BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00007974
         (432 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit R...    69   9e-10
emb|CAN59729.1| hypothetical protein VITISV_037737 [Vitis vinifera]    68   1e-09
ref|XP_002512673.1| ubiquinol-cytochrome C reductase iron-sulfur...    67   2e-09
gb|ABR16850.1| unknown [Picea sitchensis]                              62   6e-08
ref|XP_002304638.1| ubiquinol-cytochrome C reductase iron-sulfur...    61   1e-07
ref|XP_002297879.2| ubiquinol-cytochrome C reductase iron-sulfur...    61   2e-07
gb|EPS72313.1| ubiquinol-cytochrome c reductase iron-sulfur subu...    59   7e-07
ref|XP_002276466.1| PREDICTED: cytochrome b-c1 complex subunit R...    59   7e-07
gb|EMJ23710.1| hypothetical protein PRUPE_ppa009818mg [Prunus pe...    59   9e-07
sp|P49729.1|UCRI1_TOBAC RecName: Full=Cytochrome b-c1 complex su...    58   1e-06
sp|P51134.1|UCRI4_TOBAC RecName: Full=Cytochrome b-c1 complex su...    58   1e-06
sp|P51132.1|UCRI2_TOBAC RecName: Full=Cytochrome b-c1 complex su...    57   2e-06
ref|NP_001241047.1| uncharacterized protein LOC100798615 [Glycin...    57   2e-06
gb|EXB81193.1| Cytochrome b-c1 complex subunit Rieske-2 [Morus n...    57   3e-06
ref|XP_004250690.1| PREDICTED: cytochrome b-c1 complex subunit R...    57   3e-06
ref|XP_006829630.1| hypothetical protein AMTR_s00122p00080600 [A...    56   4e-06
ref|XP_004310143.1| PREDICTED: cytochrome b-c1 complex subunit R...    55   7e-06

>ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2, mitochondrial
           [Vitis vinifera] gi|296085532|emb|CBI29264.3| unnamed
           protein product [Vitis vinifera]
          Length = 272

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 12/104 (11%)
 Frame = -3

Query: 277 MLRTIGRRLPYLRE---ISAKRSVAALNSFPAS-----SQNTEESPN--NNRF-SLYRGF 131
           MLR  GRRL  L      SA  S A L+   +S     S  +  SP+  N+ F  L RGF
Sbjct: 1   MLRVAGRRLSSLSRWSPSSAPASSALLSRIHSSNGGDGSSRSISSPHLFNSEFRDLIRGF 60

Query: 130 SSGAIAPKYG-GTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
           SS ++AP +  G  SD+ PT   L NPTSK VYD+HNHERF PG
Sbjct: 61  SSESLAPSHDLGMISDLPPTVAALKNPTSKIVYDDHNHERFPPG 104


>emb|CAN59729.1| hypothetical protein VITISV_037737 [Vitis vinifera]
          Length = 241

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 49/104 (47%), Positives = 59/104 (56%), Gaps = 12/104 (11%)
 Frame = -3

Query: 277 MLRTIGRRLPYLRE---ISAKRSVAALNSFPAS-----SQNTEESPN--NNRF-SLYRGF 131
           MLR  GRRL  L      SA  S A L+   +S     S  +  SP+  N+ F  L RGF
Sbjct: 1   MLRVAGRRLSSLSRWSPSSAPASSALLSRIHSSNGGDGSSRSIXSPHLFNSEFRDLIRGF 60

Query: 130 SSGAIAPKYG-GTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
           SS ++AP +  G  SD+ PT   L NPTSK VYD+HNHERF PG
Sbjct: 61  SSESLAPSHDLGMISDLPPTVAALKNPTSKIVYDDHNHERFPPG 104


>ref|XP_002512673.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, putative
           [Ricinus communis] gi|223548634|gb|EEF50125.1|
           ubiquinol-cytochrome C reductase iron-sulfur subunit,
           putative [Ricinus communis]
          Length = 264

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 47/96 (48%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
 Frame = -3

Query: 277 MLRTIGRRLPYLREISAKRSVAA-LNSFPASSQNTEESPNNNRFS--LYRGFSSGAIAPK 107
           MLR  GRRL      S   SV    N  P  S  +  SP+   FS  L RGFSS A+AP 
Sbjct: 1   MLRVAGRRLSSQWRTSQATSVFPHQNVLPHPSFRSILSPSRFSFSPDLIRGFSSEALAPG 60

Query: 106 YG-GTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
           +  G  SD+  T   + NPTSK VYDEHNHERF PG
Sbjct: 61  HDLGMISDLPATVAAVKNPTSKIVYDEHNHERFPPG 96


>gb|ABR16850.1| unknown [Picea sitchensis]
          Length = 245

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 16/108 (14%)
 Frame = -3

Query: 277 MLRTIGRRLPYL----REISAKRSVAALNSFPASSQNTEES------------PNNNRFS 146
           MLR +GRRLP +    R  ++  S  AL S  A   +T  S            P+     
Sbjct: 1   MLRAVGRRLPAISGLTRNTTSPSSSLALVSSDALKDDTVISSANPPQGLQLLNPSWKSHF 60

Query: 145 LYRGFSSGAIAPKYGGTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
           L+RGFS+ ++AP++    SD+  T   + NPTSK  YDE NHERF PG
Sbjct: 61  LFRGFSAESLAPRHELGFSDIPATIAAVKNPTSKIEYDESNHERFTPG 108


>ref|XP_002304638.1| ubiquinol-cytochrome C reductase iron-sulfur subunit family protein
           [Populus trichocarpa] gi|222842070|gb|EEE79617.1|
           ubiquinol-cytochrome C reductase iron-sulfur subunit
           family protein [Populus trichocarpa]
          Length = 272

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 45/104 (43%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
 Frame = -3

Query: 277 MLRTIGRRLPYLR-EISAKRSVAALNSFP--------ASSQNTEESPNNNRFS--LYRGF 131
           MLR  GRRL  L    S   S     + P        A+S  +  SP +  F+  L RGF
Sbjct: 1   MLRVAGRRLSSLPWRCSQTTSAFVSQNSPFLSDGRDSAASSRSILSPYHLSFTPDLIRGF 60

Query: 130 SSGAIAPKYG-GTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
           SSGA+ P    G  SD+  T   + NPTSK VYDEHNHER+ PG
Sbjct: 61  SSGALTPGQDMGIISDLPATVAAVKNPTSKIVYDEHNHERYPPG 104


>ref|XP_002297879.2| ubiquinol-cytochrome C reductase iron-sulfur subunit family protein
           [Populus trichocarpa] gi|550347130|gb|EEE82684.2|
           ubiquinol-cytochrome C reductase iron-sulfur subunit
           family protein [Populus trichocarpa]
          Length = 275

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 15/107 (14%)
 Frame = -3

Query: 277 MLRTIGRRL---PYLREISAKRSVAALNSFPASSQNTEESPNNNR-------FS----LY 140
           MLR  GRRL   P+    S   S     +    S +  +S  ++R       FS    L 
Sbjct: 1   MLRVAGRRLSSLPWRSSQSPTTSAFVSRNTAFVSDDGRDSAASSRPILSPYQFSFPPDLI 60

Query: 139 RGFSSGAIAPKYG-GTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
           RGFSSGA+   +  G  SD+ PT   + NPTSK VYDEHNHER+ PG
Sbjct: 61  RGFSSGALTSGHDMGIISDLPPTVAAVKNPTSKIVYDEHNHERYPPG 107


>gb|EPS72313.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Genlisea
           aurea]
          Length = 262

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 42/98 (42%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
 Frame = -3

Query: 277 MLRTIGRRLPYLREISAKRSVAALNSFPASSQNTEESPNNNRFSLY-----RGFSSGAIA 113
           MLR  GRRL       A RS     S   S        N+   S Y     RGFSSGAI 
Sbjct: 1   MLRVAGRRL----SSQAWRSGLLSRSSFLSVDRPCVERNDRSISSYLGDQIRGFSSGAIV 56

Query: 112 P-KYGGTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
           P +  G   D+  T   + NPTSK VYD+HNHER+ PG
Sbjct: 57  PGQESGLIPDIPATIAAIKNPTSKIVYDDHNHERYPPG 94


>ref|XP_002276466.1| PREDICTED: cytochrome b-c1 complex subunit Rieske, mitochondrial
           [Vitis vinifera]
          Length = 274

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 40/106 (37%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
 Frame = -3

Query: 277 MLRTIGRRLPYLREISAKRSVAALNSFPASSQ--NTEESPNNNRFS-----------LYR 137
           MLR   RRL  L   S+      + S   +S   N +E P   RFS            +R
Sbjct: 1   MLRVASRRLSSLTSSSSLWRPNQVASAVVTSNPINPDEQPKPTRFSDSFSFASQFHLPFR 60

Query: 136 GFSSGAIAPKY-GGTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
           GF+S ++ P+   G   D  PT   + NPT K VYDEHNHER+ PG
Sbjct: 61  GFASESLTPRNESGVIPDAPPTVAAVKNPTPKIVYDEHNHERYPPG 106


>gb|EMJ23710.1| hypothetical protein PRUPE_ppa009818mg [Prunus persica]
          Length = 276

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 16/108 (14%)
 Frame = -3

Query: 277 MLRTIGRRLPYLREI--SAKRSVAALN-SFPASSQNTEESPNN-----NRF-------SL 143
           MLR  GRRL        S++ + A ++ S P  + N + SP+      N+F       SL
Sbjct: 1   MLRVAGRRLSSSAVAWRSSQTTPAFVSGSHPLFNNNDDSSPDGPSRSPNQFFFHSHFPSL 60

Query: 142 YRGFSSGAIAPKYG-GTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
            RGFSS A+AP +  G  S++  T   + NP+SK VYDE+NHER+ PG
Sbjct: 61  IRGFSSEALAPGHDIGLISEIPATVAAVKNPSSKIVYDEYNHERYPPG 108


>sp|P49729.1|UCRI1_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-1,
           mitochondrial; AltName: Full=Complex III subunit 5-1;
           AltName: Full=Rieske iron-sulfur protein 1; Short=RISP1;
           AltName: Full=Ubiquinol-cytochrome c reductase
           iron-sulfur subunit 1; Flags: Precursor
           gi|170322|gb|AAA34112.1| Rieske Fe-S protein, partial
           [Nicotiana tabacum]
          Length = 258

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
 Frame = -3

Query: 232 SAKRSVAALNSFPASSQNTEESPNNNRFSLY-------RGFSSGAIAPKYG-GTTSDVLP 77
           +A  S A +++   SS +   SP +   SL        RGFSS +++P +  G   D+ P
Sbjct: 6   AAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHHTRGFSSNSVSPAHDMGLVPDLPP 65

Query: 76  TRRVLTNPTSKPVYDEHNHERFQPG 2
           T   + NPTSK VYDEHNHER+ PG
Sbjct: 66  TVAAIKNPTSKIVYDEHNHERYPPG 90


>sp|P51134.1|UCRI4_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-4,
           mitochondrial; AltName: Full=Complex III subunit 5-4;
           AltName: Full=Rieske iron-sulfur protein 4; Short=RISP4;
           AltName: Full=Ubiquinol-cytochrome c reductase
           iron-sulfur subunit 4; Flags: Precursor
           gi|530054|gb|AAA20833.1| Rieske iron-sulfur protein
           [Nicotiana tabacum]
          Length = 236

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = -3

Query: 169 SPNNNRFSLYRGFSSGAIAPKYG-GTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
           S  +N FS+  GFSS +++  +  G   D+ PT   + NPTSK VYDEHNHER+ PG
Sbjct: 12  SVTSNSFSIISGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPG 68


>sp|P51132.1|UCRI2_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-2,
           mitochondrial; AltName: Full=Complex III subunit 5-2;
           AltName: Full=Rieske iron-sulfur protein 2; Short=RISP2;
           AltName: Full=Ubiquinol-cytochrome c reductase
           iron-sulfur subunit 2; Flags: Precursor
           gi|530052|gb|AAA20831.1| Rieske iron-sulfur protein
           [Nicotiana tabacum]
          Length = 272

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
 Frame = -3

Query: 277 MLRTIGRRLPYLREISAKRSVAALNSFPA----SSQNTEESPNNNRFSLY-------RGF 131
           MLR  GRR   L     +    + ++F +    SS +   SP +   SL        RGF
Sbjct: 1   MLRIAGRRASSLSRWPVRSVAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHHTRGF 60

Query: 130 SSGAIAPKYG-GTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
           SS +++  +  G   D+ PT   + NPTSK VYDEHNHER+ PG
Sbjct: 61  SSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPG 104


>ref|NP_001241047.1| uncharacterized protein LOC100798615 [Glycine max]
           gi|255644394|gb|ACU22702.1| unknown [Glycine max]
          Length = 265

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
 Frame = -3

Query: 277 MLRTIGRRLPYLREISAKRSVAALNSFPASSQNTEES----PNNNRFSLYRGFSSGA-IA 113
           MLR   RRL  L   S  R   A ++F + +    +     P+++    +RGF++ + I 
Sbjct: 1   MLRVAARRLSSLSSSSPLRPNHAASAFLSRNDVVVDDHRSVPSSHPLLPFRGFATESLIH 60

Query: 112 PKYGGTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
           P        +LPT   + NPTSK VYD+HNHERF PG
Sbjct: 61  PIENSIIPQILPTVTAVKNPTSKIVYDDHNHERFPPG 97


>gb|EXB81193.1| Cytochrome b-c1 complex subunit Rieske-2 [Morus notabilis]
          Length = 278

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 18/110 (16%)
 Frame = -3

Query: 277 MLRTIGRRL-----PYLREISAKRSVAA--LNSFPASSQNTEESPNNNRFS--------- 146
           MLR  G+RL     P+LR +    + A+  ++  P   +++  S + + FS         
Sbjct: 1   MLRIAGKRLSSSAIPWLRPLQTTTASASSLISPNPRDDRHSSSSRSPSFFSSSFNPHALS 60

Query: 145 -LYRGFSSGAIAPKYG-GTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
              RGFS  A+ P +  G  S++  T   + NPTSK VYDEHNHER+ PG
Sbjct: 61  AFLRGFSCEALVPGHDIGAISELPATVAAVKNPTSKIVYDEHNHERYPPG 110


>ref|XP_004250690.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
           mitochondrial-like [Solanum lycopersicum]
          Length = 266

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 9/102 (8%)
 Frame = -3

Query: 280 MMLRTIGRRLPYLREISAKRSVAAL---NSFPASSQNTE-ESPNNNRFSLY----RGFSS 125
           MMLR  GRRL      SA RS ++    +SF  +  ++   SP+ +  S +    RGFSS
Sbjct: 1   MMLRVAGRRL----SSSAARSSSSFFTRSSFTVTDDSSPARSPSPSLTSSFLDQIRGFSS 56

Query: 124 GAIAPKYG-GTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
            +++P +  G  SD+  T   + NP+SK VYD+ NHER+ PG
Sbjct: 57  NSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPG 98


>ref|XP_006829630.1| hypothetical protein AMTR_s00122p00080600 [Amborella trichopoda]
           gi|548835141|gb|ERM97046.1| hypothetical protein
           AMTR_s00122p00080600 [Amborella trichopoda]
          Length = 280

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
 Frame = -3

Query: 277 MLRTIGRRLPYLREISAKRSVAALNSFPASSQNTEESPNNNR----------FSLYRGFS 128
           MLR   RR+  L         + L+  PAS    +   ++++          F + RGF+
Sbjct: 11  MLRVAARRISSLPWGVQPAMASMLSRSPASIIRPDSEAHSSKMASIPPRWAHFDMIRGFA 70

Query: 127 SGAIAPKYGGTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
           S  +AP+   +  D+  T   + NPTSK  Y+EHNHERF PG
Sbjct: 71  SETLAPRQDLSLPDLPATVAAIKNPTSKITYNEHNHERFPPG 112


>ref|XP_004310143.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-3,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 280

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 41/112 (36%), Positives = 53/112 (47%), Gaps = 20/112 (17%)
 Frame = -3

Query: 277 MLRTIGRRLPYL-----REISAKRSVAALNSFPASSQNTEESP-------------NNNR 152
           MLR  G+RL        R   A  +  + +  P S  N + S              N+  
Sbjct: 1   MLRVAGKRLSSSVGGAWRSSQAAPAFLSRSHHPLSFNNDKSSSSDIPSRSPIHSLLNSQS 60

Query: 151 FSLYRGFSSGAIAPKY--GGTTSDVLPTRRVLTNPTSKPVYDEHNHERFQPG 2
             L RGFSS A+AP +  G   SDV  T   + NP+SK VYDE+NHER+ PG
Sbjct: 61  PFLIRGFSSDALAPGHDVGSMISDVPATVAAVKNPSSKIVYDEYNHERYPPG 112