BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00005863
         (782 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849123.1| hypothetical protein AMTR_s00027p00053690 [A...   243   5e-62
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   241   3e-61
ref|XP_001769684.1| predicted protein [Physcomitrella patens] gi...   240   3e-61
ref|NP_001065077.1| Os10g0518900 [Oryza sativa Japonica Group] g...   239   6e-61
gb|EEE51275.1| hypothetical protein OsJ_32175 [Oryza sativa Japo...   239   6e-61
gb|EEC67317.1| hypothetical protein OsI_34337 [Oryza sativa Indi...   239   6e-61
ref|XP_001769682.1| predicted protein [Physcomitrella patens] gi...   239   6e-61
gb|AAG13428.1|AC051634_9 putative nucleotide repair protein [Ory...   239   6e-61
ref|XP_006662516.1| PREDICTED: DNA excision repair protein ERCC-...   239   8e-61
ref|XP_004302450.1| PREDICTED: DNA excision repair protein ERCC-...   238   1e-60
ref|XP_004982591.1| PREDICTED: DNA excision repair protein ERCC-...   238   2e-60
gb|EMJ06496.1| hypothetical protein PRUPE_ppa006720mg [Prunus pe...   238   2e-60
ref|XP_004495745.1| PREDICTED: DNA excision repair protein ERCC-...   237   4e-60
ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   237   4e-60
ref|NP_001131279.1| uncharacterized protein LOC100192592 [Zea ma...   237   4e-60
gb|ACG48134.1| mating-type switching protein swi10 [Zea mays]         236   7e-60
ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago...   234   2e-59
ref|XP_004235989.1| PREDICTED: DNA excision repair protein ERCC-...   233   7e-59
ref|XP_002464363.1| hypothetical protein SORBIDRAFT_01g016980 [S...   232   9e-59
ref|XP_006298222.1| hypothetical protein CARUB_v10014280mg [Caps...   230   4e-58

>ref|XP_006849123.1| hypothetical protein AMTR_s00027p00053690 [Amborella trichopoda]
           gi|548852610|gb|ERN10704.1| hypothetical protein
           AMTR_s00027p00053690 [Amborella trichopoda]
          Length = 390

 Score =  243 bits (620), Expect = 5e-62
 Identities = 120/210 (57%), Positives = 153/210 (72%), Gaps = 2/210 (0%)
 Frame = +2

Query: 158 QKKICVQIPSVQDVLENNQSQSLPSLFRPSANSEPEDPKTFSQAFSFVKKTEFYXXXXXX 337
           Q++  ++IPS Q+V E ++ Q  PSLFRPS++S    P  FS+AFSF+K +EFY      
Sbjct: 9   QQRSFIKIPSYQEVFEASKPQPPPSLFRPSSSSPSLPP--FSEAFSFIKNSEFYTPPPAP 66

Query: 338 XXXXXXXXXXXXXQLVSRQGKFPPASAPV--GRNGIVVGQRQQGNPLLKYIKNVRWTYGD 511
                        Q+ S       +S+P   G N ++V +RQQGNPLLK+I+N RW + D
Sbjct: 67  TVSENTPR-----QIASAGPSSSSSSSPSVQGCNAVLVSRRQQGNPLLKHIRNARWMFAD 121

Query: 512 IVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRIILCHVDVDDVVKPLHEV 691
           IVPDY LGQ +CALY+SLRYHLLHPDY+YYRIRELQK++RLR++LCHVD++DVVKPL EV
Sbjct: 122 IVPDYQLGQTSCALYLSLRYHLLHPDYLYYRIRELQKNFRLRVVLCHVDLEDVVKPLLEV 181

Query: 692 IRTAVLHDCTLICGWSLQECARYLETIKAY 781
            RTA+LHDCTL+CGWSL+EC RYLETIK Y
Sbjct: 182 TRTALLHDCTLLCGWSLEECGRYLETIKVY 211


>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
           communis] gi|223548305|gb|EEF49796.1| excision repair
           cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  241 bits (614), Expect = 3e-61
 Identities = 118/215 (54%), Positives = 150/215 (69%)
 Frame = +2

Query: 137 RGDEAPMQKKICVQIPSVQDVLENNQSQSLPSLFRPSANSEPEDPKTFSQAFSFVKKTEF 316
           R +     KK+ +QIPS Q+V+E++Q+    SLF+PS        +TFSQAFSF+K +EF
Sbjct: 12  RSNRKSNAKKVVIQIPSYQEVIESSQNPKTESLFKPS--------QTFSQAFSFIKDSEF 63

Query: 317 YXXXXXXXXXXXXXXXXXXXQLVSRQGKFPPASAPVGRNGIVVGQRQQGNPLLKYIKNVR 496
           Y                   Q V    +    +    RN I+V  RQ+GNPLLK+I+NVR
Sbjct: 64  YTPPPQSSAVSNNANSIQTTQSVPSPSQSVALTGNY-RNSILVSHRQKGNPLLKHIRNVR 122

Query: 497 WTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRIILCHVDVDDVVK 676
           W + D+V DYLLGQN C+LY+SLRYHLLHPDY+YYRIRELQK+Y+LR++LCHVDV+DVVK
Sbjct: 123 WAFADVVCDYLLGQNCCSLYLSLRYHLLHPDYLYYRIRELQKNYKLRVVLCHVDVEDVVK 182

Query: 677 PLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           PL EV +TA+LHDCTL+C WSL+EC RYLETIK Y
Sbjct: 183 PLLEVTKTALLHDCTLLCAWSLEECGRYLETIKMY 217


>ref|XP_001769684.1| predicted protein [Physcomitrella patens]
           gi|162679033|gb|EDQ65485.1| predicted protein
           [Physcomitrella patens]
          Length = 285

 Score =  240 bits (613), Expect = 3e-61
 Identities = 117/209 (55%), Positives = 150/209 (71%), Gaps = 3/209 (1%)
 Frame = +2

Query: 164 KICVQIPSVQDVLENNQSQSLPSLFRPSANSEPEDPKTFSQAFSFVKKTEFYXXXXXXXX 343
           K  + IPS  +VLE ++ Q+ PS FRPS+++ P        AFSFV++TEFY        
Sbjct: 2   KSFLHIPSHAEVLERSRPQAPPSFFRPSSSAAPP-------AFSFVRQTEFYTPPPAAPT 54

Query: 344 XXXXXXXXXXXQ---LVSRQGKFPPASAPVGRNGIVVGQRQQGNPLLKYIKNVRWTYGDI 514
                          + SR  +  P      RN I+V +RQ GNP+LKYI+NVRW +GDI
Sbjct: 55  PTVPVAPSEGVPGNGVGSRSQEALPTVNSQARNAILVNRRQTGNPVLKYIRNVRWVFGDI 114

Query: 515 VPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRIILCHVDVDDVVKPLHEVI 694
           VPDYLLGQ+TCALYISLRYHLLHPDY+Y+RIRELQK +RLR++LCHVD++DV+KPLHEVI
Sbjct: 115 VPDYLLGQSTCALYISLRYHLLHPDYLYFRIRELQKGFRLRVVLCHVDLEDVIKPLHEVI 174

Query: 695 RTAVLHDCTLICGWSLQECARYLETIKAY 781
           +T++LHDC+L+C WSL+ECARYLET+K Y
Sbjct: 175 KTSLLHDCSLLCAWSLEECARYLETLKTY 203


>ref|NP_001065077.1| Os10g0518900 [Oryza sativa Japonica Group]
           gi|78708916|gb|ABB47891.1| DNA excision repair protein
           ERCC-1, putative, expressed [Oryza sativa Japonica
           Group] gi|113639686|dbj|BAF26991.1| Os10g0518900 [Oryza
           sativa Japonica Group] gi|215697952|dbj|BAG92132.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 387

 Score =  239 bits (611), Expect = 6e-61
 Identities = 120/220 (54%), Positives = 151/220 (68%), Gaps = 4/220 (1%)
 Frame = +2

Query: 134 GRGDEAPMQKKICVQIPSVQDVLENNQSQSL-PSLFRP---SANSEPEDPKTFSQAFSFV 301
           GR    P   K  ++IPS Q+V  +  S S  P  + P   +A S      +FSQAFSF+
Sbjct: 12  GRRRRQPEPGKNLIKIPSYQEVFGSGASSSAAPPSYNPPPTTAASSSSSSSSFSQAFSFL 71

Query: 302 KKTEFYXXXXXXXXXXXXXXXXXXXQLVSRQGKFPPASAPVGRNGIVVGQRQQGNPLLKY 481
           K TEFY                   Q  + +     ++A   +N I+V  RQ+GNPLLK+
Sbjct: 72  KSTEFYSPPPPPP------------QTTTPRPPQASSAAQAPKNAILVSHRQKGNPLLKH 119

Query: 482 IKNVRWTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRIILCHVDV 661
           I+N RWTY DIVPDY+LGQ++CALYISLRYHLLHPDY+YYRIRELQK+++LR+ILCH+DV
Sbjct: 120 IRNARWTYADIVPDYVLGQSSCALYISLRYHLLHPDYLYYRIRELQKNFKLRVILCHIDV 179

Query: 662 DDVVKPLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           +DVVKPLHEV RT++LHDCTL+CGWSL+EC RYLETIK Y
Sbjct: 180 EDVVKPLHEVTRTSLLHDCTLLCGWSLEECGRYLETIKVY 219


>gb|EEE51275.1| hypothetical protein OsJ_32175 [Oryza sativa Japonica Group]
          Length = 430

 Score =  239 bits (611), Expect = 6e-61
 Identities = 120/220 (54%), Positives = 151/220 (68%), Gaps = 4/220 (1%)
 Frame = +2

Query: 134 GRGDEAPMQKKICVQIPSVQDVLENNQSQSL-PSLFRP---SANSEPEDPKTFSQAFSFV 301
           GR    P   K  ++IPS Q+V  +  S S  P  + P   +A S      +FSQAFSF+
Sbjct: 55  GRRRRQPEPGKNLIKIPSYQEVFGSGASSSAAPPSYNPPPTTAASSSSSSSSFSQAFSFL 114

Query: 302 KKTEFYXXXXXXXXXXXXXXXXXXXQLVSRQGKFPPASAPVGRNGIVVGQRQQGNPLLKY 481
           K TEFY                   Q  + +     ++A   +N I+V  RQ+GNPLLK+
Sbjct: 115 KSTEFYSPPPPPP------------QTTTPRPPQASSAAQAPKNAILVSHRQKGNPLLKH 162

Query: 482 IKNVRWTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRIILCHVDV 661
           I+N RWTY DIVPDY+LGQ++CALYISLRYHLLHPDY+YYRIRELQK+++LR+ILCH+DV
Sbjct: 163 IRNARWTYADIVPDYVLGQSSCALYISLRYHLLHPDYLYYRIRELQKNFKLRVILCHIDV 222

Query: 662 DDVVKPLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           +DVVKPLHEV RT++LHDCTL+CGWSL+EC RYLETIK Y
Sbjct: 223 EDVVKPLHEVTRTSLLHDCTLLCGWSLEECGRYLETIKVY 262


>gb|EEC67317.1| hypothetical protein OsI_34337 [Oryza sativa Indica Group]
          Length = 430

 Score =  239 bits (611), Expect = 6e-61
 Identities = 120/220 (54%), Positives = 151/220 (68%), Gaps = 4/220 (1%)
 Frame = +2

Query: 134 GRGDEAPMQKKICVQIPSVQDVLENNQSQSL-PSLFRPS---ANSEPEDPKTFSQAFSFV 301
           GR    P   K  ++IPS Q+V  +  S S  P  + P+   A S      +FSQAFSF+
Sbjct: 55  GRRRRQPEPGKNLIKIPSYQEVFGSGASSSAAPPSYNPAPTTAASSSSSSSSFSQAFSFL 114

Query: 302 KKTEFYXXXXXXXXXXXXXXXXXXXQLVSRQGKFPPASAPVGRNGIVVGQRQQGNPLLKY 481
           K TEFY                   Q  + +     ++A   +N I+V  RQ+GNPLLK+
Sbjct: 115 KSTEFYSPPPPPP------------QTTTPRPPQASSAAQAPKNAILVSHRQKGNPLLKH 162

Query: 482 IKNVRWTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRIILCHVDV 661
           I+N RWTY DIVPDY+LGQ++CALYISLRYHLLHPDY+YYRIRELQK+++LR+ILCH+DV
Sbjct: 163 IRNARWTYADIVPDYVLGQSSCALYISLRYHLLHPDYLYYRIRELQKNFKLRVILCHIDV 222

Query: 662 DDVVKPLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           +DVVKPLHEV RT++LHDCTL+CGWSL+EC RYLETIK Y
Sbjct: 223 EDVVKPLHEVTRTSLLHDCTLLCGWSLEECGRYLETIKVY 262


>ref|XP_001769682.1| predicted protein [Physcomitrella patens]
           gi|162679031|gb|EDQ65483.1| predicted protein
           [Physcomitrella patens]
          Length = 279

 Score =  239 bits (611), Expect = 6e-61
 Identities = 116/204 (56%), Positives = 148/204 (72%), Gaps = 3/204 (1%)
 Frame = +2

Query: 179 IPSVQDVLENNQSQSLPSLFRPSANSEPEDPKTFSQAFSFVKKTEFYXXXXXXXXXXXXX 358
           IPS  +VLE ++ Q+ PS FRPS+++ P        AFSFV++TEFY             
Sbjct: 1   IPSHAEVLERSRPQAPPSFFRPSSSAAPP-------AFSFVRQTEFYTPPPAAPTPTVPV 53

Query: 359 XXXXXXQ---LVSRQGKFPPASAPVGRNGIVVGQRQQGNPLLKYIKNVRWTYGDIVPDYL 529
                     + SR  +  P      RN I+V +RQ GNP+LKYI+NVRW +GDIVPDYL
Sbjct: 54  APSEGVPGNGVGSRSQEALPTVNSQARNAILVNRRQTGNPVLKYIRNVRWVFGDIVPDYL 113

Query: 530 LGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRIILCHVDVDDVVKPLHEVIRTAVL 709
           LGQ+TCALYISLRYHLLHPDY+Y+RIRELQK +RLR++LCHVD++DV+KPLHEVI+T++L
Sbjct: 114 LGQSTCALYISLRYHLLHPDYLYFRIRELQKGFRLRVVLCHVDLEDVIKPLHEVIKTSLL 173

Query: 710 HDCTLICGWSLQECARYLETIKAY 781
           HDC+L+C WSL+ECARYLET+K Y
Sbjct: 174 HDCSLLCAWSLEECARYLETLKTY 197


>gb|AAG13428.1|AC051634_9 putative nucleotide repair protein [Oryza sativa Japonica Group]
          Length = 395

 Score =  239 bits (611), Expect = 6e-61
 Identities = 120/220 (54%), Positives = 151/220 (68%), Gaps = 4/220 (1%)
 Frame = +2

Query: 134 GRGDEAPMQKKICVQIPSVQDVLENNQSQSL-PSLFRP---SANSEPEDPKTFSQAFSFV 301
           GR    P   K  ++IPS Q+V  +  S S  P  + P   +A S      +FSQAFSF+
Sbjct: 12  GRRRRQPEPGKNLIKIPSYQEVFGSGASSSAAPPSYNPPPTTAASSSSSSSSFSQAFSFL 71

Query: 302 KKTEFYXXXXXXXXXXXXXXXXXXXQLVSRQGKFPPASAPVGRNGIVVGQRQQGNPLLKY 481
           K TEFY                   Q  + +     ++A   +N I+V  RQ+GNPLLK+
Sbjct: 72  KSTEFYSPPPPPP------------QTTTPRPPQASSAAQAPKNAILVSHRQKGNPLLKH 119

Query: 482 IKNVRWTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRIILCHVDV 661
           I+N RWTY DIVPDY+LGQ++CALYISLRYHLLHPDY+YYRIRELQK+++LR+ILCH+DV
Sbjct: 120 IRNARWTYADIVPDYVLGQSSCALYISLRYHLLHPDYLYYRIRELQKNFKLRVILCHIDV 179

Query: 662 DDVVKPLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           +DVVKPLHEV RT++LHDCTL+CGWSL+EC RYLETIK Y
Sbjct: 180 EDVVKPLHEVTRTSLLHDCTLLCGWSLEECGRYLETIKVY 219


>ref|XP_006662516.1| PREDICTED: DNA excision repair protein ERCC-1-like [Oryza
           brachyantha]
          Length = 383

 Score =  239 bits (610), Expect = 8e-61
 Identities = 119/221 (53%), Positives = 150/221 (67%), Gaps = 6/221 (2%)
 Frame = +2

Query: 137 RGDEAPMQKKICVQIPSVQDVLENNQSQSLPSLFRPSANSEPEDPKT------FSQAFSF 298
           +G   P   K  ++IPS Q+V  +  S S      PS N  P    T      FSQAFSF
Sbjct: 10  QGRRQPEPGKNIIKIPSYQEVFGSGASSSPAP---PSYNPPPPSAATASSSSSFSQAFSF 66

Query: 299 VKKTEFYXXXXXXXXXXXXXXXXXXXQLVSRQGKFPPASAPVGRNGIVVGQRQQGNPLLK 478
           +K TEFY                   Q  + +     +SAP  +N I+V  RQ+GNPLLK
Sbjct: 67  LKSTEFYSPPPPPP------------QATTPRPPHASSSAPAPKNAILVSHRQKGNPLLK 114

Query: 479 YIKNVRWTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRIILCHVD 658
           +I+N RWT+ D+VPDY+LGQ++CALY+S+RYHLLHPDY+YYRIRELQK+++LR+ILCH+D
Sbjct: 115 HIRNARWTFADVVPDYVLGQSSCALYLSVRYHLLHPDYLYYRIRELQKNFKLRVILCHID 174

Query: 659 VDDVVKPLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           V+DVVKPLHEV RTA+LHDCTL+CGWSL+EC RYLETIK Y
Sbjct: 175 VEDVVKPLHEVTRTAILHDCTLLCGWSLEECGRYLETIKVY 215


>ref|XP_004302450.1| PREDICTED: DNA excision repair protein ERCC-1-like [Fragaria vesca
           subsp. vesca]
          Length = 380

 Score =  238 bits (608), Expect = 1e-60
 Identities = 123/229 (53%), Positives = 157/229 (68%), Gaps = 11/229 (4%)
 Frame = +2

Query: 128 RMGRGDEAPMQKKICVQIPSVQDVLENNQSQSLP-SLFRPSANSEPEDPKTFSQAFSFVK 304
           R+   + +  + K  ++IPS Q+V+E++QS+S P SLF PS        KTFSQAF+FVK
Sbjct: 6   RVHNTESSSQKNKTVIKIPSFQEVIESSQSKSTPPSLFAPS--------KTFSQAFAFVK 57

Query: 305 KTEFYXXXXXXXXXXXXXXXXXXXQLVSRQGKFPPASAPVG----------RNGIVVGQR 454
            +EFY                      + Q   P +SAP            RN I+V  R
Sbjct: 58  SSEFYSPPKPAETSNSRE---------TGQFDVPSSSAPTNAVASSSSAQRRNAILVSNR 108

Query: 455 QQGNPLLKYIKNVRWTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRL 634
           Q+GNPLLK+I+NVRW + DIV DYLLGQ++CALY+SLRYHLLHPDY+YYRIRELQK+Y+L
Sbjct: 109 QKGNPLLKHIRNVRWEFADIVCDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNYKL 168

Query: 635 RIILCHVDVDDVVKPLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           R++LCHVDV+DVVKPL EV +TA+LH+CTL+C WSL+EC RYLETIK Y
Sbjct: 169 RVVLCHVDVEDVVKPLLEVTKTAMLHECTLLCAWSLEECGRYLETIKVY 217


>ref|XP_004982591.1| PREDICTED: DNA excision repair protein ERCC-1-like [Setaria
           italica]
          Length = 392

 Score =  238 bits (606), Expect = 2e-60
 Identities = 119/229 (51%), Positives = 151/229 (65%), Gaps = 13/229 (5%)
 Frame = +2

Query: 134 GRGDEAPMQK---KICVQIPSVQDVLENNQSQS----------LPSLFRPSANSEPEDPK 274
           GR  + P ++   K  ++IPS Q+V     S S          L S   P+A+S      
Sbjct: 4   GREQQGPPERQPGKNLIKIPSYQEVFGTGASSSSSTPPSYNPPLASAGAPAASSSSSSSG 63

Query: 275 TFSQAFSFVKKTEFYXXXXXXXXXXXXXXXXXXXQLVSRQGKFPPASAPVGRNGIVVGQR 454
           +FSQAFSF+K +EFY                              A AP  +N I+V  R
Sbjct: 64  SFSQAFSFLKSSEFYSPPPPPPQPTSTPRPPQASS---------SAPAPQSKNAILVSHR 114

Query: 455 QQGNPLLKYIKNVRWTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRL 634
           Q+GNPLLK+I+N RWT+ D+VPDY+LGQ++CALY+S+RYHLLHPDY+YYRIRELQK++RL
Sbjct: 115 QRGNPLLKHIRNARWTFADVVPDYVLGQSSCALYLSIRYHLLHPDYLYYRIRELQKNFRL 174

Query: 635 RIILCHVDVDDVVKPLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           R+ILCHVDV+DVVKPLHE+ RTA+LHDCTL+CGWSL+EC RYLETIK Y
Sbjct: 175 RVILCHVDVEDVVKPLHEITRTALLHDCTLLCGWSLEECGRYLETIKVY 223


>gb|EMJ06496.1| hypothetical protein PRUPE_ppa006720mg [Prunus persica]
          Length = 398

 Score =  238 bits (606), Expect = 2e-60
 Identities = 122/226 (53%), Positives = 155/226 (68%), Gaps = 13/226 (5%)
 Frame = +2

Query: 143 DEAPMQKKICVQIPSVQDVLENNQSQSLP-SLFRPSANSEPEDPKTFSQAFSFVKKTEFY 319
           D+   +KK  ++IPS Q+VLE+ QS+S P SLF PS        ++FSQAF+FVK +EFY
Sbjct: 13  DQNKNKKKTVIKIPSFQEVLESAQSKSTPLSLFTPS--------QSFSQAFAFVKSSEFY 64

Query: 320 XXXXXXXXXXXXXXXXXXXQLVSR-QGKFPPASAPVG-----------RNGIVVGQRQQG 463
                                    Q   P +SAP             RN I+V  RQ+G
Sbjct: 65  SSPPPPATSSQPLQASDTGNSSKTGQSDVPSSSAPTNAVASSSSPAQRRNAIIVSHRQKG 124

Query: 464 NPLLKYIKNVRWTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRII 643
           NPLLK+I+NVRW + DIV DYLLGQ++CALY+SLRYHLLHPDY+YYRIRELQK+++LR++
Sbjct: 125 NPLLKHIRNVRWEFADIVCDYLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVV 184

Query: 644 LCHVDVDDVVKPLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           LCH+DV+DVVKPL EV +TA+LH+CTL+CGWSL+EC RYLETIK Y
Sbjct: 185 LCHIDVEDVVKPLLEVTKTALLHECTLLCGWSLEECGRYLETIKVY 230


>ref|XP_004495745.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cicer
           arietinum]
          Length = 652

 Score =  237 bits (604), Expect = 4e-60
 Identities = 116/219 (52%), Positives = 154/219 (70%), Gaps = 6/219 (2%)
 Frame = +2

Query: 143 DEAPMQKKICVQIPSVQDVLENNQSQSLP-SLFRPSANSEPEDPKTFSQAFSFVKKTEFY 319
           +E   +  + ++IPS Q+V+E++Q++S P SLF PS        +TFS+AF+FVK +EFY
Sbjct: 268 EEQNKKSSVVIRIPSYQEVVESSQAKSTPPSLFIPS--------QTFSEAFAFVKSSEFY 319

Query: 320 XXXXXXXXXXXXXXXXXXXQLVSR-----QGKFPPASAPVGRNGIVVGQRQQGNPLLKYI 484
                                 S        K P +     RN I+V  RQ+GNPLLK+I
Sbjct: 320 SPPPSLPKETGQSEASSSTPSTSNTVPAVSSKLPSSQQTQNRNAILVSNRQKGNPLLKHI 379

Query: 485 KNVRWTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRIILCHVDVD 664
           +NV+WT+ D+V D+LLGQ++CALY+SLRYHLLHPDY+YYRIRELQK+++LR++LCHVDV+
Sbjct: 380 RNVKWTFADVVCDFLLGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRLVLCHVDVE 439

Query: 665 DVVKPLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           DVVKPL EV +TA+LHDCTL+CGWSL+EC RYLETIK Y
Sbjct: 440 DVVKPLLEVTKTALLHDCTLVCGWSLEECGRYLETIKVY 478


>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
           gi|296088298|emb|CBI36743.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  237 bits (604), Expect = 4e-60
 Identities = 120/219 (54%), Positives = 151/219 (68%), Gaps = 4/219 (1%)
 Frame = +2

Query: 137 RGDEAPMQKKICVQIPSVQDVLENNQSQSLPSLFRPSANSEPEDPKTFSQAFSFVKKTEF 316
           R DE   +  I ++IPS Q+VLE++QS++  SLF PS +        FSQAFSFVK ++ 
Sbjct: 12  RDDEKKNKSSIVIKIPSYQEVLESSQSKTTSSLFTPSPS--------FSQAFSFVKSSQS 63

Query: 317 YXXXXXXXXXXXXXXXXXXXQLV---SRQGKFPPASAPV-GRNGIVVGQRQQGNPLLKYI 484
           Y                   + +   S     P  S     RN I+V  RQ+GNPLLK+I
Sbjct: 64  YTPPPPATPPPPPPPSSRQVEQLEAPSSSSSSPSLSRSAQSRNAILVSHRQKGNPLLKHI 123

Query: 485 KNVRWTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRIILCHVDVD 664
           +NVRW + DIV DYLLGQN+CALY+SLRYHLLHPDY+YYRIRELQK+++LR++LCHVDV+
Sbjct: 124 RNVRWDFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVE 183

Query: 665 DVVKPLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           DV+KPL EV RTA+LHDCTL+C WSL+EC RYLETIK Y
Sbjct: 184 DVIKPLLEVTRTALLHDCTLLCAWSLEECGRYLETIKVY 222


>ref|NP_001131279.1| uncharacterized protein LOC100192592 [Zea mays]
           gi|194691068|gb|ACF79618.1| unknown [Zea mays]
           gi|414870731|tpg|DAA49288.1| TPA: mating-type switching
           protein swi10 [Zea mays]
          Length = 397

 Score =  237 bits (604), Expect = 4e-60
 Identities = 118/229 (51%), Positives = 152/229 (66%), Gaps = 13/229 (5%)
 Frame = +2

Query: 134 GRGDEAPMQK---KICVQIPSVQDVLEN--NQSQSLPSLFRP--------SANSEPEDPK 274
           GR  +AP +    K  ++IPS Q+V     + S S P  + P        +A+S      
Sbjct: 4   GREQQAPPESQPGKNLIKIPSYQEVFGTGASTSSSKPPSYNPPVATSAAAAASSSSSSSG 63

Query: 275 TFSQAFSFVKKTEFYXXXXXXXXXXXXXXXXXXXQLVSRQGKFPPASAPVGRNGIVVGQR 454
           +FSQAFSF+K +EFY                            P A  P  +N I+V  R
Sbjct: 64  SFSQAFSFLKSSEFYSPPPPPPPQPTTTPRPTQAS--------PSAPTPQSKNSILVSHR 115

Query: 455 QQGNPLLKYIKNVRWTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRL 634
           Q+GNPLLK+I+N RWT+ D+VPDY+LGQ++CALY+S+RYHLLHPDY+YYRIRELQK++RL
Sbjct: 116 QRGNPLLKHIRNARWTFADVVPDYVLGQSSCALYLSIRYHLLHPDYLYYRIRELQKNFRL 175

Query: 635 RIILCHVDVDDVVKPLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           R+ILCHVDV+DV+KPLHE+ RTA+LHDCTL+CGWSL+EC RYLETIK Y
Sbjct: 176 RVILCHVDVEDVIKPLHEITRTALLHDCTLLCGWSLEECGRYLETIKVY 224


>gb|ACG48134.1| mating-type switching protein swi10 [Zea mays]
          Length = 396

 Score =  236 bits (602), Expect = 7e-60
 Identities = 117/229 (51%), Positives = 152/229 (66%), Gaps = 13/229 (5%)
 Frame = +2

Query: 134 GRGDEAPMQK---KICVQIPSVQDVLEN--NQSQSLPSLFRP--------SANSEPEDPK 274
           GR  +AP +    K  ++IPS Q+V     + S S P  + P        +A+S      
Sbjct: 4   GREQQAPPESQPGKNLIKIPSYQEVFGTGASSSSSKPPSYNPPVATSAAAAASSSSSSSG 63

Query: 275 TFSQAFSFVKKTEFYXXXXXXXXXXXXXXXXXXXQLVSRQGKFPPASAPVGRNGIVVGQR 454
           +FSQAFSF+K +EFY                            P A  P  +N I+V  R
Sbjct: 64  SFSQAFSFLKSSEFYSPPPPPPQPTTTPRPTQAS---------PSAPTPQSKNSILVSHR 114

Query: 455 QQGNPLLKYIKNVRWTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRL 634
           Q+GNPLLK+I+N RWT+ D+VPDY+LGQ++CALY+S+RYHLLHPDY+YYRIRE+QK++RL
Sbjct: 115 QRGNPLLKHIRNARWTFADVVPDYVLGQSSCALYLSIRYHLLHPDYLYYRIREMQKNFRL 174

Query: 635 RIILCHVDVDDVVKPLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           R+ILCHVDV+DV+KPLHE+ RTA+LHDCTL+CGWSL+EC RYLETIK Y
Sbjct: 175 RVILCHVDVEDVIKPLHEITRTALLHDCTLLCGWSLEECGRYLETIKVY 223


>ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago truncatula]
           gi|355480123|gb|AES61326.1| DNA excision repair protein
           ERCC-1 [Medicago truncatula]
          Length = 401

 Score =  234 bits (597), Expect = 2e-59
 Identities = 117/214 (54%), Positives = 152/214 (71%), Gaps = 11/214 (5%)
 Frame = +2

Query: 173 VQIPSVQDVLENNQSQSLP-SLFRPSANSEPEDPKTFSQAFSFVKKTEFYXXXXXXXXXX 349
           ++IPS Q+V+E++Q++S P SLF PS        +TFSQAF+FVK +EFY          
Sbjct: 20  IRIPSYQEVIESSQTKSTPPSLFVPS--------QTFSQAFAFVKSSEFYSPPPSLPKEN 71

Query: 350 XXXXXXXXXQLVSRQGKFPPASAP----------VGRNGIVVGQRQQGNPLLKYIKNVRW 499
                       S      PA++P            RN I+V  RQ+GNPLLK+I+NVRW
Sbjct: 72  APSNASSSTPSTSSATNNAPAASPNLPNSNSQPTQNRNAILVSNRQKGNPLLKHIRNVRW 131

Query: 500 TYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRIILCHVDVDDVVKP 679
           T+ D+V D+LLGQ++CALY+SLRYHLLHPDY+Y+RIRELQK+++LR++LCHVDV+DVVKP
Sbjct: 132 TFADVVCDFLLGQSSCALYLSLRYHLLHPDYLYHRIRELQKNFKLRVVLCHVDVEDVVKP 191

Query: 680 LHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           L EV +TA+LHDCTL+CGWSL+EC RYLETIK Y
Sbjct: 192 LLEVTKTALLHDCTLLCGWSLEECGRYLETIKVY 225


>ref|XP_004235989.1| PREDICTED: DNA excision repair protein ERCC-1-like [Solanum
           lycopersicum]
          Length = 390

 Score =  233 bits (593), Expect = 7e-59
 Identities = 117/213 (54%), Positives = 146/213 (68%), Gaps = 5/213 (2%)
 Frame = +2

Query: 158 QKKICVQIPSVQDVLENNQ----SQSLPSLFRPSANSEPEDPKTFSQAFSFVKKTEFYXX 325
           +K   +QIPS ++V+E +     + S  SLF P+ +        FSQAF FVK +EFY  
Sbjct: 12  KKSFVIQIPSYEEVMECSSQPKTASSSSSLFNPTPS--------FSQAFKFVKNSEFYSP 63

Query: 326 XXXXXXXXXXXXXXXXXQLV-SRQGKFPPASAPVGRNGIVVGQRQQGNPLLKYIKNVRWT 502
                             +  S     P  S+   RN I+V  RQ+GNPLLK+I+NVRWT
Sbjct: 64  PPPSSSQSATPRQVNSSHVTASSSSSTPTPSSSANRNAILVSNRQKGNPLLKHIRNVRWT 123

Query: 503 YGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRIILCHVDVDDVVKPL 682
           + DIV DYLLG NTCALY+SLRYHLLHPDY+Y+RIRELQK++RLRIILCHVDV+DV+KPL
Sbjct: 124 FADIVCDYLLGPNTCALYLSLRYHLLHPDYLYFRIRELQKNFRLRIILCHVDVEDVMKPL 183

Query: 683 HEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
            EV RT++LHDCTL+CGWSL+EC RYLET+K Y
Sbjct: 184 LEVTRTSLLHDCTLLCGWSLEECGRYLETVKVY 216


>ref|XP_002464363.1| hypothetical protein SORBIDRAFT_01g016980 [Sorghum bicolor]
           gi|241918217|gb|EER91361.1| hypothetical protein
           SORBIDRAFT_01g016980 [Sorghum bicolor]
          Length = 397

 Score =  232 bits (592), Expect = 9e-59
 Identities = 121/236 (51%), Positives = 158/236 (66%), Gaps = 20/236 (8%)
 Frame = +2

Query: 134 GRGDEAPMQK---KICVQIPSVQDVLEN--NQSQSLPSLFRP-----------SANSEPE 265
           GR  +AP +    K  ++IPS Q+V     + S S P+ + P           +A+S   
Sbjct: 4   GREQQAPPEGQPGKNLIKIPSYQEVFGTGASSSSSKPASYNPPLASSGGTAAAAASSSSS 63

Query: 266 DPKTFSQAFSFVKKTEFYXXXXXXXXXXXXXXXXXXXQLVSRQGKFPPA--SAPV--GRN 433
              +FSQAFSF+K +EFY                   Q  +   + P A  SAP    +N
Sbjct: 64  SSGSFSQAFSFLKSSEFY-----------SPPPPPPPQPTTTTPRPPQASPSAPTRQSKN 112

Query: 434 GIVVGQRQQGNPLLKYIKNVRWTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRE 613
            I+V  RQ+GNPLLK+I+N RWT+ D+VPDY+LGQ++CALY+S+RYHLLHPDY+YYRIRE
Sbjct: 113 AILVSHRQRGNPLLKHIRNARWTFADVVPDYVLGQSSCALYLSIRYHLLHPDYLYYRIRE 172

Query: 614 LQKSYRLRIILCHVDVDDVVKPLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           LQK++RLR+ILCHVDV+DV+KPLHE+ RTA+LHDCTL+CGWSL+EC RYLETIK Y
Sbjct: 173 LQKNFRLRVILCHVDVEDVIKPLHEITRTALLHDCTLLCGWSLEECGRYLETIKVY 228


>ref|XP_006298222.1| hypothetical protein CARUB_v10014280mg [Capsella rubella]
           gi|482566931|gb|EOA31120.1| hypothetical protein
           CARUB_v10014280mg [Capsella rubella]
          Length = 298

 Score =  230 bits (587), Expect = 4e-58
 Identities = 114/223 (51%), Positives = 153/223 (68%), Gaps = 17/223 (7%)
 Frame = +2

Query: 164 KICVQIPSVQDVLENNQSQSLP-SLFRPSANSEPEDPKTFSQAFSFVKKTEFYXXXXXXX 340
           +I + +PS Q+VLE++Q++S P SLF+PS        +TFSQAF+FVK ++ Y       
Sbjct: 25  QIVIGVPSYQEVLESSQTKSTPPSLFKPS--------QTFSQAFAFVKSSDVYSPPPPPP 76

Query: 341 XXXXXXXXXXXXQLVSRQGKFP----------------PASAPVGRNGIVVGQRQQGNPL 472
                       Q+ S    F                 P++A   RN I+V  RQ+GNPL
Sbjct: 77  PPSSSSQPPGASQVPSSSETFQTDGASSSSTPVTTGSLPSNATQTRNAILVSNRQKGNPL 136

Query: 473 LKYIKNVRWTYGDIVPDYLLGQNTCALYISLRYHLLHPDYIYYRIRELQKSYRLRIILCH 652
           LK+I+NV+W + DI+PDY+LGQ++CALY+SLRYHLLHPDY+Y+RIRELQK+++LR++LCH
Sbjct: 137 LKHIRNVKWVFSDIIPDYVLGQSSCALYLSLRYHLLHPDYLYFRIRELQKNFKLRVVLCH 196

Query: 653 VDVDDVVKPLHEVIRTAVLHDCTLICGWSLQECARYLETIKAY 781
           VDV+D VKPL EV +TA+LHDCTL+C WS+ ECARYLETIK Y
Sbjct: 197 VDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVY 239