BLASTX nr result
ID: Ephedra25_contig00007930
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00007930
(561 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ05100.1| hypothetical protein PRUPE_ppa015419mg, partial [... 54 2e-13
ref|XP_002974350.1| hypothetical protein SELMODRAFT_149863 [Sela... 60 9e-13
ref|XP_001757082.1| Paf1 complex protein [Physcomitrella patens]... 60 9e-13
ref|XP_002990841.1| hypothetical protein SELMODRAFT_161156 [Sela... 60 9e-13
ref|XP_006849650.1| hypothetical protein AMTR_s00024p00227830 [A... 56 2e-12
ref|XP_004952411.1| PREDICTED: RNA polymerase-associated protein... 50 6e-11
ref|XP_006587039.1| PREDICTED: RNA polymerase-associated protein... 49 1e-10
gb|EPS64759.1| hypothetical protein M569_10012, partial [Genlise... 50 1e-10
gb|ESW10664.1| hypothetical protein PHAVU_009G228100g [Phaseolus... 49 2e-10
gb|EEC82015.1| hypothetical protein OsI_25970 [Oryza sativa Indi... 47 4e-10
ref|XP_006490821.1| PREDICTED: RNA polymerase-associated protein... 49 4e-10
ref|XP_006451561.1| hypothetical protein CICLE_v10007295mg [Citr... 49 4e-10
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein... 48 4e-10
ref|XP_002448364.1| hypothetical protein SORBIDRAFT_06g025910 [S... 48 4e-10
ref|XP_002885818.1| hypothetical protein ARALYDRAFT_480219 [Arab... 54 5e-10
gb|AAM15237.1| putative TPR repeat nuclear phosphoprotein [Arabi... 53 6e-10
ref|NP_178674.6| protein early flowering 8 [Arabidopsis thaliana... 53 6e-10
ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ... 53 6e-10
gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabi... 53 6e-10
ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein... 49 8e-10
>gb|EMJ05100.1| hypothetical protein PRUPE_ppa015419mg, partial [Prunus persica]
Length = 1003
Score = 53.5 bits (127), Expect(2) = 2e-13
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +1
Query: 328 FYALKQQGKSMDSGYG-VPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAYLRHAV 504
F+ L+++G ++ + V LFNLA EQ H A LY LIL+K+P Y DAYLR A
Sbjct: 418 FHQLEKEGHLVELPWNKVTTLFNLARLLEQLHNIETASILYRLILFKYPDYVDAYLRLAA 477
Query: 505 MSSGVSDFGKALEPVHNIL 561
++ ++F ++E V++ L
Sbjct: 478 LAKARNNFQLSIELVNDAL 496
Score = 47.4 bits (111), Expect(2) = 2e-13
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +3
Query: 111 CIQESKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMNG 281
C++ ++ +L+K EE+P + NN+ RGE+E A++ EALG GIW ++G
Sbjct: 341 CLKTARNLLKKEGEEVPIEVLNNLGVLHFERGEFELAQQTFREALG-DGIWLAFIDG 396
>ref|XP_002974350.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii]
gi|300157948|gb|EFJ24572.1| hypothetical protein
SELMODRAFT_149863 [Selaginella moellendorffii]
Length = 1041
Score = 59.7 bits (143), Expect(2) = 9e-13
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 328 FYALKQQGKSMD-SGYGVPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAYLRHAV 504
F +++QG S+D V +LFNLA EQ HE+ KA LY LIL+K PSY DAYLR A
Sbjct: 502 FQRIEEQGTSLDIPAEKVTVLFNLARLFEQLHETEKANLLYQLILFKHPSYVDAYLRLAA 561
Query: 505 MSSGVSDFGKALEPV 549
M+ ++ ++E V
Sbjct: 562 MAEARNNLSLSMELV 576
Score = 39.3 bits (90), Expect(2) = 9e-13
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +3
Query: 141 KNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMNGNFS 290
K+ E++P + NNI RGEY+ A+ A EALG G W + NFS
Sbjct: 439 KSGEKVPLGLLNNIGVLHFERGEYKLAEGAYYEALG-EGPWKEFNENNFS 487
>ref|XP_001757082.1| Paf1 complex protein [Physcomitrella patens]
gi|162691953|gb|EDQ78313.1| Paf1 complex protein
[Physcomitrella patens]
Length = 999
Score = 60.5 bits (145), Expect(2) = 9e-13
Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 313 EEERGFYALKQQGKSMD-SGYGVPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAY 489
E+ F +L+ +G S+D V +LFNLA EQ HE+ KA LY LILYK P Y DAY
Sbjct: 476 EDNELFRSLEDKGISLDIPAEKVTVLFNLARLHEQLHETGKASVLYRLILYKHPEYEDAY 535
Query: 490 LRHAVMSSGVSDFGKALEPVHNIL 561
LR +S S+ +LE V+ L
Sbjct: 536 LRLGALSLARSNISTSLELVNKAL 559
Score = 38.5 bits (88), Expect(2) = 9e-13
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = +3
Query: 84 SESIAGG*RCIQESKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIW 263
S A Q + +L+++ E +P ++ NNI + E E A++A +ALG GIW
Sbjct: 402 SSDFAAALDSFQTAHTLLKRSQEVVPLALLNNIGVLHFEKDELESARKAYKQALG-EGIW 460
Query: 264 ADIMNGNFSVN 296
+ G+ SV+
Sbjct: 461 TEYSEGHRSVD 471
>ref|XP_002990841.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii]
gi|300141402|gb|EFJ08114.1| hypothetical protein
SELMODRAFT_161156 [Selaginella moellendorffii]
Length = 973
Score = 59.7 bits (143), Expect(2) = 9e-13
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 328 FYALKQQGKSMD-SGYGVPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAYLRHAV 504
F +++QG S+D V +LFNLA EQ HE+ KA LY LIL+K PSY DAYLR A
Sbjct: 475 FQRIEEQGTSLDIPAEKVTVLFNLARLFEQLHETEKANLLYQLILFKHPSYVDAYLRLAA 534
Query: 505 MSSGVSDFGKALEPV 549
M+ ++ ++E V
Sbjct: 535 MAEARNNLSLSMELV 549
Score = 39.3 bits (90), Expect(2) = 9e-13
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +3
Query: 141 KNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMNGNFS 290
K+ E++P + NNI RGEY+ A+ A EALG G W + NFS
Sbjct: 412 KSGEKVPLGLLNNIGVLHFERGEYKLAEGAYYEALG-EGPWKEFNENNFS 460
>ref|XP_006849650.1| hypothetical protein AMTR_s00024p00227830 [Amborella trichopoda]
gi|548853225|gb|ERN11231.1| hypothetical protein
AMTR_s00024p00227830 [Amborella trichopoda]
Length = 1078
Score = 56.2 bits (134), Expect(2) = 2e-12
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 328 FYALKQQGKSMDSGYG-VPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAYLRHAV 504
F L++ G ++ + V LFN A EQ H++ KA LY LIL+KFP YGDAYLR A
Sbjct: 508 FQKLEEDGTPLELPWDKVTALFNQARLLEQLHDTEKACLLYKLILFKFPDYGDAYLRLAA 567
Query: 505 MSSGVSDFGKALEPVHNIL 561
+S ++ ++E + + L
Sbjct: 568 ISKSRNNIRMSIELIGDAL 586
Score = 42.0 bits (97), Expect(2) = 2e-12
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 114 IQESKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMNG 281
++ ++ +L+K EE+ + NNI RGE+E A + EALG GIW M+G
Sbjct: 432 LRTARGLLKKGGEEVSVELLNNIGVLHFERGEFELADQTFKEALG-EGIWLSFMDG 486
>ref|XP_004952411.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Setaria
italica]
Length = 1069
Score = 50.1 bits (118), Expect(2) = 6e-11
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 313 EEERGFYALKQQGKSMD-SGYGVPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAY 489
+++ F+ L+++G ++ V LFN A E+RH+SV+A Y I++K+P Y DAY
Sbjct: 510 KDQSFFHQLEEEGVPLELHSNKVTTLFNYARLLEERHDSVRASLFYRFIIFKYPDYIDAY 569
Query: 490 LRHAVMSSGVSDFGKALEPVHNIL 561
LR A ++ ++ ++E V + L
Sbjct: 570 LRLAAIAKQRNNAQLSIELVGDAL 593
Score = 42.7 bits (99), Expect(2) = 6e-11
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +3
Query: 114 IQESKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMNG 281
++ ++ +L+K E++P + N I +GE+E A+++ EALG G+W IM+G
Sbjct: 442 LKTARNLLKKAGEDVPVELLNGIGLLHFEKGEFEMAEQSFKEALG-DGLWVSIMDG 496
>ref|XP_006587039.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1089
Score = 49.3 bits (116), Expect(2) = 1e-10
Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +1
Query: 295 TTTY*DEEERGFYALKQQGKSMDSGYG-VPMLFNLA*TCEQRHESVKAMALYWLILYKFP 471
T+T ++ + F+ L+ G ++ + V +LFNLA EQ ++S A LY L+L+K+P
Sbjct: 496 TSTLQFKDMKLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLNDSGTASILYRLVLFKYP 555
Query: 472 SYGDAYLRHAVMSSGVSDFGKALEPVHNIL 561
Y DAYLR A ++ ++ ++E V++ L
Sbjct: 556 DYIDAYLRLAAIAKARNNILLSIELVNDAL 585
Score = 42.4 bits (98), Expect(2) = 1e-10
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +3
Query: 123 SKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMN 278
++ + +K +E+P + NNI Q RGE+E A++ EALG G+W +N
Sbjct: 435 ARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALG-DGVWLSFIN 485
>gb|EPS64759.1| hypothetical protein M569_10012, partial [Genlisea aurea]
Length = 919
Score = 50.1 bits (118), Expect(2) = 1e-10
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 313 EEERGFYALKQQGKSMD-SGYGVPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAY 489
++ + F L+++G S++ + + +LFNL EQ H + A+ LY LIL+K+P Y DA
Sbjct: 478 KDTKPFQQLEEKGFSVELPWFKLSILFNLGRVLEQMHNTELAVVLYRLILFKYPEYTDAI 537
Query: 490 LRHAVMSSGVSDFGKALEPVHNIL 561
LR A + ++ LE + N +
Sbjct: 538 LRLAAIMKARNNVQMTLEQIGNAI 561
Score = 41.6 bits (96), Expect(2) = 1e-10
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +3
Query: 84 SESIAGG*RCIQESKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIW 263
S I+ + + +++K NEEIP + NN+ A RGE E A + EALG GIW
Sbjct: 383 STDISAALEAFKTAHNLMKKGNEEIPLDLLNNMGALYFERGELELAADIFKEALG-EGIW 441
Query: 264 ADIMNGN 284
+ +
Sbjct: 442 CHFLKSD 448
>gb|ESW10664.1| hypothetical protein PHAVU_009G228100g [Phaseolus vulgaris]
Length = 1082
Score = 48.5 bits (114), Expect(2) = 2e-10
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +1
Query: 376 VPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAYLRHAVMSSGVSDFGKALEPVHN 555
V +LFNLA EQ +ES A LY LIL+K+P Y DAYLR A ++ ++ ++E V++
Sbjct: 524 VTVLFNLARLLEQLNESGTASILYRLILFKYPDYIDAYLRLAAIAKDRNNILLSIELVND 583
Query: 556 IL 561
L
Sbjct: 584 AL 585
Score = 42.4 bits (98), Expect(2) = 2e-10
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +3
Query: 123 SKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMN 278
++ + +K +E+P + NN+ Q RGE+E A++ EALG GIW +N
Sbjct: 435 ARTLFKKGGQEVPIELLNNVGVLQFERGEFELAQQTFKEALG-DGIWQSFIN 485
>gb|EEC82015.1| hypothetical protein OsI_25970 [Oryza sativa Indica Group]
Length = 1174
Score = 47.4 bits (111), Expect(2) = 4e-10
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 328 FYALKQQGKSMDSGYG-VPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAYLRHAV 504
F L+++G ++ + V LFN A E+ H++VKA Y LI++K+P Y D YLR A
Sbjct: 620 FQQLEEEGTPLELPWDKVTTLFNYARLFEELHDTVKASLFYRLIIFKYPDYIDTYLRLAA 679
Query: 505 MSSGVSDFGKALEPVHNIL 561
++ ++ ++E + + L
Sbjct: 680 IAKEKNNLQLSIELIGDAL 698
Score = 42.7 bits (99), Expect(2) = 4e-10
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Frame = +3
Query: 114 IQESKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMNG---- 281
I +++ +L+K+ E+IP + N I +GE E A+++ EALG G W I++G
Sbjct: 547 ISQARNLLKKSGEKIPIELLNGIGLLHFEKGELEMAEQSFKEALG-DGFWVSIIDGSVGS 605
Query: 282 ---NFSVNY 299
N+S+ Y
Sbjct: 606 SVVNWSIQY 614
>ref|XP_006490821.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Citrus
sinensis]
Length = 1088
Score = 48.9 bits (115), Expect(2) = 4e-10
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 328 FYALKQQGKSMDSGYG-VPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAYLRHAV 504
F+ + G ++ + V +LFNLA EQ H++V A LY LIL+K Y DAYLR A
Sbjct: 508 FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKHQDYVDAYLRLAA 567
Query: 505 MSSGVSDFGKALEPVHNIL 561
++ ++ ++E V+ L
Sbjct: 568 IAKARNNLQLSIELVNEAL 586
Score = 41.2 bits (95), Expect(2) = 4e-10
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 123 SKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMNGNFSVN 296
++ +L+K EE+P + NNI +GE+E A ++ +ALG GIW +++ N
Sbjct: 435 ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG-DGIWLTLLDSKTKTN 491
>ref|XP_006451561.1| hypothetical protein CICLE_v10007295mg [Citrus clementina]
gi|557554787|gb|ESR64801.1| hypothetical protein
CICLE_v10007295mg [Citrus clementina]
Length = 1088
Score = 48.9 bits (115), Expect(2) = 4e-10
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 328 FYALKQQGKSMDSGYG-VPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAYLRHAV 504
F+ + G ++ + V +LFNLA EQ H++V A LY LIL+K Y DAYLR A
Sbjct: 508 FHRFENDGNHVELPWNKVTVLFNLARLLEQIHDTVAASVLYRLILFKHQDYVDAYLRLAA 567
Query: 505 MSSGVSDFGKALEPVHNIL 561
++ ++ ++E V+ L
Sbjct: 568 IAKARNNLQLSIELVNEAL 586
Score = 41.2 bits (95), Expect(2) = 4e-10
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 123 SKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMNGNFSVN 296
++ +L+K EE+P + NNI +GE+E A ++ +ALG GIW +++ N
Sbjct: 435 ARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALG-DGIWLTLLDSKTKTN 491
>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1088
Score = 48.1 bits (113), Expect(2) = 4e-10
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +1
Query: 295 TTTY*DEEERGFYALKQQGKSMDSGYG-VPMLFNLA*TCEQRHESVKAMALYWLILYKFP 471
T+T ++ + F+ L+ G ++ + V +LFNLA EQ ++S A Y LIL+K+P
Sbjct: 496 TSTLQFKDMQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLYDSGTASIFYRLILFKYP 555
Query: 472 SYGDAYLRHAVMSSGVSDFGKALEPVHNIL 561
Y DAYLR A ++ ++ ++E V++ L
Sbjct: 556 DYIDAYLRLAAIAKARNNILLSIELVNDAL 585
Score = 42.0 bits (97), Expect(2) = 4e-10
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +3
Query: 132 VLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMN 278
+ +K +E+P + NNI Q RGE+E A++ EALG G+W +N
Sbjct: 438 LFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALG-DGVWLSFIN 485
>ref|XP_002448364.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor]
gi|241939547|gb|EES12692.1| hypothetical protein
SORBIDRAFT_06g025910 [Sorghum bicolor]
Length = 1069
Score = 48.1 bits (113), Expect(2) = 4e-10
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 310 DEEERGFYALKQQGKSMD-SGYGVPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDA 486
++++ F+ L+++G ++ V LFN A E+ H+SV+A Y I++K+P Y DA
Sbjct: 509 NKDQSFFHQLEEEGVPLELHSIKVTTLFNYARLLEELHDSVRASLFYRFIIFKYPDYIDA 568
Query: 487 YLRHAVMSSGVSDFGKALEPVHNIL 561
YLR A ++ ++ ++E + + L
Sbjct: 569 YLRLAAIAKQRNNVQLSIELIGDAL 593
Score = 42.0 bits (97), Expect(2) = 4e-10
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +3
Query: 114 IQESKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMNGNFS- 290
++ ++ +L+K E +P + N I +GE+E A+++ EALG G+W +M+G
Sbjct: 442 LKTARNLLKKAGEAVPVELLNGIGLLHFEKGEFEMAEQSFKEALG-DGLWVSVMDGKVGS 500
Query: 291 --VNYNV 305
VN++V
Sbjct: 501 SMVNWSV 507
>ref|XP_002885818.1| hypothetical protein ARALYDRAFT_480219 [Arabidopsis lyrata subsp.
lyrata] gi|297331658|gb|EFH62077.1| hypothetical protein
ARALYDRAFT_480219 [Arabidopsis lyrata subsp. lyrata]
Length = 1058
Score = 54.3 bits (129), Expect(2) = 5e-10
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 328 FYALKQQGKSMDSGYG-VPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAYLRHAV 504
F+ L + G S+D + V LFNLA EQ H++ A LY LIL+K+P Y DAYLR A
Sbjct: 480 FHRLIESGHSVDVPWNKVTTLFNLARLLEQLHKTEAATFLYQLILFKYPGYIDAYLRLAA 539
Query: 505 MSSGVSDFGKALEPVHNIL 561
+ ++ A+E V+ L
Sbjct: 540 SAKAQNNLPLAIELVNEAL 558
Score = 35.4 bits (80), Expect(2) = 5e-10
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +3
Query: 123 SKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMN 278
++ +++K +E+P + N+I A R E+E A + EALG GIW ++
Sbjct: 409 ARTLMKKGGQEVPIEVLNDIGALHFEREEFESALDNFKEALG-DGIWISFLD 459
>gb|AAM15237.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
Length = 1115
Score = 52.8 bits (125), Expect(2) = 6e-10
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 328 FYALKQQGKSMDSGYG-VPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAYLRHAV 504
F+ L + G S+D + V LFNLA EQ H++ A +Y LIL+K+P Y DAYLR A
Sbjct: 531 FHRLIESGHSVDVPWNKVTTLFNLARLLEQIHKTEAATFMYRLILFKYPGYIDAYLRLAA 590
Query: 505 MSSGVSDFGKALEPVHNIL 561
+ ++ A+E V+ L
Sbjct: 591 SAKAQNNLPLAIELVNEAL 609
Score = 36.6 bits (83), Expect(2) = 6e-10
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 123 SKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMN 278
++ +++K +E+P + N+I A R E+E A E EALG GIW ++
Sbjct: 460 ARTLMKKGGQEVPIEVLNDIGALHFEREEFESALENFKEALG-DGIWISFLD 510
>ref|NP_178674.6| protein early flowering 8 [Arabidopsis thaliana]
gi|207079706|tpd|FAA00428.1| TPA: VERNALIZATION
INDEPENDENCE 6 [Arabidopsis thaliana]
gi|330250911|gb|AEC06005.1| protein early flowering 8
[Arabidopsis thaliana]
Length = 1091
Score = 52.8 bits (125), Expect(2) = 6e-10
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 328 FYALKQQGKSMDSGYG-VPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAYLRHAV 504
F+ L + G S+D + V LFNLA EQ H++ A +Y LIL+K+P Y DAYLR A
Sbjct: 507 FHRLIESGHSVDVPWNKVTTLFNLARLLEQIHKTEAATFMYRLILFKYPGYIDAYLRLAA 566
Query: 505 MSSGVSDFGKALEPVHNIL 561
+ ++ A+E V+ L
Sbjct: 567 SAKAQNNLPLAIELVNEAL 585
Score = 36.6 bits (83), Expect(2) = 6e-10
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 123 SKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMN 278
++ +++K +E+P + N+I A R E+E A E EALG GIW ++
Sbjct: 436 ARTLMKKGGQEVPIEVLNDIGALHFEREEFESALENFKEALG-DGIWISFLD 486
>ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
gi|223544778|gb|EEF46294.1| tpr repeat nuclear
phosphoprotein, putative [Ricinus communis]
Length = 1065
Score = 52.8 bits (125), Expect(2) = 6e-10
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 328 FYALKQQGKSMDSGYG-VPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAYLRHAV 504
F+ L+Q G ++ + V LFNLA EQ H A LY LIL+K+P Y DAYLR A
Sbjct: 481 FHQLEQDGHRVELTWDKVTALFNLARLLEQMHNIETANVLYVLILFKYPDYVDAYLRLAA 540
Query: 505 MSSGVSDFGKALEPVHNIL 561
+S ++ ++E V+ L
Sbjct: 541 ISKARNNLQLSIELVNEAL 559
Score = 36.6 bits (83), Expect(2) = 6e-10
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 114 IQESKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMNG 281
++ ++ +L+K E+P + NNI R E E A E EA+G GIW ++G
Sbjct: 405 LKTARSLLKKGGHEVPVEVLNNIGVIYFEREELELALETFKEAVG-DGIWLAFLDG 459
>gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
Length = 740
Score = 52.8 bits (125), Expect(2) = 6e-10
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 328 FYALKQQGKSMDSGYG-VPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAYLRHAV 504
F+ L + G S+D + V LFNLA EQ H++ A +Y LIL+K+P Y DAYLR A
Sbjct: 507 FHRLIESGHSVDVPWNKVTTLFNLARLLEQIHKTEAATFMYRLILFKYPGYIDAYLRLAA 566
Query: 505 MSSGVSDFGKALEPVHNIL 561
+ ++ A+E V+ L
Sbjct: 567 SAKAQNNLPLAIELVNEAL 585
Score = 36.6 bits (83), Expect(2) = 6e-10
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 123 SKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMN 278
++ +++K +E+P + N+I A R E+E A E EALG GIW ++
Sbjct: 436 ARTLMKKGGQEVPIEVLNDIGALHFEREEFESALENFKEALG-DGIWISFLD 486
>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
product [Vitis vinifera]
Length = 1091
Score = 49.3 bits (116), Expect(2) = 8e-10
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 328 FYALKQQGKSMDSGYG-VPMLFNLA*TCEQRHESVKAMALYWLILYKFPSYGDAYLRHAV 504
F+ L++ G ++ + V +LFNLA EQ + + A LY LIL+KFP Y DAYLR A
Sbjct: 508 FHQLEEDGHFVELPWNKVTVLFNLARLLEQLNNTKTASILYRLILFKFPDYIDAYLRLAA 567
Query: 505 MSSGVSDFGKALEPVHNIL 561
++ ++ ++E V + L
Sbjct: 568 IAKARNNIQLSIELVGDAL 586
Score = 39.7 bits (91), Expect(2) = 8e-10
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +3
Query: 123 SKRVLRKNNEEIPDSIGNNICAFQLARGEYERAKEALLEALGTTGIWADIMN 278
++ +L+K EE+P + NNI RGE+E A++ EA+G GIW ++
Sbjct: 435 ARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEAVG-DGIWLSFID 485