BLASTX nr result

ID: Ephedra25_contig00007979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00007979
         (1264 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBA12004.1| putative auxin response factor 5/7, partial [Gne...   103   1e-19

>emb|CBA12004.1| putative auxin response factor 5/7, partial [Gnetum gnemon]
          Length = 881

 Score =  103 bits (258), Expect = 1e-19
 Identities = 91/289 (31%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
 Frame = -3

Query: 758  QIQQMVPNLKMSQNQTLRDLQELQTKEDLTK--QPVVNGTIXXXXXXXXXXXQS--KMPS 591
            Q+ Q  PNLK+ QN  L++LQ+   KE L K  Q  + G+                K P+
Sbjct: 347  QLDQAPPNLKIPQNHQLQELQKSHNKEVLQKLFQHAIPGSAQQRVLMQSHQQMQLPKQPT 406

Query: 590  LTSQPLETH-----------PQNQQILLDH-------------HS----NLNQKQLSTXX 495
            LTSQPL+ H            QNQQI+                HS     LNQK      
Sbjct: 407  LTSQPLDNHLLPQQIQPDQPGQNQQIVQQQLPSNQRVQNQPIMHSAALQQLNQKGSEHSS 466

Query: 494  XXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLISN--HTCDV----EGQLLQSLSSRTNNS 333
                                        SP  ++  H+       EGQLLQ+LS+R+++ 
Sbjct: 467  FTHQQTQLQTTPQIREADGQLLQTISSRSPSENHILHSLSARSHSEGQLLQTLSARSHSG 526

Query: 332  CSLLPQAKSESDMTEAEVSFCSTAMSNIGSQMPSVISK-QICGAVSDEKTRCSRLMKSAT 156
               L   KS+ +++E ++SFCST  S     +PS+++K Q+C    ++K+   R+ ++ T
Sbjct: 527  ---LLSVKSQPELSETDISFCSTTTSTNAGPLPSILTKPQLCNVSMEDKSL--RVPRTGT 581

Query: 155  NNTHG--HAPDQISNQPVGTIISSNKETCTTELKTIPNLLSAAIEKQSV 15
             NT G  H  D IS QPV +++SSNKE    E+K + +LLS+ IE+QS+
Sbjct: 582  LNTDGLSHIADHISQQPVNSLLSSNKEVNHGEMKALTSLLSSEIERQSM 630


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