BLASTX nr result
ID: Ephedra25_contig00007560
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00007560
(430 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida] 190 1e-46
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de... 187 2e-45
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper... 186 2e-45
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa... 184 1e-44
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 182 4e-44
ref|XP_006388173.1| hypothetical protein POPTR_0303s002201g, par... 182 5e-44
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 181 9e-44
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 179 4e-43
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola... 178 6e-43
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu... 177 1e-42
emb|CBI26820.3| unnamed protein product [Vitis vinifera] 177 1e-42
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 177 1e-42
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu... 177 1e-42
gb|AAT38699.2| RNA dependent RNA polymerase family protein [Sola... 177 1e-42
ref|XP_002311535.2| hypothetical protein POPTR_0008s13520g [Popu... 176 4e-42
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr... 175 5e-42
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 175 6e-42
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall... 174 8e-42
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 174 8e-42
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 174 1e-41
>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
Length = 775
Score = 190 bits (483), Expect = 1e-46
Identities = 87/142 (61%), Positives = 112/142 (78%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
LIPP+ PM+Y P + LDHDVT+EE++E+F NYM+ND LG+I+ H VFAD EP MA
Sbjct: 508 LIPPRQVQPMDYTPAPSIQLDHDVTIEEVEEYFTNYMVNDGLGVIANAHVVFADREPNMA 567
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEKEDKPTYMSKRVIGNLYRA 69
S C++LA+LF++AVDFPKTGVPAE+PS L PKEYPDFMEK DK TY S++VIG L+R
Sbjct: 568 MSDPCIELAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEKPDKTTYHSEKVIGKLFRE 627
Query: 68 IKDYAMQSFSISSFTREVAHRT 3
+KD Q+ SI++FTR+VA R+
Sbjct: 628 VKDKTTQASSITTFTRDVARRS 649
>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 1139
Score = 187 bits (474), Expect = 2e-45
Identities = 87/142 (61%), Positives = 112/142 (78%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
+IPP+ PM Y P + LDHDVT+EE++E+F NY++ND+LGII+ H VFAD EP+MA
Sbjct: 840 MIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMA 899
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEKEDKPTYMSKRVIGNLYRA 69
S C LA+LF++AVDFPKTGVPAE+PS L PKEYPDFM+K DK TY+S+RVIG L+R
Sbjct: 900 MSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPDKTTYISERVIGKLFRK 959
Query: 68 IKDYAMQSFSISSFTREVAHRT 3
+KD A Q+ SI+ FTR+VA R+
Sbjct: 960 VKDKAPQASSIAIFTRDVARRS 981
>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
[Solanum lycopersicum]
Length = 1114
Score = 186 bits (473), Expect = 2e-45
Identities = 86/142 (60%), Positives = 113/142 (79%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
+IPP+ PM Y P + LDHDVT+EE++E+F NY++ND+LGII+ H VFAD EP+MA
Sbjct: 815 MIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMA 874
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEKEDKPTYMSKRVIGNLYRA 69
S C LA+LF++AVDFPKTGVPAE+PS L PKEYPDFM+K DK +Y+S+RVIG L+R
Sbjct: 875 MSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPDKTSYISERVIGKLFRK 934
Query: 68 IKDYAMQSFSISSFTREVAHRT 3
+KD A Q+ SI++FTR+VA R+
Sbjct: 935 VKDKAPQASSIATFTRDVARRS 956
>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
[Nicotiana glutinosa]
Length = 1117
Score = 184 bits (467), Expect = 1e-44
Identities = 84/142 (59%), Positives = 111/142 (78%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
L+PP+ PM+Y P LDHDVT+EE++E+F NY++ND+LGII+ H VFAD EP+MA
Sbjct: 818 LVPPRQFQPMDYTPAPSTQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMA 877
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEKEDKPTYMSKRVIGNLYRA 69
S C LA+LF++AVDFPKTGVPAE+PS L PKEYPDFMEK DKPTY S++VIG L++
Sbjct: 878 MSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEKPDKPTYHSEKVIGKLFQK 937
Query: 68 IKDYAMQSFSISSFTREVAHRT 3
+KD Q+ SI++FT +VA ++
Sbjct: 938 VKDKTPQASSIANFTMDVARKS 959
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 182 bits (462), Expect = 4e-44
Identities = 84/142 (59%), Positives = 111/142 (78%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
LIPP+ M+Y P LDHDVT+EE++E+F NY++ND+LGII+ H VFAD EP+MA
Sbjct: 817 LIPPRQVQSMDYTPAPTTQLDHDVTIEEVEEYFTNYIINDSLGIIANAHVVFADREPDMA 876
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEKEDKPTYMSKRVIGNLYRA 69
S C LA+LF++AVDFPKTGVPAE+PS L PKEYPDFMEK DKPTY S++VIG L++
Sbjct: 877 MSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEKPDKPTYPSEKVIGKLFQK 936
Query: 68 IKDYAMQSFSISSFTREVAHRT 3
+K+ Q+ SI++FTR+VA ++
Sbjct: 937 VKNKTPQASSIATFTRDVARKS 958
>ref|XP_006388173.1| hypothetical protein POPTR_0303s002201g, partial [Populus
trichocarpa] gi|550309641|gb|ERP47087.1| hypothetical
protein POPTR_0303s002201g, partial [Populus
trichocarpa]
Length = 642
Score = 182 bits (461), Expect = 5e-44
Identities = 90/144 (62%), Positives = 114/144 (79%), Gaps = 2/144 (1%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
LIPPQ PM+Y AP LDHDVT+EE+QE+FA+Y+LND+LGII H VFADSEP+MA
Sbjct: 342 LIPPQKFPPMDYTAPQTTILDHDVTIEEVQEYFADYLLNDSLGIICTAHVVFADSEPDMA 401
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEK-EDK-PTYMSKRVIGNLY 75
RS+ C++LA+L ++AVDFPKTGVPA++P L KEYPDFMEK DK TY+S+RV+G L+
Sbjct: 402 RSEKCIELAQLSSIAVDFPKTGVPAKIPKELRVKEYPDFMEKPADKCTTYVSQRVLGKLF 461
Query: 74 RAIKDYAMQSFSISSFTREVAHRT 3
RA+KD A + I SFT+EVA R+
Sbjct: 462 RAVKDIAPDTSPIKSFTKEVATRS 485
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 181 bits (459), Expect = 9e-44
Identities = 86/142 (60%), Positives = 108/142 (76%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
LIPPQ + PM+Y M LDHDV +E+++E+F NY++ND+LGII+ HTVFAD EP A
Sbjct: 832 LIPPQQDPPMDYTPAQSMQLDHDVQIEDVEEYFTNYIVNDSLGIIANAHTVFADREPHKA 891
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEKEDKPTYMSKRVIGNLYRA 69
RS+ CL LA+ F++AVDFPKTGVPAE+P L KEYPDFMEK DKPTY S+ VIG L+RA
Sbjct: 892 RSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRA 951
Query: 68 IKDYAMQSFSISSFTREVAHRT 3
+KD A + I FT+EVA R+
Sbjct: 952 VKDIAPHTSCIRLFTKEVARRS 973
>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
Length = 1115
Score = 179 bits (453), Expect = 4e-43
Identities = 86/143 (60%), Positives = 110/143 (76%), Gaps = 1/143 (0%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
+IPP+ M Y P + LDHDVT+EE++E+F NY++ND+LGII+ H VFAD EP+MA
Sbjct: 815 MIPPRQVQAMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMA 874
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEK-EDKPTYMSKRVIGNLYR 72
S C LA+LF++AVDFPKTGVPAE+PS L PKEYPDFM+K DK TY+S+RVIG LYR
Sbjct: 875 MSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLYR 934
Query: 71 AIKDYAMQSFSISSFTREVAHRT 3
+KD A Q+ S + FTR+VA R+
Sbjct: 935 KVKDKAPQASSTAIFTRDVARRS 957
>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
Length = 963
Score = 178 bits (452), Expect = 6e-43
Identities = 86/143 (60%), Positives = 110/143 (76%), Gaps = 1/143 (0%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
+IPP+ PM Y P + LDHDVT+EE++E+F NY++ND+LGIIS H VFAD EP+MA
Sbjct: 663 MIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGIISNAHVVFADREPDMA 722
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEK-EDKPTYMSKRVIGNLYR 72
S C LA+L ++AVDFPKTGVPAE+PS L PKEYPDFM+K DK TY+S+RVIG L+R
Sbjct: 723 MSDPCKKLAELCSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLFR 782
Query: 71 AIKDYAMQSFSISSFTREVAHRT 3
+KD A Q+ S + FTR+VA R+
Sbjct: 783 KVKDKAPQASSTAIFTRDVARRS 805
>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1065
Score = 177 bits (450), Expect = 1e-42
Identities = 86/143 (60%), Positives = 109/143 (76%), Gaps = 1/143 (0%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
+IPP+ PM Y P + LDHDVT+EE++E+F NY++ND+LGIIS H VFAD EP+MA
Sbjct: 814 MIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGIISNAHVVFADREPDMA 873
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEK-EDKPTYMSKRVIGNLYR 72
S C LA+L ++AVDFPKTGVPAE+PS PKEYPDFM+K DK TY+S+RVIG LYR
Sbjct: 874 MSDPCKKLAELCSIAVDFPKTGVPAEIPSQWRPKEYPDFMDKPPDKTTYISERVIGKLYR 933
Query: 71 AIKDYAMQSFSISSFTREVAHRT 3
+KD A Q+ S + FTR+VA R+
Sbjct: 934 KVKDKAPQASSTAIFTRDVARRS 956
>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
Length = 919
Score = 177 bits (449), Expect = 1e-42
Identities = 84/142 (59%), Positives = 107/142 (75%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
LIPPQ +PM+Y P LDHDV +EE++E+F NY++ND+LGII+ HTVFAD E + A
Sbjct: 616 LIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKA 675
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEKEDKPTYMSKRVIGNLYRA 69
C +LAKLF++AVDFPKTGVPAE+P L KEYPDFMEK DKPTY S+ VIG L+R
Sbjct: 676 YCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFRE 735
Query: 68 IKDYAMQSFSISSFTREVAHRT 3
+KD A + +I SFTR+VA ++
Sbjct: 736 VKDIAPHNCNIRSFTRDVARQS 757
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 177 bits (449), Expect = 1e-42
Identities = 84/142 (59%), Positives = 107/142 (75%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
LIPPQ +PM+Y P LDHDV +EE++E+F NY++ND+LGII+ HTVFAD E + A
Sbjct: 818 LIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKA 877
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEKEDKPTYMSKRVIGNLYRA 69
C +LAKLF++AVDFPKTGVPAE+P L KEYPDFMEK DKPTY S+ VIG L+R
Sbjct: 878 YCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFRE 937
Query: 68 IKDYAMQSFSISSFTREVAHRT 3
+KD A + +I SFTR+VA ++
Sbjct: 938 VKDIAPHNCNIRSFTRDVARQS 959
>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1115
Score = 177 bits (449), Expect = 1e-42
Identities = 85/143 (59%), Positives = 111/143 (77%), Gaps = 1/143 (0%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
+IPP+ M Y P + LDH+VT+EE++E+F NY++ND+LGII+ H VFAD EP+MA
Sbjct: 815 MIPPRQVQAMEYPPAPSIQLDHNVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMA 874
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEK-EDKPTYMSKRVIGNLYR 72
S C LA+LF++AVDFPKTGVPAE+PS L PKEYPDFM+K DK TY+S+RVIG L+R
Sbjct: 875 MSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLFR 934
Query: 71 AIKDYAMQSFSISSFTREVAHRT 3
+KD A Q+ SI+ FTR+VA R+
Sbjct: 935 KVKDKAPQASSIAIFTRDVARRS 957
>gb|AAT38699.2| RNA dependent RNA polymerase family protein [Solanum demissum]
Length = 963
Score = 177 bits (449), Expect = 1e-42
Identities = 85/143 (59%), Positives = 111/143 (77%), Gaps = 1/143 (0%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
+IPP+ M Y P + LDH+VT+EE++E+F NY++ND+LGII+ H VFAD EP+MA
Sbjct: 663 MIPPRQVQAMEYPPAPSIQLDHNVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMA 722
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEK-EDKPTYMSKRVIGNLYR 72
S C LA+LF++AVDFPKTGVPAE+PS L PKEYPDFM+K DK TY+S+RVIG L+R
Sbjct: 723 MSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLFR 782
Query: 71 AIKDYAMQSFSISSFTREVAHRT 3
+KD A Q+ SI+ FTR+VA R+
Sbjct: 783 KVKDKAPQASSIAIFTRDVARRS 805
>ref|XP_002311535.2| hypothetical protein POPTR_0008s13520g [Populus trichocarpa]
gi|550332995|gb|EEE88902.2| hypothetical protein
POPTR_0008s13520g [Populus trichocarpa]
Length = 1139
Score = 176 bits (445), Expect = 4e-42
Identities = 84/143 (58%), Positives = 110/143 (76%), Gaps = 1/143 (0%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
LIPP+ PM+Y A P LDHDVT+EE+QE+F +Y+LND+LGII HTVFAD +P MA
Sbjct: 837 LIPPRTFPPMDYTAAPTTILDHDVTIEEVQEYFTDYLLNDSLGIICNAHTVFADRDPLMA 896
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEK-EDKPTYMSKRVIGNLYR 72
RSK C++LA+L ++AVDFPKTGVPA++P L KEYPDFMEK DK TY S+RV+G L+R
Sbjct: 897 RSKECIELARLSSIAVDFPKTGVPAKIPRELRVKEYPDFMEKAADKRTYESQRVLGKLFR 956
Query: 71 AIKDYAMQSFSISSFTREVAHRT 3
++D A + + SFT+E+A R+
Sbjct: 957 DVRDIAPDTSPVRSFTKEMARRS 979
>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
gi|557094740|gb|ESQ35322.1| hypothetical protein
EUTSA_v10006629mg [Eutrema salsugineum]
Length = 1108
Score = 175 bits (444), Expect = 5e-42
Identities = 84/142 (59%), Positives = 104/142 (73%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
LIPP+ PM+Y P LDHDVT+EEI+E+F NY++ND+LGII+ HT FAD EP A
Sbjct: 810 LIPPETSEPMDYTPEPAQILDHDVTIEEIEEYFTNYIVNDSLGIIANAHTAFADKEPLKA 869
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEKEDKPTYMSKRVIGNLYRA 69
S C++LA+ F++AVDFPKTGV AE+P L KEYPDFMEK DKPTY SK VIG L+R
Sbjct: 870 FSDPCIELARKFSIAVDFPKTGVAAEIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFRE 929
Query: 68 IKDYAMQSFSISSFTREVAHRT 3
+K+ A SI SFT +VA +T
Sbjct: 930 VKERAPPLISIKSFTLDVASKT 951
>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
vesca]
Length = 1119
Score = 175 bits (443), Expect = 6e-42
Identities = 84/139 (60%), Positives = 106/139 (76%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
LIPP+ PM+Y P + +D DVT+EE++E+F NY++ND+LGII+ HTVFADS+ + A
Sbjct: 817 LIPPKQIQPMDYTPAPPIEMDQDVTIEEVEEYFVNYIVNDSLGIIANAHTVFADSKLDKA 876
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEKEDKPTYMSKRVIGNLYRA 69
S CL LAKLF++AVDFPKTGVPAE+P L KEYPDFMEK DK TY+S VIG L+R
Sbjct: 877 MSHPCLQLAKLFSIAVDFPKTGVPAEIPPELYAKEYPDFMEKPDKRTYISHNVIGQLFRE 936
Query: 68 IKDYAMQSFSISSFTREVA 12
+KD A SI+SFTR+VA
Sbjct: 937 VKDIAPHDSSIASFTRQVA 955
>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
Length = 1107
Score = 174 bits (442), Expect = 8e-42
Identities = 83/139 (59%), Positives = 104/139 (74%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
LIPP+ PM+Y P LDHDVT+EE++E+FANY++ND+LGII+ HT FAD EP A
Sbjct: 812 LIPPRTSEPMDYTPEPAQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKA 871
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEKEDKPTYMSKRVIGNLYRA 69
S C++LA+ F++AVDFPKTGV AE+P L+ KEYPDFMEK DKPTY SK VIG L+R
Sbjct: 872 FSDPCIELARKFSVAVDFPKTGVAAEIPQHLHVKEYPDFMEKPDKPTYESKNVIGKLFRE 931
Query: 68 IKDYAMQSFSISSFTREVA 12
+K+ A SI SFT +VA
Sbjct: 932 VKERAPPLISIKSFTLDVA 950
>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
1 [Arabidopsis lyrata subsp. lyrata]
Length = 1097
Score = 174 bits (442), Expect = 8e-42
Identities = 83/139 (59%), Positives = 104/139 (74%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
LIPP+ PM+Y P LDHDVT+EE++E+FANY++ND+LGII+ HT FAD EP A
Sbjct: 802 LIPPRTSEPMDYTPEPAQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKA 861
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEKEDKPTYMSKRVIGNLYRA 69
S C++LA+ F++AVDFPKTGV AE+P L+ KEYPDFMEK DKPTY SK VIG L+R
Sbjct: 862 FSDPCIELARKFSVAVDFPKTGVAAEIPQHLHVKEYPDFMEKPDKPTYESKNVIGKLFRE 921
Query: 68 IKDYAMQSFSISSFTREVA 12
+K+ A SI SFT +VA
Sbjct: 922 VKERAPPLISIKSFTLDVA 940
>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
tuberosum]
Length = 1115
Score = 174 bits (440), Expect = 1e-41
Identities = 84/143 (58%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
Frame = -3
Query: 428 LIPPQVESPMNYFAPPEMALDHDVTVEEIQEFFANYMLNDALGIISARHTVFADSEPEMA 249
+IPP+ M Y P + LDHDVT+EE++E+F NY++ND+LGII+ H VFAD EP+MA
Sbjct: 815 MIPPRQVQAMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMA 874
Query: 248 RSKSCLDLAKLFTLAVDFPKTGVPAEVPSTLNPKEYPDFMEK-EDKPTYMSKRVIGNLYR 72
S C LA+L ++AVDFPKTGVPAE+P L PKEYPDFM+K DK TY+S+RVIG LYR
Sbjct: 875 MSDPCKKLAELCSIAVDFPKTGVPAEIPPQLRPKEYPDFMDKPPDKTTYISERVIGKLYR 934
Query: 71 AIKDYAMQSFSISSFTREVAHRT 3
+KD A Q+ S + FTR+VA R+
Sbjct: 935 KVKDKAPQASSTAIFTRDVARRS 957