BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00009205
         (2367 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849650.1| hypothetical protein AMTR_s00024p00227830 [A...   590   e-166
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein...   563   e-157
ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   562   e-157
ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...   554   e-155
gb|EMJ05100.1| hypothetical protein PRUPE_ppa015419mg, partial [...   540   e-151
ref|XP_006587039.1| PREDICTED: RNA polymerase-associated protein...   538   e-150
ref|XP_004513475.1| PREDICTED: RNA polymerase-associated protein...   538   e-150
ref|XP_004513474.1| PREDICTED: RNA polymerase-associated protein...   538   e-150
gb|ESW10664.1| hypothetical protein PHAVU_009G228100g [Phaseolus...   538   e-150
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein...   529   e-147
gb|EOY30289.1| Binding isoform 1 [Theobroma cacao]                    528   e-147
ref|XP_006381640.1| phosphoprotein [Populus trichocarpa] gi|5503...   527   e-147
ref|XP_006490821.1| PREDICTED: RNA polymerase-associated protein...   527   e-146
ref|XP_006451561.1| hypothetical protein CICLE_v10007295mg [Citr...   527   e-146
gb|EOY30291.1| Binding isoform 3, partial [Theobroma cacao]           526   e-146
gb|EXB38929.1| RNA polymerase-associated protein CTR9-like prote...   523   e-145
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]      523   e-145
ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ...   523   e-145
gb|EOY30290.1| Binding isoform 2 [Theobroma cacao]                    522   e-145
ref|XP_006342363.1| PREDICTED: RNA polymerase-associated protein...   519   e-144

>ref|XP_006849650.1| hypothetical protein AMTR_s00024p00227830 [Amborella trichopoda]
            gi|548853225|gb|ERN11231.1| hypothetical protein
            AMTR_s00024p00227830 [Amborella trichopoda]
          Length = 1078

 Score =  590 bits (1522), Expect = e-166
 Identities = 314/609 (51%), Positives = 402/609 (66%), Gaps = 12/609 (1%)
 Frame = +3

Query: 6    IELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNIDI 185
            +ELLNNIGVLHFERGEFELA + F EALG+G+W+   +G+++ P V + +F++  ++   
Sbjct: 448  VELLNNIGVLHFERGEFELADQTFKEALGEGIWLSFMDGKIYPPSVDARAFAMQYKDFSF 507

Query: 186  FQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXXX 365
            FQ+LEE+GT + LPW+KVT +FN  RL EQ++DTEKACLLY+L++FKFPDY D       
Sbjct: 508  FQKLEEDGTPLELPWDKVTALFNQARLLEQLHDTEKACLLYKLILFKFPDYGDAYLRLAA 567

Query: 366  XXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDEG 545
                   I+ S+EL+GDALK +EK   ALSMLG+LE+K +     ++ KA+ TFK   E 
Sbjct: 568  ISKSRNNIRMSIELIGDALKVNEKCPEALSMLGSLELKGD-----DWFKAKETFKAAREA 622

Query: 546  TGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGTG 722
            T  +DSYA + LGNW Y   VR++ K+P       EK RE+Y  VL + PG++YAANG G
Sbjct: 623  TDGRDSYATLSLGNWNYFAAVRNEKKEPKLEAAHLEKARELYGKVLMQRPGSLYAANGAG 682

Query: 723  IVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCLK 902
            +VLAE G FDV+KDIFTQVQEAA G+IFVQMPDVWVNLAHVYFAQ QF+LAVKMYQNCL+
Sbjct: 683  VVLAEKGHFDVSKDIFTQVQEAATGSIFVQMPDVWVNLAHVYFAQGQFALAVKMYQNCLR 742

Query: 903  KFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSASTL 1082
            KFYH TDT +LLYLART+Y+AEQWQDCKKTLLRAIHL PSNY+ RFDAG+A+QKFSASTL
Sbjct: 743  KFYHNTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHLQPSNYMLRFDAGVALQKFSASTL 802

Query: 1083 QKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKTH 1262
            QK K+TADEVR A+++L++AL +FSQLS  T  H HGF+EKK++THV YC+++LDAAK H
Sbjct: 803  QKTKRTADEVRLAVAELKNALRVFSQLSVATGHHCHGFDEKKIETHVGYCKHLLDAAKVH 862

Query: 1263 LGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNFA 1442
              AAER+EQQ RQK E+ARQ  L        +EQRK  Q ER                F 
Sbjct: 863  CEAAEREEQQIRQKLEVARQLVLAEEARRKAEEQRKF-QMERRKQEDELKQVMQQEEQFE 921

Query: 1443 RVKEQWRTGGKGGEDGSDSQPXXXXXXXXXXXXXXXXXXXXXNS-----KQHDSPLQGSD 1607
            RVKE WR+  K      D +                       S     +Q     +  +
Sbjct: 922  RVKELWRSKRKDRPHAEDEEEGGHGEKKKKKEKKRRKKDKHNKSLAEIEEQEADMEEPEE 981

Query: 1608 VGEDDEDVMAKKPEXXXXXXXXXXXXXXXXGE------MNASISKKSRRRPAYSDSEDDM 1769
            + EDD +++ +K E                 +       NAS SK SRR+PA+S+S++D 
Sbjct: 982  MEEDDANMLNEKEEDGENAQDALAAAGLEDFDDEEEMMQNASASKPSRRKPAWSESDNDE 1041

Query: 1770 TIERHNAQE 1796
             I+R  A E
Sbjct: 1042 PIDRPAAIE 1050


>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
            sativus]
          Length = 1074

 Score =  563 bits (1450), Expect = e-157
 Identities = 306/624 (49%), Positives = 393/624 (62%), Gaps = 32/624 (5%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIE+LNN+GVLHFER EFELA+R F EALGDG+W+D  +G++  P + +S+  L  ++++
Sbjct: 444  PIEVLNNLGVLHFEREEFELAERIFKEALGDGIWLDFIDGKVRCPAIEASASVLQYKDVE 503

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            +F +LE EG  + LPW+KVT++FNL RL EQ++  E + +LYRL++FK+PDYVD      
Sbjct: 504  LFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHRIEVSSVLYRLILFKYPDYVDAYLRLA 563

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    +Q S+ELV DALK ++K  NALSMLG LE+K      +++V+A+ TF+   E
Sbjct: 564  SIAKARNYVQLSIELVNDALKVNDKCSNALSMLGELELK-----NDDWVRAKETFRAAGE 618

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   +R++ ++P       EK +E+Y  VL + P N+YAANG 
Sbjct: 619  ATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKSKELYTRVLVQHPANLYAANGA 678

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
            G++LAE G FDV+KDIFTQVQEAA+GNIFVQMPDVW+NLAHVYFAQ  FSLAVKMYQNCL
Sbjct: 679  GVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQGNFSLAVKMYQNCL 738

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KFY+ TD  ILLYLARTYY+AEQWQDCKKTLLRAIHLAPSNY  RFDAG+AMQKFSAST
Sbjct: 739  RKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSAST 798

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK K+TADEVR  +++LE+A+ +FSQLS  ++ H HGF+EKK+DTHV YC+++L+AA  
Sbjct: 799  LQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDTHVGYCKHLLEAAGV 858

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            HL AAE +EQQ RQ+ ELARQ  L        DEQRK  Q ER               +F
Sbjct: 859  HLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKF-QLERRKLEDEEKRMMQQEQHF 917

Query: 1440 ARVKEQW--------------------------RTGGK-GGEDGSDSQPXXXXXXXXXXX 1538
             RVKEQW                          R GGK   +D                 
Sbjct: 918  KRVKEQWKSITPAKRRERSEIDDDEAGNSEKRRRKGGKRRKKDRKGKSHYETEEADNDMM 977

Query: 1539 XXXXXXXXXXNSKQHDSPLQGSDVGED----DEDVMAKKPEXXXXXXXXXXXXXXXXGEM 1706
                      N    +S  Q +D G+D    D+D +A+                    E 
Sbjct: 978  DDQELYNEDNNISYRESRSQVNDQGDDFEGNDQDALAE----------AGLEDSDAEDEA 1027

Query: 1707 NASISKKSRRRPAYSDSEDDMTIE 1778
             A  S  +RRR  +SDSE+D  I+
Sbjct: 1028 GAPSSNAARRRATWSDSEEDEPID 1051


>ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
            CTR9 homolog [Cucumis sativus]
          Length = 1050

 Score =  562 bits (1448), Expect = e-157
 Identities = 306/624 (49%), Positives = 392/624 (62%), Gaps = 32/624 (5%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIE+LNN+GVLHFER EFELA+R F EALGDG+W+D  +G++  P + +S+  L  ++++
Sbjct: 420  PIEVLNNLGVLHFEREEFELAERIFKEALGDGIWLDFIDGKVRCPAIEASASVLQYKDVE 479

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            +F +LE EG  + LPW+KVT++FNL RL EQ++  E + +LYRL++FK+PDYVD      
Sbjct: 480  LFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHRIEVSSVLYRLILFKYPDYVDAYLRLA 539

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    +Q S+ELV DALK ++K  NALSMLG LE K      +++V+A+ TF+   E
Sbjct: 540  SIAKARNYVQLSIELVNDALKVNDKCSNALSMLGELEXK-----NDDWVRAKETFRAAGE 594

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   +R++ ++P       EK +E+Y  VL + P N+YAANG 
Sbjct: 595  ATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKSKELYTRVLVQHPANLYAANGA 654

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
            G++LAE G FDV+KDIFTQVQEAA+GNIFVQMPDVW+NLAHVYFAQ  FSLAVKMYQNCL
Sbjct: 655  GVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQGNFSLAVKMYQNCL 714

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KFY+ TD  ILLYLARTYY+AEQWQDCKKTLLRAIHLAPSNY  RFDAG+AMQKFSAST
Sbjct: 715  RKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSAST 774

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK K+TADEVR  +++LE+A+ +FSQLS  ++ H HGF+EKK+DTHV YC+++L+AA  
Sbjct: 775  LQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDTHVGYCKHLLEAAGV 834

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            HL AAE +EQQ RQ+ ELARQ  L        DEQRK  Q ER               +F
Sbjct: 835  HLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKF-QLERRKLEDEEKRMMQQEQHF 893

Query: 1440 ARVKEQW--------------------------RTGGK-GGEDGSDSQPXXXXXXXXXXX 1538
             RVKEQW                          R GGK   +D                 
Sbjct: 894  KRVKEQWKSITPAKRRERSEIDDDEAGNSEKRRRKGGKRRKKDRKGKSHYETEEADNDMM 953

Query: 1539 XXXXXXXXXXNSKQHDSPLQGSDVGED----DEDVMAKKPEXXXXXXXXXXXXXXXXGEM 1706
                      N    +S  Q +D G+D    D+D +A+                    E 
Sbjct: 954  DDQELYNEDNNISYRESRSQVNDQGDDFEGNDQDALAE----------AGLEDSDAEDEA 1003

Query: 1707 NASISKKSRRRPAYSDSEDDMTIE 1778
             A  S  +RRR  +SDSE+D  I+
Sbjct: 1004 GAPSSNAARRRATWSDSEEDEPID 1027


>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score =  554 bits (1427), Expect = e-155
 Identities = 296/646 (45%), Positives = 400/646 (61%), Gaps = 20/646 (3%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIELLNNIGVL+FERGEFELA++ F EA+GDG+W+   + + +     + +     +++ 
Sbjct: 447  PIELLNNIGVLYFERGEFELAEQTFKEAVGDGIWLSFIDDKAYSYANDARTSMHHFKDMQ 506

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            +F +LEE+G FV LPW KVT +FNL RL EQ+N+T+ A +LYRL++FKFPDY+D      
Sbjct: 507  LFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNNTKTASILYRLILFKFPDYIDAYLRLA 566

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    IQ S+ELVGDALK ++K  N+L MLG+LE+K      +++VKA+ TF+   +
Sbjct: 567  AIAKARNNIQLSIELVGDALKVNDKGPNSLCMLGDLELK-----NDDWVKAKETFRSASD 621

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   +RS+ + P       EK +E+Y  VL +   N+YAANG 
Sbjct: 622  ATDGKDSYATLSLGNWNYFAAIRSEKRAPKLEATHLEKAKELYTRVLVQHNANLYAANGA 681

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
            G+VLAE G FDV+KDIFTQVQEAA+G++FVQMPDVW+NLAHVYFAQ  F+LAVKMYQNCL
Sbjct: 682  GVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAVKMYQNCL 741

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KFY+ TD+ +LLYLART+Y+AEQWQDCKKTLLRAIHLAPSNY  RFDAG+AMQKFSAST
Sbjct: 742  RKFYYNTDSQVLLYLARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDAGVAMQKFSAST 801

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK K+TADEVR  +++L++A+ IFSQLS  ++ H HGF+EKK++THV YC+++L+AAK 
Sbjct: 802  LQKTKRTADEVRSTVAELKNAVRIFSQLSAASNLHFHGFDEKKIETHVGYCKHLLEAAKV 861

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            H  AAER+E Q R + ELARQ NL        +EQRK  Q ER               +F
Sbjct: 862  HCEAAEREELQNRHRVELARQVNLAEEARRKAEEQRKF-QLERRKQEDELKRVMQQEQHF 920

Query: 1440 ARVKEQWRTGGKGGEDGSDSQPXXXXXXXXXXXXXXXXXXXXXNSKQHDSPLQGSDVGED 1619
             RVKEQW++     +    SQ                      +  ++DS    +D  +D
Sbjct: 921  ERVKEQWKSNNLNSKRKERSQIDDDEGGQSERRRRKGGKRRKKDKSRYDSEEARADAMDD 980

Query: 1620 DEDVMAKKPEXXXXXXXXXXXXXXXXGEMN-------------------ASISKKSRRRP 1742
             +++  +                   GE +                   A  S  +RR+ 
Sbjct: 981  QDEMEDEDTNMNHRESTNQMNNQDDDGEDDAQDLLAAAGLEDSDAEDDMAGPSSGNRRKR 1040

Query: 1743 AYSDSEDDMTIERHNAQENVEAYEPDFQEEHEAYEPQFQEPDGDNA 1880
            A+S+S++D   ++      V     + QE     +    +P+GD A
Sbjct: 1041 AWSESDEDEPQDQRPESSPVRENSAEVQESDGEIKDDNDKPNGDAA 1086


>gb|EMJ05100.1| hypothetical protein PRUPE_ppa015419mg, partial [Prunus persica]
          Length = 1003

 Score =  540 bits (1392), Expect = e-151
 Identities = 294/646 (45%), Positives = 394/646 (60%), Gaps = 10/646 (1%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIE+LNN+GVLHFERGEFELAQ+ F EALGDG+W+   +G+   P + +++     +++ 
Sbjct: 357  PIEVLNNLGVLHFERGEFELAQQTFREALGDGIWLAFIDGKEKPPSIDANASISQYKDVH 416

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            IF +LE+EG  V LPW KVTT+FNL RL EQ+++ E A +LYRL++FK+PDYVD      
Sbjct: 417  IFHQLEKEGHLVELPWNKVTTLFNLARLLEQLHNIETASILYRLILFKYPDYVDAYLRLA 476

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                     Q S+ELV DALK + K  NAL MLG+LE+K      +++VKA+ TF+   E
Sbjct: 477  ALAKARNNFQLSIELVNDALKVNNKCPNALLMLGDLELK-----NDDWVKAKETFRAASE 531

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   +R++ + P       EK +E+Y  VL +   N+YAANG 
Sbjct: 532  ATEGKDSYATLSLGNWNYFAAIRNEKRAPKLEATHLEKAKELYTKVLAQHSANLYAANGA 591

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
            G+V AE G FDV+KDIFTQVQEAA+GNIFVQMPDVW+NLAHVYFAQ  F+LAVKMYQNCL
Sbjct: 592  GVVFAEKGHFDVSKDIFTQVQEAASGNIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCL 651

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KF++ TD+ ILLYLART+Y+AEQWQDCKK LLRAIHLAPSNY  RFDAG+ MQKFSAST
Sbjct: 652  RKFFNNTDSQILLYLARTHYEAEQWQDCKKNLLRAIHLAPSNYTLRFDAGVVMQKFSAST 711

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK KK+ DEVR  +++LE+A+ +F QLS  +S H HGF+EKK+DTHV YC ++L+AA+ 
Sbjct: 712  LQKPKKSVDEVRSTVAELENAVRLFRQLSAASSLHFHGFDEKKIDTHVEYCSHLLEAARV 771

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            H   AE +EQ+ R K E+ARQ  L        +EQRK  Q ER                F
Sbjct: 772  HFKVAEHEEQKIRHKQEVARQMALAEEARRKAEEQRKF-QLERRLQEDELKRVRQQEEQF 830

Query: 1440 ARVKEQWRT---GGKGGEDGSDSQPXXXXXXXXXXXXXXXXXXXXXNSKQHDSPLQGSDV 1610
             RVKEQW++   G K  E                            +  ++D+    +D+
Sbjct: 831  ERVKEQWKSSTPGSKRRERSEMDDEEGGNGEKRRRKGGKRRKKDKYSRSRYDTLEAEADM 890

Query: 1611 GEDDEDVMAKKPEXXXXXXXXXXXXXXXXGEMNASISKKSRRRPAY------SDSEDDMT 1772
             ED E++  +                   G+MN    +++ + P        SD+ED++ 
Sbjct: 891  MEDQEELEDEDAN---------TNYREPTGQMNEQDDEENVQDPLAAAGLEDSDAEDEVA 941

Query: 1773 IERHNAQENVEAYEPDFQEEHEAYEPQFQEPDGDNAAVLASEADAK 1910
                       A+     +E +  +P    P  +N+A L S+ + +
Sbjct: 942  APSTTTVRRRRAWSESDDDEQQERQPG-SSPVRENSAELRSDGEGR 986


>ref|XP_006587039.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1089

 Score =  538 bits (1387), Expect = e-150
 Identities = 275/489 (56%), Positives = 347/489 (70%), Gaps = 1/489 (0%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIELLNNIGVL FERGEFELAQ+ F EALGDGVW+   N      +  ++S +L  +++ 
Sbjct: 447  PIELLNNIGVLQFERGEFELAQQTFKEALGDGVWLSFINEEKKSSIDAATS-TLQFKDMK 505

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            +F +LE  G  V +PW+KVT +FNL RL EQ+ND+  A +LYRL++FK+PDY+D      
Sbjct: 506  LFHDLESNGHHVEVPWDKVTVLFNLARLLEQLNDSGTASILYRLVLFKYPDYIDAYLRLA 565

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    I  S+ELV DALK + K  NALSMLG LE+K      +++VKA+ T +   +
Sbjct: 566  AIAKARNNILLSIELVNDALKVNNKCPNALSMLGELELK-----NDDWVKAKETLRAASD 620

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA++ LGNW Y   VR++ ++P       EK +E+Y  VL +   N+YAANG 
Sbjct: 621  ATEGKDSYASLSLGNWNYFAAVRNEKRNPKLEATHLEKAKELYTRVLIQHSSNLYAANGA 680

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
             +VLAE G FDV+KDIFTQVQEAA+G++FVQMPDVW+NLAHVYFAQ  F+LAVKMYQNCL
Sbjct: 681  AVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFTLAVKMYQNCL 740

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KFYH TD+ ILLYLART+Y+AEQWQDC KTLLRAIHLAPSNY  RFDAG+AMQKFSAST
Sbjct: 741  RKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSAST 800

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK K+TADEVR  +++L++A+ +FSQLS  ++ H HGF+EKK+DTHV YC ++L AAK 
Sbjct: 801  LQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFDEKKIDTHVGYCNHLLSAAKV 860

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            HL AAER+EQQ RQ+ ELARQ           +EQRK  Q ER               +F
Sbjct: 861  HLEAAEREEQQVRQRQELARQVAFAEEARRKAEEQRKF-QMERRKQEDELKRVQQQEEHF 919

Query: 1440 ARVKEQWRT 1466
             RVKEQW++
Sbjct: 920  RRVKEQWKS 928


>ref|XP_004513475.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform X2
            [Cicer arietinum]
          Length = 956

 Score =  538 bits (1387), Expect = e-150
 Identities = 297/623 (47%), Positives = 385/623 (61%), Gaps = 14/623 (2%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIELLNNIGVL FERGEFELA++ F EALGDG+W+   +      +  ++S +L  +++ 
Sbjct: 323  PIELLNNIGVLQFERGEFELAKQTFKEALGDGIWLSFFSETNKSSIDAATS-TLQFKDMQ 381

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            +F +LE  G  + +PW+KVT +FNLGRL EQ+N++  A +LYRL++FK+PDY+D      
Sbjct: 382  LFHDLESNGHHIDVPWDKVTVLFNLGRLLEQLNESGTASILYRLILFKYPDYIDAYLRLA 441

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    I  S+ELV DALK ++K  NALSMLG LE+K      +++VKA+ T +   +
Sbjct: 442  AIAKARNNILLSIELVNDALKVNDKCPNALSMLGELELK-----NDDWVKAKETLRAASD 496

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   VR++ ++P       EK +E+Y  VL +   N+YAANG 
Sbjct: 497  ATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAKELYTRVLIQHSANLYAANGA 556

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
             +V AE G FDV+KDIFTQVQEAA+G++FVQMPDVW+NLAHVYFAQ  F+LAVKMYQNCL
Sbjct: 557  AVVFAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFTLAVKMYQNCL 616

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KFYH TD+ +LLYLART+Y+AEQWQDC KTL RAIHLAPSNY  RFDAG+AMQKFSAST
Sbjct: 617  RKFYHNTDSQVLLYLARTHYEAEQWQDCIKTLQRAIHLAPSNYTLRFDAGVAMQKFSAST 676

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK K+TADEVR  ++ L++A+ IFSQLS  ++ H HGF+EKK+DTHV YC ++L AAK 
Sbjct: 677  LQKAKRTADEVRATVAGLQNAVRIFSQLSAASNLHIHGFDEKKIDTHVGYCTHLLSAAKV 736

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            HL AAER+EQQ R++HELARQ  L        +EQRK  Q ER               +F
Sbjct: 737  HLEAAEREEQQIRERHELARQVALAEDARRKAEEQRKF-QMERRKQEDEIKQVQQQEEHF 795

Query: 1440 ARVKEQWR--TGGKGGEDGSDSQPXXXXXXXXXXXXXXXXXXXXXNSKQHDSPLQGS--D 1607
             RVKEQW+  T  K  E   D                         S+     ++    D
Sbjct: 796  KRVKEQWKSSTHSKRRERSDDEDGGGAGEKKRRKGGKKRKKDKHSKSRNDTEEMEADMMD 855

Query: 1608 VGEDDEDVMAKKPEXXXXXXXXXXXXXXXXGEMNAS---------ISKKSRRRPAYSDSE 1760
              E ++D    +P+                  +  S          S  SRRR A S+S+
Sbjct: 856  EQEMEDDADMNEPQTQMNDVEENPHGLLAAAGLEDSDAEDEPVGPSSTISRRRQALSESD 915

Query: 1761 DDMTIERHNAQENVEAYEPDFQE 1829
            DD  I R ++   V  Y  D QE
Sbjct: 916  DDEPIMRQSSP--VREYSADMQE 936


>ref|XP_004513474.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform X1
            [Cicer arietinum]
          Length = 1080

 Score =  538 bits (1387), Expect = e-150
 Identities = 297/623 (47%), Positives = 385/623 (61%), Gaps = 14/623 (2%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIELLNNIGVL FERGEFELA++ F EALGDG+W+   +      +  ++S +L  +++ 
Sbjct: 447  PIELLNNIGVLQFERGEFELAKQTFKEALGDGIWLSFFSETNKSSIDAATS-TLQFKDMQ 505

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            +F +LE  G  + +PW+KVT +FNLGRL EQ+N++  A +LYRL++FK+PDY+D      
Sbjct: 506  LFHDLESNGHHIDVPWDKVTVLFNLGRLLEQLNESGTASILYRLILFKYPDYIDAYLRLA 565

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    I  S+ELV DALK ++K  NALSMLG LE+K      +++VKA+ T +   +
Sbjct: 566  AIAKARNNILLSIELVNDALKVNDKCPNALSMLGELELK-----NDDWVKAKETLRAASD 620

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   VR++ ++P       EK +E+Y  VL +   N+YAANG 
Sbjct: 621  ATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAKELYTRVLIQHSANLYAANGA 680

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
             +V AE G FDV+KDIFTQVQEAA+G++FVQMPDVW+NLAHVYFAQ  F+LAVKMYQNCL
Sbjct: 681  AVVFAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFTLAVKMYQNCL 740

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KFYH TD+ +LLYLART+Y+AEQWQDC KTL RAIHLAPSNY  RFDAG+AMQKFSAST
Sbjct: 741  RKFYHNTDSQVLLYLARTHYEAEQWQDCIKTLQRAIHLAPSNYTLRFDAGVAMQKFSAST 800

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK K+TADEVR  ++ L++A+ IFSQLS  ++ H HGF+EKK+DTHV YC ++L AAK 
Sbjct: 801  LQKAKRTADEVRATVAGLQNAVRIFSQLSAASNLHIHGFDEKKIDTHVGYCTHLLSAAKV 860

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            HL AAER+EQQ R++HELARQ  L        +EQRK  Q ER               +F
Sbjct: 861  HLEAAEREEQQIRERHELARQVALAEDARRKAEEQRKF-QMERRKQEDEIKQVQQQEEHF 919

Query: 1440 ARVKEQWR--TGGKGGEDGSDSQPXXXXXXXXXXXXXXXXXXXXXNSKQHDSPLQGS--D 1607
             RVKEQW+  T  K  E   D                         S+     ++    D
Sbjct: 920  KRVKEQWKSSTHSKRRERSDDEDGGGAGEKKRRKGGKKRKKDKHSKSRNDTEEMEADMMD 979

Query: 1608 VGEDDEDVMAKKPEXXXXXXXXXXXXXXXXGEMNAS---------ISKKSRRRPAYSDSE 1760
              E ++D    +P+                  +  S          S  SRRR A S+S+
Sbjct: 980  EQEMEDDADMNEPQTQMNDVEENPHGLLAAAGLEDSDAEDEPVGPSSTISRRRQALSESD 1039

Query: 1761 DDMTIERHNAQENVEAYEPDFQE 1829
            DD  I R ++   V  Y  D QE
Sbjct: 1040 DDEPIMRQSSP--VREYSADMQE 1060


>gb|ESW10664.1| hypothetical protein PHAVU_009G228100g [Phaseolus vulgaris]
          Length = 1082

 Score =  538 bits (1386), Expect = e-150
 Identities = 293/609 (48%), Positives = 383/609 (62%), Gaps = 13/609 (2%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIELLNN+GVL FERGEFELAQ+ F EALGDG+W    N      V  ++S +L  +++ 
Sbjct: 447  PIELLNNVGVLQFERGEFELAQQTFKEALGDGIWQSFINEEKKSSVDAATS-TLQFKDMQ 505

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            +F + E  G  V +P +KVT +FNL RL EQ+N++  A +LYRL++FK+PDY+D      
Sbjct: 506  LFHDFESNGHHVEVPLDKVTVLFNLARLLEQLNESGTASILYRLILFKYPDYIDAYLRLA 565

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    I  S+ELV DALK ++K  NALSMLG LE+K      +++VKA+ T +   +
Sbjct: 566  AIAKDRNNILLSIELVNDALKVNDKCPNALSMLGELELK-----NDDWVKAKETLRAASD 620

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   VR++ ++P       EK +E+Y  VL +   N+YAANG 
Sbjct: 621  ATEGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAKELYTRVLIQHSSNLYAANGA 680

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
             +VLAE G FDV+KDIFTQVQEAA+G++FVQMPDVW+NLAHVYFAQ  F+LAVKMYQNCL
Sbjct: 681  AVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAVKMYQNCL 740

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KFYH TD+ ILLYLART+Y+AEQWQDC KTLLRAIHLAPSNY  RFDAG+AMQKFSAST
Sbjct: 741  RKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSAST 800

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK K+TADEVR  +++L++A+ +FSQLS  ++ H HGF+EKK+DTHV YC ++L AAK 
Sbjct: 801  LQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFDEKKIDTHVGYCTHLLTAAKV 860

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            HL AAER+EQQ RQ+ ELARQ  L        +EQRK  Q ER               +F
Sbjct: 861  HLEAAEREEQQVRQRQELARQVALAEEARRKAEEQRKF-QMERRKQEDELKRVQQQEEHF 919

Query: 1440 ARVKEQWRTG--GKGGEDGSDSQPXXXXXXXXXXXXXXXXXXXXXNSKQHDSP----LQG 1601
             RVKEQW++    K  E   D +                      +    + P    +  
Sbjct: 920  KRVKEQWKSNSHSKRRERSDDEEGGTGEKKKRKSGKKRKKDKHSKSRYDTEEPEADMMDE 979

Query: 1602 SDVGEDDEDVMAKKPE------XXXXXXXXXXXXXXXXGEMNASISKKSRRRPAYSDSED 1763
             ++ +++ DV  ++P+                       EM A  S  +RRR A S+SED
Sbjct: 980  QEMEDEEGDVYREEPQTHGEENAHGLLAAAGLEDSDADEEMGAPSSSIARRRQALSESED 1039

Query: 1764 DMTIERHNA 1790
            D  + R ++
Sbjct: 1040 DEPLRRQSS 1048


>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1088

 Score =  529 bits (1362), Expect = e-147
 Identities = 271/489 (55%), Positives = 343/489 (70%), Gaps = 1/489 (0%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIELLNNIGVL FERGEFELA++ F EALGDGVW+   N      +  ++S +L  +++ 
Sbjct: 447  PIELLNNIGVLQFERGEFELARQTFKEALGDGVWLSFINEENKSSIDAATS-TLQFKDMQ 505

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            +F +LE  G  V +PW+KVT +FNL RL EQ+ D+  A + YRL++FK+PDY+D      
Sbjct: 506  LFHDLESNGHHVEVPWDKVTVLFNLARLLEQLYDSGTASIFYRLILFKYPDYIDAYLRLA 565

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    I  S+ELV DALK + K  NALSMLG LE+K      +++VKA+ T +   +
Sbjct: 566  AIAKARNNILLSIELVNDALKVNNKCPNALSMLGELELK-----NDDWVKAKETLRTASD 620

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   VR++ ++P       EK +E+   VL +   N+YAANG 
Sbjct: 621  ATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAKELCTRVLIQHSSNLYAANGA 680

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
             +VLAE G FDV+KDIFTQVQEAA+G++FVQMPDVW+NLAHVYFAQ  F+LAVKMYQNCL
Sbjct: 681  AVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFTLAVKMYQNCL 740

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KFYH TD+ ILLYLART+Y+AEQWQDC KTLLRAIHLAPSNY  RFDAG+AMQKFSAST
Sbjct: 741  RKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSAST 800

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK K+TADEVR  +++L++A+ +FSQLS  ++ H HGF+EKK+DTHV YC ++L AAK 
Sbjct: 801  LQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFDEKKIDTHVGYCNHLLSAAKV 860

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            HL AAE +EQQ RQ+ ELARQ  L        +EQRK  Q ER               +F
Sbjct: 861  HLEAAEHEEQQVRQRQELARQVALAEEARRKAEEQRKF-QMERRKQEDELKRVQKQEEHF 919

Query: 1440 ARVKEQWRT 1466
             RVKEQW++
Sbjct: 920  RRVKEQWKS 928


>gb|EOY30289.1| Binding isoform 1 [Theobroma cacao]
          Length = 1094

 Score =  528 bits (1360), Expect = e-147
 Identities = 296/644 (45%), Positives = 391/644 (60%), Gaps = 35/644 (5%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIE+LNNIGVLHFER EFELA  +  +ALGDG+W+ +   +    V+ +S+  L  +++ 
Sbjct: 447  PIEVLNNIGVLHFEREEFELALESLNKALGDGIWLILTGNKPKSYVIEASASILDYKDMQ 506

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            +F  LEE+G  V LPW KVT VFNL RL EQ+++T  A +LY L++FK+PDYVD      
Sbjct: 507  LFHRLEEDGLPVELPWNKVTVVFNLARLHEQLHNTGTANILYHLILFKYPDYVDAYLRLA 566

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    +Q S+ELV +ALK ++K  NALSMLG+LE+K      +++VKA+ TF+   +
Sbjct: 567  AIAKARSNLQLSIELVNEALKVNDKCPNALSMLGDLELK-----NDDWVKAKETFRSASD 621

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   +R++ + P       EK +E+Y  VL +   N+YAANG 
Sbjct: 622  ATDGKDSYAILSLGNWNYFAAIRNEKRAPKLEATHLEKAKELYTRVLVQHTANLYAANGA 681

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
            G+VLAE G FDV+KDIFTQVQEAA+G++FVQMPDVW+NLAHV+FAQ  F+LAVKMYQNCL
Sbjct: 682  GVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVFFAQGNFALAVKMYQNCL 741

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KFY+ TD+ ILLYLART+Y+AEQWQ+CKKTLLRAIHLAPSNY  RFDAG+AMQKFS ST
Sbjct: 742  RKFYYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLAPSNYTLRFDAGVAMQKFSTST 801

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK+K+TADEVR  +++LE+A+ IFSQLS  ++ H HGF+EKK++THV YC+++L AAK 
Sbjct: 802  LQKEKRTADEVRSTVAELENAVRIFSQLSAASNLHLHGFDEKKINTHVEYCKHLLVAAKV 861

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            H  AAER+EQQ RQK E ARQ  L        +EQRK    ER               +F
Sbjct: 862  HREAAEREEQQNRQKQEAARQLALAEEARRKAEEQRK-YLLERRKQEDEQKRLQQAEEHF 920

Query: 1440 ARVKEQWRT-----------------GG------KGGE-----------DGSDSQPXXXX 1517
             RV+EQW++                 GG      KGG+           +  D +P    
Sbjct: 921  KRVQEQWKSSTPASKRRERSEVDDEDGGHSEKRRKGGKRRKKDKNKSRYERDDEEPYMMD 980

Query: 1518 XXXXXXXXXXXXXXXXXNSKQHDSPLQGSDVGEDDEDVMAKKPEXXXXXXXXXXXXXXXX 1697
                              ++ +D   Q  D GE+ +D++A                    
Sbjct: 981  DREELGDEDANMNYEESTTQMND---QDDDNGENAQDLLA---------AAGLEDSDVED 1028

Query: 1698 GEMNASISKKSRRRPAYSDSEDDMTIERHNAQENVEAYEPDFQE 1829
                A  S   RRR A+S+S+DD  + R      V     + QE
Sbjct: 1029 EAAAAPSSAAGRRRRAWSESDDDEPLHRGTESSPVRENSAELQE 1072


>ref|XP_006381640.1| phosphoprotein [Populus trichocarpa] gi|550336348|gb|ERP59437.1|
            phosphoprotein [Populus trichocarpa]
          Length = 1086

 Score =  527 bits (1358), Expect = e-147
 Identities = 294/655 (44%), Positives = 395/655 (60%), Gaps = 27/655 (4%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIE+LNNI V+HFER E ELA + F EALGDG+W+    G+ +   V ++S  L  +++ 
Sbjct: 444  PIEVLNNIAVIHFEREELELALQNFKEALGDGIWLTFLEGKANTYEVDATSSLLQYKDMQ 503

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            IF+ LEEEG  V L W KVTT+FNL RL EQ+++TE A  LYRL++FK+PDYVD      
Sbjct: 504  IFRRLEEEGHSVELSWNKVTTLFNLARLLEQLHNTETASTLYRLILFKYPDYVDAYLRLA 563

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    +  S+ELV +AL  ++K  NALSMLG+LE+K      +++VKA+ TF+   E
Sbjct: 564  AIAKARNNLPLSIELVNEALTVNDKCPNALSMLGDLELK-----NDDWVKAKETFRAASE 618

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   +R++ ++P       EK +E+Y  VL +   N+YAANG 
Sbjct: 619  ATDGKDSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKAKELYTRVLVQHTANLYAANGA 678

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
            G+VLAE G FDV+KD+FTQVQEAA+G+IFVQMPDVW+NLAHVYFAQ  F+LAVKMYQNCL
Sbjct: 679  GVVLAEKGHFDVSKDLFTQVQEAASGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCL 738

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KF++ TD+ ILLYLART+Y+AEQWQDCK+TLLRAIHL PSNY  RFDAG+AMQKFSAST
Sbjct: 739  QKFFYNTDSQILLYLARTHYEAEQWQDCKRTLLRAIHLTPSNYTLRFDAGVAMQKFSAST 798

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK K+T DEVR  + +LE+A+ +FSQLS  ++ + +GF+EKK++THV YC+++L+AA  
Sbjct: 799  LQKTKRTVDEVRSTVDELENAVRLFSQLSAASNLYFNGFDEKKINTHVEYCKHLLEAAIV 858

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            H  AAER+EQQ RQ+ +LARQ  L        +EQRK  Q ER               +F
Sbjct: 859  HREAAEREEQQNRQRLDLARQMALAEEARRKAEEQRKF-QLERRKQEDELKRVRQQEEHF 917

Query: 1440 ARVKEQWRTG--------------GKGGEDGSDSQPXXXXXXXXXXXXXXXXXXXXXNSK 1577
             RVKEQW++               G+GG      +                         
Sbjct: 918  ERVKEQWKSSTSASKRRDRADIDDGEGGHGEKRRRKGGKRRKKEKSSRSRYEMEEADMMD 977

Query: 1578 QHDSPLQGSDVGEDDEDVMAKKP------------EXXXXXXXXXXXXXXXXGEMNASIS 1721
             HD P       +DD +V  ++P            E                 +  A+ S
Sbjct: 978  DHDEP------EDDDANVNFREPGYQMNDQDDNAEENAQDVLAAAGLEDSDADDDAAAPS 1031

Query: 1722 KKSRRRPAYSDSEDDMTIERHNAQENVEAYEPDFQEEHEAYEPQFQEPDGDNAAV 1886
               RR+ A+S+S++D   ER      +     D Q+     + +F++   +NAAV
Sbjct: 1032 SAGRRKRAWSESDEDEISERKPQSSLLRENSADLQDS----DGEFRDKRQENAAV 1082


>ref|XP_006490821.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Citrus
            sinensis]
          Length = 1088

 Score =  527 bits (1357), Expect = e-146
 Identities = 261/489 (53%), Positives = 346/489 (70%), Gaps = 1/489 (0%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIE+LNNIGV+HFE+GEFE A ++F +ALGDG+W+ + + +    V+ +S+  L  +++ 
Sbjct: 447  PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTNVIDASASMLQFKDMQ 506

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            +F   E +G  V LPW KVT +FNL RL EQ++DT  A +LYRL++FK  DYVD      
Sbjct: 507  LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKHQDYVDAYLRLA 566

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    +Q S+ELV +ALK + K  NALSMLG+LE+K      +++VKA+ TF+   +
Sbjct: 567  AIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELK-----NDDWVKAKETFRAASD 621

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   +R++ + P       EK +E+Y  V+ +   N+YAANG 
Sbjct: 622  ATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGA 681

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
            G+VLAE G FDV+KD+FTQVQEAA+G++FVQMPDVW+NLAHVYFAQ  F+LA+KMYQNCL
Sbjct: 682  GVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KFY+ TD  ILLYLART+Y+AEQWQDCKK+LLRAIHLAPSNY  RFDAG+AMQKFSAST
Sbjct: 742  RKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAST 801

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK ++TADEVR  +++LE+A+ +FS LS  ++ H HGF+EKK++THV YC+++LDAAK 
Sbjct: 802  LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKI 861

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            H  AAER+EQQ RQ+ E ARQ  L        +EQ+K    E+               +F
Sbjct: 862  HREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKK-YLLEKRKLEDEQKRLRQQEEHF 920

Query: 1440 ARVKEQWRT 1466
             RVKEQWR+
Sbjct: 921  QRVKEQWRS 929


>ref|XP_006451561.1| hypothetical protein CICLE_v10007295mg [Citrus clementina]
            gi|557554787|gb|ESR64801.1| hypothetical protein
            CICLE_v10007295mg [Citrus clementina]
          Length = 1088

 Score =  527 bits (1357), Expect = e-146
 Identities = 261/489 (53%), Positives = 346/489 (70%), Gaps = 1/489 (0%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIE+LNNIGV+HFE+GEFE A ++F +ALGDG+W+ + + +    V+ +S+  L  +++ 
Sbjct: 447  PIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIWLTLLDSKTKTNVIDASASMLQFKDMQ 506

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            +F   E +G  V LPW KVT +FNL RL EQ++DT  A +LYRL++FK  DYVD      
Sbjct: 507  LFHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKHQDYVDAYLRLA 566

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    +Q S+ELV +ALK + K  NALSMLG+LE+K      +++VKA+ TF+   +
Sbjct: 567  AIAKARNNLQLSIELVNEALKVNGKYPNALSMLGDLELK-----NDDWVKAKETFRAASD 621

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   +R++ + P       EK +E+Y  V+ +   N+YAANG 
Sbjct: 622  ATDGKDSYATLSLGNWNYFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGA 681

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
            G+VLAE G FDV+KD+FTQVQEAA+G++FVQMPDVW+NLAHVYFAQ  F+LA+KMYQNCL
Sbjct: 682  GVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCL 741

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KFY+ TD  ILLYLART+Y+AEQWQDCKK+LLRAIHLAPSNY  RFDAG+AMQKFSAST
Sbjct: 742  RKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSNYTLRFDAGVAMQKFSAST 801

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK ++TADEVR  +++LE+A+ +FS LS  ++ H HGF+EKK++THV YC+++LDAAK 
Sbjct: 802  LQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHGFDEKKINTHVEYCKHLLDAAKI 861

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            H  AAER+EQQ RQ+ E ARQ  L        +EQ+K    E+               +F
Sbjct: 862  HREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKK-YLLEKRKLEDEQKRLRQQEEHF 920

Query: 1440 ARVKEQWRT 1466
             RVKEQWR+
Sbjct: 921  QRVKEQWRS 929


>gb|EOY30291.1| Binding isoform 3, partial [Theobroma cacao]
          Length = 814

 Score =  526 bits (1356), Expect = e-146
 Identities = 268/489 (54%), Positives = 348/489 (71%), Gaps = 1/489 (0%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIE+LNNIGVLHFER EFELA  +  +ALGDG+W+ +   +    V+ +S+  L  +++ 
Sbjct: 323  PIEVLNNIGVLHFEREEFELALESLNKALGDGIWLILTGNKPKSYVIEASASILDYKDMQ 382

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            +F  LEE+G  V LPW KVT VFNL RL EQ+++T  A +LY L++FK+PDYVD      
Sbjct: 383  LFHRLEEDGLPVELPWNKVTVVFNLARLHEQLHNTGTANILYHLILFKYPDYVDAYLRLA 442

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    +Q S+ELV +ALK ++K  NALSMLG+LE+K      +++VKA+ TF+   +
Sbjct: 443  AIAKARSNLQLSIELVNEALKVNDKCPNALSMLGDLELK-----NDDWVKAKETFRSASD 497

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   +R++ + P       EK +E+Y  VL +   N+YAANG 
Sbjct: 498  ATDGKDSYAILSLGNWNYFAAIRNEKRAPKLEATHLEKAKELYTRVLVQHTANLYAANGA 557

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
            G+VLAE G FDV+KDIFTQVQEAA+G++FVQMPDVW+NLAHV+FAQ  F+LAVKMYQNCL
Sbjct: 558  GVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVFFAQGNFALAVKMYQNCL 617

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KFY+ TD+ ILLYLART+Y+AEQWQ+CKKTLLRAIHLAPSNY  RFDAG+AMQKFS ST
Sbjct: 618  RKFYYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLAPSNYTLRFDAGVAMQKFSTST 677

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK+K+TADEVR  +++LE+A+ IFSQLS  ++ H HGF+EKK++THV YC+++L AAK 
Sbjct: 678  LQKEKRTADEVRSTVAELENAVRIFSQLSAASNLHLHGFDEKKINTHVEYCKHLLVAAKV 737

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            H  AAER+EQQ RQK E ARQ  L        +EQRK    ER               +F
Sbjct: 738  HREAAEREEQQNRQKQEAARQLALAEEARRKAEEQRK-YLLERRKQEDEQKRLQQAEEHF 796

Query: 1440 ARVKEQWRT 1466
             RV+EQW++
Sbjct: 797  KRVQEQWKS 805


>gb|EXB38929.1| RNA polymerase-associated protein CTR9-like protein [Morus notabilis]
          Length = 1107

 Score =  523 bits (1347), Expect = e-145
 Identities = 268/513 (52%), Positives = 351/513 (68%), Gaps = 19/513 (3%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFE----------------LAQRAFLEALGDGVWMDIANGRMHF 134
            PIE+LNN+GVLHFERGEFE                LAQ+ F EALGDG+W+   +G+ + 
Sbjct: 447  PIEVLNNLGVLHFERGEFEVGAVSQEYFGSLYAVVLAQQTFREALGDGIWLAFIDGKENP 506

Query: 135  PVVGSSSFSLLSRNIDIFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRL 314
            P V +S+ +L  +++ +FQ LE+EG  V LPW KVTT+FN+ RL EQ+++TE A +LYRL
Sbjct: 507  PPVDASASNLQYKDLHLFQHLEKEGRVVDLPWNKVTTLFNMARLLEQLHNTETASILYRL 566

Query: 315  LVFKFPDYVDXXXXXXXXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLD 494
            ++FK+PDY+D              +Q S+ELV DA+K ++K   ALSMLG+LE+K     
Sbjct: 567  ILFKYPDYIDAYLRLAAIAKARNNLQLSIELVNDAMKVNQKCPKALSMLGDLELK----- 621

Query: 495  KENFVKARTTFKLVDEGTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYF 671
             +++VKA+ T +   E T  KDSY  + LGNW Y   VR++ ++P       EK +E+Y 
Sbjct: 622  NDDWVKAKETLRAASEATEGKDSYDTLSLGNWNYFAAVRNEKRNPKLEATHLEKAKELYT 681

Query: 672  NVLTRMPGNIYAANGTGIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYF 851
             VL +   N+YAANG G+V AE G FDV+KDIFTQVQEAA+G+IFVQMPDVW+NLAHVYF
Sbjct: 682  KVLAQHSANLYAANGAGVVFAEKGHFDVSKDIFTQVQEAASGSIFVQMPDVWINLAHVYF 741

Query: 852  AQEQFSLAVKMYQNCLKKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYL 1031
            AQ  F+LAVKMYQNCL+KF++ TD+ ILLYLART Y+AEQWQDCKKTLLRAIHLAPSNY 
Sbjct: 742  AQGNFALAVKMYQNCLRKFFYNTDSQILLYLARTNYEAEQWQDCKKTLLRAIHLAPSNYA 801

Query: 1032 FRFDAGIAMQKFSASTLQKQKKTADEVRQAISDLESALLIFSQLSGITSD--HSHGFNEK 1205
             RFDAG+ MQKFSA TLQK+K+TADEVR  +S+L +A+ +F QLS   +   H +GF+EK
Sbjct: 802  LRFDAGVVMQKFSALTLQKEKRTADEVRLTVSELGNAVRVFKQLSASAASNLHFYGFDEK 861

Query: 1206 KLDTHVSYCRNILDAAKTHLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTE 1385
            K+DTHV YC+++L+AA+ HL  AE +EQ+ R K E  RQ  L        +EQRK  Q E
Sbjct: 862  KIDTHVEYCKHLLEAARVHLKNAEHEEQKNRHKQEALRQMALAEEARRKAEEQRKF-QLE 920

Query: 1386 RIXXXXXXXXXXXXXXNFARVKEQWRTGGKGGE 1484
            R               +F R+KEQW++   G +
Sbjct: 921  RRVREDELKQVRQQEEHFERIKEQWKSSTSGSK 953


>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
          Length = 1056

 Score =  523 bits (1347), Expect = e-145
 Identities = 266/489 (54%), Positives = 347/489 (70%), Gaps = 1/489 (0%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIE+LNNI V+HFER E ELA + F EALGDG+W+    G+ +   V ++S  L  +++ 
Sbjct: 444  PIEVLNNIAVIHFEREELELALQNFKEALGDGIWLTFLEGKANTYEVDATSSLLQYKDMQ 503

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            IF+ LEEEG  V L W KVTT+FNL RL EQ+++TE A  LYRL++FK+PDYVD      
Sbjct: 504  IFRRLEEEGHSVELSWNKVTTLFNLARLLEQLHNTETASTLYRLILFKYPDYVDAYLRLA 563

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    +  S+ELV +AL  ++K  NALSMLG+LE+K      +++VKA+ TF+   E
Sbjct: 564  AIAKARNNLPLSIELVNEALTVNDKCPNALSMLGDLELK-----NDDWVKAKETFRAASE 618

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   +R++ ++P       EK +E+Y  VL +   N+YAANG 
Sbjct: 619  ATDGKDSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKAKELYTRVLVQHTANLYAANGA 678

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
            G+VLAE G FDV+KD+FTQVQEAA+G+IFVQMPDVW+NLAHVYFAQ  F+LAVKMYQNCL
Sbjct: 679  GVVLAEKGHFDVSKDLFTQVQEAASGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCL 738

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KF++ TD+ ILLYLART+Y+AEQWQDCK+TLLRAIHL PSNY  RFDAG+AMQKFSAST
Sbjct: 739  QKFFYNTDSQILLYLARTHYEAEQWQDCKRTLLRAIHLTPSNYTLRFDAGVAMQKFSAST 798

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK K+T DEVR  + +LE+A+ +FSQLS  ++ + +GF+EKK++THV YC+++L+AA  
Sbjct: 799  LQKTKRTVDEVRSTVDELENAVRLFSQLSAASNLYFNGFDEKKINTHVEYCKHLLEAAIV 858

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            H  AAER+EQQ RQ+ +LARQ  L        +EQRK  Q ER               +F
Sbjct: 859  HREAAEREEQQNRQRLDLARQMALAEEARRKAEEQRKF-QLERRKQEDELKRVRQQEEHF 917

Query: 1440 ARVKEQWRT 1466
             RVKEQW++
Sbjct: 918  ERVKEQWKS 926


>ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
            gi|223544778|gb|EEF46294.1| tpr repeat nuclear
            phosphoprotein, putative [Ricinus communis]
          Length = 1065

 Score =  523 bits (1346), Expect = e-145
 Identities = 286/647 (44%), Positives = 393/647 (60%), Gaps = 21/647 (3%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            P+E+LNNIGV++FER E ELA   F EA+GDG+W+   +G+     + +++  L  +++ 
Sbjct: 420  PVEVLNNIGVIYFEREELELALETFKEAVGDGIWLAFLDGKAKTYTIDAAASILHYKDMQ 479

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
             F +LE++G  V L W+KVT +FNL RL EQ+++ E A +LY L++FK+PDYVD      
Sbjct: 480  FFHQLEQDGHRVELTWDKVTALFNLARLLEQMHNIETANVLYVLILFKYPDYVDAYLRLA 539

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    +Q S+ELV +ALK ++K  NALSMLG+LE+K      +++VKA+ TF+   E
Sbjct: 540  AISKARNNLQLSIELVNEALKVNDKCPNALSMLGDLELK-----NDDWVKAKETFRAASE 594

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   +R++ ++P       EK +E+Y  VL +   N+YAANG 
Sbjct: 595  ATDGKDSYAILSLGNWNYFAAIRNEKRNPKLEATHLEKAKELYTRVLVQHTANLYAANGA 654

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
            G+VLAE G FDV+KD+F +VQEAA+G+IFVQMPDVW+NLAHVYFAQ  F+LAVKMYQNCL
Sbjct: 655  GVVLAEKGHFDVSKDLFMEVQEAASGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCL 714

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KFY+ TD+ ILLYLART+Y+AEQWQ+CKKTLLRAIHLAPSNY+ RFDAG+AMQKFSAST
Sbjct: 715  RKFYYSTDSQILLYLARTHYEAEQWQECKKTLLRAIHLAPSNYILRFDAGVAMQKFSAST 774

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK K+T DEVR  + +LE+A+ +FSQLS  ++ H HGF+EKK++THV YC+++L+AAK 
Sbjct: 775  LQKTKRTVDEVRSTVDELENAVRLFSQLSASSNLHFHGFDEKKINTHVEYCKHLLEAAKV 834

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            H  AAER+EQQ RQ+ E+ARQ  L        +EQ+K    E+               +F
Sbjct: 835  HREAAEREEQQNRQRQEVARQMALAEEARRKAEEQKKF-LLEKRKQEDELKRVRQQEEHF 893

Query: 1440 ARVKEQWRTGGKGGE--DGSDSQPXXXXXXXXXXXXXXXXXXXXXNSKQHDSPLQG-SDV 1610
             RVKEQW+T   G +  D S+                        +SK      +G +D+
Sbjct: 894  ERVKEQWKTSTPGSKRRDRSEVDEEEGGHSEKRRRKGGKRRKKEKSSKSRYEIEEGEADM 953

Query: 1611 GEDDEDVMAKKPEXXXXXXXXXXXXXXXXGEMN-----------------ASISKKSRRR 1739
             +D E++  +                    E N                 A+ S  +RRR
Sbjct: 954  MDDREELEDEDANVNYGEHKNRLDNQDEDAEENAQDLLAAAGLEDSDAEDAAPSSTARRR 1013

Query: 1740 PAYSDSEDDMTIERHNAQENVEAYEPDFQEEHEAYEPQFQEPDGDNA 1880
             A S+S+DD  ++       V     + QE          +  GD A
Sbjct: 1014 RALSESDDDEVLDSKLQSSPVRGNSAELQESDGEIREGADKQYGDAA 1060


>gb|EOY30290.1| Binding isoform 2 [Theobroma cacao]
          Length = 925

 Score =  522 bits (1344), Expect = e-145
 Identities = 268/490 (54%), Positives = 348/490 (71%), Gaps = 2/490 (0%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWMDIANGRMHFPVVGSSSFSLLSRNID 182
            PIE+LNNIGVLHFER EFELA  +  +ALGDG+W+ +   +    V+ +S+  L  +++ 
Sbjct: 323  PIEVLNNIGVLHFEREEFELALESLNKALGDGIWLILTGNKPKSYVIEASASILDYKDMQ 382

Query: 183  IFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTEKACLLYRLLVFKFPDYVDXXXXXX 362
            +F  LEE+G  V LPW KVT VFNL RL EQ+++T  A +LY L++FK+PDYVD      
Sbjct: 383  LFHRLEEDGLPVELPWNKVTVVFNLARLHEQLHNTGTANILYHLILFKYPDYVDAYLRLA 442

Query: 363  XXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNLEVKAESLDKENFVKARTTFKLVDE 542
                    +Q S+ELV +ALK ++K  NALSMLG+LE+K      +++VKA+ TF+   +
Sbjct: 443  AIAKARSNLQLSIELVNEALKVNDKCPNALSMLGDLELK-----NDDWVKAKETFRSASD 497

Query: 543  GTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFFEKCREIYFNVLTRMPGNIYAANGT 719
             T  KDSYA + LGNW Y   +R++ + P       EK +E+Y  VL +   N+YAANG 
Sbjct: 498  ATDGKDSYAILSLGNWNYFAAIRNEKRAPKLEATHLEKAKELYTRVLVQHTANLYAANGA 557

Query: 720  GIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVWVNLAHVYFAQEQFSLAVKMYQNCL 899
            G+VLAE G FDV+KDIFTQVQEAA+G++FVQMPDVW+NLAHV+FAQ  F+LAVKMYQNCL
Sbjct: 558  GVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVFFAQGNFALAVKMYQNCL 617

Query: 900  KKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAIHLAPSNYLFRFDAGIAMQKFSAST 1079
            +KFY+ TD+ ILLYLART+Y+AEQWQ+CKKTLLRAIHLAPSNY  RFDAG+AMQKFS ST
Sbjct: 618  RKFYYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLAPSNYTLRFDAGVAMQKFSTST 677

Query: 1080 LQKQKKTADEVRQAISDLESALLIFSQLSGITSDHSHGFNEKKLDTHVSYCRNILDAAKT 1259
            LQK+K+TADEVR  +++LE+A+ IFSQLS  ++ H HGF+EKK++THV YC+++L AAK 
Sbjct: 678  LQKEKRTADEVRSTVAELENAVRIFSQLSAASNLHLHGFDEKKINTHVEYCKHLLVAAKV 737

Query: 1260 HLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQRKSKQTERIXXXXXXXXXXXXXXNF 1439
            H  AAER+EQQ RQK E ARQ  L        +EQRK    ER               +F
Sbjct: 738  HREAAEREEQQNRQKQEAARQLALAEEARRKAEEQRK-YLLERRKQEDEQKRLQQAEEHF 796

Query: 1440 ARV-KEQWRT 1466
             RV +EQW++
Sbjct: 797  KRVQQEQWKS 806


>ref|XP_006342363.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Solanum
            tuberosum]
          Length = 1095

 Score =  519 bits (1336), Expect = e-144
 Identities = 287/651 (44%), Positives = 385/651 (59%), Gaps = 49/651 (7%)
 Frame = +3

Query: 3    PIELLNNIGVLHFERGEFELAQRAFLEALGDGVWM----------DIANGRMHFPVVGSS 152
            PIELLNNIGVLHFER EFELA ++F EALGDG+WM          D  +G + +P   + 
Sbjct: 447  PIELLNNIGVLHFEREEFELATQSFKEALGDGIWMRFLDAKARSDDPTSGGLLYPNGEAQ 506

Query: 153  SFSLLS--------------RNIDIFQELEEEGTFVRLPWEKVTTVFNLGRLFEQVNDTE 290
            S  L S              +++ +F  LEE+G+ V LPW KV+T+FN+ RL EQ++DTE
Sbjct: 507  SDLLKSAQYPIDASASVRQYKDLQLFHRLEEQGSTVELPWNKVSTLFNMARLLEQLHDTE 566

Query: 291  KACLLYRLLVFKFPDYVDXXXXXXXXXXXXXXIQQSLELVGDALKADEKSVNALSMLGNL 470
             A + YRL++FK+P+Y D              +Q S EL+ DALK +EK  +AL MLG+L
Sbjct: 567  TASIFYRLILFKYPEYADAYLRLASIAKARNNVQLSNELISDALKVNEKYPDALLMLGDL 626

Query: 471  EVKAESLDKENFVKARTTFKLVDEGTGSKDSYAAVCLGNWYYHVGVRSDVKDPD-RGKFF 647
            E+K      +++VKA+ TF+   + T   DSYA +CLGNW Y   +R++ + P       
Sbjct: 627  ELK-----NDDWVKAKETFRAAKDATDGNDSYATLCLGNWNYFAAIRNEKRAPKLEATHL 681

Query: 648  EKCREIYFNVLTRMPGNIYAANGTGIVLAENGSFDVAKDIFTQVQEAAAGNIFVQMPDVW 827
            EK +E+Y  VL +   N+YAANG G+VLAE G FD++KD+FTQVQEAA+GN+FVQMPDVW
Sbjct: 682  EKAKELYTKVLFQHNANLYAANGAGVVLAEKGQFDISKDLFTQVQEAASGNVFVQMPDVW 741

Query: 828  VNLAHVYFAQEQFSLAVKMYQNCLKKFYHGTDTNILLYLARTYYQAEQWQDCKKTLLRAI 1007
            +NLAHV+FAQ  F+LAVKMYQNCL+KFY+ TD+ +LLYLART+Y+AEQWQDCKKTLLRAI
Sbjct: 742  INLAHVHFAQGNFALAVKMYQNCLRKFYYNTDSQVLLYLARTHYEAEQWQDCKKTLLRAI 801

Query: 1008 HLAPSNYLFRFDAGIAMQKFSASTLQKQKKTADEVRQAISDLESALLIFSQLSGITSDHS 1187
            HLAPSNY  RFD G+A+QKFSASTLQK K+T DEVR  +++L++A+ +FS LS  ++ H 
Sbjct: 802  HLAPSNYTLRFDTGVALQKFSASTLQKTKRTVDEVRATVAELKNAVRLFSLLSAASNLHV 861

Query: 1188 HGFNEKKLDTHVSYCRNILDAAKTHLGAAERDEQQQRQKHELARQKNLXXXXXXXXDEQR 1367
            HGF+EKK++THV YC+++L+AAK H  AAER++QQ +Q+ ELARQ  L        +EQR
Sbjct: 862  HGFDEKKIETHVGYCKHLLEAAKVHCEAAEREDQQNKQRIELARQVTLAEENRRKAEEQR 921

Query: 1368 KSKQTERIXXXXXXXXXXXXXXNFARVKEQWRTGGKGGEDGSDSQPXXXXXXXXXXXXXX 1547
            K  Q ER               +  R+KEQW++     +     Q               
Sbjct: 922  K-YQLERRKQEDELKQVMQQEQHLERIKEQWKSSTPASKRKDRPQNEDDEGGHGERRRKK 980

Query: 1548 XXXXXXXNSKQHDSPLQGSDVGEDDEDVMAKKPEXXXXXXXXXXXXXXXXGEMN------ 1709
                   + K H    +     +D E+V                       E N      
Sbjct: 981  GGKRRKRDKKSHYESEEAEAEMDDQEEVDDVDRNRNYEESYDQTNDHDDQAENNPQDLLA 1040

Query: 1710 --------------ASISKKSRRRPAYSDSEDDMTIERHNAQ----ENVEA 1808
                          A  S  SRRR A S+S++D  ++R  +     ENV A
Sbjct: 1041 AAGLEDSDAEDDTVAPSSNASRRRQALSESDEDEPLQRQGSDGEDGENVAA 1091