BLASTX nr result
ID: Ephedra25_contig00005906
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00005906
(1040 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006470297.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 72 3e-10
ref|XP_006446540.1| hypothetical protein CICLE_v10014449mg [Citr... 71 6e-10
ref|XP_004252209.1| PREDICTED: ATP-dependent RNA helicase-like p... 70 1e-09
gb|AAF04377.1|AF188678_1 P72 DEAD box protein [Pisum sativum] 70 1e-09
ref|XP_002324002.1| hypothetical protein POPTR_0017s10760g [Popu... 70 1e-09
ref|XP_001760431.1| predicted protein [Physcomitrella patens] gi... 70 1e-09
ref|XP_002300045.2| hypothetical protein POPTR_0001s35150g [Popu... 70 2e-09
ref|XP_004304637.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 69 2e-09
ref|XP_004968952.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 69 3e-09
ref|XP_004968951.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 69 3e-09
ref|XP_004232310.1| PREDICTED: ATP-dependent RNA helicase-like p... 69 3e-09
ref|XP_004232309.1| PREDICTED: ATP-dependent RNA helicase-like p... 69 3e-09
ref|XP_003565397.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 69 3e-09
ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicag... 69 3e-09
ref|XP_003618185.1| DEAD-box ATP-dependent RNA helicase [Medicag... 69 3e-09
gb|EOY02439.1| DEAD-box ATP-dependent RNA helicase 46 isoform 2 ... 69 4e-09
gb|EOY02438.1| DEAD-box ATP-dependent RNA helicase 46 isoform 1 ... 69 4e-09
ref|XP_004489252.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 69 4e-09
gb|EEC70022.1| hypothetical protein OsI_00586 [Oryza sativa Indi... 69 4e-09
ref|NP_001042151.1| Os01g0172200 [Oryza sativa Japonica Group] g... 69 4e-09
>ref|XP_006470297.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Citrus
sinensis]
Length = 703
Score = 72.4 bits (176), Expect = 3e-10
Identities = 52/138 (37%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPGYFMKXXXXXXXXX 180
GRAGATGVA+TF DQDS+++++LIK+LE A+Q++P+ELRD+ASR G +
Sbjct: 510 GRAGATGVAYTFFGDQDSRYASDLIKLLEGAKQQVPRELRDMASRGGGMGRPRRWAPTSS 569
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXNGGSFGRNAAPYDSKNDYAETWNTDYS--YNGKRSR 354
GG GR + ++ D+ Y+ Y G RS
Sbjct: 570 GRDGGRGGRNDLGY-----------GGRGGRGFSGSSNRGDHDSRDRARYNDGYRG-RSS 617
Query: 355 SRSPDKYPYKR-TSPRRS 405
SRSPD+ P R SP RS
Sbjct: 618 SRSPDRAPSGRGRSPVRS 635
>ref|XP_006446540.1| hypothetical protein CICLE_v10014449mg [Citrus clementina]
gi|557549151|gb|ESR59780.1| hypothetical protein
CICLE_v10014449mg [Citrus clementina]
Length = 703
Score = 71.2 bits (173), Expect = 6e-10
Identities = 50/137 (36%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPGYFMKXXXXXXXXX 180
GRAGATGVA+TF DQDS+++++LIK+LE A+Q++P+ELRD+ASR G +
Sbjct: 510 GRAGATGVAYTFFGDQDSRYASDLIKLLEGAKQQVPRELRDMASRGGGMGRPRRWAPTSS 569
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXNGGSFGRNAAPYDSKNDYAETWNTDYSYNGK-RSRS 357
GG GR + ++ D+ Y+ + RS S
Sbjct: 570 GRDGGRGGRNDSGY-----------GGRGGRGFSGSSNRGDHDSRDRARYNDGHRGRSSS 618
Query: 358 RSPDKYPYKR-TSPRRS 405
RSPD+ P R SP RS
Sbjct: 619 RSPDRAPSGRGRSPVRS 635
>ref|XP_004252209.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10-like
[Solanum lycopersicum]
Length = 612
Score = 70.1 bits (170), Expect = 1e-09
Identities = 49/146 (33%), Positives = 62/146 (42%), Gaps = 22/146 (15%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPGYFMKXXXXXXXXX 180
GRAGA+G+A+TF +DQD+KH+ +L+K+LE A Q +P ELRD+ SR G K
Sbjct: 482 GRAGASGLAYTFFSDQDAKHALDLVKVLEGANQSVPTELRDMVSRGGGMGK--------- 532
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXNGGSFGRNAAPYDSKNDYAETWNTDYSYNG------ 342
GG GR Y S+N WN S G
Sbjct: 533 ------------------ARWGSGQGGRGGRFNGSYVSRNGGRGDWNNSSSERGGGRGYD 574
Query: 343 ----------------KRSRSRSPDK 372
KRSRSRSP+K
Sbjct: 575 RGSRDSDRFLRGDASRKRSRSRSPNK 600
>gb|AAF04377.1|AF188678_1 P72 DEAD box protein [Pisum sativum]
Length = 716
Score = 70.1 bits (170), Expect = 1e-09
Identities = 32/47 (68%), Positives = 41/47 (87%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPG 141
GRAGATG+A+TF DQD+KH+++LIKILE A QK+P ELR+L+SR G
Sbjct: 488 GRAGATGIAYTFFGDQDAKHASDLIKILEGANQKVPPELRELSSRGG 534
>ref|XP_002324002.1| hypothetical protein POPTR_0017s10760g [Populus trichocarpa]
gi|222867004|gb|EEF04135.1| hypothetical protein
POPTR_0017s10760g [Populus trichocarpa]
Length = 726
Score = 70.1 bits (170), Expect = 1e-09
Identities = 50/141 (35%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPGYFMKXXXXXXXXX 180
GRAGATGVA+TF DQD+K++++LIK+LE A Q +P E+R +ASR G M
Sbjct: 490 GRAGATGVAYTFFGDQDAKYASDLIKVLEGANQLVPPEIRAMASRGGGVM---------- 539
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXNGGSFGRNAAPYDSKNDYAETW------NTDYSYNG 342
+GG G + Y ++ +W + S N
Sbjct: 540 -----------GRFRRWGSGSGGRDGGRGGHSDFGYGGRDGGRGSWGGSGWGDHSKSLNR 588
Query: 343 KRSRSRSPDKYPYKRTSPRRS 405
RSRSRSPD+ Y R P RS
Sbjct: 589 DRSRSRSPDR--YDRAPPVRS 607
>ref|XP_001760431.1| predicted protein [Physcomitrella patens]
gi|162688445|gb|EDQ74822.1| predicted protein
[Physcomitrella patens]
Length = 675
Score = 70.1 bits (170), Expect = 1e-09
Identities = 32/51 (62%), Positives = 42/51 (82%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPGYFMK 153
GRAGATG+A+TF ++QD K++ ELIK+LE A QK+PQEL+D+ASR G K
Sbjct: 491 GRAGATGLAYTFFSEQDGKYAKELIKVLEGANQKVPQELKDIASRGGGMFK 541
>ref|XP_002300045.2| hypothetical protein POPTR_0001s35150g [Populus trichocarpa]
gi|550348924|gb|EEE84850.2| hypothetical protein
POPTR_0001s35150g [Populus trichocarpa]
Length = 793
Score = 69.7 bits (169), Expect = 2e-09
Identities = 31/47 (65%), Positives = 41/47 (87%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPG 141
GRAGATGVA+TF DQD+KH+++LIK+LE A Q++P E+RD+ASR G
Sbjct: 501 GRAGATGVAYTFFGDQDAKHASDLIKVLEGANQQVPPEIRDMASRGG 547
>ref|XP_004304637.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Fragaria
vesca subsp. vesca]
Length = 678
Score = 69.3 bits (168), Expect = 2e-09
Identities = 48/130 (36%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPGYFMKXXXXXXXXX 180
GRAGATG+A+TF DQD+K++ ELIK+LE A Q++P E+RDLASR G +
Sbjct: 504 GRAGATGLAYTFFGDQDAKYAAELIKVLEGANQRVPPEIRDLASRGGGMNR-------FR 556
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXNGGSFGR--NAAPYDSKNDYAETWNTDYSYNGK--- 345
GG FG +A YD + SY+GK
Sbjct: 557 RWGSGSGGRDGGRSDSSYGGRDGGRGGGFGSSFSAGRYDR--------GPNNSYDGKGLT 608
Query: 346 RSRSRSPDKY 375
R RSRSP+++
Sbjct: 609 RERSRSPERF 618
>ref|XP_004968952.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like isoform X2
[Setaria italica]
Length = 673
Score = 68.9 bits (167), Expect = 3e-09
Identities = 32/47 (68%), Positives = 40/47 (85%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPG 141
GRAGATGVA+TF DQDSK++ +LIKILE A QK+P++L D+ASR G
Sbjct: 352 GRAGATGVAYTFFCDQDSKYAADLIKILEGANQKVPRDLEDMASRGG 398
>ref|XP_004968951.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like isoform X1
[Setaria italica]
Length = 806
Score = 68.9 bits (167), Expect = 3e-09
Identities = 32/47 (68%), Positives = 40/47 (85%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPG 141
GRAGATGVA+TF DQDSK++ +LIKILE A QK+P++L D+ASR G
Sbjct: 485 GRAGATGVAYTFFCDQDSKYAADLIKILEGANQKVPRDLEDMASRGG 531
>ref|XP_004232310.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10-like
isoform 2 [Solanum lycopersicum]
Length = 683
Score = 68.9 bits (167), Expect = 3e-09
Identities = 31/47 (65%), Positives = 40/47 (85%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPG 141
GRAGATG A+TF DQD+KH+++LIK+LE A Q++P ELRD+ASR G
Sbjct: 466 GRAGATGEAYTFFVDQDAKHASDLIKVLEGANQQVPTELRDMASRGG 512
>ref|XP_004232309.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10-like
isoform 1 [Solanum lycopersicum]
Length = 706
Score = 68.9 bits (167), Expect = 3e-09
Identities = 31/47 (65%), Positives = 40/47 (85%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPG 141
GRAGATG A+TF DQD+KH+++LIK+LE A Q++P ELRD+ASR G
Sbjct: 489 GRAGATGEAYTFFVDQDAKHASDLIKVLEGANQQVPTELRDMASRGG 535
>ref|XP_003565397.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like
[Brachypodium distachyon]
Length = 655
Score = 68.9 bits (167), Expect = 3e-09
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPGY 144
GRAGATG+A+TF DQDSK++++L+KILE A Q + Q+LRD+ASR GY
Sbjct: 491 GRAGATGLAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDMASRGGY 538
>ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493201|gb|AES74404.1| DEAD-box ATP-dependent RNA
helicase [Medicago truncatula]
Length = 619
Score = 68.9 bits (167), Expect = 3e-09
Identities = 31/47 (65%), Positives = 41/47 (87%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPG 141
GRAGATG+A+TF DQD+KH+++LIKILE A Q++P ELR+L+SR G
Sbjct: 500 GRAGATGIAYTFFGDQDAKHASDLIKILEGANQRVPPELRELSSRGG 546
>ref|XP_003618185.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493200|gb|AES74403.1| DEAD-box ATP-dependent RNA
helicase [Medicago truncatula]
Length = 718
Score = 68.9 bits (167), Expect = 3e-09
Identities = 31/47 (65%), Positives = 41/47 (87%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPG 141
GRAGATG+A+TF DQD+KH+++LIKILE A Q++P ELR+L+SR G
Sbjct: 500 GRAGATGIAYTFFGDQDAKHASDLIKILEGANQRVPPELRELSSRGG 546
>gb|EOY02439.1| DEAD-box ATP-dependent RNA helicase 46 isoform 2 [Theobroma cacao]
Length = 772
Score = 68.6 bits (166), Expect = 4e-09
Identities = 31/47 (65%), Positives = 41/47 (87%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPG 141
GRAGATG+A+TF DQDSK++++LIK+LE A Q++P ELRD+ASR G
Sbjct: 505 GRAGATGLAYTFFGDQDSKYASDLIKVLEGANQRVPAELRDMASRGG 551
>gb|EOY02438.1| DEAD-box ATP-dependent RNA helicase 46 isoform 1 [Theobroma cacao]
Length = 771
Score = 68.6 bits (166), Expect = 4e-09
Identities = 31/47 (65%), Positives = 41/47 (87%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPG 141
GRAGATG+A+TF DQDSK++++LIK+LE A Q++P ELRD+ASR G
Sbjct: 505 GRAGATGLAYTFFGDQDSKYASDLIKVLEGANQRVPAELRDMASRGG 551
>ref|XP_004489252.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Cicer
arietinum]
Length = 618
Score = 68.6 bits (166), Expect = 4e-09
Identities = 30/49 (61%), Positives = 42/49 (85%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPGYF 147
GRAGATG+A+TF DQD+KH+++LIK+LE A Q++P ELR+++SR G F
Sbjct: 508 GRAGATGIAYTFFGDQDAKHASDLIKLLEGANQRVPPELREMSSRGGGF 556
>gb|EEC70022.1| hypothetical protein OsI_00586 [Oryza sativa Indica Group]
Length = 754
Score = 68.6 bits (166), Expect = 4e-09
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPGY 144
GRAGATGVA+TF DQDSK++++L+KILE A Q + Q+LRD+ SR GY
Sbjct: 563 GRAGATGVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDMVSRGGY 610
>ref|NP_001042151.1| Os01g0172200 [Oryza sativa Japonica Group]
gi|55296347|dbj|BAD68263.1| putative p68 RNA helicase
[Oryza sativa Japonica Group]
gi|113531682|dbj|BAF04065.1| Os01g0172200 [Oryza sativa
Japonica Group] gi|215713416|dbj|BAG94553.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 759
Score = 68.6 bits (166), Expect = 4e-09
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = +1
Query: 1 GRAGATGVAHTFITDQDSKHSTELIKILERAEQKIPQELRDLASRPGY 144
GRAGATGVA+TF DQDSK++++L+KILE A Q + Q+LRD+ SR GY
Sbjct: 567 GRAGATGVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDMVSRGGY 614