BLASTX nr result

ID: Ephedra25_contig00007755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00007755
         (1772 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_019294047.1| hypothetical protein [Lactococcus garvieae]        59   9e-06

>ref|WP_019294047.1| hypothetical protein [Lactococcus garvieae]
          Length = 3357

 Score = 58.5 bits (140), Expect = 9e-06
 Identities = 82/383 (21%), Positives = 152/383 (39%), Gaps = 17/383 (4%)
 Frame = -2

Query: 1177 NDCTGQSSKNRTDKEIDNFYRAAQCTVITDKATTYMCNTTQLKSPVEKNS-----EPTAE 1013
            +D   +SSKN   +             ++D A+  + + +   S  E +S       +  
Sbjct: 1663 SDSISESSKNSASESTSRSESTRDS--LSDSASNSLESNSDQNSASESSSASGSLSASVS 1720

Query: 1012 FSEFASPNDSAKENNEECDYEALQ---SEEAGKMKAESTLDSICKRIDKLEGVCLRIEDY 842
             SE +S ++S+K +N +   E+L    SE       ES+ +S+   +   E +   I + 
Sbjct: 1721 SSESSSSSESSKASNSDSASESLSNSVSESLSNSAQESSSESVSGSLSVSESISGSISNS 1780

Query: 841  VCRSLSNMEKRLQLVETHLLLSGKDSSKTKEGSNVYPGVSVITSHSSPLNNTLPELVTES 662
            V  S  N +       T L  SG  S      ++     S   S S  ++N+     +ES
Sbjct: 1781 VSNSNLNSDSESVSNSTSLSESGSSSESELVSTSDSASASTSVSESQSVSNSSSS--SES 1838

Query: 661  DKLSTSVNMTRESFSNVHPVIPIQKSQLISPSENCIDRSMPSFQDTISSDKPSSAPLTNS 482
             K S+S + +  +  +V   + +  S+  S SE+       S  ++IS  +  S  ++ S
Sbjct: 1839 SKASSSDSASESN--SVSNSLSVSDSERNSDSESI----SASVSNSISQSESQSVSVSTS 1892

Query: 481  DTMGDQTQHLVDSDE----SSIEQREDTTSFDMSKNNLQSYTSLDLDPSMKDQHGKGSDN 314
            D+  +  +   DSD     SS+ +    +S + S  +    TSL    S  D +   S +
Sbjct: 1893 DSNSEPVESGSDSDSLSASSSLSESSRVSSSESSSLSASLSTSLSTSGSFSDSNSASSSD 1952

Query: 313  QDCNQL-----LAHRQSCTENHGKTLDQALVSNLSAFLETVPFSNVVTEGSCVEVPSCTL 149
                 L     L+   S +  + ++   +L ++ S+ L T    +     S     S +L
Sbjct: 1953 SSRESLSDSSSLSASTSESSRNSESNSASLSTSTSSSLSTSMSDSSSLSDSLSASISLSL 2012

Query: 148  GDQDKGEKNLNFLDSDSQSDTPS 80
               D    +++   SDS  D+ S
Sbjct: 2013 SVSDSSSHSISDSLSDSARDSIS 2035


Top