BLASTX nr result
ID: Ephedra25_contig00005847
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00005847
(453 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [A... 75 1e-11
gb|EPS70289.1| hypothetical protein M569_04468, partial [Genlise... 74 2e-11
gb|EMT27792.1| Putative RNA-dependent RNA polymerase 1 [Aegilops... 74 2e-11
ref|XP_006477872.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 73 3e-11
gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare su... 73 3e-11
ref|XP_006469266.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 73 4e-11
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 73 4e-11
gb|EMT03978.1| Putative RNA-dependent RNA polymerase 1 [Aegilops... 73 4e-11
emb|CBI26820.3| unnamed protein product [Vitis vinifera] 72 8e-11
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 72 8e-11
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera] 72 8e-11
ref|XP_006477873.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 72 1e-10
sp|Q0DXS3.2|RDR1_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 72 1e-10
gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japo... 72 1e-10
gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare] 72 1e-10
gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indi... 72 1e-10
gb|ADN33705.1| RNA-dependent RNA polymerase [Cucumis melo subsp.... 71 2e-10
gb|ESW25212.1| hypothetical protein PHAVU_003G016800g [Phaseolus... 70 2e-10
ref|XP_004151456.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 70 2e-10
gb|ADU77017.1| RNA-dependent RNA polymerase 1c [Cucumis sativus] 70 2e-10
>ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda]
gi|548853371|gb|ERN11375.1| hypothetical protein
AMTR_s00176p00039530 [Amborella trichopoda]
Length = 1210
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = -3
Query: 451 DEYEMASAWYHITYHPQYWGYGDYTEKD-RGNPHFISFPWIVHDKLLMIKRNK 296
D Y ASAWYHITYHP+YW G Y E+D R HFISFPW ++DKL+ IKR++
Sbjct: 1137 DVYAKASAWYHITYHPEYW--GSYFEEDGRNRAHFISFPWCIYDKLIHIKRHR 1187
>gb|EPS70289.1| hypothetical protein M569_04468, partial [Genlisea aurea]
Length = 1095
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/59 (55%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 451 DEYEMASAWYHITYHPQYWG-YGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTKGSKL 278
D Y ASAWYH+TYHP YWG Y + +D HFISFPW VHDKL+ IKR+ + L
Sbjct: 1034 DAYAKASAWYHVTYHPDYWGCYNEGLRRD----HFISFPWCVHDKLIKIKRDSVRSQGL 1088
>gb|EMT27792.1| Putative RNA-dependent RNA polymerase 1 [Aegilops tauschii]
Length = 1144
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/54 (61%), Positives = 38/54 (70%)
Frame = -3
Query: 436 ASAWYHITYHPQYWGYGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTKGSKLL 275
ASAWYH+TYHP+YWG Y E PHFISFPW V+DKL+ IKR K K+L
Sbjct: 1080 ASAWYHVTYHPEYWGC--YNEGYDHRPHFISFPWCVYDKLIQIKRKKNFVRKML 1131
>ref|XP_006477872.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1082
Score = 73.2 bits (178), Expect = 3e-11
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = -3
Query: 451 DEYEMASAWYHITYHPQYWGYGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTK 290
D Y ASAWYH+ YHP YWG Y E+ HF+SFPW +HDKL+ IKR K +
Sbjct: 1030 DVYAKASAWYHVAYHPSYWGR--YKEEGMNRNHFLSFPWCIHDKLIEIKRGKQR 1081
>gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare]
Length = 1115
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/54 (59%), Positives = 38/54 (70%)
Frame = -3
Query: 436 ASAWYHITYHPQYWGYGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTKGSKLL 275
ASAWYH+TYHPQYWG Y E PH ISFPW V+DKL++IK+ K K+L
Sbjct: 1051 ASAWYHVTYHPQYWGC--YNEGYDHRPHLISFPWCVYDKLILIKQKKNIARKML 1102
>ref|XP_006469266.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 292
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Frame = -3
Query: 451 DEYEMASAWYHITYHPQYWG-YGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTKGSKLL 275
D Y ASAWYH+TYHP YWG Y +D HF+SFPW V+D+L+ IK++KT
Sbjct: 223 DAYAKASAWYHVTYHPDYWGCYNHGMNRD----HFLSFPWCVYDRLVEIKKDKTSIGNAF 278
Query: 274 PAL 266
PAL
Sbjct: 279 PAL 281
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Frame = -3
Query: 451 DEYEMASAWYHITYHPQYWG-YGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTKGSKLL 275
D Y ASAWYH+TYHP YWG Y +D HF+SFPW V+D+L+ IK++KT
Sbjct: 1063 DAYAKASAWYHVTYHPDYWGCYNHGMNRD----HFLSFPWCVYDRLVEIKKDKTSIGNAF 1118
Query: 274 PAL 266
PAL
Sbjct: 1119 PAL 1121
>gb|EMT03978.1| Putative RNA-dependent RNA polymerase 1 [Aegilops tauschii]
Length = 1056
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = -3
Query: 445 YEMASAWYHITYHPQYWGYGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTKGSKLLP 272
Y ASAWYH+TYHP+YWG Y E G PH ISFPW V+DKLL+IK+ K ++ P
Sbjct: 986 YAKASAWYHVTYHPEYWGC--YNE-GYGRPHLISFPWCVYDKLLLIKQRKKFRRRMQP 1040
>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
Length = 919
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 451 DEYEMASAWYHITYHPQYWG-YGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTKGSKL 278
D Y ASAWYH+TYHP YWG Y + ++D HF+SFPW V+DKL+ KR K G L
Sbjct: 849 DVYAKASAWYHVTYHPDYWGCYNEGMDRD----HFLSFPWCVYDKLIHTKRKKMSGRSL 903
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 451 DEYEMASAWYHITYHPQYWG-YGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTKGSKL 278
D Y ASAWYH+TYHP YWG Y + ++D HF+SFPW V+DKL+ KR K G L
Sbjct: 1051 DVYAKASAWYHVTYHPDYWGCYNEGMDRD----HFLSFPWCVYDKLIHTKRKKMSGRSL 1105
>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
Length = 654
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = -3
Query: 451 DEYEMASAWYHITYHPQYWG-YGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTKGSKL 278
D Y ASAWYH+TYHP YWG Y + ++D HF+SFPW V+DKL+ KR K G L
Sbjct: 584 DVYAKASAWYHVTYHPDYWGCYNEGMDRD----HFLSFPWCVYDKLIHTKRKKMSGRSL 638
>ref|XP_006477873.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
gi|568848134|ref|XP_006477874.1| PREDICTED:
RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 277
Score = 71.6 bits (174), Expect = 1e-10
Identities = 29/50 (58%), Positives = 34/50 (68%)
Frame = -3
Query: 445 YEMASAWYHITYHPQYWGYGDYTEKDRGNPHFISFPWIVHDKLLMIKRNK 296
Y ASAWYH+TYHP YWG Y + HF+SFPW +HDKL+ IKR K
Sbjct: 227 YAKASAWYHVTYHPSYWGR--YKREGMNRDHFLSFPWCIHDKLIEIKRGK 274
>sp|Q0DXS3.2|RDR1_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 1; Short=OsRDR1
Length = 740
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -3
Query: 436 ASAWYHITYHPQYWG-YGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTKGSKLLPALFS 260
ASAWYH+TYHP++WG Y + E+ PHFISFPW +++KLL IK+ + K+ P LFS
Sbjct: 679 ASAWYHVTYHPEFWGCYNEGYER----PHFISFPWCIYEKLLRIKQRRKFVRKMQPELFS 734
>gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japonica Group]
Length = 1027
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -3
Query: 436 ASAWYHITYHPQYWG-YGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTKGSKLLPALFS 260
ASAWYH+TYHP++WG Y + E+ PHFISFPW +++KLL IK+ + K+ P LFS
Sbjct: 966 ASAWYHVTYHPEFWGCYNEGYER----PHFISFPWCIYEKLLRIKQRRKFVRKMQPELFS 1021
>gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare]
Length = 1115
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = -3
Query: 436 ASAWYHITYHPQYWGYGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTKGSKLL 275
ASAWYH+TYHPQYWG Y + PH ISFPW V+DKL++IK+ K K+L
Sbjct: 1051 ASAWYHVTYHPQYWGC--YNKGYDHRPHLISFPWCVYDKLILIKQKKNIARKML 1102
>gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indica Group]
Length = 1067
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = -3
Query: 436 ASAWYHITYHPQYWG-YGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTKGSKLLPALFS 260
ASAWYH+TYHP++WG Y + E+ PHFISFPW +++KLL IK+ + K+ P LFS
Sbjct: 1006 ASAWYHVTYHPEFWGCYNEGYER----PHFISFPWCIYEKLLRIKQRRKFVRKMQPELFS 1061
>gb|ADN33705.1| RNA-dependent RNA polymerase [Cucumis melo subsp. melo]
Length = 1137
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 451 DEYEMASAWYHITYHPQYWG-YGDYTEKDRGNPHFISFPWIVHDKLLMIKRNK 296
DEY ASAWY +TYHP YWG Y + T++D HF+SFPW V DKL+ IKR K
Sbjct: 1067 DEYARASAWYCVTYHPDYWGRYNEGTQRD----HFLSFPWCVADKLIQIKREK 1115
>gb|ESW25212.1| hypothetical protein PHAVU_003G016800g [Phaseolus vulgaris]
Length = 1139
Score = 70.5 bits (171), Expect = 2e-10
Identities = 29/53 (54%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 445 YEMASAWYHITYHPQYWG-YGDYTEKDRGNPHFISFPWIVHDKLLMIKRNKTK 290
Y +ASAWYH+TYHP+YWG Y + ++D HF+SFPW VHD L+ IK+ K +
Sbjct: 1058 YAIASAWYHVTYHPRYWGSYNEGLKRD----HFLSFPWCVHDTLIQIKKEKVR 1106
>ref|XP_004151456.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Cucumis sativus]
Length = 401
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 451 DEYEMASAWYHITYHPQYWG-YGDYTEKDRGNPHFISFPWIVHDKLLMIKRNK 296
DEY ASAWY +TYHP YWG Y + T++D HF+SFPW V DKL+ IKR K
Sbjct: 334 DEYARASAWYCVTYHPDYWGCYNEGTKRD----HFLSFPWCVADKLIQIKREK 382
>gb|ADU77017.1| RNA-dependent RNA polymerase 1c [Cucumis sativus]
Length = 400
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 451 DEYEMASAWYHITYHPQYWG-YGDYTEKDRGNPHFISFPWIVHDKLLMIKRNK 296
DEY ASAWY +TYHP YWG Y + T++D HF+SFPW V DKL+ IKR K
Sbjct: 333 DEYARASAWYCVTYHPDYWGCYNEGTKRD----HFLSFPWCVADKLIQIKREK 381