BLASTX nr result

ID: Ephedra25_contig00009222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00009222
         (850 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004294092.1| PREDICTED: uncharacterized protein LOC101291...    81   5e-13
ref|XP_002317444.1| hypothetical protein POPTR_0011s10770g [Popu...    73   1e-10
gb|ABR18334.1| unknown [Picea sitchensis]                              70   1e-09
ref|XP_002977911.1| hypothetical protein SELMODRAFT_107776 [Sela...    57   6e-06

>ref|XP_004294092.1| PREDICTED: uncharacterized protein LOC101291800 [Fragaria vesca
           subsp. vesca]
          Length = 472

 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 63/226 (27%), Positives = 95/226 (42%), Gaps = 13/226 (5%)
 Frame = -3

Query: 665 SVEGWEGVQRHGQDIVERFFGTAQDLGVHVLSHLDSQKWPWNNNTSDNKGTKGIDRVHFG 486
           S E WE VQRHGQD+ +R    AQ     + +H+++  +PW ++ +            FG
Sbjct: 6   SFEAWEEVQRHGQDLADRL---AQGFTGLIQTHINTPSFPWPSSQNPKLFDLEFPTQSFG 62

Query: 485 XXXXXXXXXXXXXXXXXXXSEMDASSILQLGKKLGDAGADFGARVGEVFNNVLHSLPLPD 306
                                   S+IL +G ++G AGA+FGA +  +      SLP+P 
Sbjct: 63  KRRDFVGVAAARSSGNGING---VSAILDIGNRIGQAGAEFGAGLDGMVQQFFRSLPVP- 118

Query: 305 FGHPQS----------LFPPLRISYKPEVSPTVXXXXXXXXXXXXXXXXXXXXXXXXXXX 156
           F H +S              +R+S K E+  +V                           
Sbjct: 119 FRHEESGVVAVRVDKEKVKNMRVSGKEELGVSVRDNRGVESDSGADGFVDEELAGLNLRS 178

Query: 155 SGL---PKVNVTVSTSYDSQLQNIESSVVASGSLWRAEVSSGGLSS 27
           +GL   P+  +  ST+YDS+   +ESS+VA G LWR E S G  +S
Sbjct: 179 AGLLGRPQGILNTSTTYDSRTHELESSLVARGDLWRVEASQGSSTS 224


>ref|XP_002317444.1| hypothetical protein POPTR_0011s10770g [Populus trichocarpa]
           gi|222860509|gb|EEE98056.1| hypothetical protein
           POPTR_0011s10770g [Populus trichocarpa]
          Length = 460

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 63/233 (27%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
 Frame = -3

Query: 665 SVEGWEGVQRHGQDIVERFFGTAQDLGVHVLSHLD-SQKWPWNNNTSDNKGT-----KGI 504
           S E WE VQRHGQD+ +R    AQ     + SH+     + W N+             G 
Sbjct: 6   SFEAWEEVQRHGQDLADRL---AQGFSGLIQSHMTYPPTFSWPNSPKSKPFDLEFPGHGF 62

Query: 503 DRVHFGXXXXXXXXXXXXXXXXXXXSEMDASSILQLGKKLGDAGADFGARVGEVFNNVLH 324
            +  FG                        S+IL +G ++G AGADFGA +  + +    
Sbjct: 63  SKNDFGVLTDNSGIDG-------------VSAILDIGNRIGQAGADFGAALNGLVHQFFR 109

Query: 323 SLPLPDFGHPQSLFPPLRISYKPEVSPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXSGL- 147
            LP+P F   +S+   LR+  K +                                 G+ 
Sbjct: 110 RLPVP-FKQEESVGAGLRMDGKRKRLRDFGFVEDNSGVGSRGVDELLEEEIGGFNLKGVG 168

Query: 146 ----PKVNVTVSTSYDSQLQNIESSVVASGSLWRAEVSSGGLSS-VDSTPMFM 3
               P+  + ++++YDS+  NIE S+VA G LWR E S G  +S  D++ MF+
Sbjct: 169 FLGKPQGTINITSTYDSRTHNIEGSLVARGDLWRVEASHGSSTSRNDNSSMFL 221


>gb|ABR18334.1| unknown [Picea sitchensis]
          Length = 489

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 45/132 (34%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
 Frame = -3

Query: 668 MSVEGWEGVQRHGQDIVERFFGTAQDLGVHVLSHLDS------------QKWPWNNNTSD 525
           MSVE WEG+QR GQDI ERF   AQ     + SH+ +             +WPW      
Sbjct: 1   MSVEAWEGMQRQGQDIAERFSSFAQSFSCLLQSHMGNPEYDNKSEEQGIPRWPW--PWQA 58

Query: 524 NKGTKGIDRVHFGXXXXXXXXXXXXXXXXXXXSEMDASSILQLGKKLGDAGADFGARVGE 345
            +  K  DRV                       E     +L+LGK+LG  GAD GA VG 
Sbjct: 59  KRQGKSFDRVRL----------RKRRTVAGSTRESGGPPVLELGKRLGQVGADVGACVGG 108

Query: 344 VFNNVLHSLPLP 309
           +  NV+ + P P
Sbjct: 109 IVQNVVQNFPRP 120


>ref|XP_002977911.1| hypothetical protein SELMODRAFT_107776 [Selaginella moellendorffii]
           gi|300154614|gb|EFJ21249.1| hypothetical protein
           SELMODRAFT_107776 [Selaginella moellendorffii]
          Length = 286

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 28/46 (60%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = -3

Query: 137 NVTVSTSYDSQLQNIESSVVASGSLWRAEVSSGGLSSVD-STPMFM 3
           ++TV+T+YDS+ Q+IESSVVA G LWRAE S GG SS + S+P+F+
Sbjct: 1   SITVTTTYDSRTQDIESSVVARGDLWRAEASHGGASSSNGSSPLFL 46


Top