BLASTX nr result
ID: Ephedra25_contig00007977
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra25_contig00007977 (3349 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004970095.1| PREDICTED: probable ATP-dependent RNA helica... 1066 0.0 ref|XP_002456402.1| hypothetical protein SORBIDRAFT_03g035700 [S... 1063 0.0 ref|NP_001044362.1| Os01g0767700 [Oryza sativa Japonica Group] g... 1051 0.0 ref|XP_006646361.1| PREDICTED: probable ATP-dependent RNA helica... 1044 0.0 ref|XP_003567152.1| PREDICTED: probable ATP-dependent RNA helica... 1043 0.0 ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica... 1036 0.0 gb|EEE55441.1| hypothetical protein OsJ_03588 [Oryza sativa Japo... 1036 0.0 ref|XP_004243616.1| PREDICTED: probable ATP-dependent RNA helica... 1036 0.0 gb|EEC71544.1| hypothetical protein OsI_03881 [Oryza sativa Indi... 1034 0.0 ref|XP_006366627.1| PREDICTED: probable ATP-dependent RNA helica... 1033 0.0 emb|CBI22072.3| unnamed protein product [Vitis vinifera] 1032 0.0 ref|XP_001763578.1| predicted protein [Physcomitrella patens] gi... 1005 0.0 ref|XP_004147777.1| PREDICTED: probable ATP-dependent RNA helica... 999 0.0 ref|XP_004161565.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP... 996 0.0 ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinu... 991 0.0 gb|EOX93089.1| ATP-dependent RNA helicase, putative isoform 2 [T... 990 0.0 gb|EOX93088.1| ATP-dependent RNA helicase, putative isoform 1 [T... 990 0.0 ref|XP_006484996.1| PREDICTED: probable ATP-dependent RNA helica... 988 0.0 ref|XP_006437089.1| hypothetical protein CICLE_v10033885mg, part... 988 0.0 ref|XP_002307569.2| NUCLEAR DEIH-BOXHELICASE family protein [Pop... 976 0.0 >ref|XP_004970095.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Setaria italica] Length = 1197 Score = 1066 bits (2758), Expect = 0.0 Identities = 544/969 (56%), Positives = 713/969 (73%), Gaps = 12/969 (1%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 I+E RSKLPI++FKD+ITS +++H+VV+I+GETGCGKTTQVPQYILDHMW + +SC+I+C Sbjct: 175 IMEDRSKLPISSFKDAITSTLENHQVVLISGETGCGKTTQVPQYILDHMWGKGESCKIIC 234 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISA SVAER++ ERGE +G TVGY+IR+ESKGGKNSS+MFCTNGVLLR LI G+ Sbjct: 235 TQPRRISAISVAERISAERGEAVGDTVGYKIRLESKGGKNSSVMFCTNGVLLRVLIGRGT 294 Query: 2987 PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMS 2808 + + +++ ++L +HIIVDEIHERDR++DF+L ILRDLL + P+LRL+LMS Sbjct: 295 NTSKT---RNPKRSLDDAILGISHIIVDEIHERDRFSDFMLTILRDLLPVYPHLRLVLMS 351 Query: 2807 ATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNF-- 2634 ATIDAE FS+YF+ C VI+VPGFTYPV+TYYLED+L +L + Sbjct: 352 ATIDAERFSQYFNGCSVIQVPGFTYPVKTYYLEDVLSILQSVGDNHLNTTTSDKKQSSVL 411 Query: 2633 -----AAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFYE 2469 ++MD+++N+A +D FD L+E+I+ + EIYNYQHSE+GVTPLMV AAKG+ + Sbjct: 412 TDDFKSSMDDSINLALLNDEFDPLLELISAEQNPEIYNYQHSETGVTPLMVFAAKGQLGD 471 Query: 2468 VSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKKYV 2289 V +LL G + +D DGK+ALDWAQ+E Q+EV E+I K ME S +E + +LL KY+ Sbjct: 472 VCMLLSFGVDCSAQDHDGKSALDWAQQEKQQEVYEVIKKHMECSTAKSTE-DNELLNKYL 530 Query: 2288 SNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHFK 2109 + + + ++ LI LL KIC + A+L+FLPGWE+I + R++LL SP + Sbjct: 531 ATINPEHIDTVLIERLLGKICVDSNEG-------AILVFLPGWEDINQTRERLLASPFLR 583 Query: 2108 DSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMKE 1929 DSS++++L LHS+I S EQKKVF+ PP GVRKIIL+TNIAET+VTIDD+ VIDSG MKE Sbjct: 584 DSSRFLVLSLHSMIPSLEQKKVFKRPPAGVRKIILSTNIAETAVTIDDVVFVIDSGRMKE 643 Query: 1928 KSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKRA 1749 KSYDPY NVSTLH SW+SKA+ARQREGRAGRCQ G+CYHL+S+ RA++LP+YQIPEIKR Sbjct: 644 KSYDPYNNVSTLHASWVSKANARQREGRAGRCQAGICYHLYSRFRASSLPDYQIPEIKRM 703 Query: 1748 SLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQL 1569 +EELCLQ+KLL +C I+DF+KK +DPP+ +VRNAI +LQ++GA+ +E+LT+LG +L Sbjct: 704 PIEELCLQVKLLDPNCRIADFLKKTLDPPVPETVRNAITVLQDLGALTQDEQLTELGEKL 763 Query: 1568 GSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIWT 1389 GSLP+HP+T+KMLLFAILMNCLDPALT+A A+ Y+DPF+LP+ P ERK A AAK E Sbjct: 764 GSLPVHPSTTKMLLFAILMNCLDPALTLACAADYRDPFLLPMAPDERKRAAAAKVELASL 823 Query: 1388 HGGYSDQLAVVAAFNSWREAKNRG---KFCANYYISNATMFMIDGMRHQLWGELRQKGLV 1218 +GG+SDQLAVVAAF+ WR AK+RG +FC Y++S+ M+M+ MR QL EL Q+G V Sbjct: 824 YGGFSDQLAVVAAFDCWRRAKDRGQESQFCTKYFVSSNIMYMLSNMRKQLQNELSQRGFV 883 Query: 1217 PENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHSTL 1038 P + +CSLNS+D GI+RAVL+AG YPMVG +LP + RKAVV T+ G KVR+HPHS Sbjct: 884 PADTSACSLNSKDPGIMRAVLMAGAYPMVGRLLPPRKNARKAVVETASGAKVRLHPHS-- 941 Query: 1037 FKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPLXXXX 858 +FN S SS N LL +DEI R D IK+C++V + LLLLATEMVVAP Sbjct: 942 ---CNFNLSFSKSSGNPLLIYDEITRGDGGMYIKNCSVVGSHPLLLLATEMVVAPPDDDS 998 Query: 857 XXXXXXXXXXXXXXDVSKSLPEKTMSIPDNLVSIVVDRWLRFEATSLDAAQLYCLRERLS 678 + + E+ MS PDN VS+VVDRWLRF+AT+LD AQ+YCLRERL+ Sbjct: 999 DEEEDSSEDEAEKSTLVQH-KEEIMSSPDNTVSVVVDRWLRFDATALDVAQIYCLRERLA 1057 Query: 677 AAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPSDM--DRREFHSQVPTAPNT 504 +A+ FKVK+P D LP LG S+YAIAC+LSYDG + +D+ +R + + + Sbjct: 1058 SAILFKVKYPQDVLPQALGASMYAIACILSYDGLPAMVPSNDLPANRGSGQNSAEASSFS 1117 Query: 503 PGRMGGFTP 477 GR G+ P Sbjct: 1118 QGRRAGYIP 1126 >ref|XP_002456402.1| hypothetical protein SORBIDRAFT_03g035700 [Sorghum bicolor] gi|241928377|gb|EES01522.1| hypothetical protein SORBIDRAFT_03g035700 [Sorghum bicolor] Length = 1299 Score = 1063 bits (2748), Expect = 0.0 Identities = 541/973 (55%), Positives = 710/973 (72%), Gaps = 14/973 (1%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 I+E R+KLPI++FKD ITS +++H+VV+I+G+TGCGKTTQVPQYILDHMW + +SC+I+C Sbjct: 283 IMEDRTKLPISSFKDVITSTLENHQVVLISGQTGCGKTTQVPQYILDHMWGKGESCKIIC 342 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISA SVAER++ ERGE +G TVGY+IR+ESKGG+NSS++FCTNGVLLR LI G+ Sbjct: 343 TQPRRISAISVAERISAERGEAVGDTVGYKIRLESKGGQNSSVLFCTNGVLLRVLIGRGT 402 Query: 2987 PLPEGMAGKKKRKASKT---SLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLI 2817 + K R ++ ++L THIIVDEIHERDR++DF+L ILRDLL + P+LRL+ Sbjct: 403 KTSKARNPSKARNQKRSLDDAILGITHIIVDEIHERDRFSDFMLTILRDLLPVYPHLRLV 462 Query: 2816 LMSATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXN 2637 LMSATIDAE FS+YF+ C VI+VPGFTYPV+++YLED+L +L Sbjct: 463 LMSATIDAERFSQYFNGCSVIQVPGFTYPVKSFYLEDVLSILQSAGDNHLNTTSDKKESI 522 Query: 2636 F------AAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKF 2475 ++MD+++N+A +D FD L+E+I+ + E+ NYQHSE+GVTPL+V AAKG+ Sbjct: 523 VLTDDFKSSMDDSINLALVNDEFDPLLELISAEQNREVCNYQHSETGVTPLIVFAAKGQL 582 Query: 2474 YEVSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKK 2295 +V +LL G + +D DGK+ALDWAQ+ENQ+EV E+I K ME S + +E + +LL K Sbjct: 583 GDVCMLLSFGVDCSAQDHDGKSALDWAQEENQQEVYEVIKKHMECSSEKSTE-DNELLNK 641 Query: 2294 YVSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPH 2115 Y++ + + ++ LI LL KIC + A+L+FLPGWE+I + R++L SP Sbjct: 642 YLATINPEHIDTLLIERLLGKICVDSNEG-------AILVFLPGWEDINQTRERLFASPF 694 Query: 2114 FKDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFM 1935 F+DSS++++L LHS+I SSEQKKVF+ PP GVRKIIL+TNIAET+VTIDD+ VIDSG M Sbjct: 695 FRDSSRFLVLSLHSMIPSSEQKKVFKRPPAGVRKIILSTNIAETAVTIDDVVFVIDSGRM 754 Query: 1934 KEKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIK 1755 KEKSYDPY NVSTLH SW+SKASARQREGRAGRCQPG CYHL+S+ RA++LP+YQIPEIK Sbjct: 755 KEKSYDPYNNVSTLHASWVSKASARQREGRAGRCQPGTCYHLYSRFRASSLPDYQIPEIK 814 Query: 1754 RASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGR 1575 R +EELCLQ+KLL +C I+DF+KK +DPP+ +V NAI +LQ++GA+ +E+LT+LG Sbjct: 815 RMPIEELCLQVKLLDSNCRIADFLKKTLDPPIPETVGNAIAVLQDLGALTQDEQLTELGE 874 Query: 1574 QLGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFI 1395 +LGSLP+HP+T+KMLLFAILMNCLDPALT+A A+ Y+DPF+LP+ P ERK A AA+ E Sbjct: 875 KLGSLPVHPSTTKMLLFAILMNCLDPALTLACAADYRDPFVLPIAPDERKRAAAARVELA 934 Query: 1394 WTHGGYSDQLAVVAAFNSWREAKNRG---KFCANYYISNATMFMIDGMRHQLWGELRQKG 1224 +GG+SDQLAVVAAF+ WR A++RG +FCA Y++S+ M M+ MR QL EL Q+G Sbjct: 935 SLYGGFSDQLAVVAAFDCWRRARDRGQESQFCAKYFVSSNIMNMLSNMRKQLQNELSQRG 994 Query: 1223 LVPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHS 1044 VP + +CSLNS+D GI+RAVL+AG YPMVG +LP + RKAVV T+ G KVR+HPHS Sbjct: 995 FVPADASACSLNSKDPGIMRAVLMAGAYPMVGKLLPPRKNARKAVVETASGAKVRLHPHS 1054 Query: 1043 TLFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPLXX 864 +FN S S N LL +DEI R D IK+ ++V Y LLL+ATEMVVAP Sbjct: 1055 -----CNFNLSFNKSYGNPLLIYDEITRGDGGMYIKNSSVVGSYPLLLIATEMVVAPPDD 1109 Query: 863 XXXXXXXXXXXXXXXXDVSKSLPEKTMSIPDNLVSIVVDRWLRFEATSLDAAQLYCLRER 684 + + E MS PD+ VS+VVDRWLRF+AT+LD AQ+YCLRER Sbjct: 1110 DSDEEENSSEDEAEESTLVQH-KEDIMSSPDSTVSVVVDRWLRFDATALDVAQIYCLRER 1168 Query: 683 LSAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPSDMDRREFHSQ--VPTAP 510 L++A+ FKVKHP D LPP LG S YAIAC+LSYDG + P+D+ + Q + Sbjct: 1169 LASAILFKVKHPQDVLPPALGASTYAIACILSYDGLPAMVPPNDLSANQGSGQNLAEASR 1228 Query: 509 NTPGRMGGFTPRS 471 + GR G+ P S Sbjct: 1229 FSQGRRTGYIPPS 1241 >ref|NP_001044362.1| Os01g0767700 [Oryza sativa Japonica Group] gi|53792445|dbj|BAD53353.1| putative DEIH-box RNA/DNA helicase [Oryza sativa Japonica Group] gi|53793557|dbj|BAD53327.1| putative DEIH-box RNA/DNA helicase [Oryza sativa Japonica Group] gi|113533893|dbj|BAF06276.1| Os01g0767700 [Oryza sativa Japonica Group] Length = 1223 Score = 1051 bits (2718), Expect = 0.0 Identities = 537/970 (55%), Positives = 709/970 (73%), Gaps = 13/970 (1%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 IV+ RSKLPI+++KD+I+S +++H+VV+I+GETGCGKTTQVPQYILDHMW + +SC+I+C Sbjct: 199 IVQDRSKLPISSYKDAISSTLENHQVVLISGETGCGKTTQVPQYILDHMWGKGESCKIVC 258 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISA SVAER++ ERGE++G TVGY+IR+ESKGGKNSSIMFCTNGVLLR LI + Sbjct: 259 TQPRRISAISVAERISAERGESVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLLIGRVT 318 Query: 2987 PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMS 2808 + + K+ + T + THIIVDEIHERDR++DF+L ILRDLL + P+LRL+LMS Sbjct: 319 NISKEQNQKRSFDDAVTGI---THIIVDEIHERDRFSDFMLAILRDLLPLYPHLRLVLMS 375 Query: 2807 ATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNF-- 2634 ATIDAE FS YF CP I+VPGFT+PV+T+YLED+L +L + Sbjct: 376 ATIDAERFSNYFSGCPFIQVPGFTHPVKTFYLEDVLSILQSVGDNHLDPTTDDLKQSSLL 435 Query: 2633 -----AAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFYE 2469 ++MDEA+N+A +D FD L+E+I+ + EI+NYQHSE+GVTPLMV A KG+ + Sbjct: 436 TDDYKSSMDEAINLALDNDEFDPLLELISAEQNQEIFNYQHSETGVTPLMVLAGKGQVGD 495 Query: 2468 VSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQME-GSVQMQSEVEEQLLKKY 2292 + +LL G + +D DGK+AL WA++ NQ+EV E+I K ME GS ++ E E LL KY Sbjct: 496 ICMLLSFGVDCSTRDHDGKSALGWAEQGNQQEVCEVIKKHMECGSAKLTEENE--LLNKY 553 Query: 2291 VSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHF 2112 ++ + + ++ LI LL+KIC + A+L+FLPGWE+I + R++LL SP F Sbjct: 554 LATINPEHIDTVLIERLLRKICVDSNEG-------AILVFLPGWEDINQTRERLLASPFF 606 Query: 2111 KDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMK 1932 +DSSK+++L LHS+I SSEQKKVF+ PP G RKIIL+TNIAET+VTIDD+ VIDSG MK Sbjct: 607 QDSSKFLVLSLHSMIPSSEQKKVFKRPPAGSRKIILSTNIAETAVTIDDVVFVIDSGRMK 666 Query: 1931 EKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKR 1752 EKSYDPY NVSTLH SW+SKA+ARQR+GRAGRCQPG CYHL+S+ RAA+L EYQIPEIKR Sbjct: 667 EKSYDPYNNVSTLHSSWVSKANARQRQGRAGRCQPGTCYHLYSRFRAASLLEYQIPEIKR 726 Query: 1751 ASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQ 1572 +EELCLQ+KLL +C I+DF++K +DPP+ +VRNAI +LQ++GA+ +E+LT+LG + Sbjct: 727 MPIEELCLQVKLLDPNCRIADFLRKTLDPPIPETVRNAITVLQDLGALTQDEQLTELGEK 786 Query: 1571 LGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIW 1392 LGSLP+HP+TSKMLLF ILMNCLDPALT+A A+ Y+DPF+LP+ P ERK A AAK E Sbjct: 787 LGSLPVHPSTSKMLLFGILMNCLDPALTLACAADYRDPFLLPMAPDERKRAAAAKVELAS 846 Query: 1391 THGGYSDQLAVVAAFNSWREAKNRG---KFCANYYISNATMFMIDGMRHQLWGELRQKGL 1221 +GGYSDQLAVVAA + WR AK+RG +FC+ Y++S+ TM M+ MR QL EL Q+G Sbjct: 847 LYGGYSDQLAVVAAMDCWRRAKDRGQEAQFCSKYFVSSNTMNMLSNMRKQLQNELAQRGF 906 Query: 1220 VPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHST 1041 VP + +CSLN++D GI+RAVL+AG YPMVG +LP + R+AV+ T+ G KVR+HPHS Sbjct: 907 VPVDASACSLNARDPGIIRAVLMAGAYPMVGRLLPPRKNTRRAVIETASGAKVRLHPHS- 965 Query: 1040 LFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPLXXX 861 +FN S + +S N L+ +DEI R D IK+ ++V Y L++LATEMVVAP Sbjct: 966 ----CNFNLSFRKTSGNPLVIYDEITRGDGGMYIKNSSVVGSYPLIILATEMVVAPPEDD 1021 Query: 860 XXXXXXXXXXXXXXXDVSKSLPEKTMSIPDNLVSIVVDRWLRFEATSLDAAQLYCLRERL 681 V+ ++ MS PDN VS+V+DRWLRF+AT+LD AQ+YCLRERL Sbjct: 1022 DSDEEDGDSSEDETEKVTLGQHKEIMSSPDNSVSVVIDRWLRFDATALDVAQIYCLRERL 1081 Query: 680 SAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPSDM--DRREFHSQVPTAPN 507 ++A+ FKVKHP D LPP LG ++YAIAC+LSYDG + D+ + S ++ Sbjct: 1082 ASAILFKVKHPQDVLPPDLGATMYAIACILSYDGLPAMITSDDVATSQGSNQSSAESSRF 1141 Query: 506 TPGRMGGFTP 477 + GR G+ P Sbjct: 1142 SQGRRVGYIP 1151 >ref|XP_006646361.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Oryza brachyantha] Length = 1181 Score = 1044 bits (2700), Expect = 0.0 Identities = 532/967 (55%), Positives = 701/967 (72%), Gaps = 10/967 (1%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 IV+ RSKLPI+++KD I+S +++++VV+I+GETGCGKTTQVPQYILDHMW + +SC+++C Sbjct: 170 IVQDRSKLPISSYKDVISSTLENNQVVLISGETGCGKTTQVPQYILDHMWGKGESCKVVC 229 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISA SVAER++ ERGE +G TVGY+IR+ESKGGKNSSI+FCTNG+LLR LI + Sbjct: 230 TQPRRISAISVAERISAERGEAVGDTVGYKIRLESKGGKNSSILFCTNGILLRVLIGRVT 289 Query: 2987 PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMS 2808 + + + K+ + T L THIIVDEIHERDR++DF+L ILRDLL + P+LRL+LMS Sbjct: 290 NISKEQSRKRSFGDAITEL---THIIVDEIHERDRFSDFMLAILRDLLPLYPHLRLVLMS 346 Query: 2807 ATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNF-- 2634 ATIDAE FSKYF CPVI+VPGFTYPV+T+YLED+L +L + Sbjct: 347 ATIDAERFSKYFSGCPVIQVPGFTYPVKTFYLEDVLSILQSVGDNHLNTTTDDLKQSSLL 406 Query: 2633 -----AAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFYE 2469 ++MDEA+N+A D FD L+E+I+ + EI+NYQHSE+GVTPLMV A KG+ + Sbjct: 407 TDDYKSSMDEAINLALGSDEFDPLLELISTEQNQEIFNYQHSETGVTPLMVLAGKGQVGD 466 Query: 2468 VSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKKYV 2289 V +LL G + +D DGK+ALDWA++ NQ+EV E+I K +E S +E E +LL KY+ Sbjct: 467 VCMLLSFGVDCSAQDHDGKSALDWAEQGNQQEVCEVIKKHVECSSAKLTE-ENELLNKYL 525 Query: 2288 SNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHFK 2109 + + + ++ LI LL+KIC + A+L+FLPGWE+I + R++LL S F+ Sbjct: 526 ATINPEHIDTVLIERLLRKICVDSNEG-------AILVFLPGWEDINQTRERLLASSFFR 578 Query: 2108 DSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMKE 1929 DSSK+++L LHS+I S EQKKVF+ PP G RKIIL+TNIAET+VTIDD+ VIDSG MKE Sbjct: 579 DSSKFLVLSLHSMIPSLEQKKVFKRPPAGARKIILSTNIAETAVTIDDVVFVIDSGRMKE 638 Query: 1928 KSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKRA 1749 KSYDPY NVSTLH SW+SKA+ARQR+GRAGRCQPG CYHL+S+ RAA+LP+YQIPEIKR Sbjct: 639 KSYDPYNNVSTLHSSWVSKANARQRQGRAGRCQPGTCYHLYSRFRAASLPDYQIPEIKRM 698 Query: 1748 SLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQL 1569 +EELCLQ+KLL DC I+DF+KK +D P+ +VRNAI +LQ++GA+ +E+LT+LG +L Sbjct: 699 PIEELCLQVKLLDSDCRIADFLKKTLDSPVPETVRNAISVLQDLGALTQDEQLTELGEKL 758 Query: 1568 GSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIWT 1389 G+LP+HP+TSKMLLF ILMNCLDPALT+A A+ Y+DPF+LP+ P ERK A AAK E Sbjct: 759 GTLPVHPSTSKMLLFGILMNCLDPALTLACAADYRDPFLLPMAPDERKKAAAAKVELASL 818 Query: 1388 HGGYSDQLAVVAAFNSWREAKNRG---KFCANYYISNATMFMIDGMRHQLWGELRQKGLV 1218 +GGYSDQLAVVAA + WR AK+RG +FC+ Y++S+ TM M+ M QL EL Q+G V Sbjct: 819 YGGYSDQLAVVAALDCWRRAKDRGEESQFCSKYFVSSNTMHMLSNMTKQLQNELAQRGFV 878 Query: 1217 PENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHSTL 1038 P + +CSLN++D GI+RAVL+AG YPMVG +LP + R+AV+ T+ G KVR+HPHS Sbjct: 879 PADASACSLNARDPGIIRAVLMAGAYPMVGRLLPPNRNIRRAVIETASGAKVRLHPHS-- 936 Query: 1037 FKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPLXXXX 858 +FN S + +S N L+ +DEI R D IK+ ++V Y L++LATEMVVAP Sbjct: 937 ---CNFNLSSRKTSGNPLVTYDEITRGDGGMYIKNSSVVGTYPLIILATEMVVAP----- 988 Query: 857 XXXXXXXXXXXXXXDVSKSLPEKTMSIPDNLVSIVVDRWLRFEATSLDAAQLYCLRERLS 678 + ++ MS PDN VS+V+DRWLRF+AT+LD AQ+YCLRERL+ Sbjct: 989 -PDDDDSDDEDDTDKGTLGQQKEIMSSPDNSVSVVIDRWLRFDATALDVAQIYCLRERLA 1047 Query: 677 AAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPSDMDRREFHSQVPTAPNTPG 498 +A+ FKVKHP D LPP LG ++YAIAC+LSYDG + D S ++ G Sbjct: 1048 SAILFKVKHPQDVLPPDLGATMYAIACILSYDGLPAMVTTDDAGTSRGSSSTESSRFAQG 1107 Query: 497 RMGGFTP 477 R + P Sbjct: 1108 RRVAYIP 1114 >ref|XP_003567152.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Brachypodium distachyon] Length = 1272 Score = 1043 bits (2697), Expect = 0.0 Identities = 545/1004 (54%), Positives = 718/1004 (71%), Gaps = 27/1004 (2%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 IVE RSKLPI++FKD I+S +++++VV+I+GETGCGKTTQVPQYILDH+W + +SC+I+C Sbjct: 249 IVEDRSKLPISSFKDHISSTLENNQVVLISGETGCGKTTQVPQYILDHVWGKGESCKIIC 308 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISA SVAER++ ERGE +G TVGY+IR+ESKGGKNSSIMFCTNGVLLR LI + Sbjct: 309 TQPRRISAISVAERISAERGEVVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLLIGRVT 368 Query: 2987 PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMS 2808 +P+ K +++ +++ THIIVDEIHERDR++DF+L ILRDLL + P+L L+LMS Sbjct: 369 NMPKA---KNPKRSFDDAVMGITHIIVDEIHERDRFSDFMLAILRDLLPVYPHLHLVLMS 425 Query: 2807 ATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNF-- 2634 ATIDAE FS+YF+ CP+I+VPG TYPV+ +YLED+L +L + Sbjct: 426 ATIDAERFSQYFNGCPIIQVPGHTYPVKIFYLEDVLSILQSVGDNHLNPATDDLEQDSIL 485 Query: 2633 -----AAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFYE 2469 ++MDE++++A ++D FD L+E+I+ EI+NY+HSESGVTPLMV A KG+ + Sbjct: 486 TDDYRSSMDESISMALANDEFDPLIELISVEQSPEIFNYRHSESGVTPLMVFAGKGQIGD 545 Query: 2468 VSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQME-GSVQMQSEVEEQLLKKY 2292 V +LL G + +D DGK+ALDWAQ+ENQ++V E+I K M+ GSV+ S E +LL +Y Sbjct: 546 VCMLLSFGVDCSARDHDGKSALDWAQQENQQQVYEVIKKHMDCGSVK--SPQENELLNRY 603 Query: 2291 VSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHF 2112 ++ + + ++ LI LL+KIC + AVL+FLPGWE+I + R++L SP F Sbjct: 604 LTTINPEHIDTVLIERLLRKICIDSNEG-------AVLVFLPGWEDINQTRERLFASPLF 656 Query: 2111 KDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMK 1932 +DSSK++IL LHS+I S EQKKVF+ PP GVRKIIL+TNIAET+VTIDD+ VIDSG MK Sbjct: 657 QDSSKFLILSLHSMIPSVEQKKVFKSPPVGVRKIILSTNIAETAVTIDDVVFVIDSGKMK 716 Query: 1931 EKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKR 1752 EKSYDPY NVSTLH SW+S+ASARQREGRAGRCQPG CYHL+S RAA+LPEYQIPEIKR Sbjct: 717 EKSYDPYNNVSTLHTSWVSRASARQREGRAGRCQPGTCYHLYSGFRAASLPEYQIPEIKR 776 Query: 1751 ASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQ 1572 +EELCLQ+KLL +C I+DF+KK +DPP+ +V+NAI +LQ++GA+ +E+LTDLG + Sbjct: 777 MPIEELCLQVKLLDPNCRIADFLKKTLDPPIPETVKNAITVLQDLGALTQDEQLTDLGEK 836 Query: 1571 LGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIW 1392 LGSLP+HP+TSKMLLF ILMNCLDPALT+A A+ Y+DPF+LP+ P ERK A AAK E Sbjct: 837 LGSLPVHPSTSKMLLFGILMNCLDPALTLACAADYRDPFVLPMAPDERKKAAAAKVELAS 896 Query: 1391 THGGYSDQLAVVAAFNSWREAKNRGK---FCANYYISNATMFMIDGMRHQLWGELRQKGL 1221 +GG+SDQLAVVAAF+ W AK+RG+ FC+ Y+++ TM M+ MR QL EL Q+G Sbjct: 897 LYGGFSDQLAVVAAFDCWICAKDRGQEALFCSKYFVAANTMNMLSNMRKQLHSELSQRGF 956 Query: 1220 VPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHST 1041 +P + +CSLN++ GI+ AVL+AG YPMVG +LP + ++AVV T+ G KVR+HPHS Sbjct: 957 LPADASACSLNAKVPGIISAVLVAGAYPMVGRLLPPRRNCKRAVVETASGAKVRLHPHS- 1015 Query: 1040 LFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPLXXX 861 +FN S S N L+ +DEI R D IK+C++V Y L+LLATEM VAP Sbjct: 1016 ----CNFNLSFNKSYGNPLMIYDEITRGDGGMYIKNCSVVGSYPLVLLATEMAVAP--PD 1069 Query: 860 XXXXXXXXXXXXXXXDVSKSLPEKTMSIPDNLVSIVVDRWLRFEATSLDAAQLYCLRERL 681 + S E+ MS+PDN VS+++DRWLRF+AT+LD AQ+YCLRERL Sbjct: 1070 DSDEEEGSSEDEAEKNTSGQQNEEIMSLPDNTVSVIIDRWLRFDATALDIAQIYCLRERL 1129 Query: 680 SAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPSDMDRREFHSQVPTAPN-- 507 ++A+ FKVKHP D LPP LG ++YA+AC+LSYDG + +D+ +Q T + Sbjct: 1130 ASAILFKVKHPQDVLPPALGATMYAVACILSYDGLPGMVESADLSTNRGSNQSSTEASRF 1189 Query: 506 TPGRM------GGF--------TPRSKQIADSSFSSNTAKGPIR 417 T GR GGF P + Q SS A G IR Sbjct: 1190 TQGRRASYIPPGGFLMSLLSDIPPNAPQFRKSSHHPGGASGHIR 1233 >ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis vinifera] Length = 1231 Score = 1036 bits (2680), Expect = 0.0 Identities = 519/949 (54%), Positives = 694/949 (73%), Gaps = 26/949 (2%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 I E RSKLPIA+FKD ITS I+SH+VV+I+GETGCGKTTQVPQ++LD+MW + ++C+I+C Sbjct: 175 ITEGRSKLPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGKGEACKIVC 234 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISATSVAER++ E+GEN+G +VGY+IR+ESKGG++SSI+FCTNG+LLR L++ G+ Sbjct: 235 TQPRRISATSVAERISFEKGENVGDSVGYKIRLESKGGRHSSIIFCTNGILLRVLVSKGT 294 Query: 2987 PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMS 2808 + + + RKA+K + D THIIVDEIHERDRY+DF+L ILRD+L P+LRLILMS Sbjct: 295 ---DRLKPEALRKAAKRDISDITHIIVDEIHERDRYSDFMLAILRDMLASYPHLRLILMS 351 Query: 2807 ATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNF-- 2634 ATIDAE FS+YF CP+IRVPGFTYPV+T+YLED+L +L Sbjct: 352 ATIDAERFSQYFGGCPIIRVPGFTYPVKTFYLEDVLSILKSTGNNNLDSTLLSLPVEDPK 411 Query: 2633 ------AAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFY 2472 A+DEA+N+A+S+D FD L++ ++ +++NYQHS +G+TPLMV A KG+ Sbjct: 412 LIEDYGVALDEAINLAWSNDEFDPLLDFVSSEGTPQVFNYQHSSTGLTPLMVFAGKGRVA 471 Query: 2471 EVSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKKY 2292 +V ++L GA+ LK D TALD A++EN E AE+I + ME + E E+QLL KY Sbjct: 472 DVCMMLSFGADCHLKANDDTTALDLAERENHREAAEMIKQHMENLLSNSVE-EQQLLDKY 530 Query: 2291 VSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHF 2112 ++ + + ++V L+ LL+KIC + A+L+FLPGW++I R R++LL + F Sbjct: 531 LATNNPEIIDVALVEQLLRKICNDSKDG-------AILVFLPGWDDINRTREKLLSASFF 583 Query: 2111 KDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMK 1932 KDSSK++++ LHS++ S EQKKVF+ PPPG RKI+L+TNI+ET++TIDD+ VIDSG MK Sbjct: 584 KDSSKFVVISLHSMVPSVEQKKVFKRPPPGCRKIVLSTNISETAITIDDVVYVIDSGRMK 643 Query: 1931 EKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKR 1752 EKSYDPY NVSTL +WISKASA+QREGRAGRC+PGVCYHL+SK+RAA+LP++Q+PEIKR Sbjct: 644 EKSYDPYNNVSTLQSAWISKASAKQREGRAGRCRPGVCYHLYSKLRAASLPDFQVPEIKR 703 Query: 1751 ASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQ 1572 +EELCLQ+KLL +C I DF++K +DPP+ ++RNA+I+LQ+IGA++ +EKLT+LG++ Sbjct: 704 MPIEELCLQVKLLDPNCKIEDFLRKTLDPPVFETIRNAVIVLQDIGALSVDEKLTELGKK 763 Query: 1571 LGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIW 1392 LGSLP+HP TSKML FAIL+NCLDPALT+A AS Y+DPF LP++P E+K A AAK E Sbjct: 764 LGSLPVHPLTSKMLFFAILLNCLDPALTLACASDYRDPFTLPMLPHEKKRATAAKAELAS 823 Query: 1391 THGGYSDQLAVVAAFNSWREAKNRG---KFCANYYISNATMFMIDGMRHQLWGELRQKGL 1221 +GG+SDQLAV+AAF W+ AK +G +FC+ Y++S+ TM M+ GMR QL EL + G Sbjct: 824 LYGGHSDQLAVIAAFECWKSAKEKGQEAQFCSQYFVSSGTMHMLAGMRKQLQTELIRNGF 883 Query: 1220 VPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHST 1041 +PE++ SCSLN++D GI+ AVL+AG YPMVG +LP SG+++VV T+ G KVR+HPHS Sbjct: 884 IPEDVSSCSLNARDPGIIHAVLVAGLYPMVGRLLPPHKSGKRSVVETASGAKVRLHPHSN 943 Query: 1040 LFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAP---- 873 FKL S K S L+ +DEI R D I++CT++ P LLLLATE+VVAP Sbjct: 944 NFKL-----SFKKSDGRPLIIYDEITRGDGGMHIRNCTVIGPLPLLLLATEIVVAPGKGN 998 Query: 872 -----------LXXXXXXXXXXXXXXXXXXDVSKSLPEKTMSIPDNLVSIVVDRWLRFEA 726 ++ EK MS PDN V++VVDRW FE+ Sbjct: 999 DDDDEDCDDDSDGDDIDEDDSEGDGKEANNKLNGQQGEKIMSSPDNTVAVVVDRWHSFES 1058 Query: 725 TSLDAAQLYCLRERLSAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDG 579 T+LD AQ+YCLRERL+AA+ FK H + LPP+LG SVYAIAC+LSYDG Sbjct: 1059 TALDVAQIYCLRERLTAAIFFKATHAREVLPPMLGASVYAIACILSYDG 1107 >gb|EEE55441.1| hypothetical protein OsJ_03588 [Oryza sativa Japonica Group] Length = 1286 Score = 1036 bits (2679), Expect = 0.0 Identities = 534/970 (55%), Positives = 705/970 (72%), Gaps = 13/970 (1%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 IV+ RSKLPI+++KD+I+S +++H+VV+I+GETGCGKTTQVPQYILDHMW + +SC+I+C Sbjct: 268 IVQDRSKLPISSYKDAISSTLENHQVVLISGETGCGKTTQVPQYILDHMWGKGESCKIVC 327 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISA SVAER++ ERGE++G TVGY+IR+ESKGGKNSSIMFCTNGVLLR LI G Sbjct: 328 TQPRRISAISVAERISAERGESVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLLI--GR 385 Query: 2987 PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMS 2808 + E + + + A H+ DEIHERDR++DF+L ILRDLL + P+LRL+LMS Sbjct: 386 RIAENIYQLFLCNSER-----AEHL--DEIHERDRFSDFMLAILRDLLPLYPHLRLVLMS 438 Query: 2807 ATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNF-- 2634 ATIDAE FS YF CP I+VPGFT+PV+T+YLED+L +L + Sbjct: 439 ATIDAERFSNYFSGCPFIQVPGFTHPVKTFYLEDVLSILQSVGDNHLDPTTDDLKQSSLL 498 Query: 2633 -----AAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFYE 2469 ++MDEA+N+A +D FD L+E+I+ + EI+NYQHSE+GVTPLMV A KG+ + Sbjct: 499 TDDYKSSMDEAINLALDNDEFDPLLELISAEQNQEIFNYQHSETGVTPLMVLAGKGQVGD 558 Query: 2468 VSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQME-GSVQMQSEVEEQLLKKY 2292 + +LL G + +D DGK+AL WA++ NQ+EV E+I K ME GS ++ E E LL KY Sbjct: 559 ICMLLSFGVDCSTRDHDGKSALGWAEQGNQQEVCEVIKKHMECGSAKLTEENE--LLNKY 616 Query: 2291 VSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHF 2112 ++ + + ++ LI LL+KIC + A+L+FLPGWE+I + R++LL SP F Sbjct: 617 LATINPEHIDTVLIERLLRKICVDSNEG-------AILVFLPGWEDINQTRERLLASPFF 669 Query: 2111 KDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMK 1932 +DSSK+++L LHS+I SSEQKKVF+ PP G RKIIL+TNIAET+VTIDD+ VIDSG MK Sbjct: 670 QDSSKFLVLSLHSMIPSSEQKKVFKRPPAGSRKIILSTNIAETAVTIDDVVFVIDSGRMK 729 Query: 1931 EKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKR 1752 EKSYDPY NVSTLH SW+SKA+ARQR+GRAGRCQPG CYHL+S+ RAA+L EYQIPEIKR Sbjct: 730 EKSYDPYNNVSTLHSSWVSKANARQRQGRAGRCQPGTCYHLYSRFRAASLLEYQIPEIKR 789 Query: 1751 ASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQ 1572 +EELCLQ+KLL +C I+DF++K +DPP+ +VRNAI +LQ++GA+ +E+LT+LG + Sbjct: 790 MPIEELCLQVKLLDPNCRIADFLRKTLDPPIPETVRNAITVLQDLGALTQDEQLTELGEK 849 Query: 1571 LGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIW 1392 LGSLP+HP+TSKMLLF ILMNCLDPALT+A A+ Y+DPF+LP+ P ERK A AAK E Sbjct: 850 LGSLPVHPSTSKMLLFGILMNCLDPALTLACAADYRDPFLLPMAPDERKRAAAAKVELAS 909 Query: 1391 THGGYSDQLAVVAAFNSWREAKNRG---KFCANYYISNATMFMIDGMRHQLWGELRQKGL 1221 +GGYSDQLAVVAA + WR AK+RG +FC+ Y++S+ TM M+ MR QL EL Q+G Sbjct: 910 LYGGYSDQLAVVAAMDCWRRAKDRGQEAQFCSKYFVSSNTMNMLSNMRKQLQNELAQRGF 969 Query: 1220 VPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHST 1041 VP + +CSLN++D GI+RAVL+AG YPMVG +LP + R+AV+ T+ G KVR+HPHS Sbjct: 970 VPVDASACSLNARDPGIIRAVLMAGAYPMVGRLLPPRKNTRRAVIETASGAKVRLHPHS- 1028 Query: 1040 LFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPLXXX 861 +FN S + +S N L+ +DEI R D IK+ ++V Y L++LATEMVVAP Sbjct: 1029 ----CNFNLSFRKTSGNPLVIYDEITRGDGGMYIKNSSVVGSYPLIILATEMVVAPPEDD 1084 Query: 860 XXXXXXXXXXXXXXXDVSKSLPEKTMSIPDNLVSIVVDRWLRFEATSLDAAQLYCLRERL 681 V+ ++ MS PDN VS+V+DRWLRF+AT+LD AQ+YCLRERL Sbjct: 1085 DSDEEDGDSSEDETEKVTLGQHKEIMSSPDNSVSVVIDRWLRFDATALDVAQIYCLRERL 1144 Query: 680 SAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPSDM--DRREFHSQVPTAPN 507 ++A+ FKVKHP D LPP LG ++YAIAC+LSYDG + D+ + S ++ Sbjct: 1145 ASAILFKVKHPQDVLPPDLGATMYAIACILSYDGLPAMITSDDVATSQGSNQSSAESSRF 1204 Query: 506 TPGRMGGFTP 477 + GR G+ P Sbjct: 1205 SQGRRVGYIP 1214 >ref|XP_004243616.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Solanum lycopersicum] Length = 1199 Score = 1036 bits (2678), Expect = 0.0 Identities = 528/956 (55%), Positives = 689/956 (72%), Gaps = 24/956 (2%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 I +RSKLPIA+FKD+ITS I+S++VV+I+GETGCGKTTQVPQ+ILDHMW + ++C+I+C Sbjct: 187 ITLQRSKLPIASFKDAITSTIESNQVVLISGETGCGKTTQVPQFILDHMWGKGETCKIVC 246 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISA SV+ER++ ERGE++G TVGY+IRMES+GGK SSIMFCTNG+LLR LI +GS Sbjct: 247 TQPRRISAISVSERISAERGESVGDTVGYKIRMESRGGKQSSIMFCTNGILLRVLITNGS 306 Query: 2987 PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMS 2808 + K K + D THIIVDEIHERDRY+DF+L ILRDLL PNLRL+LMS Sbjct: 307 A---SFNKEAPGKMGKDPISDLTHIIVDEIHERDRYSDFMLAILRDLLPSYPNLRLVLMS 363 Query: 2807 ATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKL--------LXXXXXXXXXXXXX 2652 AT+DAE FSKYF CPVIRVPGFTYPV+T+YLED+L + L Sbjct: 364 ATLDAERFSKYFGGCPVIRVPGFTYPVKTFYLEDVLSIVKSTKNNHLDSTSSTVMPEESI 423 Query: 2651 XXXXNFAAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFY 2472 A+DEA+N+AFSDD+ D L+++I+ +I+NYQHS SGVTPLMV A KG+ Sbjct: 424 LTEEYKVALDEAINLAFSDDDLDPLLDLISSEGGPKIFNYQHSLSGVTPLMVLAGKGRVG 483 Query: 2471 EVSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKKY 2292 ++ +LL GA+ L+ DGKTALDWA++ENQ +V E+I + ME S E ++ LL KY Sbjct: 484 DICMLLSFGADCHLRANDGKTALDWAEQENQTQVVEIIKEHMEKS-SSSCEEQQHLLDKY 542 Query: 2291 VSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHF 2112 +S D + ++ LI LLKKIC + A+L+FLPGWE+I R R++L S +F Sbjct: 543 LSTVDPELIDDVLIEQLLKKICIDSEDG-------AILVFLPGWEDINRTRERLRASHYF 595 Query: 2111 KDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMK 1932 D SK+ ++PLHS++ S EQKKVFRHPPPG RKI+L+TNIAET++TIDD+ VIDSG MK Sbjct: 596 NDQSKFSVIPLHSMVPSVEQKKVFRHPPPGCRKIVLSTNIAETAITIDDVVYVIDSGRMK 655 Query: 1931 EKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKR 1752 EKSYDPY NVSTL SW+SKASA+QREGRAGRCQPG+CYHL+SK+RAA+LP++Q+PEIKR Sbjct: 656 EKSYDPYNNVSTLQSSWVSKASAKQREGRAGRCQPGICYHLYSKLRAASLPDFQVPEIKR 715 Query: 1751 ASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQ 1572 +EELCLQ+KLL+ DC I +F++K +DPP+ ++RNAII+LQ+IGA++ +EKLT+LG + Sbjct: 716 IPIEELCLQVKLLNPDCKIEEFLQKTLDPPVYETIRNAIIVLQDIGALSFDEKLTELGER 775 Query: 1571 LGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIW 1392 LGSLP+HP TSKMLL +IL+NCLDPALT+A AS Y+DPF LP++P E+K A AAK E Sbjct: 776 LGSLPVHPLTSKMLLISILLNCLDPALTMACASDYRDPFTLPMLPNEKKKAAAAKAELAS 835 Query: 1391 THGGYSDQLAVVAAFNSWREAKNRG---KFCANYYISNATMFMIDGMRHQLWGELRQKGL 1221 +GG SDQLAVVAAF W+ AK G +FC+ Y++S+ TM M+ GMR QL EL + G Sbjct: 836 WYGGRSDQLAVVAAFEGWKSAKETGQESRFCSKYFLSSGTMHMLSGMRKQLASELLRNGF 895 Query: 1220 VPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHST 1041 +P + SC+LN+QD GIL AVL+AG YPMVG +LP L + +K+V+ T+ G+KVR+ PHST Sbjct: 896 IPGDGSSCNLNAQDPGILHAVLVAGLYPMVGRLLPPLKNNKKSVIETAGGDKVRLSPHST 955 Query: 1040 LFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAP---- 873 FKL +P L+A+DEI R D I++C+++ P LLLLATE+VVAP Sbjct: 956 NFKLSFQKFYDQP-----LIAYDEITRGDGGLLIRNCSVIGPLPLLLLATEIVVAPGNED 1010 Query: 872 ----LXXXXXXXXXXXXXXXXXXDVSKSLP-----EKTMSIPDNLVSIVVDRWLRFEATS 720 ++ L EK MS PDN V ++VDRW+ FE+T+ Sbjct: 1011 DDDDNDDDESDYEDADEDNGEEGNIKADLSEAHQGEKIMSSPDNTVKVIVDRWIPFESTA 1070 Query: 719 LDAAQLYCLRERLSAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPSD 552 LD AQ+YCLRERL+AA+ FKV HP LP +L S+ A+ C+LSY+G + +P + Sbjct: 1071 LDVAQIYCLRERLAAAILFKVTHPGKVLPEVLAASINAMGCILSYNGMSGISLPHE 1126 >gb|EEC71544.1| hypothetical protein OsI_03881 [Oryza sativa Indica Group] Length = 1277 Score = 1034 bits (2674), Expect = 0.0 Identities = 531/970 (54%), Positives = 697/970 (71%), Gaps = 13/970 (1%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 IV+ RSKLPI+++KD+I+S +++H+VV+I+GETGCGKTTQVPQYILDHMW + +SC+I+C Sbjct: 279 IVQDRSKLPISSYKDAISSTLENHQVVLISGETGCGKTTQVPQYILDHMWGKGESCKIVC 338 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISA SVAER++ ERGE++G TVGY+IR+ESKGGKNSSIMFCTNGVLLR LI Sbjct: 339 TQPRRISAISVAERISAERGESVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLLIGR-- 396 Query: 2987 PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMS 2808 DEIHERDR++DF+L ILRDLL + P+LRL+LMS Sbjct: 397 ---------------------------DEIHERDRFSDFMLAILRDLLPLYPHLRLVLMS 429 Query: 2807 ATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNF-- 2634 ATIDAE FS YF CP I+VPGFT+PV+T+YLED+L +L + Sbjct: 430 ATIDAERFSNYFSGCPFIQVPGFTHPVKTFYLEDVLSILQSVGDNHLDPTTDDLKQSSLL 489 Query: 2633 -----AAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFYE 2469 ++MDEA+N+A +D FD L+E+I+ + EI+NYQHSE+GVTPLMV A KG+ + Sbjct: 490 TDDYKSSMDEAINLALDNDEFDPLLELISAEQNQEIFNYQHSETGVTPLMVLAGKGQVGD 549 Query: 2468 VSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQME-GSVQMQSEVEEQLLKKY 2292 + +LL G + +D DGK+ALDWA++ NQ+EV E+I K ME GS ++ E E LL KY Sbjct: 550 ICMLLSFGVDCSTRDHDGKSALDWAEQGNQQEVCEVIKKHMECGSAKLTEENE--LLNKY 607 Query: 2291 VSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHF 2112 ++ + + ++ LI LL+KIC + A+L+FLPGWE+I + R++LL SP F Sbjct: 608 LATINPEHIDTVLIERLLRKICVDSNEG-------AILVFLPGWEDINQTRERLLASPFF 660 Query: 2111 KDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMK 1932 +DSSK+++L LHS+I SSEQKKVF+ PP G RKIIL+TNIAET+VTIDD+ VIDSG MK Sbjct: 661 QDSSKFLVLSLHSMIPSSEQKKVFKRPPAGSRKIILSTNIAETAVTIDDVVFVIDSGRMK 720 Query: 1931 EKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKR 1752 EKSYDPY NVSTLH SW+SKA+ARQR+GRAGRCQPG CYHL+S+ RAA+L EYQIPEIKR Sbjct: 721 EKSYDPYNNVSTLHSSWVSKANARQRQGRAGRCQPGTCYHLYSRFRAASLLEYQIPEIKR 780 Query: 1751 ASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQ 1572 +EELCLQ+KLL +C I+DF++K +DPP+ +VRNAI +LQ++GA+ +E+LT+LG + Sbjct: 781 MPIEELCLQVKLLDPNCRIADFLRKTLDPPVPETVRNAITVLQDLGALTQDEQLTELGEK 840 Query: 1571 LGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIW 1392 LGSLP+HP+TSKMLLF ILMNCLDPALT+A A+ Y+DPF+LP+ P ERK A AAK E Sbjct: 841 LGSLPVHPSTSKMLLFGILMNCLDPALTLACAADYRDPFLLPMAPDERKRAAAAKVELAS 900 Query: 1391 THGGYSDQLAVVAAFNSWREAKNRG---KFCANYYISNATMFMIDGMRHQLWGELRQKGL 1221 +GGYSDQLAVVAA + WR AK+RG +FC+ Y++S+ TM M+ MR QL EL Q+G Sbjct: 901 LYGGYSDQLAVVAAMDCWRRAKDRGQEAQFCSKYFVSSNTMNMLSNMRKQLQNELAQRGF 960 Query: 1220 VPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHST 1041 VP + +CSLN++D GI+RAVL+AG YPMVG +LP + R+AV+ T+ G KVR+HPHS Sbjct: 961 VPVDASACSLNARDPGIIRAVLMAGAYPMVGRLLPPRKNTRRAVIETASGAKVRLHPHS- 1019 Query: 1040 LFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPLXXX 861 +FN S + +S N L+ +DEI R D IK+ ++V Y L++LATEMVVAP Sbjct: 1020 ----CNFNLSFRKTSGNPLVIYDEITRGDGGMYIKNSSVVGSYPLIILATEMVVAPPEDD 1075 Query: 860 XXXXXXXXXXXXXXXDVSKSLPEKTMSIPDNLVSIVVDRWLRFEATSLDAAQLYCLRERL 681 V+ ++ MS PDN VS+V+DRWLRF+AT+LD AQ+YCLRERL Sbjct: 1076 DSDEEDGDSSEDETEKVTLGQHKEIMSSPDNSVSVVIDRWLRFDATALDVAQIYCLRERL 1135 Query: 680 SAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPSDM--DRREFHSQVPTAPN 507 ++A+ FKVKHP D LPP LG ++YAIAC+LSYDG + D+ + S ++ Sbjct: 1136 ASAILFKVKHPQDVLPPDLGATMYAIACILSYDGLPAMITSDDVATSQGSNQSSAESSRF 1195 Query: 506 TPGRMGGFTP 477 + GR G+ P Sbjct: 1196 SQGRRVGYIP 1205 >ref|XP_006366627.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Solanum tuberosum] Length = 1205 Score = 1033 bits (2671), Expect = 0.0 Identities = 527/947 (55%), Positives = 684/947 (72%), Gaps = 24/947 (2%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 I +RSKLPIA+FKD+ITS I+S++VV+I+GETGCGKTTQVPQ+ILDHMW + ++C+I+C Sbjct: 185 ITLQRSKLPIASFKDAITSTIESNQVVLISGETGCGKTTQVPQFILDHMWGKGETCKIVC 244 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISATSV+ER++ ERGE+IG TVGY+IR+ES+GGK SSIMFCTNG+LLR LI +GS Sbjct: 245 TQPRRISATSVSERISAERGESIGDTVGYKIRLESRGGKQSSIMFCTNGILLRVLITNGS 304 Query: 2987 PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMS 2808 + K K + D THIIVDEIHERDRY+DF+L ILRDLL PNL L+LMS Sbjct: 305 A---SFNKEAPGKMGKDPISDITHIIVDEIHERDRYSDFMLAILRDLLPSYPNLHLVLMS 361 Query: 2807 ATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKL--------LXXXXXXXXXXXXX 2652 AT+DAE FSKYF CPVIRVPGFTYPV+T+YLED+L + L Sbjct: 362 ATLDAERFSKYFGGCPVIRVPGFTYPVKTFYLEDVLSIVKSTKNNHLDSTSSSVMPEESI 421 Query: 2651 XXXXNFAAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFY 2472 A+DEA+N+AFSDD+ D L+++I+ +++NYQHS SGVTPLMV A KG+ Sbjct: 422 LTEEYKVALDEAINLAFSDDDLDPLLDLISSEGGPKVFNYQHSLSGVTPLMVFAGKGRVG 481 Query: 2471 EVSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKKY 2292 ++ +LL GA++ L+ DGKTALDWA++ENQ E E+I + ME S E ++ LL KY Sbjct: 482 DICMLLSFGADYHLRANDGKTALDWAEQENQTEAVEIIKEHMEKS-SSSCEEQQHLLDKY 540 Query: 2291 VSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHF 2112 +S D ++ LI LLKKIC + A+L+FLPGWE+I R R++L S +F Sbjct: 541 LSTVDPALIDDVLIEQLLKKICIDSEDG-------AILVFLPGWEDINRTRERLRASHYF 593 Query: 2111 KDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMK 1932 D SK+ ++PLHS++ S EQKKVFRHPPPG RKI+L+TNIAET++TIDD+ VIDSG MK Sbjct: 594 NDQSKFSVIPLHSMVPSVEQKKVFRHPPPGCRKIVLSTNIAETAITIDDVVYVIDSGRMK 653 Query: 1931 EKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKR 1752 EKSYDPY NVSTL SW+SKASA+QREGRAGRCQPG+CYHL+SK+RAA+LP++QIPEIKR Sbjct: 654 EKSYDPYNNVSTLQSSWVSKASAKQREGRAGRCQPGICYHLYSKLRAASLPDFQIPEIKR 713 Query: 1751 ASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQ 1572 +EELCLQ+KLL+ DC I +F++K +DPP+ ++RNAII+LQ+IGA++ +EKLT+LG + Sbjct: 714 IPIEELCLQVKLLNPDCKIEEFLQKTLDPPVYETIRNAIIVLQDIGALSFDEKLTELGER 773 Query: 1571 LGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIW 1392 LGSLP+HP TSKMLL +IL+NCLDPALT+A AS Y+DPF LP++P E+ A AAK E Sbjct: 774 LGSLPVHPLTSKMLLISILLNCLDPALTMACASDYRDPFTLPMLPNEKNKAAAAKAELAS 833 Query: 1391 THGGYSDQLAVVAAFNSWREAKNRG---KFCANYYISNATMFMIDGMRHQLWGELRQKGL 1221 +GG SDQLAVVAAF W+ A+ G +FC+ Y++S+ TM M+ GMR QL EL + G Sbjct: 834 WYGGRSDQLAVVAAFEGWKNARETGQESRFCSKYFVSSGTMHMLSGMRKQLASELLRNGF 893 Query: 1220 VPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHST 1041 +P + SC+LN+QD GIL AVL+AG YPMVG +LP L + +KAV+ T+ G+KVR+ PHST Sbjct: 894 IPGDGSSCNLNAQDPGILHAVLVAGLYPMVGRLLPPLKNNKKAVIETAGGDKVRLSPHST 953 Query: 1040 LFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAP---- 873 FKL ++P L+A+DEI R D I++CT++ P LLLLATE+VVAP Sbjct: 954 NFKLSFQKFYEQP-----LIAYDEITRGDGGLLIRNCTVIGPLPLLLLATEIVVAPGNEE 1008 Query: 872 ----LXXXXXXXXXXXXXXXXXXDVSKSLP-----EKTMSIPDNLVSIVVDRWLRFEATS 720 ++ L EK MS PDN V ++VDRW+ FE+T+ Sbjct: 1009 DDDGNDDDESDYEDADEDNGEEGNIKADLSEAHQGEKIMSSPDNTVKVIVDRWIPFESTA 1068 Query: 719 LDAAQLYCLRERLSAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDG 579 LD AQ+YCLRERL+AA+ FKV HP LP +L S+ A+ C+LSY+G Sbjct: 1069 LDVAQIYCLRERLAAAILFKVTHPGKVLPEVLAASINAMGCILSYNG 1115 >emb|CBI22072.3| unnamed protein product [Vitis vinifera] Length = 1190 Score = 1032 bits (2668), Expect = 0.0 Identities = 515/934 (55%), Positives = 686/934 (73%), Gaps = 11/934 (1%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 I E RSKLPIA+FKD ITS I+SH+VV+I+GETGCGKTTQVPQ++LD+MW + ++C+I+C Sbjct: 175 ITEGRSKLPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGKGEACKIVC 234 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISATSVAER++ E+GEN+G +VGY+IR+ESKGG++SSI+FCTNG+LLR L++ G+ Sbjct: 235 TQPRRISATSVAERISFEKGENVGDSVGYKIRLESKGGRHSSIIFCTNGILLRVLVSKGT 294 Query: 2987 PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMS 2808 + D THIIVDEIHERDRY+DF+L ILRD+L P+LRLILMS Sbjct: 295 D---------------RDISDITHIIVDEIHERDRYSDFMLAILRDMLASYPHLRLILMS 339 Query: 2807 ATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNF-- 2634 ATIDAE FS+YF CP+IRVPGFTYPV+T+YLED+L +L Sbjct: 340 ATIDAERFSQYFGGCPIIRVPGFTYPVKTFYLEDVLSILKSTGNNNLDSTLLSLPVEDPK 399 Query: 2633 ------AAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFY 2472 A+DEA+N+A+S+D FD L++ ++ +++NYQHS +G+TPLMV A KG+ Sbjct: 400 LIEDYGVALDEAINLAWSNDEFDPLLDFVSSEGTPQVFNYQHSSTGLTPLMVFAGKGRVA 459 Query: 2471 EVSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKKY 2292 +V ++L GA+ LK D TALD A++EN E AE+I + ME + E E+QLL KY Sbjct: 460 DVCMMLSFGADCHLKANDDTTALDLAERENHREAAEMIKQHMENLLSNSVE-EQQLLDKY 518 Query: 2291 VSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHF 2112 ++ + + ++V L+ LL+KIC + A+L+FLPGW++I R R++LL + F Sbjct: 519 LATNNPEIIDVALVEQLLRKICNDSKDG-------AILVFLPGWDDINRTREKLLSASFF 571 Query: 2111 KDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMK 1932 KDSSK++++ LHS++ S EQKKVF+ PPPG RKI+L+TNI+ET++TIDD+ VIDSG MK Sbjct: 572 KDSSKFVVISLHSMVPSVEQKKVFKRPPPGCRKIVLSTNISETAITIDDVVYVIDSGRMK 631 Query: 1931 EKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKR 1752 EKSYDPY NVSTL +WISKASA+QREGRAGRC+PGVCYHL+SK+RAA+LP++Q+PEIKR Sbjct: 632 EKSYDPYNNVSTLQSAWISKASAKQREGRAGRCRPGVCYHLYSKLRAASLPDFQVPEIKR 691 Query: 1751 ASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQ 1572 +EELCLQ+KLL +C I DF++K +DPP+ ++RNA+I+LQ+IGA++ +EKLT+LG++ Sbjct: 692 MPIEELCLQVKLLDPNCKIEDFLRKTLDPPVFETIRNAVIVLQDIGALSVDEKLTELGKK 751 Query: 1571 LGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIW 1392 LGSLP+HP TSKML FAIL+NCLDPALT+A AS Y+DPF LP++P E+K A AAK E Sbjct: 752 LGSLPVHPLTSKMLFFAILLNCLDPALTLACASDYRDPFTLPMLPHEKKRATAAKAELAS 811 Query: 1391 THGGYSDQLAVVAAFNSWREAKNRG---KFCANYYISNATMFMIDGMRHQLWGELRQKGL 1221 +GG+SDQLAV+AAF W+ AK +G +FC+ Y++S+ TM M+ GMR QL EL + G Sbjct: 812 LYGGHSDQLAVIAAFECWKSAKEKGQEAQFCSQYFVSSGTMHMLAGMRKQLQTELIRNGF 871 Query: 1220 VPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHST 1041 +PE++ SCSLN++D GI+ AVL+AG YPMVG +LP SG+++VV T+ G KVR+HPHS Sbjct: 872 IPEDVSSCSLNARDPGIIHAVLVAGLYPMVGRLLPPHKSGKRSVVETASGAKVRLHPHSN 931 Query: 1040 LFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPLXXX 861 FKL S K S L+ +DEI R D I++CT++ P LLLLATE+VVAP Sbjct: 932 NFKL-----SFKKSDGRPLIIYDEITRGDGGMHIRNCTVIGPLPLLLLATEIVVAP---- 982 Query: 860 XXXXXXXXXXXXXXXDVSKSLPEKTMSIPDNLVSIVVDRWLRFEATSLDAAQLYCLRERL 681 ++ EK MS PDN V++VVDRW FE+T+LD AQ+YCLRERL Sbjct: 983 ----------GKANNKLNGQQGEKIMSSPDNTVAVVVDRWHSFESTALDVAQIYCLRERL 1032 Query: 680 SAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDG 579 +AA+ FK H + LPP+LG SVYAIAC+LSYDG Sbjct: 1033 TAAIFFKATHAREVLPPMLGASVYAIACILSYDG 1066 >ref|XP_001763578.1| predicted protein [Physcomitrella patens] gi|162685371|gb|EDQ71767.1| predicted protein [Physcomitrella patens] Length = 1143 Score = 1005 bits (2599), Expect = 0.0 Identities = 519/953 (54%), Positives = 678/953 (71%), Gaps = 12/953 (1%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 I EKRS LPIA+FKD IT+ +D H+VV+IAGETGCGKTTQVPQYILDHMWSQ K CRI+C Sbjct: 192 IAEKRSTLPIASFKDEITAVVDKHQVVLIAGETGCGKTTQVPQYILDHMWSQNKPCRIIC 251 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISATSVAER+A ERGEN+G TVGYQIR+ESKGG++SS+MFCTNGVLLRKL+ SG Sbjct: 252 TQPRRISATSVAERIAAERGENVGNTVGYQIRLESKGGRHSSLMFCTNGVLLRKLVGSGR 311 Query: 2987 -PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILM 2811 L E + + + + S LDATH+IVDEIHERDR ADFLLI+LRDLL ++PNLRLILM Sbjct: 312 LKLKENESVLDE--SEEFSGLDATHVIVDEIHERDRNADFLLIVLRDLLALKPNLRLILM 369 Query: 2810 SATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNFA 2631 SAT+DA+LFS YF++CPV+RVPGFT+PV+TYYLED+L L + Sbjct: 370 SATLDADLFSSYFNNCPVVRVPGFTFPVRTYYLEDVLALTENQQSSNQNGRNSEKKLSLT 429 Query: 2630 -----AMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFYEV 2466 +MDEA+ +A+ +D+F+TLM+ I + P L + NY+HS +G T LMV+A KG+ +V Sbjct: 430 EEDVQSMDEAIQLAWLEDDFETLMDTIEEFPRLNLCNYKHSLTGATALMVSAGKGRVEDV 489 Query: 2465 SLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQ-LLKKYV 2289 LLL LGA+ +G TA DWA+ QEEV ++++ M Q Q + E LL+ Y Sbjct: 490 KLLLSLGADISAAANNGHTAFDWAKNNGQEEVVSILTEHMVKVQQAQFQAAETALLQNYQ 549 Query: 2288 SNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHFK 2109 + D+DE++V LI LL ++ E GAVL+FLPGWE+I+R R+ L SP F Sbjct: 550 MSADQDEIDVALIERLLHRLHE--AAGERLDTQGAVLVFLPGWEDISRLRECLQVSPIFG 607 Query: 2108 DSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMKE 1929 + S++++LPLHSL+ SSEQ+KVF+ PP GV KI+LATNIAET++TIDDI VID+G MKE Sbjct: 608 NPSRFLLLPLHSLVPSSEQRKVFQSPPSGVCKIVLATNIAETAITIDDIVYVIDTGRMKE 667 Query: 1928 KSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKRA 1749 KSYDPY NVSTL WISKASA+QREGRAGRCQPGVCYHLFS++R ALPE+Q+PEIKR Sbjct: 668 KSYDPYSNVSTLQTVWISKASAKQREGRAGRCQPGVCYHLFSRLRMQALPEFQLPEIKRT 727 Query: 1748 SLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQL 1569 LEELCLQ+KL I++F+ +A+DPPLE++VRNA+ LLQ+IGA+ +E LT++G+QL Sbjct: 728 PLEELCLQVKLYEPHGRIAEFILRALDPPLEIAVRNAVTLLQDIGALTSDELLTEMGKQL 787 Query: 1568 GSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIWT 1389 GSLP+HP+TS+M+L AIL+NCLDPALT+A A+ ++DPF+LP+ P ++K A A+QE Sbjct: 788 GSLPVHPSTSRMILLAILLNCLDPALTVACAAGFRDPFVLPLHPYQKKQAQHARQELAAM 847 Query: 1388 HGGYSDQLAVVAAFNSWREAKNRGK---FCANYYISNATMFMIDGMRHQLWGELRQKGLV 1218 +GG SD L++VAAF+ W A+ G+ FC+ Y++S TMF + GMR QL GEL QKG + Sbjct: 848 YGGSSDHLSIVAAFDRWENARVNGQESNFCSRYFVSGGTMFQLAGMRQQLQGELVQKGFI 907 Query: 1217 PENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHSTL 1038 H CSLN++D GI+RAVL AG YPMVG +LP LP KA+V T+RGEKVR+HPHS Sbjct: 908 KMEPHPCSLNARDPGIVRAVLAAGMYPMVGNLLPPLPGSAKAIVQTARGEKVRIHPHSIS 967 Query: 1037 FKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPLXXXX 858 + + L+ FDE+ R +A ++ CTL+ P+ L+LL+TEMV+ Sbjct: 968 IQPNELASMDQTKLNQLLVVFDEVTRGEAQVYVRKCTLITPHPLILLSTEMVIT---FPD 1024 Query: 857 XXXXXXXXXXXXXXDVSKSLP--EKTMSIPDNLVSIVVDRWLRFEATSLDAAQLYCLRER 684 S+ +P + MS D LVS+VVDR F +T+LD AQL+ LR R Sbjct: 1025 GKESAALEPSSVKERPSREVPAQHRLMSSADALVSVVVDRRFYFSSTALDGAQLFVLRSR 1084 Query: 683 LSAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPSDMDRREFHSQ 525 ++AA+ FKV P LP +L +SV+AIAC+LS+D + +PS R S+ Sbjct: 1085 MNAALNFKVTQPRLYLPAVLADSVHAIACILSFDAMPAMALPSTSHRGSSRSR 1137 >ref|XP_004147777.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis sativus] Length = 1230 Score = 999 bits (2582), Expect = 0.0 Identities = 520/1020 (50%), Positives = 708/1020 (69%), Gaps = 27/1020 (2%) Frame = -3 Query: 3338 KRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILCSQP 3159 KRSKLPIA+F+D ITS ++SH+VV+I+GETGCGKTTQVPQ++LD+MW + ++C+I+C+QP Sbjct: 166 KRSKLPIASFEDVITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQP 225 Query: 3158 RRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGSPLP 2979 RRISA SV+ER++ ERGEN+G +GY+IR+ESKGG++SSI+ CTNG+LLR LI+ G Sbjct: 226 RRISAVSVSERISYERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGL--- 282 Query: 2978 EGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMSATI 2799 + + RK+ K + D THIIVDE+HERDRY+DF+L ILRDLL P+LRLILMSATI Sbjct: 283 GKLTMEASRKSRKNVVSDLTHIIVDEVHERDRYSDFILTILRDLLPSYPHLRLILMSATI 342 Query: 2798 DAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKL--------LXXXXXXXXXXXXXXXX 2643 DAE FSKYF CP+I VPGFTYPV+ +YLED+L + L Sbjct: 343 DAERFSKYFGGCPIISVPGFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDGEPELTE 402 Query: 2642 XNFAAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFYEVS 2463 + +DE++++A+ +D FD L+E++A +I+NYQHS +G+TPLMV A KG+ +V Sbjct: 403 EDKLDLDESIDMAWLNDEFDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVC 462 Query: 2462 LLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKKYVSN 2283 +LL GA L+ +DG TAL+ A++ +Q+E AE I K +E S+ S+ E +L+ Y++ Sbjct: 463 MLLSFGATCELQAKDGSTALELAERGDQKETAEAIRKHLESSMS-NSKEERRLIGAYLAK 521 Query: 2282 TDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHFKDS 2103 + + V+V+LI LL KIC GA+L+FLPGW++I++ R++L +P FKD+ Sbjct: 522 -NSNSVDVRLIEQLLGKIC-------LDSKEGAILVFLPGWDDISKTRERLSINPLFKDA 573 Query: 2102 SKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMKEKS 1923 SK++I+ LHS++ S EQKKVFR PPPG RKIIL+TNIAET++TIDD+ VIDSG+MKEKS Sbjct: 574 SKFLIISLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKS 633 Query: 1922 YDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKRASL 1743 YDPY NVST SWISKASA+QREGRAGRCQPG+CYHL+SK RA++LP++Q+PEIKR + Sbjct: 634 YDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPI 693 Query: 1742 EELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQLGS 1563 EELCLQ+KLL +C I DF++K +DPP+ ++RNAI++LQ+IGA++ +EKLT+LG++LGS Sbjct: 694 EELCLQVKLLDPNCKIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGKKLGS 753 Query: 1562 LPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIWTHG 1383 LP+HP TSKML+FAILMNCL PALT+A AS YKDPF LP++P ERK A AAK E +G Sbjct: 754 LPVHPVTSKMLIFAILMNCLGPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYG 813 Query: 1382 GYSDQLAVVAAFNSWREAKNRG---KFCANYYISNATMFMIDGMRHQLWGELRQKGLVPE 1212 G+SDQLAVVAAF+ W+ K RG +FC+ YYIS++TM M+ GMR QL EL Q G +PE Sbjct: 814 GHSDQLAVVAAFDCWKNVKGRGQEVRFCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPE 873 Query: 1211 NLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHSTLFK 1032 ++ +C+LN+ D GIL AVL+AG YPMVG +LP G++AVV T G +V +HP S F+ Sbjct: 874 DVSTCNLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGSRVLLHPQSLNFE 933 Query: 1031 LVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPLXXXXXX 852 L S K + + L+ +DE+ R D T I++CT+V P LL++A ++ VAP Sbjct: 934 L-----SLKQTDSHPLIVYDEVTRGDGGTHIRNCTIVGPLPLLMVAKDIAVAPAKESNNR 988 Query: 851 XXXXXXXXXXXXDV---------------SKSLPEK-TMSIPDNLVSIVVDRWLRFEATS 720 S PE+ MS PDN V++VVDRWL+F + + Sbjct: 989 KGGTKNKNKGNGKAGIDETAQEKMDIENKSNQQPEEMIMSSPDNSVTVVVDRWLQFWSKA 1048 Query: 719 LDAAQLYCLRERLSAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPSDMDRR 540 LD AQLYCLRERLS+A+ FKVKHP+ LPP+LG S++A+AC+LSYDG + + S Sbjct: 1049 LDIAQLYCLRERLSSAILFKVKHPNGVLPPVLGASMHALACILSYDGLSGISLESVEMLT 1108 Query: 539 EFHSQVPTAPNTPGRMGGFTPRSKQIADSSFSSNTAKGPIRNNHQTDVPKTTGANAIQQK 360 + PGR G + + + +S + + R + + K A QQ+ Sbjct: 1109 SMVNATEIGHFAPGRSIGTHKKDVRTSPNSVYARSTPQSQREHKPFKLGKDQDAAQQQQQ 1168 >ref|XP_004161565.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX36-like [Cucumis sativus] Length = 1286 Score = 996 bits (2576), Expect = 0.0 Identities = 509/955 (53%), Positives = 687/955 (71%), Gaps = 27/955 (2%) Frame = -3 Query: 3338 KRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILCSQP 3159 KRSKLPIA+F+D ITS ++SH+VV+I+GETGCGKTTQVPQ++LD+MW + ++C+I+C+QP Sbjct: 166 KRSKLPIASFEDVITSTVESHQVVLISGETGCGKTTQVPQFLLDYMWGKGETCKIVCTQP 225 Query: 3158 RRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGSPLP 2979 RRISA SV+ER++ ERGEN+G +GY+IR+ESKGG++SSI+ CTNG+LLR LI+ G Sbjct: 226 RRISAVSVSERISYERGENVGSDIGYKIRLESKGGRHSSIVLCTNGILLRVLISEGL--- 282 Query: 2978 EGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMSATI 2799 + + RK+ K + D THIIVDE+HERDRY+DF+L ILRDLL P+LRLILMSATI Sbjct: 283 GKLTMEASRKSRKNVVSDLTHIIVDEVHERDRYSDFILTILRDLLPSYPHLRLILMSATI 342 Query: 2798 DAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKL--------LXXXXXXXXXXXXXXXX 2643 DAE FSKYF CP+I VPGFTYPV+ +YLED+L + L Sbjct: 343 DAERFSKYFGGCPIISVPGFTYPVKNFYLEDVLSIVKSSEENHLDDSIVGVSDGEPELTE 402 Query: 2642 XNFAAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFYEVS 2463 + +DE++++A+ +D FD L+E++A +I+NYQHS +G+TPLMV A KG+ +V Sbjct: 403 EDKLDLDESIDMAWLNDEFDPLLELVASGGSSQIFNYQHSVTGLTPLMVLAGKGRVSDVC 462 Query: 2462 LLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKKYVSN 2283 +LL GA L+ +DG TAL+ A++ +Q+E AE I K +E S+ S+ E +L+ Y++ Sbjct: 463 MLLSFGATCELQAKDGSTALELAERGDQKETAEAIRKHLESSMS-NSKEERRLIGAYLAK 521 Query: 2282 TDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHFKDS 2103 + + V+V+LI LL KIC GA+L+FLPGW++I++ R++L +P FKD+ Sbjct: 522 -NSNSVDVRLIEQLLGKIC-------LDSKEGAILVFLPGWDDISKTRERLSINPLFKDA 573 Query: 2102 SKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMKEKS 1923 SK++I+ LHS++ S EQKKVFR PPPG RKIIL+TNIAET++TIDD+ VIDSG+MKEK Sbjct: 574 SKFLIISLHSMVPSKEQKKVFRRPPPGCRKIILSTNIAETAITIDDVVYVIDSGWMKEKX 633 Query: 1922 YDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKRASL 1743 YDPY NVST SWISKASA+QREGRAGRCQPG+CYHL+SK RA++LP++Q+PEIKR + Sbjct: 634 YDPYSNVSTFQSSWISKASAKQREGRAGRCQPGICYHLYSKFRASSLPDFQVPEIKRMPI 693 Query: 1742 EELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQLGS 1563 EELCLQ+KLL +C I DF++K +DPP+ ++RNAI++LQ+IGA++ +EKLT+LG++LGS Sbjct: 694 EELCLQVKLLDPNCKIEDFLQKTLDPPVFDTIRNAILVLQDIGALSLDEKLTELGKKLGS 753 Query: 1562 LPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIWTHG 1383 LP+HP TSKML+FAILMNCL PALT+A AS YKDPF LP++P ERK A AAK E +G Sbjct: 754 LPVHPVTSKMLIFAILMNCLGPALTLACASDYKDPFTLPMLPSERKKAAAAKAELASLYG 813 Query: 1382 GYSDQLAVVAAFNSWREAKNRG---KFCANYYISNATMFMIDGMRHQLWGELRQKGLVPE 1212 G+SDQLAVVAAF+ W+ K RG +FC+ YYIS++TM M+ GMR QL EL Q G +PE Sbjct: 814 GHSDQLAVVAAFDCWKNVKGRGQEVRFCSKYYISSSTMTMLSGMRRQLEMELVQNGFIPE 873 Query: 1211 NLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHSTLFK 1032 ++ +C+LN+ D GIL AVL+AG YPMVG +LP G++AVV T G +V +HP S F+ Sbjct: 874 DVSTCNLNACDPGILHAVLVAGLYPMVGRLLPPQKKGKRAVVETGSGSRVLLHPQSLNFE 933 Query: 1031 LVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPLXXXXXX 852 L S K + + L+ +DE+ R D T I++CT+V P LL++A ++ VAP Sbjct: 934 L-----SLKQTDSHPLIVYDEVTRGDGGTHIRNCTIVGPLPLLMVAKDIAVAPAKESNNR 988 Query: 851 XXXXXXXXXXXXDV---------------SKSLPEK-TMSIPDNLVSIVVDRWLRFEATS 720 S PE+ MS PDN V++VVDRWL+F + + Sbjct: 989 KGGTKNKNKGNGKAGIDETAQEKMDIENKSNQQPEEMIMSSPDNSVTVVVDRWLQFWSKA 1048 Query: 719 LDAAQLYCLRERLSAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPS 555 LD AQLYCLRERLS+A+ FKVKHP+ LPP+LG S++A+AC+LSYDG + + S Sbjct: 1049 LDIAQLYCLRERLSSAILFKVKHPNGVLPPVLGASMHALACILSYDGLSGISLES 1103 >ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis] gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase, putative [Ricinus communis] Length = 1229 Score = 991 bits (2563), Expect = 0.0 Identities = 511/988 (51%), Positives = 694/988 (70%), Gaps = 35/988 (3%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 IVE+RSKLPIA+F+D ITS ++SH++V+I+GETGCGKTTQVPQY+L++ W + ++C+I+C Sbjct: 173 IVEQRSKLPIASFRDVITSTVESHQIVLISGETGCGKTTQVPQYLLEYKWGKCEACKIIC 232 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISA SVAER+++ERGEN+G +GY+IR+ESKGGKNSSI+ CTNGVLLR L++ G+ Sbjct: 233 TQPRRISAISVAERISSERGENVGDDIGYKIRLESKGGKNSSIVLCTNGVLLRLLVSRGT 292 Query: 2987 PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMS 2808 + KK K +K + + THIIVDEIHERDRY+DF+L I+RD+L P+LRLILMS Sbjct: 293 RRSK----KKSSKNAKDDISNITHIIVDEIHERDRYSDFILAIIRDILPSYPHLRLILMS 348 Query: 2807 ATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNF-- 2634 AT+D+E FS+YF CP++RVPGFTYPV+ +YLED+L +L Sbjct: 349 ATLDSERFSQYFGGCPIVRVPGFTYPVKNFYLEDVLSILNSADNNHIDSAMPSIPIKSHE 408 Query: 2633 ------AAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFY 2472 AA+DEA+N+A+++D FDTL+++++ E+YN+Q S +G++PLMV A KG+ Sbjct: 409 LREEDRAAVDEAINLAWTNDEFDTLLDLVSSEGIPEVYNFQESSTGLSPLMVFAGKGRVD 468 Query: 2471 EVSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKKY 2292 +V +LL A+ L+D+DG TAL+WA++ENQ E AE++ + +E S E ++QLL Y Sbjct: 469 DVCMLLSFNADCHLQDKDGLTALEWAKRENQHETAEVLKRHVEVSPTDCRE-QQQLLDNY 527 Query: 2291 VSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHF 2112 + + + V+V LI LL+KIC + A+L+FLPGW++I R R+ LL +P F Sbjct: 528 LGKINPELVDVSLIERLLRKICISSRDG-------AILVFLPGWDDIRRTREGLLANPFF 580 Query: 2111 KDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMK 1932 KDSSK++I+ LHS++ S EQKKVF+ PP G RKIIL+TNIAETS+TIDD+ VIDSG MK Sbjct: 581 KDSSKFLIISLHSMVPSMEQKKVFKRPPQGCRKIILSTNIAETSITIDDVIYVIDSGRMK 640 Query: 1931 EKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKR 1752 EKSYDPY NVSTL SW+SKAS++QREGRAGRCQPG+CYHL+SK+RAA++P++Q+PEI+R Sbjct: 641 EKSYDPYNNVSTLQSSWVSKASSKQREGRAGRCQPGMCYHLYSKLRAASMPDFQVPEIRR 700 Query: 1751 ASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQ 1572 +EELCLQ+KLL +C I +F+ K +DPP+ ++RNAI++LQ+IGA++ +E+LT++G + Sbjct: 701 MPIEELCLQVKLLDPNCKIEEFLGKMLDPPVPETIRNAILVLQDIGALSPDEQLTEVGEK 760 Query: 1571 LGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIW 1392 LG LP+HP SKML FAILMNCLDPALT+A AS Y+DPF LPV+P E+K A A K E Sbjct: 761 LGCLPVHPLISKMLFFAILMNCLDPALTMACASDYRDPFTLPVLPNEKKRAAATKFELAS 820 Query: 1391 THGGYSDQLAVVAAFNSWREAKNRG---KFCANYYISNATMFMIDGMRHQLWGELRQKGL 1221 +GG SDQLAV+AA+ W+ AK RG +FC+ Y+IS++TM M+ GMR QL EL + G Sbjct: 821 LYGGRSDQLAVIAAYECWKNAKERGQEARFCSQYFISSSTMIMLHGMRKQLLSELIRNGF 880 Query: 1220 VPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHST 1041 + E+ C++NS D GIL AVL+AG YPMVG +LP +G++ +V T+ G KVR+HP S Sbjct: 881 IQEDASCCNVNSHDPGILYAVLVAGLYPMVGRVLPP-RNGKRFIVETATGAKVRLHPQSL 939 Query: 1040 LFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPLXXX 861 FKL+ N++ S L+ FDEI R + +I++CT+V P ALLLLATE+VV P Sbjct: 940 NFKLLS-NKTDDCS----LIIFDEITRGEWGMNIRNCTIVGPLALLLLATEIVVTPAKDH 994 Query: 860 XXXXXXXXXXXXXXXDVSKS----------------LPEKTMSIPDNLVSIVVDRWLRFE 729 + EK MS PDN V++VVDRWL F Sbjct: 995 DEEDNEGDDNNDGSDTAPEDEGDEDKMEIDDRLGGHNDEKIMSSPDNSVNVVVDRWLYFS 1054 Query: 728 ATSLDAAQLYCLRERLSAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPSD- 552 +T+L+ AQ+YCLRERLSAA+ F+V HP LPP L S+ A AC+LSYDG + +P + Sbjct: 1055 STALEVAQIYCLRERLSAAILFRVMHPKQELPPALAASMRATACVLSYDGQSGISLPQES 1114 Query: 551 -------MDRREFHSQVPTAPNTPGRMG 489 +D E S TAP MG Sbjct: 1115 VDSLASMVDATEIDS---TAPGRRKAMG 1139 >gb|EOX93089.1| ATP-dependent RNA helicase, putative isoform 2 [Theobroma cacao] Length = 1181 Score = 990 bits (2559), Expect = 0.0 Identities = 502/951 (52%), Positives = 677/951 (71%), Gaps = 28/951 (2%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 I E+ SKLPIA+F+D ITS ++SH+VV+I+GETGCGKTTQVPQY+LD+MW + K+C+++C Sbjct: 164 INEEMSKLPIASFRDVITSTVESHQVVLISGETGCGKTTQVPQYLLDYMWGKGKACKVVC 223 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISATSV+ER++ ERGEN+G VGY+IR+E KGG++SSI+FCTNGVLLR L+++ Sbjct: 224 TQPRRISATSVSERISNERGENVGNDVGYKIRLERKGGRHSSIVFCTNGVLLRVLVSNS- 282 Query: 2987 PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMS 2808 ++ + + D THII+DEIHERD + DF+L I+RD+L P+LRL+LMS Sbjct: 283 ------------RSKREDISDMTHIIMDEIHERDCFCDFMLAIIRDILPSYPHLRLVLMS 330 Query: 2807 ATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNFA- 2631 AT+DAE FS+YF CP+I VPGFTYPV+ +YLED+L +L Sbjct: 331 ATLDAERFSQYFGGCPIIHVPGFTYPVKAFYLEDVLSILKSADNNHLISASASFPNEDPE 390 Query: 2630 -------AMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFY 2472 A+DEA+ +A S D FD L+E+++ +++NYQHS +G+TPLMV A KG+ Sbjct: 391 LTEEDKIALDEAI-LACSTDEFDPLLELVSVEGGSKVHNYQHSLTGLTPLMVFAGKGRVA 449 Query: 2471 EVSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKKY 2292 +V +LL G + L+ +DGK AL+WA++ENQ+E AE+I K M+ + E ++QLL KY Sbjct: 450 DVCMLLSFGVDCHLRSKDGKRALEWAEQENQQEAAEIIKKHMQSLLSNSGE-QQQLLDKY 508 Query: 2291 VSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHF 2112 + D + ++V LI LL+KIC + A+L+FLPGWE+I R R++LL +P F Sbjct: 509 IEAVDPEIIDVVLIEQLLRKICIDTNEG-------AILVFLPGWEDINRTREKLLANPFF 561 Query: 2111 KDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMK 1932 KDSS++II+ LHS++ S+EQKKVF+ PP G RKI+L+TNIAE+S+TIDD+ VIDSG MK Sbjct: 562 KDSSRFIIISLHSMVPSAEQKKVFKRPPFGCRKIVLSTNIAESSITIDDVVYVIDSGRMK 621 Query: 1931 EKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKR 1752 EKSYDPY NVSTL SW+SKA+A+QREGRAGRCQPG CYHL+SK+RAA++P++Q+PEIKR Sbjct: 622 EKSYDPYNNVSTLQSSWVSKANAKQREGRAGRCQPGTCYHLYSKLRAASMPDFQVPEIKR 681 Query: 1751 ASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQ 1572 +EELCLQ+KLL +C + +F++K +DPP+ ++RNA+ +LQ+IGA +++E+LT+LG + Sbjct: 682 MPIEELCLQVKLLDPNCKVENFLQKTLDPPVSEAIRNAVSVLQDIGAFSYDEELTELGEK 741 Query: 1571 LGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIW 1392 LG LP+HP TSKML FAILMNCLDPALT+A AS ++DPF+LP+ P ++K A AA++E Sbjct: 742 LGYLPVHPLTSKMLFFAILMNCLDPALTLACASDFRDPFVLPMFPNDKKKAAAAREELAS 801 Query: 1391 THGGYSDQLAVVAAFNSWREAKNR---GKFCANYYISNATMFMIDGMRHQLWGELRQKGL 1221 +GG SDQLAV+AAF W+ AK R G+FC+ Y++S++TM M+ GMR QL EL + G Sbjct: 802 LYGGQSDQLAVIAAFECWKHAKERGQEGRFCSKYFVSSSTMNMLFGMRKQLQAELMRFGF 861 Query: 1220 VPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHST 1041 +P+++ SCSLN+ D GIL AVL+AG YPMVG +LP L G++ VV T+ G KVR+H HS Sbjct: 862 IPDDVSSCSLNAHDPGILHAVLVAGLYPMVGRLLP-LRQGKRFVVETAGGSKVRLHTHSI 920 Query: 1040 LFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPL--- 870 KL S K S+ L+ +DEI R D I++CT++ P LLLLATE+ VAP Sbjct: 921 NSKL-----SLKQSNDCPLIMYDEITRGDGGMHIRNCTVIGPLPLLLLATEIAVAPAKGN 975 Query: 869 ------------XXXXXXXXXXXXXXXXXXDVSKS--LPEKTMSIPDNLVSIVVDRWLRF 732 VSKS EK MS PDN V +VVDRWL F Sbjct: 976 DDNEDDDDDDDDDDGSDDADECDTDGDEMLMVSKSGGNEEKVMSSPDNSVMVVVDRWLSF 1035 Query: 731 EATSLDAAQLYCLRERLSAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDG 579 +T+ D AQ+YCLRERLSAA+ KV HPH L P+LG S+YAIAC+LSYDG Sbjct: 1036 RSTAFDVAQIYCLRERLSAAILSKVLHPHQVLTPVLGASIYAIACILSYDG 1086 >gb|EOX93088.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao] gi|508701194|gb|EOX93090.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao] Length = 1207 Score = 990 bits (2559), Expect = 0.0 Identities = 502/951 (52%), Positives = 677/951 (71%), Gaps = 28/951 (2%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 I E+ SKLPIA+F+D ITS ++SH+VV+I+GETGCGKTTQVPQY+LD+MW + K+C+++C Sbjct: 164 INEEMSKLPIASFRDVITSTVESHQVVLISGETGCGKTTQVPQYLLDYMWGKGKACKVVC 223 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISATSV+ER++ ERGEN+G VGY+IR+E KGG++SSI+FCTNGVLLR L+++ Sbjct: 224 TQPRRISATSVSERISNERGENVGNDVGYKIRLERKGGRHSSIVFCTNGVLLRVLVSNS- 282 Query: 2987 PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMS 2808 ++ + + D THII+DEIHERD + DF+L I+RD+L P+LRL+LMS Sbjct: 283 ------------RSKREDISDMTHIIMDEIHERDCFCDFMLAIIRDILPSYPHLRLVLMS 330 Query: 2807 ATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNFA- 2631 AT+DAE FS+YF CP+I VPGFTYPV+ +YLED+L +L Sbjct: 331 ATLDAERFSQYFGGCPIIHVPGFTYPVKAFYLEDVLSILKSADNNHLISASASFPNEDPE 390 Query: 2630 -------AMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFY 2472 A+DEA+ +A S D FD L+E+++ +++NYQHS +G+TPLMV A KG+ Sbjct: 391 LTEEDKIALDEAI-LACSTDEFDPLLELVSVEGGSKVHNYQHSLTGLTPLMVFAGKGRVA 449 Query: 2471 EVSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKKY 2292 +V +LL G + L+ +DGK AL+WA++ENQ+E AE+I K M+ + E ++QLL KY Sbjct: 450 DVCMLLSFGVDCHLRSKDGKRALEWAEQENQQEAAEIIKKHMQSLLSNSGE-QQQLLDKY 508 Query: 2291 VSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHF 2112 + D + ++V LI LL+KIC + A+L+FLPGWE+I R R++LL +P F Sbjct: 509 IEAVDPEIIDVVLIEQLLRKICIDTNEG-------AILVFLPGWEDINRTREKLLANPFF 561 Query: 2111 KDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMK 1932 KDSS++II+ LHS++ S+EQKKVF+ PP G RKI+L+TNIAE+S+TIDD+ VIDSG MK Sbjct: 562 KDSSRFIIISLHSMVPSAEQKKVFKRPPFGCRKIVLSTNIAESSITIDDVVYVIDSGRMK 621 Query: 1931 EKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKR 1752 EKSYDPY NVSTL SW+SKA+A+QREGRAGRCQPG CYHL+SK+RAA++P++Q+PEIKR Sbjct: 622 EKSYDPYNNVSTLQSSWVSKANAKQREGRAGRCQPGTCYHLYSKLRAASMPDFQVPEIKR 681 Query: 1751 ASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQ 1572 +EELCLQ+KLL +C + +F++K +DPP+ ++RNA+ +LQ+IGA +++E+LT+LG + Sbjct: 682 MPIEELCLQVKLLDPNCKVENFLQKTLDPPVSEAIRNAVSVLQDIGAFSYDEELTELGEK 741 Query: 1571 LGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIW 1392 LG LP+HP TSKML FAILMNCLDPALT+A AS ++DPF+LP+ P ++K A AA++E Sbjct: 742 LGYLPVHPLTSKMLFFAILMNCLDPALTLACASDFRDPFVLPMFPNDKKKAAAAREELAS 801 Query: 1391 THGGYSDQLAVVAAFNSWREAKNR---GKFCANYYISNATMFMIDGMRHQLWGELRQKGL 1221 +GG SDQLAV+AAF W+ AK R G+FC+ Y++S++TM M+ GMR QL EL + G Sbjct: 802 LYGGQSDQLAVIAAFECWKHAKERGQEGRFCSKYFVSSSTMNMLFGMRKQLQAELMRFGF 861 Query: 1220 VPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHST 1041 +P+++ SCSLN+ D GIL AVL+AG YPMVG +LP L G++ VV T+ G KVR+H HS Sbjct: 862 IPDDVSSCSLNAHDPGILHAVLVAGLYPMVGRLLP-LRQGKRFVVETAGGSKVRLHTHSI 920 Query: 1040 LFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPL--- 870 KL S K S+ L+ +DEI R D I++CT++ P LLLLATE+ VAP Sbjct: 921 NSKL-----SLKQSNDCPLIMYDEITRGDGGMHIRNCTVIGPLPLLLLATEIAVAPAKGN 975 Query: 869 ------------XXXXXXXXXXXXXXXXXXDVSKS--LPEKTMSIPDNLVSIVVDRWLRF 732 VSKS EK MS PDN V +VVDRWL F Sbjct: 976 DDNEDDDDDDDDDDGSDDADECDTDGDEMLMVSKSGGNEEKVMSSPDNSVMVVVDRWLSF 1035 Query: 731 EATSLDAAQLYCLRERLSAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDG 579 +T+ D AQ+YCLRERLSAA+ KV HPH L P+LG S+YAIAC+LSYDG Sbjct: 1036 RSTAFDVAQIYCLRERLSAAILSKVLHPHQVLTPVLGASIYAIACILSYDG 1086 >ref|XP_006484996.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Citrus sinensis] Length = 1233 Score = 988 bits (2553), Expect = 0.0 Identities = 519/1030 (50%), Positives = 711/1030 (69%), Gaps = 29/1030 (2%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 IVE+RSKLPI++FKD ITS +DS++VV+I+GETGCGKTTQVPQ++L+H+WS+ ++C+I+C Sbjct: 189 IVEERSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 248 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASG- 2991 +QPRRISATSVAER++ ERGENIG +GY+IR+ESKGGK+SSI+FCTNGVLLR L++ G Sbjct: 249 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 308 Query: 2990 SPLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILM 2811 S L E K +K + THIIVDEIHERDRY+DF+L I+RD+L P+LRLILM Sbjct: 309 SRLKEA-----SNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 363 Query: 2810 SATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNF- 2634 SAT+DA+ FS+YF CPVI+VPGFTYPV+++YLED+L +L Sbjct: 364 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDP 423 Query: 2633 -------AAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKF 2475 + +DEA+++A+S+D FD L+E+++ +YNYQH+ +G+TPLMV A KG+ Sbjct: 424 ELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGRV 483 Query: 2474 YEVSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKK 2295 +V +LL LGA+ LK +DG+TAL A++ENQ EVA++I K ME + + +++QLL K Sbjct: 484 GDVCMLLSLGADCQLKARDGRTALQLAEQENQPEVAQIIKKHMENA--LSDSMKQQLLDK 541 Query: 2294 YVSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPH 2115 Y++ + + +++ LI LL+KIC + A+L+FLPGWE+I + D+LL +P Sbjct: 542 YLATVNPELIDLVLIEQLLRKICMDSEDG-------AILVFLPGWEDINKTWDRLLANPF 594 Query: 2114 FKDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFM 1935 F+D+SK++I+PLHS++ S +QKKVF+ PPPG RKIIL+TNIAET++TIDD+ VIDSG M Sbjct: 595 FRDTSKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 654 Query: 1934 KEKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIK 1755 KEKSYDPY NVSTL SW+SKASA+QR GRAGRCQ G+CYHL+S++RAA+LP++Q+PEIK Sbjct: 655 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIK 714 Query: 1754 RASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGR 1575 R +EELCLQ+KLL +C+I DF++K +DPP+ +++RNAII+LQ+IGA++ +EK+T+LG Sbjct: 715 RIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGE 774 Query: 1574 QLGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFI 1395 +LG L +HP SKML FAILM+CLDPALT+A AS Y+DPF LP+ P E+K A AAK E Sbjct: 775 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 834 Query: 1394 WTHGGYSDQLAVVAAFNSWREAKNRGK---FCANYYISNATMFMIDGMRHQLWGELRQKG 1224 +GG SDQLAV+AAF W+ AK RG+ FC+ Y++S+ M M+ GMR QL EL + G Sbjct: 835 SLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 894 Query: 1223 LVPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHS 1044 +PE++ SCS N++ GI+ AVL+AG YPMV + P +GR+ V T+ G KVR+HPHS Sbjct: 895 FIPEDVSSCSHNARVPGIIHAVLMAGLYPMVARLRPPHKNGRR-FVETAGGAKVRLHPHS 953 Query: 1043 TLFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPL-- 870 FKL S K + L+ +DEI R D +++CT+V P LLLLATE+ VAP Sbjct: 954 LNFKL-----SFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPD 1008 Query: 869 -----------XXXXXXXXXXXXXXXXXXDVSKSLPEKTMSIPDNLVSIVVDRWLRFEAT 723 S E MS PD V+++VDRWL F +T Sbjct: 1009 NEDDDEDDDMSDDDADENESDEDCMEIDDKTSGQHGENVMSSPDKSVTVLVDRWLYFGST 1068 Query: 722 SLDAAQLYCLRERLSAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPSD--- 552 +LD AQ+YCLRERLS A+ FKV HP LPP+L S+YA+A +LSYDG + +P++ Sbjct: 1069 ALDIAQIYCLRERLSVAILFKVTHPQKALPPVLEASMYAMASILSYDGFSGISLPAESVE 1128 Query: 551 -MDRREFHSQVPTAPNTPGRMGGFTPRSKQIADSSFSSNTAKGPIRNNHQTDVPKTTGAN 375 + +++ P R G P S S NT + +H++ +P G+ Sbjct: 1129 SLTSMIQATEIDKCPAARNRGTGQNP--SNFLMSLMSPNTRQYFPLRDHKSRIPAHKGST 1186 Query: 374 AIQQKVVTQV 345 Q + TQV Sbjct: 1187 KGNQ-LSTQV 1195 >ref|XP_006437089.1| hypothetical protein CICLE_v10033885mg, partial [Citrus clementina] gi|557539285|gb|ESR50329.1| hypothetical protein CICLE_v10033885mg, partial [Citrus clementina] Length = 1197 Score = 988 bits (2553), Expect = 0.0 Identities = 519/1030 (50%), Positives = 711/1030 (69%), Gaps = 29/1030 (2%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 IVE RSKLPI++FKD ITS +DS++VV+I+GETGCGKTTQVPQ++L+H+WS+ ++C+I+C Sbjct: 181 IVEGRSKLPISSFKDVITSTVDSNQVVLISGETGCGKTTQVPQFLLEHIWSKGETCKIVC 240 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASG- 2991 +QPRRISATSVAER++ ERGENIG +GY+IR+ESKGGK+SSI+FCTNGVLLR L++ G Sbjct: 241 TQPRRISATSVAERISVERGENIGDNIGYKIRLESKGGKHSSIVFCTNGVLLRLLVSQGV 300 Query: 2990 SPLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILM 2811 S L E K +K + THIIVDEIHERDRY+DF+L I+RD+L P+LRLILM Sbjct: 301 SRLKEA-----SNKPAKDDVSALTHIIVDEIHERDRYSDFMLAIIRDMLPSYPHLRLILM 355 Query: 2810 SATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNF- 2634 SAT+DA+ FS+YF CPVI+VPGFTYPV+++YLED+L +L Sbjct: 356 SATLDADRFSQYFGGCPVIQVPGFTYPVKSFYLEDVLSILKSAESNHLDSASLIVPNEDP 415 Query: 2633 -------AAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKF 2475 + +DEA+++A+S+D FD L+E+++ +YNYQH+ +G+TPLMV A KG+ Sbjct: 416 ELTEENKSTLDEAISLAWSNDEFDMLLELVSLEGSPNVYNYQHTLTGLTPLMVLAGKGQV 475 Query: 2474 YEVSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKK 2295 +V +LL LGA+ LK +DG+TAL A++ENQ EVA++I K ME + + +++QLL K Sbjct: 476 GDVCMLLSLGADCQLKARDGRTALQLAEQENQAEVAQIIKKHMENA--LSDSMKQQLLDK 533 Query: 2294 YVSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPH 2115 Y++ + + +++ LI LL+KIC + A+L+FLPGWE+I + D+LL +P Sbjct: 534 YLATVNPELIDLVLIEQLLRKICMDSEDG-------AILVFLPGWEDINKTWDRLLANPF 586 Query: 2114 FKDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFM 1935 F+D+SK++I+P+HS++ S +QKKVF+ PPPG RKIIL+TNIAET++TIDD+ VIDSG M Sbjct: 587 FRDTSKFVIIPIHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRM 646 Query: 1934 KEKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIK 1755 KEKSYDPY NVSTL SW+SKASA+QR GRAGRCQ G+CYHL+S++RAA+LP++Q+PEIK Sbjct: 647 KEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGICYHLYSQLRAASLPDFQVPEIK 706 Query: 1754 RASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGR 1575 R +EELCLQ+KLL +C+I DF++K +DPP+ +++RNAII+LQ+IGA++ +EK+T+LG Sbjct: 707 RIPIEELCLQVKLLDPNCNIEDFLQKTLDPPVSVTIRNAIIVLQDIGALSLDEKVTELGE 766 Query: 1574 QLGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFI 1395 +LG L +HP SKML FAILM+CLDPALT+A AS Y+DPF LP+ P E+K A AAK E Sbjct: 767 KLGCLSVHPLMSKMLFFAILMDCLDPALTLACASDYRDPFTLPISPNEKKRATAAKFELA 826 Query: 1394 WTHGGYSDQLAVVAAFNSWREAKNRGK---FCANYYISNATMFMIDGMRHQLWGELRQKG 1224 +GG SDQLAV+AAF W+ AK RG+ FC+ Y++S+ M M+ GMR QL EL + G Sbjct: 827 SLYGGQSDQLAVIAAFECWKNAKQRGQEAWFCSQYFVSSGVMNMLLGMRKQLQTELIKNG 886 Query: 1223 LVPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHS 1044 +PE++ SCS N+ GI+ AVL+AG YPMV + P +GR+ V T+ G KVR+HPHS Sbjct: 887 FIPEDVSSCSHNAHVPGIIHAVLMAGLYPMVARLRPPHKNGRR-FVETAGGAKVRLHPHS 945 Query: 1043 TLFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPL-- 870 FKL S K + L+ +DEI R D +++CT+V P LLLLATE+ VAP Sbjct: 946 LNFKL-----SFKKTDDCPLMVYDEITRGDGGMHVRNCTVVGPLPLLLLATEIAVAPAPD 1000 Query: 869 -----------XXXXXXXXXXXXXXXXXXDVSKSLPEKTMSIPDNLVSIVVDRWLRFEAT 723 S+ E MS PD V+++VDRWL F +T Sbjct: 1001 NEDDDEDDDMSDDDADENESDEECMEIDDKTSEQHGENVMSSPDKSVTVLVDRWLYFGST 1060 Query: 722 SLDAAQLYCLRERLSAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPSD--- 552 +LD AQ+YCLRERLSAA+ FKV HP LPP+L S+YA+A +LSYDG + +P++ Sbjct: 1061 ALDIAQIYCLRERLSAAILFKVTHPQKALPPVLEASMYAMASILSYDGFSGISLPAESVE 1120 Query: 551 -MDRREFHSQVPTAPNTPGRMGGFTPRSKQIADSSFSSNTAKGPIRNNHQTDVPKTTGAN 375 + +++ P R G P S S NT + +H++ +P G+ Sbjct: 1121 SLTSMIQATEIDKCPAARNRGTGQNP--SNFLMSLMSPNTRQYFPLRDHKSRIPAHKGST 1178 Query: 374 AIQQKVVTQV 345 Q + TQV Sbjct: 1179 KGNQ-LSTQV 1187 >ref|XP_002307569.2| NUCLEAR DEIH-BOXHELICASE family protein [Populus trichocarpa] gi|550339560|gb|EEE94565.2| NUCLEAR DEIH-BOXHELICASE family protein [Populus trichocarpa] Length = 1207 Score = 976 bits (2524), Expect = 0.0 Identities = 515/1027 (50%), Positives = 690/1027 (67%), Gaps = 27/1027 (2%) Frame = -3 Query: 3347 IVEKRSKLPIATFKDSITSAIDSHKVVVIAGETGCGKTTQVPQYILDHMWSQRKSCRILC 3168 IVE RSKLPIA+F D ITS I+SH+VV+I+GETGCGKTTQVPQ++LDHMW + ++C+I+C Sbjct: 186 IVEGRSKLPIASFMDVITSTIESHQVVLISGETGCGKTTQVPQFLLDHMWGKGEACKIVC 245 Query: 3167 SQPRRISATSVAERVATERGENIGGTVGYQIRMESKGGKNSSIMFCTNGVLLRKLIASGS 2988 +QPRRISA SV+ER++ ERGEN+G +VGY+IR+ESKGGK+SSI+FCTNGVLLR L++ G Sbjct: 246 TQPRRISAISVSERISYERGENVGDSVGYKIRLESKGGKHSSIVFCTNGVLLRILVSKGI 305 Query: 2987 PLPEGMAGKKKRKASKTSLLDATHIIVDEIHERDRYADFLLIILRDLLKIQPNLRLILMS 2808 + A ++ DEIHERDR++DF+L I+RD+L +LRLILMS Sbjct: 306 TGSQNEANTAAKEN-------------DEIHERDRFSDFMLAIIRDILPSHSHLRLILMS 352 Query: 2807 ATIDAELFSKYFDDCPVIRVPGFTYPVQTYYLEDILKLLXXXXXXXXXXXXXXXXXNF-- 2634 AT+DAE FS+YF CP+IRVPGFTYPV+ ++LED+L +L Sbjct: 353 ATLDAERFSQYFGGCPIIRVPGFTYPVKAFHLEDVLSILNSRDDNHLDSAMPNVLDEGHE 412 Query: 2633 ------AAMDEALNIAFSDDNFDTLMEMIADSPHLEIYNYQHSESGVTPLMVAAAKGKFY 2472 AA+DEA+N+A+S+D FD+L+++++ ++Y+YQHS SG+TPLMV A KG+ Sbjct: 413 LTEEDKAALDEAINLAWSNDEFDSLLDLVSSEGTPKVYDYQHSVSGLTPLMVFAGKGRVG 472 Query: 2471 EVSLLLDLGANFLLKDQDGKTALDWAQKENQEEVAELISKQMEGSVQMQSEVEEQLLKKY 2292 +V +LL LGAN L+ + G TAL WA++ENQEE AE+I K + ++ SE ++QLL KY Sbjct: 473 DVCMLLSLGANCNLQSKCGLTALKWAERENQEEAAEVIRKHAQNALADSSE-QQQLLDKY 531 Query: 2291 VSNTDEDEVNVQLIVNLLKKICENXXXXXXXXXXGAVLIFLPGWEEITRCRDQLLKSPHF 2112 ++ + + ++V LI L+KKIC + A+L+FLPGW++I R R++LL +P F Sbjct: 532 MATINPELIDVVLIEQLIKKICVDSKDG-------AILVFLPGWDDINRTRERLLANPFF 584 Query: 2111 KDSSKYIILPLHSLIASSEQKKVFRHPPPGVRKIILATNIAETSVTIDDITVVIDSGFMK 1932 KD SK+II+ LHS++ S EQKKVF+ PP G RKIIL+TNI+E+++TIDD+ VIDSG MK Sbjct: 585 KDGSKFIIISLHSMVPSVEQKKVFKRPPQGCRKIILSTNISESAITIDDVVYVIDSGRMK 644 Query: 1931 EKSYDPYRNVSTLHISWISKASARQREGRAGRCQPGVCYHLFSKVRAAALPEYQIPEIKR 1752 EKSYDPY NVSTL SW+SKASA+QREGRAGRCQPG+CYHL+SK+R ++LP++Q+PEIKR Sbjct: 645 EKSYDPYNNVSTLQSSWVSKASAKQREGRAGRCQPGICYHLYSKLRESSLPDFQVPEIKR 704 Query: 1751 ASLEELCLQIKLLHGDCSISDFMKKAIDPPLELSVRNAIILLQEIGAMNHEEKLTDLGRQ 1572 +EELCLQ+KLL C I F++K +DPP+ ++RNA+ +L +IGA++ +E LT+LG + Sbjct: 705 MPIEELCLQVKLLDPHCKIEAFLQKTLDPPVPETIRNAVAVLLDIGALSVDETLTELGEK 764 Query: 1571 LGSLPIHPTTSKMLLFAILMNCLDPALTIASASSYKDPFILPVMPQERKNAIAAKQEFIW 1392 +G LP+HP TSKM+ FAILMNCLDPALT+A AS Y+DPF LP++P E+K A AAK E Sbjct: 765 IGCLPVHPLTSKMIFFAILMNCLDPALTLACASDYRDPFTLPMLPNEKKRAAAAKFELAS 824 Query: 1391 THGGYSDQLAVVAAFNSWREAKNRGK---FCANYYISNATMFMIDGMRHQLWGELRQKGL 1221 +GG+SDQLAV+AAF W AKNRG+ FC+ Y+IS++TM M+ MR QL EL +KG Sbjct: 825 LYGGHSDQLAVLAAFECWNNAKNRGQEASFCSQYFISSSTMNMLQAMRKQLQRELIRKGF 884 Query: 1220 VPENLHSCSLNSQDSGILRAVLLAGFYPMVGTMLPALPSGRKAVVLTSRGEKVRVHPHST 1041 +PEN+ SC+ N+ GI+ AVL+AG YPMVG LP P K VV T+ G KVR+HP S Sbjct: 885 IPENVSSCNTNAHVPGIVHAVLVAGLYPMVGRFLP--PKNGKRVVETTSGAKVRLHPQSL 942 Query: 1040 LFKLVHFNRSQKPSSKNHLLAFDEIMRTDASTSIKSCTLVQPYALLLLATEMVVAPL--- 870 FKL + + P L+ +DEI R D I++CT++ P LLLLATE+VVAP Sbjct: 943 NFKLSFWKSNDYP-----LVIYDEITRGDGGMHIRNCTVIGPLPLLLLATEIVVAPAEND 997 Query: 869 ----------XXXXXXXXXXXXXXXXXXDVSKSLPEKTMSIPDNLVSIVVDRWLRFEATS 720 + E+ MS PDN V +VVDRWL F AT+ Sbjct: 998 DEDDEEDDDDYDSADGAESDEDGMEIHGKLGTQQGERIMSSPDNSVMVVVDRWLYFGATA 1057 Query: 719 LDAAQLYCLRERLSAAMTFKVKHPHDPLPPLLGESVYAIACLLSYDGNVDLKMPSDMDRR 540 LD AQ+YCLRE+LSAA+ FKV HPH LPP L Y AC+LS DG + +P + Sbjct: 1058 LDVAQIYCLREQLSAAILFKVTHPHKELPPALAAYTYTTACILSNDGLSGISLPGE-SVE 1116 Query: 539 EFHSQVPTA---PNTPGRMGGFTPRSKQIADSSFSSNTAKGPIRNNHQTDVPKTTGANAI 369 S V + GR G S + N+ ++NN Q P+ A + Sbjct: 1117 SLTSMVHATEIDESCSGRRG-----------ISQNPNSFLSSLKNNTQQTAPRYHNARSP 1165 Query: 368 QQKVVTQ 348 Q+ Q Sbjct: 1166 NQRPTLQ 1172