BLASTX nr result

ID: Ephedra25_contig00009374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00009374
         (737 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18400.1| unknown [Picea sitchensis]                              74   7e-11
gb|ABK22057.1| unknown [Picea sitchensis]                              68   4e-09

>gb|ABR18400.1| unknown [Picea sitchensis]
          Length = 115

 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
 Frame = +1

Query: 43  MSLACLSCHNVGRTDSDLRAYSLKAITEDERRWRSSTGCWXXXXXXXXXXXXXXLENSRS 222
           MSLACL+C NV RTDS  R YS ++  E++++  SS GCW                +++ 
Sbjct: 1   MSLACLTCQNVLRTDS-CRNYSFRS-DEEQQQTGSSMGCW----------------SNKK 42

Query: 223 NTTNKNEENLRRTVSADIYGSVGGTNKRCNVEEGYSSEA-ESSPRLVRSHAVRRHIFRDF 399
           N      EN  RT  A +  S GG +   N+    S++A +S+P+L+R HAVRR IFRD+
Sbjct: 43  NPQPPAAENTLRTRVAPVPPSGGGISN--NITGSSSNQAPDSNPKLMRCHAVRRDIFRDW 100

Query: 400 NFED 411
           +FED
Sbjct: 101 HFED 104


>gb|ABK22057.1| unknown [Picea sitchensis]
          Length = 103

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 46/126 (36%), Positives = 62/126 (49%)
 Frame = +1

Query: 43  MSLACLSCHNVGRTDSDLRAYSLKAITEDERRWRSSTGCWXXXXXXXXXXXXXXLENSRS 222
           MSLACL+C  V RTDSDLR+YS    ++ E+R  +  GCW                    
Sbjct: 1   MSLACLTCQVVQRTDSDLRSYSFN--SQQEQRCGAVVGCW-------------------- 38

Query: 223 NTTNKNEENLRRTVSADIYGSVGGTNKRCNVEEGYSSEAESSPRLVRSHAVRRHIFRDFN 402
           +T N  +  L   VSA +   +  +N   N       +   SPRL R HAVRR I RD+N
Sbjct: 39  STKNPRQPPLEE-VSARVVPVLSNSNSNNN-------QGPVSPRLTRCHAVRRDILRDWN 90

Query: 403 FEDVSD 420
           FE+ ++
Sbjct: 91  FEEFAE 96


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