BLASTX nr result

ID: Ephedra25_contig00009320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00009320
         (508 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004298128.1| PREDICTED: uncharacterized protein LOC101292...    56   4e-06
ref|XP_006840528.1| hypothetical protein AMTR_s00045p00208580 [A...    55   7e-06

>ref|XP_004298128.1| PREDICTED: uncharacterized protein LOC101292406 [Fragaria vesca
           subsp. vesca]
          Length = 853

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 52/160 (32%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
 Frame = +2

Query: 86  SLHKNLEKEKVASEILVELADCVVDGYDLQKLQLGSTDSKNGVH---YCQNSG------M 238
           +L  NLE    A ++L+ELADCVVD       Q GS+++K  V    Y Q++        
Sbjct: 275 TLKDNLEGHNTARKLLIELADCVVD------FQTGSSNAKQQVQQVCYPQSNFEPGYNCS 328

Query: 239 MLSPKNNPTKSQIAGSSYSQPQKIRMGMNASR-----------STDTSLSELNTIITEKL 385
           M  P +  T S +     S   ++ +G+  SR           S + S   LN      L
Sbjct: 329 MGGPSSFNTFSDMDAMRTSCYAEVPIGIGVSRLGENGGAMEGPSDEGSCYHLNN--NNWL 386

Query: 386 TRGNQTQNSSLAKSPLEAKAYPNNWGRCNSHTPSWGGRIV 505
            R    Q SS+  S  E    PN+WGRC     SWGGR+V
Sbjct: 387 GRDQSRQCSSMNSSSSELM--PNDWGRCGMPPLSWGGRVV 424


>ref|XP_006840528.1| hypothetical protein AMTR_s00045p00208580 [Amborella trichopoda]
           gi|548842246|gb|ERN02203.1| hypothetical protein
           AMTR_s00045p00208580 [Amborella trichopoda]
          Length = 869

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 51/151 (33%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
 Frame = +2

Query: 86  SLHKNLEKEKVASEILVELADCVVDGYDLQKLQLGSTDSKN-GVHYCQNS-GMMLSPKN- 256
           SL    E  K A +ILVELADCVVD  +  K+Q GS   ++ G  Y  N  G    P N 
Sbjct: 287 SLCDKQEGHKAAHKILVELADCVVDFNEPLKVQQGSCSQQSVGSKYANNKVGAPNLPSNL 346

Query: 257 NPTKSQIAGSSYSQPQKIRMGMNASRSTDTSLSELNTIITEKLTRGNQ----TQNSSLAK 424
           +     I   +     +  M  +   S D S+ E  +        GN     +++ S A 
Sbjct: 347 HGGFDTIKTCNVYVEMQENMEESRMSSNDASMEEGPSDENSSPYHGNHDIWVSRDESKAT 406

Query: 425 SPLEAK---AYPNNWGRCN-SHTPSWGGRIV 505
           S + +       N+WGRCN S +PSWGGR+V
Sbjct: 407 SSIVSPCNGVMLNDWGRCNLSPSPSWGGRVV 437


Top