BLASTX nr result

ID: Ephedra25_contig00009036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00009036
         (713 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25219.1| unknown [Picea sitchensis]                              82   2e-13
gb|ABR16492.1| unknown [Picea sitchensis]                              74   4e-11
gb|ABR17776.1| unknown [Picea sitchensis]                              74   5e-11

>gb|ABK25219.1| unknown [Picea sitchensis]
          Length = 563

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 53/147 (36%), Positives = 86/147 (58%), Gaps = 8/147 (5%)
 Frame = +1

Query: 235 VKLILRFGKQAFYGYKRKSLLGK--TMSVDNVAGIYNVYGLKGRFLMACAEQAVGNLKKS 408
           VKL++RFGKQ   G      LG    +S+  +  +Y    +   F  AC+E A+  ++  
Sbjct: 207 VKLMIRFGKQLLNGPNLYDQLGSGDLISLQRLQEVYRQKRMNYIFSTACSETALRAVRLQ 266

Query: 409 LEKDLGFVRVSNKKKISINCAHAN-----HRFNVSLRT-AGDSSVEGDESSRVLQASDHF 570
           LE+ L +V+VS++KKISI+ A         RFNVS+R  + +  ++  E  R+  A D+F
Sbjct: 267 LEQ-LEYVKVSSRKKISIHVADLEDLGRAQRFNVSVRCDSNEGLLQNSEIKRISGAKDYF 325

Query: 571 EILGVGRDASTEEIKQAYRNSLLKIRF 651
           ++L V R AS +E+++AYR  L++I+F
Sbjct: 326 QVLDVDRAASDQELEKAYRRCLIRIQF 352


>gb|ABR16492.1| unknown [Picea sitchensis]
          Length = 582

 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
 Frame = +1

Query: 235 VKLILRFGKQAFYGYKRKSLL--GKTMSVDNVAGIYNVYGLKGRFLMACAEQAVGNLKKS 408
           +KL++RFGKQ F G         G  +S+ ++  ++    L   F  AC++  V +L+  
Sbjct: 216 IKLMIRFGKQLFDGPNLCDQFHNGGFVSLAHLQELFRGRRLNYFFSTACSKMVVTDLRLQ 275

Query: 409 LEKDLGFVRVSNKKKISINCAHAN-------HRFNVSLRTAG-DSSVEGDESSRVLQASD 564
           LE    +V+VS++KKIS+  A           RFNVS+R      S+   E  R+  A D
Sbjct: 276 LEHT-EYVKVSSRKKISLQVADLEDLEEGHPQRFNVSIRCDDKQGSLHNSELKRIFGAKD 334

Query: 565 HFEILGVGRDASTEEIKQAYRNSLLKIRFRLSDWSSSEKAETTVTAAF 708
           +F++L V R AS  E+++A+R  L++I+F   + ++SE A      A+
Sbjct: 335 YFQVLDVDRGASEHELERAFRRCLIRIQF--DNGATSENAVRVAEEAY 380


>gb|ABR17776.1| unknown [Picea sitchensis]
          Length = 433

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
 Frame = +1

Query: 235 VKLILRFGKQAFYGYKRKSLL--GKTMSVDNVAGIYNVYGLKGRFLMACAEQAVGNLKKS 408
           +KL++RFGKQ F G         G  +S+ ++  ++    L   F  AC++  V +L+  
Sbjct: 67  IKLMIRFGKQLFDGPNLCDQFHNGSFVSLAHLQELFRGRRLNYFFSTACSKMVVTDLRLQ 126

Query: 409 LEKDLGFVRVSNKKKISINCAHAN-------HRFNVSLRTAGDS-SVEGDESSRVLQASD 564
            E    +V+VS++KKIS+  A           RFNVS+R   +  S+   E  R+  A D
Sbjct: 127 FEHT-EYVKVSSRKKISLQVADLEDLEEGHPQRFNVSIRCDDNQGSLHNSELKRIFGAKD 185

Query: 565 HFEILGVGRDASTEEIKQAYRNSLLKIRFRLSDWSSSEKAETTVTAAF 708
           +F++L V R AS  E+++A+R  L++I+F   + ++SE A      A+
Sbjct: 186 YFQVLDVDRGASEHELERAFRRCLIRIQF--DNGATSENAVRVAEEAY 231


Top