BLASTX nr result

ID: Ephedra25_contig00005822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00005822
         (507 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24494.1| unknown [Picea sitchensis]                              71   1e-10
gb|AFG67784.1| hypothetical protein 2_9274_01, partial [Pinus ta...    57   3e-06

>gb|ABK24494.1| unknown [Picea sitchensis]
          Length = 366

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 8/87 (9%)
 Frame = -3

Query: 505 SSSMLQGLDNMHMEVKQLY--------QKLNSPDGDTKVSEIRECVTKLQKSVQDLEKKM 350
           SS++L  LD +H EVK+LY         K +S     K+ E+R+ V +LQ   + L+K M
Sbjct: 277 SSALLHELDCVHSEVKKLYIVLDKMLADKTSSASNREKMDEVRQSVGQLQGYAETLQKGM 336

Query: 349 APVEKQVQEIYKMLVSSRVTLLGTLSH 269
            P+E Q++E+Y+MLVSSRV LLG  +H
Sbjct: 337 IPLENQIKELYRMLVSSRVALLGVFTH 363


>gb|AFG67784.1| hypothetical protein 2_9274_01, partial [Pinus taeda]
          Length = 136

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
 Frame = -3

Query: 505 SSSMLQGLDNMHMEVKQLYQ--------KLNSPDGDTKVSEIRECVTKLQKSVQDLEKKM 350
           SS++L  LD +H EVK+LY         K NS     K+ E+R+ V +LQ+  + L+K M
Sbjct: 63  SSALLHELDCVHSEVKKLYNVLDKMLADKANSASNREKMDEVRQSVGQLQRYAEVLQKGM 122

Query: 349 APVEKQVQEIYKML 308
            P+E Q++E+Y+ML
Sbjct: 123 IPLENQIKELYRML 136


Top