTKDVPNDQQEIDQRQSSA 972
++ F ++N ++S ++ L+R LS K N Q D +
Sbjct: 322 ASSRVFSPNSNSFSSLMQNSELKRAQLSSK-----------------NCLQTADMAEGKV 364
Query: 973 KVHFINKTALQNAEAKFRNPILIESYRMMSNDRSRKQKKKHASHDSLVNLNANLKDL--- 1143
N+ + S++ R R+ + S+ N L
Sbjct: 365 AQACSNR---------------VSSHKRQDFGRGREIPRDKGKRHSIQEKNTKLPKFPFP 409
Query: 1144 --LPIDSAKDASEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
+ D+ ++ YN LR GRL DC+ LLE+M++ G LDM+KVYHAKFF +
Sbjct: 410 NGMLADNKHRPEDHFRSYNRLLRDGRLSDCVDLLEDMEQRGLLDMNKVYHAKFFKI 465
>ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Cicer arietinum]
Length = 1113
Score = 61.2 bits (147), Expect = 9e-07
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +1
Query: 1066 DRSRKQKKKHASHDSLVNLNANLKDLLPIDSAK-DASEYLSYYNHWLRVGRLKDCIALLE 1242
D + + +SH V+++ + D K D S++LS Y++ L+ GRL++C+ LL+
Sbjct: 388 DHNSNKVLPQSSHSVRVHVDQKKDKIRVHDGQKIDPSKHLSKYSYLLKAGRLRECVELLK 447
Query: 1243 NMKKSGCLDMDKVYHAKFFDV 1305
+M+ G LDM K YHAKFF++
Sbjct: 448 DMEMKGLLDMTKAYHAKFFNI 468
>ref|XP_006592076.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like [Glycine max]
Length = 1127
Score = 60.8 bits (146), Expect = 1e-06
Identities = 27/47 (57%), Positives = 37/47 (78%)
Frame = +1
Query: 1165 DASEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
D+SE LS YN+ L+V RL +C+ LL++M+ G LDM KVYHAKFF++
Sbjct: 427 DSSELLSKYNNLLKVERLHECVELLKDMETKGLLDMSKVYHAKFFNI 473
>ref|XP_006587670.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like [Glycine max]
Length = 1150
Score = 59.7 bits (143), Expect = 3e-06
Identities = 27/47 (57%), Positives = 36/47 (76%)
Frame = +1
Query: 1165 DASEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
D SE LS YN+ L+V RL +C+ LL++M+ G LDM KVYHAKFF++
Sbjct: 450 DPSELLSKYNNLLKVERLHECVELLKDMETKGLLDMTKVYHAKFFNI 496
>gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis]
Length = 1125
Score = 59.3 bits (142), Expect = 3e-06
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +1
Query: 1084 KKKHASHDSLVNLNANLKDLLPIDSAKDASEYLSYYNHWLRVGRLKDCIALLENMKKSGC 1263
+ H + L LN L ++ SE +S YN ++ GRL D + LLE+M++ G
Sbjct: 412 QNNHKAPAKLTRLNG-----LDVEQKHHPSEQISTYNRLVKDGRLSDAVELLEDMERRGL 466
Query: 1264 LDMDKVYHAKFFDV 1305
LDM+KVYHAKFF +
Sbjct: 467 LDMNKVYHAKFFKI 480
>ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Solanum lycopersicum]
Length = 1182
Score = 58.9 bits (141), Expect = 4e-06
Identities = 29/78 (37%), Positives = 45/78 (57%)
Frame = +1
Query: 1072 SRKQKKKHASHDSLVNLNANLKDLLPIDSAKDASEYLSYYNHWLRVGRLKDCIALLENMK 1251
+ K+K + + + L + + + + S+ Y H+LR GRL DCI +LE+M+
Sbjct: 460 TNKEKSILSDNGASKQLQVSNPKSIQVCDRPNPSDQFRAYRHFLREGRLMDCIKILEDME 519
Query: 1252 KSGCLDMDKVYHAKFFDV 1305
+ G L+MDKVYHA FF V
Sbjct: 520 RHGSLNMDKVYHAGFFQV 537
>ref|XP_001764346.1| predicted protein [Physcomitrella patens] gi|162684498|gb|EDQ70900.1|
predicted protein [Physcomitrella patens]
Length = 978
Score = 58.5 bits (140), Expect = 6e-06
Identities = 32/106 (30%), Positives = 56/106 (52%)
Frame = +1
Query: 985 INKTALQNAEAKFRNPILIESYRMMSNDRSRKQKKKHASHDSLVNLNANLKDLLPIDSAK 1164
+ A+ + F + ++ +++ +RSRK+ K S V L + + +LLP+
Sbjct: 167 VEGAAVVDMNGSFAETVTVKVNSVITEERSRKKSVKTLQKGSRV-LPSTILELLPLKLET 225
Query: 1165 DASEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFD 1302
+ Y+ Y L+ GR+KDC+ LL M K+G L KV H+KF++
Sbjct: 226 NIKFYIDVYASMLKAGRIKDCLKLLGEMDKAGKLARMKVNHSKFYE 271
>ref|XP_004983341.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like isoform X3 [Setaria italica]
Length = 827
Score = 57.8 bits (138), Expect = 1e-05
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +1
Query: 1150 IDSAKDASEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
+ KD +Y YN +L GRLKDC+ LLE+M+++G LDM K++HA FF +
Sbjct: 366 LKGTKDTLDYSRIYNSFLIDGRLKDCVDLLESMEQNGLLDMKKIHHASFFSM 417
>ref|XP_004983340.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like isoform X2 [Setaria italica]
Length = 1027
Score = 57.8 bits (138), Expect = 1e-05
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +1
Query: 1150 IDSAKDASEYLSYYNHWLRVGRLKDCIALLENMKKSGCLDMDKVYHAKFFDV 1305
+ KD +Y YN +L GRLKDC+ LLE+M+++G LDM K++HA FF +
Sbjct: 326 LKGTKDTLDYSRIYNSFLIDGRLKDCVDLLESMEQNGLLDMKKIHHASFFSM 377