BLASTX nr result

ID: Ephedra25_contig00005714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00005714
         (734 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006827001.1| hypothetical protein AMTR_s00010p00213530 [A...   229   7e-58
ref|XP_006478000.1| PREDICTED: pentatricopeptide repeat-containi...   225   1e-56
ref|XP_006441020.1| hypothetical protein CICLE_v10024364mg [Citr...   224   2e-56
ref|XP_002529554.1| pentatricopeptide repeat-containing protein,...   222   9e-56
ref|NP_001060614.1| Os07g0674300 [Oryza sativa Japonica Group] g...   221   1e-55
gb|EAZ05114.1| hypothetical protein OsI_27306 [Oryza sativa Indi...   221   1e-55
gb|EMS62346.1| hypothetical protein TRIUR3_16010 [Triticum urartu]    220   4e-55
dbj|BAK00352.1| predicted protein [Hordeum vulgare subsp. vulgare]    219   6e-55
gb|EMT11259.1| hypothetical protein F775_06295 [Aegilops tauschii]    219   7e-55
gb|EMJ10134.1| hypothetical protein PRUPE_ppb014337mg, partial [...   218   1e-54
ref|XP_003562458.1| PREDICTED: pentatricopeptide repeat-containi...   218   1e-54
ref|XP_002322098.1| hypothetical protein POPTR_0015s04490g [Popu...   218   2e-54
ref|XP_004236430.1| PREDICTED: pentatricopeptide repeat-containi...   218   2e-54
ref|XP_002463378.1| hypothetical protein SORBIDRAFT_02g042720 [S...   218   2e-54
ref|XP_006341533.1| PREDICTED: pentatricopeptide repeat-containi...   217   3e-54
ref|XP_004959886.1| PREDICTED: pentatricopeptide repeat-containi...   216   5e-54
emb|CBI35789.3| unnamed protein product [Vitis vinifera]              216   5e-54
ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containi...   216   5e-54
ref|XP_004301253.1| PREDICTED: pentatricopeptide repeat-containi...   216   8e-54
ref|XP_003623405.1| Pentatricopeptide repeat-containing protein ...   213   7e-53

>ref|XP_006827001.1| hypothetical protein AMTR_s00010p00213530 [Amborella trichopoda]
            gi|548831430|gb|ERM94238.1| hypothetical protein
            AMTR_s00010p00213530 [Amborella trichopoda]
          Length = 823

 Score =  229 bits (584), Expect = 7e-58
 Identities = 106/243 (43%), Positives = 160/243 (65%)
 Frame = -3

Query: 729  LKNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVI 550
            + N SELLN ++ MLQ+GC PD+ TLN+VVHG C+AG+++EA  +L+DM++G  C PDV+
Sbjct: 423  INNPSELLNVLVSMLQSGCKPDVVTLNTVVHGFCEAGRVDEAMKVLDDMVKGNVCVPDVV 482

Query: 549  TFSSIIHGLSNRGQTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEM 370
            TF+++I GLS+ G+TDEALE+L  M + G  P   TYN I   LC+  K D+A ++  +M
Sbjct: 483  TFTTVICGLSDMGRTDEALELLQNMPKRGFEPTTVTYNAIFRGLCKFSKIDEAMQLFAKM 542

Query: 369  RNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKL 190
                +  D  +F  +  GLC   + ++   FW  VV PS   DD+VYA++L+ +CK GK 
Sbjct: 543  MREKVQADGTTFAILIAGLCNMGQIEEAKRFWEAVVWPSKVSDDFVYAAILKGMCKVGKF 602

Query: 189  REAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTI 10
             EA + L EL+D   +P +V YN++I+ AC LG  R+A +++  M++N L+ D  TW+T+
Sbjct: 603  SEAINFLYELVDSGVSPKLVAYNILINSACNLGLKREAYRLISEMRKNGLEPDAVTWRTL 662

Query: 9    KLL 1
              L
Sbjct: 663  DKL 665



 Score =  103 bits (257), Expect = 6e-20
 Identities = 60/214 (28%), Positives = 107/214 (50%), Gaps = 1/214 (0%)
 Frame = -3

Query: 648 SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
           ++V   C+ G   E   I  +M  GK    D  +++ +I  LS   Q   A  I + M++
Sbjct: 275 NLVEALCREGFFSEVYNIAEEMPHGKHVNAD-FSYTQMIDSLSRADQNHGASRITYIMKK 333

Query: 468 DGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRKFDK 289
            GLLP+  +YN I+H L + G   +A+++ +E      +P + ++  + +GLCK +   K
Sbjct: 334 RGLLPSFVSYNSIVHGLSKQGSIMRAYQLFEEGIEFDYTPIEPTYKVLVEGLCKVKDVAK 393

Query: 288 GLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVYNVVIH 109
                  ++K S   +  VY   LR LC      E  ++L  ++     P +V  N V+H
Sbjct: 394 ARSVVDVMLKKSNLEESRVYNIFLRALCSINNPSELLNVLVSMLQSGCKPDVVTLNTVVH 453

Query: 108 GACKLGSMRDALKIV-DLMKENRLKADIATWQTI 10
           G C+ G + +A+K++ D++K N    D+ T+ T+
Sbjct: 454 GFCEAGRVDEAMKVLDDMVKGNVCVPDVVTFTTV 487



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 58/285 (20%), Positives = 127/285 (44%), Gaps = 50/285 (17%)
 Frame = -3

Query: 714  ELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSI 535
            E     +++ ++G  P+  +  ++++G CK G+M+ A  + ++M E +   P+ +T+S +
Sbjct: 175  EARELFMELERHGHCPNTVSYTALINGFCKIGEMDVAYKLFDEMKEREI-RPNSLTYSVL 233

Query: 534  IHGLSNRGQTDE-ALEILHQMREDGLLP-------NNFTYNPIIHELCRAGKFDKAFEVM 379
            + G+  +G+ DE   E++ ++ +   +        N   +  ++  LCR G F + + + 
Sbjct: 234  LSGVLQKGKLDEIGRELMGRLWKQMAIDVERDPSINTAAFANLVEALCREGFFSEVYNIA 293

Query: 378  DEM-----------------------RNHGLS------------PDKVSFTFVFDGLCKN 304
            +EM                       +NHG S            P  VS+  +  GL K 
Sbjct: 294  EEMPHGKHVNADFSYTQMIDSLSRADQNHGASRITYIMKKRGLLPSFVSYNSIVHGLSKQ 353

Query: 303  -------RKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDERF 145
                   + F++G+EF Y  ++P+       Y  ++  LCK   + +A  +++ ++ +  
Sbjct: 354  GSIMRAYQLFEEGIEFDYTPIEPT-------YKVLVEGLCKVKDVAKARSVVDVMLKKSN 406

Query: 144  APGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTI 10
                 VYN+ +   C + +  + L ++  M ++  K D+ T  T+
Sbjct: 407  LEESRVYNIFLRALCSINNPSELLNVLVSMLQSGCKPDVVTLNTV 451



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 49/244 (20%), Positives = 109/244 (44%), Gaps = 9/244 (3%)
 Frame = -3

Query: 714 ELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGK-FCPPDVITFSS 538
           E  + ++  L +   PD    NS++   C+A    +   I+  M+  K    P +  ++ 
Sbjct: 103 EAHHRLLFALHSNWLPDERACNSLLVRLCEASSPFDTRKIMTQMVISKPGFVPSLSNYNR 162

Query: 537 IIHGLSNRGQTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHG 358
           ++    +     EA E+  ++   G  PN  +Y  +I+  C+ G+ D A+++ DEM+   
Sbjct: 163 LMSLFCDHRMPHEARELFMELERHGHCPNTVSYTALINGFCKIGEMDVAYKLFDEMKERE 222

Query: 357 LSPDKVSFTFVFDGLCKNRKFDK-GLE----FWYNV---VKPSGNHDDYVYASVLRLLCK 202
           + P+ ++++ +  G+ +  K D+ G E     W  +   V+   + +   +A+++  LC+
Sbjct: 223 IRPNSLTYSVLLSGVLQKGKLDEIGRELMGRLWKQMAIDVERDPSINTAAFANLVEALCR 282

Query: 201 AGKLREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIAT 22
            G   E +++  E+   +       Y  +I    +      A +I  +MK+  L     +
Sbjct: 283 EGFFSEVYNIAEEMPHGKHVNADFSYTQMIDSLSRADQNHGASRITYIMKKRGLLPSFVS 342

Query: 21  WQTI 10
           + +I
Sbjct: 343 YNSI 346



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 2/187 (1%)
 Frame = -3

Query: 564 PPDVITFSSIIHGLSNRGQTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFE 385
           PP+   +S  I  L + G  D+AL +L Q R +G  P +     +I  LC + +F +A  
Sbjct: 50  PPN---WSKTIQALFDAGDIDQALHLLDQFRLNGFRPTSPILFSLIDSLCNSHRFREAHH 106

Query: 384 VMDEMRNHGLSPDKVSFTFVFDGLCK-NRKFDKGLEFWYNVV-KPSGNHDDYVYASVLRL 211
            +    +    PD+ +   +   LC+ +  FD        V+ KP        Y  ++ L
Sbjct: 107 RLLFALHSNWLPDERACNSLLVRLCEASSPFDTRKIMTQMVISKPGFVPSLSNYNRLMSL 166

Query: 210 LCKAGKLREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKAD 31
            C      EA +L  EL      P  V Y  +I+G CK+G M  A K+ D MKE  ++ +
Sbjct: 167 FCDHRMPHEARELFMELERHGHCPNTVSYTALINGFCKIGEMDVAYKLFDEMKEREIRPN 226

Query: 30  IATWQTI 10
             T+  +
Sbjct: 227 SLTYSVL 233


>ref|XP_006478000.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020-like
            isoform X1 [Citrus sinensis]
            gi|568848405|ref|XP_006478001.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At3g18020-like isoform X2 [Citrus sinensis]
            gi|568848407|ref|XP_006478002.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At3g18020-like isoform X3 [Citrus sinensis]
            gi|568848409|ref|XP_006478003.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At3g18020-like isoform X4 [Citrus sinensis]
          Length = 676

 Score =  225 bits (573), Expect = 1e-56
 Identities = 111/244 (45%), Positives = 160/244 (65%), Gaps = 1/244 (0%)
 Frame = -3

Query: 729  LKNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVI 550
            +KN SELLN ++ MLQ  C PD+ TLN+V++G CK G++EEA  +LNDM+ GKFC PD +
Sbjct: 421  IKNPSELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCAPDAV 480

Query: 549  TFSSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDE 373
            TF++II GL N G+  EAL +L+Q M + G  P   TYN ++  L R  + ++A EV + 
Sbjct: 481  TFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLFRLRRVEEAKEVFNC 540

Query: 372  MRNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGK 193
            M   G+  D  ++  V DGLC++ + D+   FW ++V PS  HD+YVYA++++ LC++GK
Sbjct: 541  MLGIGVVADSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGK 600

Query: 192  LREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQT 13
            + EA   L EL+D    P IV YNVVI GACKL   R+A +I+  M++N L  D  TW+ 
Sbjct: 601  INEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRI 660

Query: 12   IKLL 1
            +  L
Sbjct: 661  LDKL 664



 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 1/214 (0%)
 Frame = -3

Query: 648 SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
           ++V   C+ G + E   I  DM +GK    +      +I  L   G+   A  +++ MR+
Sbjct: 273 NLVDSLCREGYVNEVFRIAEDMPQGKSVNEE-FACGHMIDSLCRSGRNHGASRVVYVMRK 331

Query: 468 DGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRKFDK 289
            GL P+  +YN I+H LC+ G   +A+++++E    G  P + ++  + +GLC     +K
Sbjct: 332 RGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEK 391

Query: 288 GLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVYNVVIH 109
             +    ++         +    LR LC      E  ++L  ++  +  P ++  N VI+
Sbjct: 392 ARKVLQFMLSKKDVDRTRICNIYLRALCLIKNPSELLNVLVFMLQTQCQPDVITLNTVIN 451

Query: 108 GACKLGSMRDALKIVDLMKENRLKA-DIATWQTI 10
           G CK+G + +ALK+++ M   +  A D  T+ TI
Sbjct: 452 GFCKMGRIEEALKVLNDMVAGKFCAPDAVTFTTI 485



 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 7/233 (3%)
 Frame = -3

Query: 732 GLKNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCP--P 559
           GL    E       M   G  P++ +  +++HG C+ G+M+ A  + ++M   + C   P
Sbjct: 170 GLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEM---RHCGVLP 226

Query: 558 DVITFSSIIHGLSNRGQTDEALEILHQM-----REDGLLPNNFTYNPIIHELCRAGKFDK 394
           + +T+S ++ G+      + A  ++ ++      E+ L  NN  +  ++  LCR G  ++
Sbjct: 227 NSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCREGYVNE 286

Query: 393 AFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLR 214
            F + ++M       ++ +   + D LC++ +        Y + K         Y S++ 
Sbjct: 287 VFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPSLVSYNSIVH 346

Query: 213 LLCKAGKLREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLM 55
            LCK G    A+ LL E I   + P    Y V++ G C    +  A K++  M
Sbjct: 347 GLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEKARKVLQFM 399



 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 53/249 (21%), Positives = 117/249 (46%), Gaps = 13/249 (5%)
 Frame = -3

Query: 717 SELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCP---PDVIT 547
           +E  +  +  + + C PD  T N ++   C  G     +T+          P   P ++ 
Sbjct: 103 AEAHHRFLLSISSRCIPDERTCNVII--ACLLGSKNPLDTLRVIGCLYNVKPEFVPSLVN 160

Query: 546 FSSIIHGLSNRGQTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMR 367
           ++ ++  L    +  EA ++   M+  G +PN  +Y  +IH  CR G+ D A++V DEMR
Sbjct: 161 YNCLMDQLGGLSRVGEAHKLFFDMKSRGHVPNVVSYTTLIHGYCRTGEMDVAYKVFDEMR 220

Query: 366 NHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDY-----VYASVLRLLCK 202
           + G+ P+ ++++ +  G+ + R  ++     + + +     +D       +A+++  LC+
Sbjct: 221 HCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDSLCR 280

Query: 201 AGKLREAWDLLNEL-----IDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLK 37
            G + E + +  ++     ++E FA G      +I   C+ G    A ++V +M++  L 
Sbjct: 281 EGYVNEVFRIAEDMPQGKSVNEEFACG-----HMIDSLCRSGRNHGASRVVYVMRKRGLT 335

Query: 36  ADIATWQTI 10
             + ++ +I
Sbjct: 336 PSLVSYNSI 344


>ref|XP_006441020.1| hypothetical protein CICLE_v10024364mg [Citrus clementina]
           gi|557543282|gb|ESR54260.1| hypothetical protein
           CICLE_v10024364mg [Citrus clementina]
          Length = 515

 Score =  224 bits (571), Expect = 2e-56
 Identities = 110/244 (45%), Positives = 160/244 (65%), Gaps = 1/244 (0%)
 Frame = -3

Query: 729 LKNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVI 550
           +KN +ELLN ++ MLQ  C PD+ TLN+V++G CK G++EEA  +LNDM+ GKFC PD +
Sbjct: 244 IKNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRIEEALKVLNDMVAGKFCTPDAV 303

Query: 549 TFSSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDE 373
           TF++II GL N G+  EAL +L+Q M + G  P   TYN ++  L R  + ++A EV + 
Sbjct: 304 TFTTIIFGLLNVGRIQEALNLLYQVMPQRGYSPGIVTYNAVLRGLLRLRRVEEAKEVFNC 363

Query: 372 MRNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGK 193
           M   G+  D  ++  V DGLC++ + D+   FW ++V PS  HD+YVYA++++ LC++GK
Sbjct: 364 MLGIGVVSDSTTYAIVIDGLCESNQLDEAKRFWDDIVWPSNIHDNYVYAAMIKGLCRSGK 423

Query: 192 LREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQT 13
           + EA   L EL+D    P IV YNVVI GACKL   R+A +I+  M++N L  D  TW+ 
Sbjct: 424 IHEAVHFLYELVDSGVTPNIVCYNVVIDGACKLSMKREAYQILREMRKNGLNPDAVTWRI 483

Query: 12  IKLL 1
           +  L
Sbjct: 484 LDKL 487



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 1/214 (0%)
 Frame = -3

Query: 648 SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
           ++V   C+ G + E   I  DM +GK    +      +I  L   G+   A  +++ MR+
Sbjct: 96  NLVDSLCREGYVNEVFRIAEDMPQGKSVNEE-FACGHMIDSLCRSGRNHGASRVVYVMRK 154

Query: 468 DGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRKFDK 289
            GL P+  +YN I+H LC+ G   +A+++++E    G  P + ++  + +GLC     +K
Sbjct: 155 RGLTPSLVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGYLPSEHTYKVLVEGLCGESDLEK 214

Query: 288 GLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVYNVVIH 109
             +    ++         ++   LR LC      E  ++L  ++  +  P ++  N VI+
Sbjct: 215 ARKVLQFMLSKKDVDRTRIFNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTVIN 274

Query: 108 GACKLGSMRDALKIV-DLMKENRLKADIATWQTI 10
           G CK+G + +ALK++ D++       D  T+ TI
Sbjct: 275 GFCKMGRIEEALKVLNDMVAGKFCTPDAVTFTTI 308



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 54/239 (22%), Positives = 108/239 (45%), Gaps = 11/239 (4%)
 Frame = -3

Query: 693 KMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDV----ITFSSIIHG 526
           +M   G  P+  T + +V G  +   +E AN ++  + E      D+      F++++  
Sbjct: 41  EMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWERMKEEEDLSVNNAAFANLVDS 100

Query: 525 LSNRGQTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPD 346
           L   G  +E   I   M +   +   F    +I  LCR+G+   A  V+  MR  GL+P 
Sbjct: 101 LCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRSGRNHGASRVVYVMRKRGLTPS 160

Query: 345 KVSFTFVFDGLCKN-------RKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLR 187
            VS+  +  GLCK+       +  ++G++F Y    PS    ++ Y  ++  LC    L 
Sbjct: 161 LVSYNSIVHGLCKHGGCMRAYQLLEEGIQFGY---LPS----EHTYKVLVEGLCGESDLE 213

Query: 186 EAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTI 10
           +A  +L  ++ ++      ++N+ +   C + +  + L ++  M + + + D+ T  T+
Sbjct: 214 KARKVLQFMLSKKDVDRTRIFNIYLRALCLIKNPTELLNVLVFMLQTQCQPDVITLNTV 272



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 37/166 (22%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
 Frame = -3

Query: 543 SSIIHGLSNRGQTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKA----FEVMD 376
           +S+   L+  G+ D A ++  +MR  G+LPN+ TY+ ++  + R    ++A    F++ +
Sbjct: 20  ASLTSALAITGEMDVAYKVFDEMRHCGVLPNSLTYSVLVRGVLRTRDVERANVLMFKLWE 79

Query: 375 EMR-NHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKA 199
            M+    LS +  +F  + D LC+    ++      ++ +    ++++    ++  LC++
Sbjct: 80  RMKEEEDLSVNNAAFANLVDSLCREGYVNEVFRIAEDMPQGKSVNEEFACGHMIDSLCRS 139

Query: 198 GKLREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVD 61
           G+   A  ++  +      P +V YN ++HG CK G    A ++++
Sbjct: 140 GRNHGASRVVYVMRKRGLTPSLVSYNSIVHGLCKHGGCMRAYQLLE 185


>ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223530966|gb|EEF32823.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score =  222 bits (566), Expect = 9e-56
 Identities = 110/242 (45%), Positives = 158/242 (65%), Gaps = 1/242 (0%)
 Frame = -3

Query: 723  NSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITF 544
            +++ELLN ++ MLQ  C PD+ TLN+VV+G CK  ++EEA TIL DM  GKFC PD +TF
Sbjct: 431  SATELLNVLVSMLQTECQPDVITLNTVVNGFCKMHRIEEALTILTDMTMGKFCAPDAVTF 490

Query: 543  SSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMR 367
            ++II GL N G++ EAL +L++ M E G+ P   TYN +IH L +    ++A      M 
Sbjct: 491  TTIIAGLLNAGRSQEALNLLYKVMHEKGISPGVETYNAVIHGLFKLQLAEEAMRAFKRML 550

Query: 366  NHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLR 187
              G++ D  ++T + DGLC++   DK  + W +V+ PS  HDD+VYAS+L+ LC+AGKL 
Sbjct: 551  AAGVAADSKTYTLIIDGLCESGLIDKAKKLWDDVIWPSRIHDDFVYASILKGLCRAGKLD 610

Query: 186  EAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTIK 7
            EA   L EL+D   +P I+ YN+VI  ACKLG  R+A ++V  M++N L  D  TW+ + 
Sbjct: 611  EACHFLYELVDSGVSPNIISYNIVIDSACKLGMKREAYQVVTEMRKNGLTPDAVTWRILD 670

Query: 6    LL 1
             L
Sbjct: 671  KL 672



 Score = 93.2 bits (230), Expect = 8e-17
 Identities = 55/214 (25%), Positives = 101/214 (47%), Gaps = 1/214 (0%)
 Frame = -3

Query: 648 SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
           +V+   C+ G + +   I  DM +GK    +   ++ +I  L   G+   A  I++ M++
Sbjct: 281 NVIDSLCREGFLNDVFKIAEDMPQGKSVNQE-FAYAHMIDSLCRAGKNHGASRIVYMMKK 339

Query: 468 DGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRKFDK 289
            GL P+  +YN IIH LC+     +A+++ +E    G  P + ++  + + LC+    DK
Sbjct: 340 KGLTPSLVSYNSIIHGLCKERGCMRAYQLFEEGIEFGYLPSEYTYKVLVEALCQEMDLDK 399

Query: 288 GLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVYNVVIH 109
                  ++   G     +Y   LR LC      E  ++L  ++     P ++  N V++
Sbjct: 400 ARRIVEAMLNKDGVDRTRIYNIYLRALCLTNSATELLNVLVSMLQTECQPDVITLNTVVN 459

Query: 108 GACKLGSMRDALKIVDLMKENRLKA-DIATWQTI 10
           G CK+  + +AL I+  M   +  A D  T+ TI
Sbjct: 460 GFCKMHRIEEALTILTDMTMGKFCAPDAVTFTTI 493



 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 48/278 (17%)
 Frame = -3

Query: 699 MIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLS 520
           +  M+  G  P++ T  S++ G C+ G++  A  + ++M E    P + +T+S +I GL 
Sbjct: 188 LFDMISRGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVP-NSLTYSVLIRGLL 246

Query: 519 NRGQTDEALEILHQMRE-------------------------DGLLPN------------ 451
            +G  +   E++  + E                         +G L +            
Sbjct: 247 RQGDFEHGRELMCNLWETMKDEEKNQSVNAAAFVNVIDSLCREGFLNDVFKIAEDMPQGK 306

Query: 450 ----NFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNR------ 301
                F Y  +I  LCRAGK   A  ++  M+  GL+P  VS+  +  GLCK R      
Sbjct: 307 SVNQEFAYAHMIDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSIIHGLCKERGCMRAY 366

Query: 300 -KFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVY 124
             F++G+EF Y    PS    +Y Y  ++  LC+   L +A  ++  ++++       +Y
Sbjct: 367 QLFEEGIEFGY---LPS----EYTYKVLVEALCQEMDLDKARRIVEAMLNKDGVDRTRIY 419

Query: 123 NVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTI 10
           N+ +   C   S  + L ++  M +   + D+ T  T+
Sbjct: 420 NIYLRALCLTNSATELLNVLVSMLQTECQPDVITLNTV 457



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 56/277 (20%), Positives = 114/277 (41%), Gaps = 42/277 (15%)
 Frame = -3

Query: 714 ELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEA-------------------NTIL 592
           E L  +  +  +G  PD    +S++H  C A + +EA                   N ++
Sbjct: 76  EALTLLDHLRLSGYRPDSLNFSSIIHALCDAKRFKEAHHRFLLCIASDCVPDERTCNVLI 135

Query: 591 NDMLEGKF-----------------CPPDVITFSSIIHGLSNRGQTDEALEILHQMREDG 463
             +L+ ++                   P +I ++  I+      Q D A  +L  M   G
Sbjct: 136 ARLLDSQYPHATLHVLYRLFHVKPQFVPSLINYNRFIYQCCEFSQPDVAHRLLFDMISRG 195

Query: 462 LLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRKFDKGL 283
             PN  T+  ++   CR G+   A+++ DEMR   + P+ ++++ +  GL +   F+ G 
Sbjct: 196 HCPNVVTFTSLLTGYCRVGEVGNAYKLFDEMRECSVVPNSLTYSVLIRGLLRQGDFEHGR 255

Query: 282 EFWYNVVKPSGNHDD------YVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVYN 121
           E   N+ +   + +         + +V+  LC+ G L + + +  ++   +       Y 
Sbjct: 256 ELMCNLWETMKDEEKNQSVNAAAFVNVIDSLCREGFLNDVFKIAEDMPQGKSVNQEFAYA 315

Query: 120 VVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTI 10
            +I   C+ G    A +IV +MK+  L   + ++ +I
Sbjct: 316 HMIDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSI 352


>ref|NP_001060614.1| Os07g0674300 [Oryza sativa Japonica Group]
            gi|34393854|dbj|BAC83534.1| pentatricopeptide (PPR)
            repeat-containing protein-like [Oryza sativa Japonica
            Group] gi|34395085|dbj|BAC84771.1| pentatricopeptide
            (PPR) repeat-containing protein-like [Oryza sativa
            Japonica Group] gi|113612150|dbj|BAF22528.1| Os07g0674300
            [Oryza sativa Japonica Group] gi|125601488|gb|EAZ41064.1|
            hypothetical protein OsJ_25552 [Oryza sativa Japonica
            Group]
          Length = 737

 Score =  221 bits (564), Expect = 1e-55
 Identities = 105/242 (43%), Positives = 152/242 (62%), Gaps = 1/242 (0%)
 Frame = -3

Query: 723  NSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITF 544
            N SE L+ ++ MLQ GC PD+ T+N+V+HG CK G+ +EA  I++DML GKFC PDV+TF
Sbjct: 362  NPSEQLDVLVSMLQEGCKPDVITMNTVIHGFCKVGRAQEARRIVDDMLNGKFCAPDVVTF 421

Query: 543  SSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMR 367
            +++I G    G+  EAL +L   M +   LPN  TYN ++  L   G  D+A E ++EM+
Sbjct: 422  TTLISGYLGVGEFAEALHVLSTLMPKHQCLPNVVTYNCVLKGLLSLGLLDRAMEALEEMK 481

Query: 366  NHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLR 187
            +  + PD V+ T +  G C   + +K   FW NV+ PSG HDDYVY+++ R LCK GKL 
Sbjct: 482  SSNVIPDSVTHTVMIKGFCDAGELEKAKSFWDNVIWPSGMHDDYVYSAIFRGLCKLGKLE 541

Query: 186  EAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTIK 7
            +A D L EL+D   APG++ YN+++  ACK G  +   ++V  M+ N +  D  TW+ I 
Sbjct: 542  QACDFLYELVDSGVAPGVLCYNILVDAACKQGLKKLVYQLVKEMRRNGISPDAVTWRIID 601

Query: 6    LL 1
             L
Sbjct: 602  RL 603



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 6/219 (2%)
 Frame = -3

Query: 648 SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
           ++V   C  G       I  +M + +    DV  +S +I  L   GQ   A  I++ M +
Sbjct: 206 NLVQCLCIEGFFHIVFRIAEEMPQQRCGVADVFAYSQMIDSLCRSGQHHGASRIVYIMGK 265

Query: 468 DGLLPNNFTYNPIIHELCRAGKFD---KAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRK 298
            G+ P+  +YN I+H LC + K     +A++++ E       P +V++  + D LC   +
Sbjct: 266 RGMYPSTVSYNCIVHGLCTSQKPGGRLRAYQLVMEGVRFRYHPREVTYKVLVDELCLENE 325

Query: 297 FDKGLEFWYNVVKPSGNHDDY--VYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVY 124
             K  +    ++K + + D    +Y   L  L       E  D+L  ++ E   P ++  
Sbjct: 326 LAKAKDVMELMLKVTPDDDTRTRIYNMFLAALRVVDNPSEQLDVLVSMLQEGCKPDVITM 385

Query: 123 NVVIHGACKLGSMRDALKIVDLMKENRLKA-DIATWQTI 10
           N VIHG CK+G  ++A +IVD M   +  A D+ T+ T+
Sbjct: 386 NTVIHGFCKVGRAQEARRIVDDMLNGKFCAPDVVTFTTL 424



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 56/240 (23%), Positives = 120/240 (50%), Gaps = 12/240 (5%)
 Frame = -3

Query: 693 KMLQNGC-TPDIYTLNSVVHGCCKAGQMEEANTILNDM-LEGKFCPPDVITFSSIIHGLS 520
           +M Q  C   D++  + ++   C++GQ   A+ I+  M   G +  P  ++++ I+HGL 
Sbjct: 226 EMPQQRCGVADVFAYSQMIDSLCRSGQHHGASRIVYIMGKRGMY--PSTVSYNCIVHGLC 283

Query: 519 NRGQTDEALEILHQMREDGLL----PNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLS 352
              +    L   +Q+  +G+     P   TY  ++ ELC   +  KA +VM+ M    ++
Sbjct: 284 TSQKPGGRLR-AYQLVMEGVRFRYHPREVTYKVLVDELCLENELAKAKDVMELMLK--VT 340

Query: 351 PDKVSFTFVFD-GLCKNRKFD---KGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLRE 184
           PD  + T +++  L   R  D   + L+   ++++     D     +V+   CK G+ +E
Sbjct: 341 PDDDTRTRIYNMFLAALRVVDNPSEQLDVLVSMLQEGCKPDVITMNTVIHGFCKVGRAQE 400

Query: 183 AWDLLNELIDERF-APGIVVYNVVIHGACKLGSMRDALKIVD-LMKENRLKADIATWQTI 10
           A  +++++++ +F AP +V +  +I G   +G   +AL ++  LM +++   ++ T+  +
Sbjct: 401 ARRIVDDMLNGKFCAPDVVTFTTLISGYLGVGEFAEALHVLSTLMPKHQCLPNVVTYNCV 460


>gb|EAZ05114.1| hypothetical protein OsI_27306 [Oryza sativa Indica Group]
          Length = 737

 Score =  221 bits (564), Expect = 1e-55
 Identities = 105/242 (43%), Positives = 152/242 (62%), Gaps = 1/242 (0%)
 Frame = -3

Query: 723  NSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITF 544
            N SE L+ ++ MLQ GC PD+ T+N+V+HG CK G+ +EA  I++DML GKFC PDV+TF
Sbjct: 362  NPSEQLDVLVSMLQEGCKPDVITMNTVIHGFCKVGRAQEARRIVDDMLNGKFCAPDVVTF 421

Query: 543  SSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMR 367
            +++I G    G+  EAL +L   M +   LPN  TYN ++  L   G  D+A E ++EM+
Sbjct: 422  TTLISGYLGVGEFAEALHVLSTLMPKHQCLPNVVTYNCVLKGLLSLGLLDRAMEALEEMK 481

Query: 366  NHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLR 187
            +  + PD V+ T +  G C   + +K   FW NV+ PSG HDDYVY+++ R LCK GKL 
Sbjct: 482  SSNVIPDSVTHTVMIKGFCDAGELEKAKSFWDNVIWPSGMHDDYVYSAIFRGLCKLGKLE 541

Query: 186  EAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTIK 7
            +A D L EL+D   APG++ YN+++  ACK G  +   ++V  M+ N +  D  TW+ I 
Sbjct: 542  QACDFLYELVDSGVAPGVLCYNILVDAACKQGLKKLVYQLVKEMRRNGISPDAVTWRIID 601

Query: 6    LL 1
             L
Sbjct: 602  RL 603



 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
 Frame = -3

Query: 648 SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
           ++V   C  G       I  +M + +    DV  +S +I  L   GQ   A  I++ M +
Sbjct: 206 NLVQCLCIEGFFHIVFRIAEEMPQQRCGVADVFAYSQMIDSLCRSGQHHGASRIVYIMGK 265

Query: 468 DGLLPNNFTYNPIIHELCRAGKFD---KAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRK 298
            G+ P+  +YN I+H LC + K     +A++++ E       P +V++  + D LC+  +
Sbjct: 266 RGMYPSTVSYNCIVHGLCTSQKPGGRLRAYQLVMEGVRFRYHPREVTYKVLVDELCRENE 325

Query: 297 FDKGLEFWYNVVKPSGNHDDY--VYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVY 124
             K  +    ++K + + D    +Y   L  L       E  D+L  ++ E   P ++  
Sbjct: 326 LAKAKDVMELMLKVTPDDDTRTRIYNMFLAALRVVDNPSEQLDVLVSMLQEGCKPDVITM 385

Query: 123 NVVIHGACKLGSMRDALKIVDLMKENRLKA-DIATWQTI 10
           N VIHG CK+G  ++A +IVD M   +  A D+ T+ T+
Sbjct: 386 NTVIHGFCKVGRAQEARRIVDDMLNGKFCAPDVVTFTTL 424



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 57/240 (23%), Positives = 121/240 (50%), Gaps = 12/240 (5%)
 Frame = -3

Query: 693 KMLQNGC-TPDIYTLNSVVHGCCKAGQMEEANTILNDM-LEGKFCPPDVITFSSIIHGLS 520
           +M Q  C   D++  + ++   C++GQ   A+ I+  M   G +  P  ++++ I+HGL 
Sbjct: 226 EMPQQRCGVADVFAYSQMIDSLCRSGQHHGASRIVYIMGKRGMY--PSTVSYNCIVHGLC 283

Query: 519 NRGQTDEALEILHQMREDGLL----PNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLS 352
              +    L   +Q+  +G+     P   TY  ++ ELCR  +  KA +VM+ M    ++
Sbjct: 284 TSQKPGGRLR-AYQLVMEGVRFRYHPREVTYKVLVDELCRENELAKAKDVMELMLK--VT 340

Query: 351 PDKVSFTFVFD-GLCKNRKFD---KGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLRE 184
           PD  + T +++  L   R  D   + L+   ++++     D     +V+   CK G+ +E
Sbjct: 341 PDDDTRTRIYNMFLAALRVVDNPSEQLDVLVSMLQEGCKPDVITMNTVIHGFCKVGRAQE 400

Query: 183 AWDLLNELIDERF-APGIVVYNVVIHGACKLGSMRDALKIVD-LMKENRLKADIATWQTI 10
           A  +++++++ +F AP +V +  +I G   +G   +AL ++  LM +++   ++ T+  +
Sbjct: 401 ARRIVDDMLNGKFCAPDVVTFTTLISGYLGVGEFAEALHVLSTLMPKHQCLPNVVTYNCV 460


>gb|EMS62346.1| hypothetical protein TRIUR3_16010 [Triticum urartu]
          Length = 591

 Score =  220 bits (560), Expect = 4e-55
 Identities = 110/242 (45%), Positives = 153/242 (63%), Gaps = 1/242 (0%)
 Frame = -3

Query: 723 NSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITF 544
           N SE L+ ++ MLQ  C PD+ T+N+VVHG CK G+ +EA  IL+DM+ G+FC PDV+TF
Sbjct: 219 NPSEQLSVLVSMLQGDCKPDVITMNTVVHGFCKVGRTQEARKILDDMINGQFCAPDVVTF 278

Query: 543 SSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMR 367
           +++I G  N G+  EAL +LH  M      PN  TYN ++  L   G  D+A +V+DEM+
Sbjct: 279 TTLISGYLNVGEHAEALHVLHTLMPRRRCAPNVVTYNSVLKGLFCLGLVDRAMQVIDEMK 338

Query: 366 NHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLR 187
           ++ ++ D V+ T V  GLC   + +K   FW NVV PSG HD YVY+++LR LCK GKL 
Sbjct: 339 SNSITADSVTHTVVIKGLCNAGQLEKAKAFWDNVVWPSGIHDGYVYSAILRGLCKLGKLE 398

Query: 186 EAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTIK 7
           +A D L EL D    P +V YN+VI  ACK G  + A ++V  M+ N L  D  TW+ ++
Sbjct: 399 QACDFLYELADCGVCPSVVCYNIVIDTACKRGLKKLAYQLVKEMRRNGLSPDAVTWRILE 458

Query: 6   LL 1
            L
Sbjct: 459 KL 460



 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 11/224 (4%)
 Frame = -3

Query: 648 SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
           ++V   C  G       +  +M +     PD   ++ +I  L   GQ   A  I++ M +
Sbjct: 58  NLVQCLCVEGFFHIVFRVAEEMPQRHCLVPDEFVYAQMIDSLCRAGQHHGASRIVYIMGK 117

Query: 468 DGLLPNNFTYNPIIHELC---RAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRK 298
            GL P+  +YN I+H LC   + G   +A++++ E    G  P +V++  + + LC+ ++
Sbjct: 118 RGLCPSTLSYNCIVHGLCTSQKPGGRLRAYQLVMEGVRSGYRPREVTYKVLVEELCREKE 177

Query: 297 FDKGLEFWYNVVKPSGNHD-------DYVYASVLRLLCKAGKLREAWDLLNELIDERFAP 139
             K       +++P   HD         +Y   L  L       E   +L  ++     P
Sbjct: 178 LAKAKNVLELMLQPQCGHDKPDEETRTRLYNMFLGALRAVDNPSEQLSVLVSMLQGDCKP 237

Query: 138 GIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKA-DIATWQTI 10
            ++  N V+HG CK+G  ++A KI+D M   +  A D+ T+ T+
Sbjct: 238 DVITMNTVVHGFCKVGRTQEARKILDDMINGQFCAPDVVTFTTL 281



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 58/241 (24%), Positives = 108/241 (44%), Gaps = 13/241 (5%)
 Frame = -3

Query: 693 KMLQNGC-TPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGL-- 523
           +M Q  C  PD +    ++   C+AGQ   A+ I+  M +   C P  ++++ I+HGL  
Sbjct: 78  EMPQRHCLVPDEFVYAQMIDSLCRAGQHHGASRIVYIMGKRGLC-PSTLSYNCIVHGLCT 136

Query: 522 -SNRGQTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPD 346
               G    A +++ +    G  P   TY  ++ ELCR  +  KA  V++ M       D
Sbjct: 137 SQKPGGRLRAYQLVMEGVRSGYRPREVTYKVLVEELCREKELAKAKNVLELMLQPQCGHD 196

Query: 345 KVS-------FTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLR 187
           K         +      L       + L    ++++     D     +V+   CK G+ +
Sbjct: 197 KPDEETRTRLYNMFLGALRAVDNPSEQLSVLVSMLQGDCKPDVITMNTVVHGFCKVGRTQ 256

Query: 186 EAWDLLNELIDERF-APGIVVYNVVIHGACKLGSMRDALKIV-DLMKENRLKADIATWQT 13
           EA  +L+++I+ +F AP +V +  +I G   +G   +AL ++  LM   R   ++ T+ +
Sbjct: 257 EARKILDDMINGQFCAPDVVTFTTLISGYLNVGEHAEALHVLHTLMPRRRCAPNVVTYNS 316

Query: 12  I 10
           +
Sbjct: 317 V 317


>dbj|BAK00352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 729

 Score =  219 bits (559), Expect = 6e-55
 Identities = 110/242 (45%), Positives = 152/242 (62%), Gaps = 1/242 (0%)
 Frame = -3

Query: 723  NSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITF 544
            N SE L+ ++ MLQ  C PD+ T+N+VVHG CK G+ +EA  IL+DM+ GKFC PDV+TF
Sbjct: 359  NPSEQLSVLVSMLQGDCKPDVITMNTVVHGFCKVGRTQEARKILDDMINGKFCAPDVVTF 418

Query: 543  SSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMR 367
            +++I G  + G+  EAL +LH  M      PN  TYN ++  L   G  D+A +V+DEM+
Sbjct: 419  TTLISGYLDVGEHAEALHVLHTLMPRRRCAPNVVTYNSVLKGLFCLGLVDRAMQVLDEMK 478

Query: 366  NHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLR 187
               ++ D VS T V  GLC   + ++   FW NVV PSG HD YVY+++LR LCK GKL 
Sbjct: 479  LSSITADSVSHTVVIKGLCDAGQLEEAKAFWDNVVWPSGIHDGYVYSAILRGLCKLGKLE 538

Query: 186  EAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTIK 7
            +A D L EL D    P +V YN++I  ACK GS + A ++V  M+ N L  D  TW+ ++
Sbjct: 539  QACDFLYELADSGVCPSVVCYNILIDTACKQGSKKLAYQLVKEMRRNGLSPDAVTWRILE 598

Query: 6    LL 1
             L
Sbjct: 599  KL 600



 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 11/224 (4%)
 Frame = -3

Query: 648 SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
           ++V   C  G       +  +M + +   PD   ++ +I  L   GQ   A  I++ M +
Sbjct: 198 NLVQCLCGEGFFHIVFRVAEEMPQRRCLVPDEFAYAQMIDSLCRAGQHHGASRIVYVMGK 257

Query: 468 DGLLPNNFTYNPIIHELC---RAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRK 298
            GL P+  +YN I+H LC   + G   +A++++ E    G  P +V++  + + LC+ ++
Sbjct: 258 RGLRPSTLSYNCIVHGLCTSQKPGGRLRAYQLVMEGVRSGYRPREVTYKVLVEELCREKE 317

Query: 297 FDKGLEFWYNVVKPSGNHD-------DYVYASVLRLLCKAGKLREAWDLLNELIDERFAP 139
             K  +    +++P   HD         +Y   L  L       E   +L  ++     P
Sbjct: 318 LAKAKDILELMLQPQCGHDKADMETRTRLYNMFLGALRAVDNPSEQLSVLVSMLQGDCKP 377

Query: 138 GIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKA-DIATWQTI 10
            ++  N V+HG CK+G  ++A KI+D M   +  A D+ T+ T+
Sbjct: 378 DVITMNTVVHGFCKVGRTQEARKILDDMINGKFCAPDVVTFTTL 421



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 55/241 (22%), Positives = 109/241 (45%), Gaps = 13/241 (5%)
 Frame = -3

Query: 693 KMLQNGC-TPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGL-- 523
           +M Q  C  PD +    ++   C+AGQ   A+ I+  ++  +   P  ++++ I+HGL  
Sbjct: 218 EMPQRRCLVPDEFAYAQMIDSLCRAGQHHGASRIVY-VMGKRGLRPSTLSYNCIVHGLCT 276

Query: 522 -SNRGQTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPD 346
               G    A +++ +    G  P   TY  ++ ELCR  +  KA ++++ M       D
Sbjct: 277 SQKPGGRLRAYQLVMEGVRSGYRPREVTYKVLVEELCREKELAKAKDILELMLQPQCGHD 336

Query: 345 KVS-------FTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLR 187
           K         +      L       + L    ++++     D     +V+   CK G+ +
Sbjct: 337 KADMETRTRLYNMFLGALRAVDNPSEQLSVLVSMLQGDCKPDVITMNTVVHGFCKVGRTQ 396

Query: 186 EAWDLLNELIDERF-APGIVVYNVVIHGACKLGSMRDALKIV-DLMKENRLKADIATWQT 13
           EA  +L+++I+ +F AP +V +  +I G   +G   +AL ++  LM   R   ++ T+ +
Sbjct: 397 EARKILDDMINGKFCAPDVVTFTTLISGYLDVGEHAEALHVLHTLMPRRRCAPNVVTYNS 456

Query: 12  I 10
           +
Sbjct: 457 V 457


>gb|EMT11259.1| hypothetical protein F775_06295 [Aegilops tauschii]
          Length = 592

 Score =  219 bits (558), Expect = 7e-55
 Identities = 109/242 (45%), Positives = 151/242 (62%), Gaps = 1/242 (0%)
 Frame = -3

Query: 723 NSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITF 544
           N SE L  ++ MLQ  C PD+ T+N+V+HG CK G+ +EA  IL+DM+ GKFC PDV+TF
Sbjct: 219 NPSEQLGVLVSMLQGDCKPDVITMNTVIHGFCKVGRTQEARKILDDMINGKFCAPDVVTF 278

Query: 543 SSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMR 367
           +++I G  + G+  EAL +LH  M      PN  TYN ++  L   G  D+A +V+DEM+
Sbjct: 279 TTLISGYLDVGEHAEALHVLHTLMPRRRCSPNVVTYNSVLKGLFCLGLVDRAMQVLDEMK 338

Query: 366 NHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLR 187
           +  ++ D VS T V  GLC   + +K   FW NVV PSG HD YVY+++LR LCK GKL 
Sbjct: 339 SSSITADSVSHTVVIKGLCDAGQLEKAKAFWDNVVWPSGIHDGYVYSAILRGLCKLGKLE 398

Query: 186 EAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTIK 7
           +A D L EL D    P +V YN++I  ACK G  + A ++V  M+ N L  D  TW+ ++
Sbjct: 399 QACDFLYELADSGVCPSVVCYNILIDTACKQGLKKLAYQLVKEMRRNGLSPDAVTWRILE 458

Query: 6   LL 1
            L
Sbjct: 459 KL 460



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 11/224 (4%)
 Frame = -3

Query: 648 SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
           ++V   C  G       +  +M + +   PD   ++ +I  L   GQ   A  I++ M +
Sbjct: 58  NLVQCLCGEGFFHIVFRVAEEMPQRRCFVPDEFAYAQMIDSLCRAGQHHGASRIVYIMGK 117

Query: 468 DGLLPNNFTYNPIIHELC---RAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRK 298
            GL P+  +YN I+H LC   + G   +A++++ E    G  P +V++  + + LC+ ++
Sbjct: 118 RGLCPSTLSYNCIVHGLCTSQKPGGRLRAYQLVMEGVRSGYRPREVTYKVLVEELCREKE 177

Query: 297 FDKGLEFWYNVVKPSGNHD-------DYVYASVLRLLCKAGKLREAWDLLNELIDERFAP 139
             K  +    +++P   HD         +Y   L  L       E   +L  ++     P
Sbjct: 178 VAKAKDVLELMLQPQCGHDKPDEETRTRLYNMFLGALRAVDNPSEQLGVLVSMLQGDCKP 237

Query: 138 GIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKA-DIATWQTI 10
            ++  N VIHG CK+G  ++A KI+D M   +  A D+ T+ T+
Sbjct: 238 DVITMNTVIHGFCKVGRTQEARKILDDMINGKFCAPDVVTFTTL 281



 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 13/241 (5%)
 Frame = -3

Query: 693 KMLQNGC-TPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGL-- 523
           +M Q  C  PD +    ++   C+AGQ   A+ I+  M +   C P  ++++ I+HGL  
Sbjct: 78  EMPQRRCFVPDEFAYAQMIDSLCRAGQHHGASRIVYIMGKRGLC-PSTLSYNCIVHGLCT 136

Query: 522 -SNRGQTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPD 346
               G    A +++ +    G  P   TY  ++ ELCR  +  KA +V++ M       D
Sbjct: 137 SQKPGGRLRAYQLVMEGVRSGYRPREVTYKVLVEELCREKEVAKAKDVLELMLQPQCGHD 196

Query: 345 KVS-------FTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLR 187
           K         +      L       + L    ++++     D     +V+   CK G+ +
Sbjct: 197 KPDEETRTRLYNMFLGALRAVDNPSEQLGVLVSMLQGDCKPDVITMNTVIHGFCKVGRTQ 256

Query: 186 EAWDLLNELIDERF-APGIVVYNVVIHGACKLGSMRDALKIV-DLMKENRLKADIATWQT 13
           EA  +L+++I+ +F AP +V +  +I G   +G   +AL ++  LM   R   ++ T+ +
Sbjct: 257 EARKILDDMINGKFCAPDVVTFTTLISGYLDVGEHAEALHVLHTLMPRRRCSPNVVTYNS 316

Query: 12  I 10
           +
Sbjct: 317 V 317


>gb|EMJ10134.1| hypothetical protein PRUPE_ppb014337mg, partial [Prunus persica]
          Length = 681

 Score =  218 bits (556), Expect = 1e-54
 Identities = 104/244 (42%), Positives = 160/244 (65%), Gaps = 1/244 (0%)
 Frame = -3

Query: 729  LKNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVI 550
            + N++ELLN ++ MLQ  C PD+ TLN VV+G CK G++E+A+ +LNDM+ GKFC PDV+
Sbjct: 417  MNNTTELLNGLVSMLQTQCQPDVITLNIVVNGLCKMGRIEDASKVLNDMMTGKFCAPDVV 476

Query: 549  TFSSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDE 373
            TF+++I GL N G+T+EAL +LH  M E G  PN  TYN ++  L +  +  +A E+ + 
Sbjct: 477  TFTTMISGLLNVGRTEEALGLLHHVMPEKGFSPNVVTYNAVLRGLFKHKQAREAMELFNL 536

Query: 372  MRNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGK 193
            M + G++ D  ++T + DGLC + + ++   FW  V+ PS  HD++VYA++++ +C +GK
Sbjct: 537  MVSDGVAADSTTYTIIIDGLCDSDQIEEAKRFWDEVIWPSKIHDNFVYAAIIKGICHSGK 596

Query: 192  LREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQT 13
              EA   L EL+D   +P I  YN+VI  ACKLG  ++A ++V  M+ N L  D  TW+ 
Sbjct: 597  FDEACHFLYELVDAGVSPNIYSYNIVIDAACKLGLKKEAYEVVKEMRRNGLAPDSVTWRI 656

Query: 12   IKLL 1
            +  L
Sbjct: 657  LDKL 660



 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
 Frame = -3

Query: 648 SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
           S++   C+ G  +E   I  DM +GK    D   +  +I  L   G+   A  I++ MR 
Sbjct: 269 SLIDSMCREGYFQEVFGIAEDMPQGKSVNED-FAYGQMIDSLCKAGRHHGASRIVYIMRN 327

Query: 468 DGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRKFDK 289
            G  P   +YN I+H L + G   +A+++++E    G  P + ++  + +GLC+     K
Sbjct: 328 AGFAPKLTSYNSILHGLSKEGGCMRAYQLLEEGIKFGYFPSEYTYKVLVEGLCQESDPHK 387

Query: 288 GLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVYNVVIH 109
             E  + ++   G     +Y   LR LC      E  + L  ++  +  P ++  N+V++
Sbjct: 388 AREVLHYMLSKEGVDRTRMYNMYLRALCLMNNTTELLNGLVSMLQTQCQPDVITLNIVVN 447

Query: 108 GACKLGSMRDALKIV-DLMKENRLKADIATWQTI 10
           G CK+G + DA K++ D+M       D+ T+ T+
Sbjct: 448 GLCKMGRIEDASKVLNDMMTGKFCAPDVVTFTTM 481



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 55/281 (19%), Positives = 111/281 (39%), Gaps = 42/281 (14%)
 Frame = -3

Query: 726 KNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVIT 547
           +N  + L+ + ++   G  PD   L+S++H  C + +  EA+      +    C PD  T
Sbjct: 61  RNVDQALHLLDRLRLLGYRPDSLNLSSILHALCDSNRFAEAHHRFAHSIASD-CVPDERT 119

Query: 546 FSSIIHGLSNRGQTDEALEILHQ------------------------------------- 478
            + I+  L +       L +LH+                                     
Sbjct: 120 CNVIVARLLDSRTPHTTLRLLHRLSHVKPEFVPSLINYNRLMDQLCLLLRPWEAHRVFFD 179

Query: 477 MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRK 298
           M   G  PN  +Y  +I+  C  G+   A +V DEM   G++P+ ++++ +  G+ + R 
Sbjct: 180 MLSKGHCPNAVSYTTLINGYCLIGELGDAQKVFDEMGEKGVAPNSLTYSVMIRGVLRKRD 239

Query: 297 FDKGLEFWYNVVKPSGNHDD-----YVYASVLRLLCKAGKLREAWDLLNELIDERFAPGI 133
             +  E+   + +     DD       +AS++  +C+ G  +E + +  ++   +     
Sbjct: 240 VGRAKEWMGKLWEIMKGEDDTTVKSAAFASLIDSMCREGYFQEVFGIAEDMPQGKSVNED 299

Query: 132 VVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTI 10
             Y  +I   CK G    A +IV +M+       + ++ +I
Sbjct: 300 FAYGQMIDSLCKAGRHHGASRIVYIMRNAGFAPKLTSYNSI 340


>ref|XP_003562458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020-like
            [Brachypodium distachyon]
          Length = 737

 Score =  218 bits (556), Expect = 1e-54
 Identities = 109/244 (44%), Positives = 152/244 (62%), Gaps = 1/244 (0%)
 Frame = -3

Query: 729  LKNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVI 550
            ++N SE L  ++ MLQ  C PD+ T+N+VVHG CK G+ +EA  IL+DM+ GKFCPPDV+
Sbjct: 362  VENPSEQLGVLMSMLQEECAPDVITMNTVVHGFCKVGRAQEARRILDDMINGKFCPPDVV 421

Query: 549  TFSSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDE 373
            TF+++I G  + G+  EAL +LH  M      PN  TYN ++  L   G  D A +V+DE
Sbjct: 422  TFTTLISGYLDVGEHAEALNVLHTLMPRRRCSPNIVTYNSVLKGLFCLGLVDSAMQVIDE 481

Query: 372  MRNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGK 193
            M+ + +  D V+ T V  GLC   + +K   FW NVV PSG HD YVY+++ R LCK GK
Sbjct: 482  MKLNNVVADSVTHTVVIKGLCDAGQLEKAKGFWDNVVWPSGIHDGYVYSAIFRGLCKLGK 541

Query: 192  LREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQT 13
            L +A D L EL+D    PG+V YN+++  ACK G  + A ++V  M+ N L  D  TW+ 
Sbjct: 542  LEQACDFLYELVDSGVFPGVVCYNILVDTACKQGMKKLAYQLVKEMRRNGLSPDAVTWRI 601

Query: 12   IKLL 1
            +  L
Sbjct: 602  LDKL 605



 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 52/223 (23%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
 Frame = -3

Query: 645 VVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRED 466
           ++   C  G       + ++M + +   PD   ++ ++  L   GQ   A  I++ M + 
Sbjct: 204 LLQSLCAEGFFHVVFHVADEMPQRRCRVPDEFVYAQMVDSLCRAGQHHGASRIVYVMGKR 263

Query: 465 GLLPNNFTYNPIIHELC---RAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRKF 295
           G+ P+  +YN I+H LC   + G   +A++++ E  + G  P +V++  + + LC+ ++ 
Sbjct: 264 GVCPSTVSYNCIVHGLCTSQKPGGRLRAYQLVMEGVHFGYRPREVTYKVLVEELCREKEV 323

Query: 294 DKGLEFWYNVVKPSGNHD-------DYVYASVLRLLCKAGKLREAWDLLNELIDERFAPG 136
            K  +    +++P   +D         +Y   L  L       E   +L  ++ E  AP 
Sbjct: 324 AKAKDVLELMLQPHCAYDKPDDETRTRLYNMFLGALHAVENPSEQLGVLMSMLQEECAPD 383

Query: 135 IVVYNVVIHGACKLGSMRDALKIVDLMKENRL-KADIATWQTI 10
           ++  N V+HG CK+G  ++A +I+D M   +    D+ T+ T+
Sbjct: 384 VITMNTVVHGFCKVGRAQEARRILDDMINGKFCPPDVVTFTTL 426



 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 19/247 (7%)
 Frame = -3

Query: 693 KMLQNGC-TPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGL-- 523
           +M Q  C  PD +    +V   C+AGQ   A+ I+  M +   C P  ++++ I+HGL  
Sbjct: 223 EMPQRRCRVPDEFVYAQMVDSLCRAGQHHGASRIVYVMGKRGVC-PSTVSYNCIVHGLCT 281

Query: 522 -SNRGQTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPD 346
               G    A +++ +    G  P   TY  ++ ELCR  +  KA +V++ M     + D
Sbjct: 282 SQKPGGRLRAYQLVMEGVHFGYRPREVTYKVLVEELCREKEVAKAKDVLELMLQPHCAYD 341

Query: 345 KVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGN-------------HDDYVYASVLRLLC 205
           K       D   + R ++  L   + V  PS                D     +V+   C
Sbjct: 342 KP------DDETRTRLYNMFLGALHAVENPSEQLGVLMSMLQEECAPDVITMNTVVHGFC 395

Query: 204 KAGKLREAWDLLNELIDERFA-PGIVVYNVVIHGACKLGSMRDALKIV-DLMKENRLKAD 31
           K G+ +EA  +L+++I+ +F  P +V +  +I G   +G   +AL ++  LM   R   +
Sbjct: 396 KVGRAQEARRILDDMINGKFCPPDVVTFTTLISGYLDVGEHAEALNVLHTLMPRRRCSPN 455

Query: 30  IATWQTI 10
           I T+ ++
Sbjct: 456 IVTYNSV 462


>ref|XP_002322098.1| hypothetical protein POPTR_0015s04490g [Populus trichocarpa]
            gi|222869094|gb|EEF06225.1| hypothetical protein
            POPTR_0015s04490g [Populus trichocarpa]
          Length = 668

 Score =  218 bits (555), Expect = 2e-54
 Identities = 107/243 (44%), Positives = 155/243 (63%)
 Frame = -3

Query: 729  LKNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVI 550
            + N +ELLN ++ MLQ  C PD+ TLN+V++G CK G++EEA  +LNDM+ GKF  PD +
Sbjct: 420  MNNPTELLNVLVSMLQTNCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPDAV 479

Query: 549  TFSSIIHGLSNRGQTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEM 370
            TF+SII GL N G++ EA  +L QM E G+ P   TYN I+  L +     +A  V DEM
Sbjct: 480  TFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVVTYNAILRGLFKLQLTKEAMAVFDEM 539

Query: 369  RNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKL 190
               G++ +  +++ + +GLC++ + D   +FW  V+ PS  HDD+VYA++L+ LC++G L
Sbjct: 540  ITDGVAANSQTYSIIVEGLCESGQIDGAKKFWDEVIWPSKIHDDFVYAAILKGLCRSGHL 599

Query: 189  REAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTI 10
             EA   L EL+D    P IV YN+VI  AC LG  R+A +I   M++N L  D  TW+T+
Sbjct: 600  NEAIHFLYELVDSGVNPNIVSYNIVIDRACSLGMKREAYQIAGEMQKNGLTPDAVTWRTL 659

Query: 9    KLL 1
              L
Sbjct: 660  DKL 662



 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 58/243 (23%), Positives = 117/243 (48%), Gaps = 3/243 (1%)
 Frame = -3

Query: 729 LKNSSELLNTMIKMLQNGCTPDIYT--LNSVVHGCCKAGQMEEANTILNDMLEGKFCPPD 556
           ++   EL++ + + +++     + +   +++V   C+ G   E   I  +M +G     D
Sbjct: 243 IERGRELMHVLFQRMRHEEDQSVNSAAFDNLVDCLCREGLFNEVFMIAEEMPQGNRVNED 302

Query: 555 VITFSSIIHGLSNRGQTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMD 376
              +  +I  L   G++  A  +++ MR+ G  P+  +YN IIH LC+ G   +A+++++
Sbjct: 303 -FAYGHLIDSLCKVGRSHGASRVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLE 361

Query: 375 EMRNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAG 196
           E    G    + ++  + + LC+    DK  E    ++   G     +Y   LR LC   
Sbjct: 362 EGVGFGYLLSEYTYKVLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRALCLMN 421

Query: 195 KLREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKA-DIATW 19
              E  ++L  ++     P ++  N VI+G CK+G + +ALK+++ M   +  A D  T+
Sbjct: 422 NPTELLNVLVSMLQTNCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPDAVTF 481

Query: 18  QTI 10
            +I
Sbjct: 482 TSI 484



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 65/299 (21%), Positives = 118/299 (39%), Gaps = 77/299 (25%)
 Frame = -3

Query: 726 KNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVIT 547
           +N  E L  +  +   G  PD   L+S++HG C A +  EA+  L   L    C PD  T
Sbjct: 64  RNVDEALRLLDHLRLRGYLPDSLNLSSIIHGLCDANRFNEAHQRLIIFLT-SLCVPDERT 122

Query: 546 FSSIIHGLSNRGQTDEALEILHQMRE--DGLLPNNFTYNPIIHELC-------------- 415
            + ++  L +       L ++H++ E     +P+   YN +I + C              
Sbjct: 123 CNVLVARLLHSKDPFRTLNVIHRLIEFKPEFVPSLINYNRLIDQFCSVSLPNVAHRMLYD 182

Query: 414 ---------------------RAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRK 298
                                + G+   A+++ DEM   G+ P+ +S++ +  G+ + R 
Sbjct: 183 MINRGHCPSIVSYTTLVNGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLLIRGVLRKRD 242

Query: 297 FDKGLEFWY--------------------NVV------------------KPSGN--HDD 238
            ++G E  +                    N+V                   P GN  ++D
Sbjct: 243 IERGRELMHVLFQRMRHEEDQSVNSAAFDNLVDCLCREGLFNEVFMIAEEMPQGNRVNED 302

Query: 237 YVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVD 61
           + Y  ++  LCK G+   A  ++  +  + F P +V YN +IHG CK G    A ++++
Sbjct: 303 FAYGHLIDSLCKVGRSHGASRVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLE 361



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
 Frame = -3

Query: 534 IHGLSNRGQT-DEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHG 358
           IH L  + +  DEAL +L  +R  G LP++   + IIH LC A +F++A + +       
Sbjct: 56  IHDLCTKHRNVDEALRLLDHLRLRGYLPDSLNLSSIIHGLCDANRFNEAHQRLIIFLTSL 115

Query: 357 LSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVV--KPSGNHDDYVYASVLRLLCKAGKLRE 184
             PD+ +   +   L  ++   + L   + ++  KP        Y  ++   C       
Sbjct: 116 CVPDERTCNVLVARLLHSKDPFRTLNVIHRLIEFKPEFVPSLINYNRLIDQFCSVSLPNV 175

Query: 183 AWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKE 49
           A  +L ++I+    P IV Y  +++G  K+G + DA K+ D M E
Sbjct: 176 AHRMLYDMINRGHCPSIVSYTTLVNGYSKIGEISDAYKLFDEMPE 220


>ref|XP_004236430.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020-like
            [Solanum lycopersicum]
          Length = 676

 Score =  218 bits (554), Expect = 2e-54
 Identities = 107/242 (44%), Positives = 158/242 (65%), Gaps = 1/242 (0%)
 Frame = -3

Query: 723  NSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITF 544
            N +ELLN ++ MLQ  C PD+ TLN+V++G CK G++EEA  +  DM+ GKFC P+ +TF
Sbjct: 420  NPTELLNVLVTMLQTQCQPDVITLNTVINGFCKMGRIEEAQKVFKDMMMGKFCAPNGVTF 479

Query: 543  SSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMR 367
            +++I G    G+ +EALE+LH+ M E GL PN  TYN +I  L +  + D+A EV   M 
Sbjct: 480  TTVISGFLKLGRVEEALELLHRVMPEKGLKPNVVTYNAVIQGLFKLHRIDEAMEVFHSMV 539

Query: 366  NHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLR 187
            + G+  D  ++T + DGL ++ K D+   FW +VV PS  HD Y+YA++L+ LC++GKL 
Sbjct: 540  SGGIVADCTTYTVIIDGLFESNKVDEAKRFWNDVVWPSKVHDSYIYAAILKGLCRSGKLH 599

Query: 186  EAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTIK 7
            +A D L EL D      +V YN+VI+GAC LG  R+A +I+  M++N L+ D  TW+ + 
Sbjct: 600  DACDFLYELADCGVTLCVVNYNIVINGACTLGWKREAYQILGEMRKNGLEPDAVTWRILD 659

Query: 6    LL 1
             L
Sbjct: 660  KL 661



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 1/214 (0%)
 Frame = -3

Query: 648 SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
           +V++  CK G   E   I  DM +GK    D + ++ +I  L   G+ + A  I++ +R+
Sbjct: 270 NVINCLCKEGFFHEVFNIAEDMPQGKSVVQDFV-YAQMIDSLCRFGRYNGAARIVYMIRK 328

Query: 468 DGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRKFDK 289
            G  P+  +YN I+H L + G   +A+++++E    G  P + ++  + +GLC      K
Sbjct: 329 RGFDPSLVSYNTIVHGLVKEGDCFRAYQLLEEGIQFGYLPSEFTYKLLVEGLCYVNDLVK 388

Query: 288 GLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVYNVVIH 109
             E    ++    N    +Y   LR LC      E  ++L  ++  +  P ++  N VI+
Sbjct: 389 ANEVVNMMLYKKDNDKTRIYNIYLRALCVVDNPTELLNVLVTMLQTQCQPDVITLNTVIN 448

Query: 108 GACKLGSMRDALKIV-DLMKENRLKADIATWQTI 10
           G CK+G + +A K+  D+M       +  T+ T+
Sbjct: 449 GFCKMGRIEEAQKVFKDMMMGKFCAPNGVTFTTV 482



 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 50/230 (21%), Positives = 109/230 (47%), Gaps = 5/230 (2%)
 Frame = -3

Query: 729 LKNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVI 550
           L+ + +     + M + G +P+  +  +++ G C AG++ EA  + ++M E     P+ +
Sbjct: 168 LERNRDAHQLFVDMRKRGHSPNAVSYTTLIDGYCGAGEVGEAEKLFDEMSECGVI-PNAL 226

Query: 549 TFSSIIHGLSNRGQTDEALEILHQ-----MREDGLLPNNFTYNPIIHELCRAGKFDKAFE 385
           T+S++I G+  +   D   +++ +     + ED +  NN  +  +I+ LC+ G F + F 
Sbjct: 227 TYSALIRGILRKRDIDHGKQLIRKLWDVMLTEDDMHVNNAAFCNVINCLCKEGFFHEVFN 286

Query: 384 VMDEMRNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLC 205
           + ++M           +  + D LC+  +++      Y + K   +     Y +++  L 
Sbjct: 287 IAEDMPQGKSVVQDFVYAQMIDSLCRFGRYNGAARIVYMIRKRGFDPSLVSYNTIVHGLV 346

Query: 204 KAGKLREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLM 55
           K G    A+ LL E I   + P    Y +++ G C +  +  A ++V++M
Sbjct: 347 KEGDCFRAYQLLEEGIQFGYLPSEFTYKLLVEGLCYVNDLVKANEVVNMM 396



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 58/277 (20%), Positives = 112/277 (40%), Gaps = 42/277 (15%)
 Frame = -3

Query: 714 ELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSI 535
           E L  + ++   G  PD   L+S+VH  C + +  EA+      +  +   PD  T + +
Sbjct: 65  EALRLLDELRLQGYHPDSLNLSSIVHALCDSKRFSEAHRRFLLAVSSQSTVPDERTCNVL 124

Query: 534 IHGLSNRGQTDEALEILHQM--REDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNH 361
           I  L       E + ++  +  ++   +P+   YN +IH+LC   +   A ++  +MR  
Sbjct: 125 IARLLYAANPQETVRVISALFYQKPQFVPSLMNYNRLIHQLCTLERNRDAHQLFVDMRKR 184

Query: 360 GLSPDKVSFTFVFDGLC-----------------------------------KNRKFDKG 286
           G SP+ VS+T + DG C                                   + R  D G
Sbjct: 185 GHSPNAVSYTTLIDGYCGAGEVGEAEKLFDEMSECGVIPNALTYSALIRGILRKRDIDHG 244

Query: 285 LE----FWYNVVKPSGNH-DDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVYN 121
            +     W  ++     H ++  + +V+  LCK G   E +++  ++   +      VY 
Sbjct: 245 KQLIRKLWDVMLTEDDMHVNNAAFCNVINCLCKEGFFHEVFNIAEDMPQGKSVVQDFVYA 304

Query: 120 VVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTI 10
            +I   C+ G    A +IV ++++      + ++ TI
Sbjct: 305 QMIDSLCRFGRYNGAARIVYMIRKRGFDPSLVSYNTI 341


>ref|XP_002463378.1| hypothetical protein SORBIDRAFT_02g042720 [Sorghum bicolor]
            gi|241926755|gb|EER99899.1| hypothetical protein
            SORBIDRAFT_02g042720 [Sorghum bicolor]
          Length = 782

 Score =  218 bits (554), Expect = 2e-54
 Identities = 109/242 (45%), Positives = 151/242 (62%), Gaps = 1/242 (0%)
 Frame = -3

Query: 723  NSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITF 544
            N SE L  ++ MLQ GC PD+ T+N+V+HG CK+G+ +EA  I++DML GKFC PDV+TF
Sbjct: 394  NPSEQLGVLVSMLQAGCKPDVITMNTVIHGFCKSGRTQEARRIMDDMLSGKFCAPDVVTF 453

Query: 543  SSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMR 367
            +++I G    G   EAL++LH  M      P   TYN ++  L   G+ D A +V++EM 
Sbjct: 454  TTLISGYLGAGDHAEALDVLHNLMPRRRCSPTVVTYNCVLKGLFGIGQVDTAMQVLEEMS 513

Query: 366  NHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLR 187
             + +  D V++T V  GLC     +K  EFW NVV PSG HDDYVY+++ + LCK  KL 
Sbjct: 514  ANKIVADSVTYTVVIKGLCDAGLLEKAKEFWDNVVWPSGIHDDYVYSAIFKGLCKQKKLE 573

Query: 186  EAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTIK 7
            +A D L EL+D   AP +V YN++I  ACK GS + A ++V  MK N L  D  TW+ + 
Sbjct: 574  QACDFLYELVDCGVAPSVVCYNILIDAACKQGSNKLAYQLVKEMKRNGLAPDAVTWRILS 633

Query: 6    LL 1
             L
Sbjct: 634  KL 635


>ref|XP_006341533.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020-like
            [Solanum tuberosum]
          Length = 680

 Score =  217 bits (553), Expect = 3e-54
 Identities = 106/242 (43%), Positives = 158/242 (65%), Gaps = 1/242 (0%)
 Frame = -3

Query: 723  NSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITF 544
            N +ELLN ++ MLQ  C PD+ TLN+V++G CK G++EEA  +  DM+  KFC PD +TF
Sbjct: 420  NPTELLNVLVTMLQTQCQPDVITLNTVINGFCKMGRIEEAQKVFKDMMMEKFCAPDGVTF 479

Query: 543  SSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMR 367
            +++I G    G+ +EALE+LH+ M E GL PN  TYN +I  L +  + D+A EV   M 
Sbjct: 480  TTVISGFLKLGRVEEALELLHRVMPEKGLKPNVVTYNAVIQGLFKLHRIDEAMEVFHSML 539

Query: 366  NHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLR 187
            + G+  D  ++T + DGL ++ K D+   FW +VV PS  HD Y+YA++L+ LC++GKL 
Sbjct: 540  SGGIVADCTTYTVIIDGLFESNKVDEAKSFWNDVVWPSKVHDSYIYAAILKGLCRSGKLH 599

Query: 186  EAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTIK 7
            +A D L EL+D      ++ YN+VI+GAC LG  R+A +I+  M++N L+ D  TW+ + 
Sbjct: 600  DACDFLYELVDCGVPLCVINYNIVINGACTLGWKREAYQILGEMRKNGLEPDSVTWRILD 659

Query: 6    LL 1
             L
Sbjct: 660  KL 661



 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
 Frame = -3

Query: 648 SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
           +V++  C+ G   E   I+ DM +GK    D + ++ +I  L   G+ + A  I++ MR+
Sbjct: 270 NVINCLCREGFFHEVFNIVEDMPQGKSVFQDFV-YAQMIDSLCRFGRYNGAARIVYIMRK 328

Query: 468 DGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRKFDK 289
            G  P+  +YN I+H L + G   +A+++++E    G  P + ++  + +GLC      K
Sbjct: 329 RGFDPSLVSYNTIVHGLVKEGDCFRAYQLLEEGIQFGYLPSEFTYKLLVEGLCHVNDLVK 388

Query: 288 GLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVYNVVIH 109
             E    ++    N    +Y   LR LC      E  ++L  ++  +  P ++  N VI+
Sbjct: 389 AKEIVNMMLNKKDNDKTRIYNIYLRALCVVDNPTELLNVLVTMLQTQCQPDVITLNTVIN 448

Query: 108 GACKLGSMRDALKIV-DLMKENRLKADIATWQTI 10
           G CK+G + +A K+  D+M E     D  T+ T+
Sbjct: 449 GFCKMGRIEEAQKVFKDMMMEKFCAPDGVTFTTV 482



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 58/280 (20%), Positives = 112/280 (40%), Gaps = 42/280 (15%)
 Frame = -3

Query: 723 NSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITF 544
           N  E L  +  +   G  PD   L+S+VH  C + +  EA+      +  +   PD  T 
Sbjct: 62  NVDEALRLLDGLRLQGYHPDSLNLSSIVHALCDSHRFSEAHQRFLLAVSSQSTVPDERTC 121

Query: 543 SSIIHGLSNRGQTDEALEILHQM--REDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEM 370
           + +I  L       E++ ++  +  ++   +P+   YN +IH+LC   +   A ++  +M
Sbjct: 122 NVLIARLLYAATPQESVRVISALFYQKPQFVPSLMNYNRLIHQLCTLERNRDAHQLFVDM 181

Query: 369 RNHGLSPDKVSFTFVFDGLC-----------------------------------KNRKF 295
           R  G SP+ VS+T +  G C                                   + R  
Sbjct: 182 RKRGHSPNAVSYTTLICGYCGVGEVREAEKLFAEMSECGVIPNALTYSALIRGILRKRGI 241

Query: 294 DKGLE----FWYNVVKPSGNH-DDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIV 130
           D G +     W  +      H ++  + +V+  LC+ G   E ++++ ++   +      
Sbjct: 242 DHGKQLIGKLWSVMRTEEDMHINNAAFCNVINCLCREGFFHEVFNIVEDMPQGKSVFQDF 301

Query: 129 VYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTI 10
           VY  +I   C+ G    A +IV +M++      + ++ TI
Sbjct: 302 VYAQMIDSLCRFGRYNGAARIVYIMRKRGFDPSLVSYNTI 341


>ref|XP_004959886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020-like
            [Setaria italica]
          Length = 754

 Score =  216 bits (551), Expect = 5e-54
 Identities = 108/241 (44%), Positives = 150/241 (62%), Gaps = 1/241 (0%)
 Frame = -3

Query: 729  LKNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVI 550
            + N SE L  ++ MLQ GC PD+ T+N+V+HG CK+G+ +EA  ILNDML GKFC PDV+
Sbjct: 372  MDNPSEQLGVLVSMLQAGCKPDVITMNTVIHGFCKSGRAQEARRILNDMLNGKFCAPDVV 431

Query: 549  TFSSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDE 373
            TF+++I G  + G   EAL +LH  M      P   TYN ++  L   G+ D A +V+++
Sbjct: 432  TFTTLISGYLDAGDHAEALNVLHTLMPRRRCSPTVVTYNCVLKGLFGHGQVDTAMQVLED 491

Query: 372  MRNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGK 193
            M  + ++ D V+ T V  GLC   + +K  E W NVV PSG HD+YVY+++ R LCK  K
Sbjct: 492  MNANNVAADSVTHTVVIKGLCDVGQLEKAKELWDNVVWPSGIHDEYVYSAIFRGLCKHRK 551

Query: 192  LREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQT 13
            L +A D L EL+D   APG+V YN++I  ACK G  + A  +V  MK N L  D  TW+ 
Sbjct: 552  LEQACDFLYELVDCGVAPGVVCYNILIDAACKQGLKKQAYLLVKEMKRNGLTPDAVTWRI 611

Query: 12   I 10
            +
Sbjct: 612  L 612



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 16/229 (6%)
 Frame = -3

Query: 648 SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
           ++V   C  G       I  +M + +    D   ++ +I  L   GQ   A  I++ MR+
Sbjct: 208 NLVQCLCDEGFFHVVFRIAEEMPQRRCHVADEFAYAQMIDSLCRSGQHHGASRIVYIMRK 267

Query: 468 DGLLPNNFTYNPIIHELC---RAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRK 298
            GL P+  +YN I+H LC   + G   +A +++ E    G  P +V++  + D LC+  +
Sbjct: 268 RGLCPSAVSYNCIVHGLCTSPKPGACLRAHQLVMEGTLFGYRPREVTYKVLVDKLCRENE 327

Query: 297 FDKG---LEFWYNVVKPSGNHD---------DYVYASVLRLLCKAGKLREAWDLLNELID 154
             K    LE         G  +           +Y   L  L       E   +L  ++ 
Sbjct: 328 LAKAKDVLELMLQHTIQCGQDEGGDAGDETRTRIYNVFLGALRAMDNPSEQLGVLVSMLQ 387

Query: 153 ERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKA-DIATWQTI 10
               P ++  N VIHG CK G  ++A +I++ M   +  A D+ T+ T+
Sbjct: 388 AGCKPDVITMNTVIHGFCKSGRAQEARRILNDMLNGKFCAPDVVTFTTL 436


>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  216 bits (551), Expect = 5e-54
 Identities = 106/244 (43%), Positives = 164/244 (67%), Gaps = 1/244 (0%)
 Frame = -3

Query: 729  LKNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVI 550
            + N +ELLN ++ MLQ  C PD+ TLN+V++G CK G++EEA  +L+DM+ GKFC PD +
Sbjct: 663  MNNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRVEEALKVLDDMVMGKFCAPDSV 722

Query: 549  TFSSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDE 373
            T+++II GL N G+T+EAL++L + M E G  P   T+N ++H L +  + + A EV + 
Sbjct: 723  TYTTIICGLLNLGRTEEALDVLRRVMPEKGFKPGVVTFNAVLHGLFKLQQANVATEVFNS 782

Query: 372  MRNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGK 193
            M + G++ + +++T + DGL ++ + D+   FW +V+ PS  HD++VYA++L+ LC++GK
Sbjct: 783  MVSDGVAANTITYTIIIDGLFESDQIDEAKRFWDDVIWPSKVHDNFVYAAILKGLCRSGK 842

Query: 192  LREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQT 13
            L EA D L EL+D      +V YN++I  ACKLGS R+A  IV  MK+N L  D  TW+ 
Sbjct: 843  LNEACDFLYELVDCGVTLNVVNYNILIDHACKLGSKREAYTIVQEMKKNGLTPDAVTWRI 902

Query: 12   IKLL 1
            +  L
Sbjct: 903  LHKL 906



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
 Frame = -3

Query: 648  SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
            +++   CK G   E   I  DM +GK    + + +  +I  L   G+   A  I++ MR+
Sbjct: 515  NLIDSLCKEGFFLEVFRIAEDMPQGKSVSEEFV-YGQMIDSLCRCGRNHGASRIVYIMRK 573

Query: 468  DGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRKFDK 289
             G  P+  +YN I+H L + G   +A++++ E    G    + ++  + + LC++    K
Sbjct: 574  RGFFPSLVSYNYIVHGLSKEGGCMRAYQLLKEGVEFGYMMSEHTYKVLLEALCRDADLCK 633

Query: 288  GLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVYNVVIH 109
              E    ++   G     +Y   LR LC      E  ++L  ++  +  P ++  N VI+
Sbjct: 634  AREVMQLMLNKEGVDQTRIYNIYLRALCLMNNPTELLNVLVFMLQTQCQPDVITLNTVIN 693

Query: 108  GACKLGSMRDALKIVDLMKENRLKA-DIATWQTI 10
            G CK+G + +ALK++D M   +  A D  T+ TI
Sbjct: 694  GFCKMGRVEEALKVLDDMVMGKFCAPDSVTYTTI 727



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 43/282 (15%)
 Frame = -3

Query: 726  KNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEA------------------- 604
            +N  E L  +  +   G  PD   L+S++H  C A +  EA                   
Sbjct: 307  RNVDEALRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSEAHHRLLLSFASHCVPDQRTC 366

Query: 603  NTILNDMLEGKF-----------------CPPDVITFSSIIHGLSNRGQTDEALEILHQM 475
            N ++  +L+ +                    P +I ++ +IH L +  Q +EA  +   M
Sbjct: 367  NVLIARLLDSRTPHATLHVFRGLIAARPEFVPSLINYNRLIHQLCSFSQPNEAHGLFFDM 426

Query: 474  REDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRKF 295
            R  G  PN  +Y  +I   C+ G+   A+++ DEM   G+ P+ ++++ +  G+   R  
Sbjct: 427  RSRGHCPNAVSYTTLIDGYCKIGEETSAWKLFDEMLESGVVPNSLTYSVLLKGVLCKRDV 486

Query: 294  DKGLE----FWYNVV---KPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPG 136
            ++G E     W  ++    PS N  +  +A+++  LCK G   E + +  ++   +    
Sbjct: 487  ERGRELMCKLWQKMMDENDPSVN--NAAFANLIDSLCKEGFFLEVFRIAEDMPQGKSVSE 544

Query: 135  IVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTI 10
              VY  +I   C+ G    A +IV +M++      + ++  I
Sbjct: 545  EFVYGQMIDSLCRCGRNHGASRIVYIMRKRGFFPSLVSYNYI 586



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
 Frame = -3

Query: 546 FSSIIHGLSNRGQT-DEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKA-FEVMDE 373
           +S  IH L  R +  DEAL +L  +R  G  P++   + IIH LC A +F +A   ++  
Sbjct: 295 WSRKIHNLCTRDRNVDEALRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSEAHHRLLLS 354

Query: 372 MRNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVV--KPSGNHDDYVYASVLRLLCKA 199
             +H + PD+ +   +   L  +R     L  +  ++  +P        Y  ++  LC  
Sbjct: 355 FASHCV-PDQRTCNVLIARLLDSRTPHATLHVFRGLIAARPEFVPSLINYNRLIHQLCSF 413

Query: 198 GKLREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATW 19
            +  EA  L  ++      P  V Y  +I G CK+G    A K+ D M E+ +  +  T+
Sbjct: 414 SQPNEAHGLFFDMRSRGHCPNAVSYTTLIDGYCKIGEETSAWKLFDEMLESGVVPNSLTY 473

Query: 18  QTI 10
             +
Sbjct: 474 SVL 476


>ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020-like
            [Vitis vinifera]
          Length = 680

 Score =  216 bits (551), Expect = 5e-54
 Identities = 106/244 (43%), Positives = 164/244 (67%), Gaps = 1/244 (0%)
 Frame = -3

Query: 729  LKNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVI 550
            + N +ELLN ++ MLQ  C PD+ TLN+V++G CK G++EEA  +L+DM+ GKFC PD +
Sbjct: 431  MNNPTELLNVLVFMLQTQCQPDVITLNTVINGFCKMGRVEEALKVLDDMVMGKFCAPDSV 490

Query: 549  TFSSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDE 373
            T+++II GL N G+T+EAL++L + M E G  P   T+N ++H L +  + + A EV + 
Sbjct: 491  TYTTIICGLLNLGRTEEALDVLRRVMPEKGFKPGVVTFNAVLHGLFKLQQANVATEVFNS 550

Query: 372  MRNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGK 193
            M + G++ + +++T + DGL ++ + D+   FW +V+ PS  HD++VYA++L+ LC++GK
Sbjct: 551  MVSDGVAANTITYTIIIDGLFESDQIDEAKRFWDDVIWPSKVHDNFVYAAILKGLCRSGK 610

Query: 192  LREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQT 13
            L EA D L EL+D      +V YN++I  ACKLGS R+A  IV  MK+N L  D  TW+ 
Sbjct: 611  LNEACDFLYELVDCGVTLNVVNYNILIDHACKLGSKREAYTIVQEMKKNGLTPDAVTWRI 670

Query: 12   IKLL 1
            +  L
Sbjct: 671  LHKL 674



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
 Frame = -3

Query: 648 SVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMRE 469
           +++   CK G   E   I  DM +GK    + + +  +I  L   G+   A  I++ MR+
Sbjct: 283 NLIDSLCKEGFFLEVFRIAEDMPQGKSVSEEFV-YGQMIDSLCRCGRNHGASRIVYIMRK 341

Query: 468 DGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRKFDK 289
            G  P+  +YN I+H L + G   +A++++ E    G    + ++  + + LC++    K
Sbjct: 342 RGFFPSLVSYNYIVHGLSKEGGCMRAYQLLKEGVEFGYMMSEHTYKVLLEALCRDADLCK 401

Query: 288 GLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVYNVVIH 109
             E    ++   G     +Y   LR LC      E  ++L  ++  +  P ++  N VI+
Sbjct: 402 AREVMQLMLNKEGVDQTRIYNIYLRALCLMNNPTELLNVLVFMLQTQCQPDVITLNTVIN 461

Query: 108 GACKLGSMRDALKIVDLMKENRLKA-DIATWQTI 10
           G CK+G + +ALK++D M   +  A D  T+ TI
Sbjct: 462 GFCKMGRVEEALKVLDDMVMGKFCAPDSVTYTTI 495



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 43/282 (15%)
 Frame = -3

Query: 726 KNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEA------------------- 604
           +N  E L  +  +   G  PD   L+S++H  C A +  EA                   
Sbjct: 75  RNVDEALRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSEAHHRLLLSFASHCVPDQRTC 134

Query: 603 NTILNDMLEGKF-----------------CPPDVITFSSIIHGLSNRGQTDEALEILHQM 475
           N ++  +L+ +                    P +I ++ +IH L +  Q +EA  +   M
Sbjct: 135 NVLIARLLDSRTPHATLHVFRGLIAARPEFVPSLINYNRLIHQLCSFSQPNEAHGLFFDM 194

Query: 474 REDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRKF 295
           R  G  PN  +Y  +I   C+ G+   A+++ DEM   G+ P+ ++++ +  G+   R  
Sbjct: 195 RSRGHCPNAVSYTTLIDGYCKIGEETSAWKLFDEMLESGVVPNSLTYSVLLKGVLCKRDV 254

Query: 294 DKGLE----FWYNVV---KPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPG 136
           ++G E     W  ++    PS N  +  +A+++  LCK G   E + +  ++   +    
Sbjct: 255 ERGRELMCKLWQKMMDENDPSVN--NAAFANLIDSLCKEGFFLEVFRIAEDMPQGKSVSE 312

Query: 135 IVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTI 10
             VY  +I   C+ G    A +IV +M++      + ++  I
Sbjct: 313 EFVYGQMIDSLCRCGRNHGASRIVYIMRKRGFFPSLVSYNYI 354



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
 Frame = -3

Query: 546 FSSIIHGLSNRGQT-DEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKA-FEVMDE 373
           +S  IH L  R +  DEAL +L  +R  G  P++   + IIH LC A +F +A   ++  
Sbjct: 63  WSRKIHNLCTRDRNVDEALRLLDLLRLRGYRPDSLNLSSIIHALCDANRFSEAHHRLLLS 122

Query: 372 MRNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVV--KPSGNHDDYVYASVLRLLCKA 199
             +H + PD+ +   +   L  +R     L  +  ++  +P        Y  ++  LC  
Sbjct: 123 FASHCV-PDQRTCNVLIARLLDSRTPHATLHVFRGLIAARPEFVPSLINYNRLIHQLCSF 181

Query: 198 GKLREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATW 19
            +  EA  L  ++      P  V Y  +I G CK+G    A K+ D M E+ +  +  T+
Sbjct: 182 SQPNEAHGLFFDMRSRGHCPNAVSYTTLIDGYCKIGEETSAWKLFDEMLESGVVPNSLTY 241

Query: 18  QTI 10
             +
Sbjct: 242 SVL 244


>ref|XP_004301253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020-like
            [Fragaria vesca subsp. vesca]
          Length = 682

 Score =  216 bits (549), Expect = 8e-54
 Identities = 103/239 (43%), Positives = 157/239 (65%), Gaps = 1/239 (0%)
 Frame = -3

Query: 723  NSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITF 544
            N++ELLNT++ MLQ  C PD+ TLN VV+G CK G++EEA  +L+DM+ GKFC P+V+TF
Sbjct: 419  NTTELLNTLVSMLQTECQPDVITLNIVVNGFCKMGRVEEALKVLDDMMTGKFCAPNVVTF 478

Query: 543  SSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMR 367
            ++II+GL N G+T EAL ILH  M + G  PN  TYN ++  L +  +  +A E+ + M 
Sbjct: 479  TTIINGLLNVGRTQEALYILHDVMPQKGFRPNVVTYNAVLRGLFKLDQGKQAMEIFNGMV 538

Query: 366  NHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLR 187
              G++    ++T + DGLC++ + ++   FW +V+ PS  HD++VYA++++ +C +G   
Sbjct: 539  TEGVAASSTTYTIIIDGLCESDQLEEAKRFWDDVIWPSQIHDNFVYAAIIKGICHSGNFD 598

Query: 186  EAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTI 10
            EA   L EL+D   +P I  YN+VI  ACKLG  ++A ++V  MK N L  D  TW+ +
Sbjct: 599  EACHFLYELVDSGVSPNIFSYNIVIDTACKLGLKKEAYEVVREMKRNGLSPDSVTWRIL 657



 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 54/217 (24%), Positives = 107/217 (49%), Gaps = 3/217 (1%)
 Frame = -3

Query: 651 NSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQTDEALEILHQMR 472
           ++++   C+ G  +E   I  D  +G+    +   +  +I  L   G+   A  I++ MR
Sbjct: 266 SNLIESMCREGYFQEVFGIAEDRPQGESVNEE-FAYGQMIDSLCKAGRYHGASRIVYIMR 324

Query: 471 EDGLLPNNFTYNPIIHELCRAGKFD--KAFEVMDEMRNHGLSPDKVSFTFVFDGLCKNRK 298
             G +P   +YN I+H L + G+    +A+++++E    G  P + ++  + +GLC+   
Sbjct: 325 HRGFVPRVTSYNCIVHGLTKEGEGGVMRAYQLLEEGIEFGYLPSEYTYKVLVEGLCQESD 384

Query: 297 FDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDERFAPGIVVYNV 118
            DK  +    +++        +Y   LR LC A    E  + L  ++     P ++  N+
Sbjct: 385 VDKAWQVLQYMLRKERVDKTRMYNIYLRALCLANNTTELLNTLVSMLQTECQPDVITLNI 444

Query: 117 VIHGACKLGSMRDALKIVDLMKENRLKA-DIATWQTI 10
           V++G CK+G + +ALK++D M   +  A ++ T+ TI
Sbjct: 445 VVNGFCKMGRVEEALKVLDDMMTGKFCAPNVVTFTTI 481



 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 48/210 (22%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
 Frame = -3

Query: 699 MIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLS 520
           ++  L+      +   N ++   C   +  EA+T+L DM+    C P+ ++++++I+G  
Sbjct: 140 LLSHLKPDFVASLVNYNRLMDQLCSLRRPSEAHTVLFDMMSRGHC-PNAVSYTTLINGYC 198

Query: 519 NRGQTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPD-- 346
             G+   A ++  +M E  + PN+ TY+ +I  + R      A E+M ++       D  
Sbjct: 199 GMGELSHAHKVFDEMCEREVAPNSMTYSVLISGVLRKRDIRGAVEMMGKLWEAMKGEDDT 258

Query: 345 ---KVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGN--HDDYVYASVLRLLCKAGKLREA 181
                +F+ + + +C+   F +   F     +P G   ++++ Y  ++  LCKAG+   A
Sbjct: 259 LVKNAAFSNLIESMCREGYFQE--VFGIAEDRPQGESVNEEFAYGQMIDSLCKAGRYHGA 316

Query: 180 WDLLNELIDERFAPGIVVYNVVIHGACKLG 91
             ++  +    F P +  YN ++HG  K G
Sbjct: 317 SRIVYIMRHRGFVPRVTSYNCIVHGLTKEG 346



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 50/240 (20%), Positives = 105/240 (43%), Gaps = 14/240 (5%)
 Frame = -3

Query: 687 LQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPD----VITFSSIIHGLS 520
           + + C PD  T N ++    +    +  +T LN +       PD    ++ ++ ++  L 
Sbjct: 107 IHSDCVPDQRTCNVII---ARLLDSQTPHTTLNVLRLLSHLKPDFVASLVNYNRLMDQLC 163

Query: 519 NRGQTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKV 340
           +  +  EA  +L  M   G  PN  +Y  +I+  C  G+   A +V DEM    ++P+ +
Sbjct: 164 SLRRPSEAHTVLFDMMSRGHCPNAVSYTTLINGYCGMGELSHAHKVFDEMCEREVAPNSM 223

Query: 339 SFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYV-----YASVLRLLCKAGKLREAWD 175
           +++ +  G+ + R     +E    + +     DD +     +++++  +C+ G  +E + 
Sbjct: 224 TYSVLISGVLRKRDIRGAVEMMGKLWEAMKGEDDTLVKNAAFSNLIESMCREGYFQEVFG 283

Query: 174 LL-----NELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQTI 10
           +       E ++E FA     Y  +I   CK G    A +IV +M+       + ++  I
Sbjct: 284 IAEDRPQGESVNEEFA-----YGQMIDSLCKAGRYHGASRIVYIMRHRGFVPRVTSYNCI 338


>ref|XP_003623405.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355498420|gb|AES79623.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 737

 Score =  213 bits (541), Expect = 7e-53
 Identities = 102/244 (41%), Positives = 160/244 (65%), Gaps = 1/244 (0%)
 Frame = -3

Query: 729  LKNSSELLNTMIKMLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVI 550
            + N +ELLN ++ ML++ C  D+ TLN+V++G CK G+ +EA  +LNDML GKFC PDV+
Sbjct: 373  VNNPTELLNVLVFMLESHCQTDVITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVV 432

Query: 549  TFSSIIHGLSNRGQTDEALEILHQ-MREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDE 373
            TF+++I GL +  + DEAL++ ++ M E+GL P   TYN +I  L +  + + AFEV + 
Sbjct: 433  TFTTLISGLLDAEKVDEALDLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNN 492

Query: 372  MRNHGLSPDKVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGK 193
            M   G++PD  ++T + +GLC+  + ++   FW +V+ PSG HD++VYA++L+ LC +GK
Sbjct: 493  MAGDGITPDSTTYTVIVEGLCECDQIEEAKSFWQSVIWPSGIHDNFVYAAILKGLCSSGK 552

Query: 192  LREAWDLLNELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENRLKADIATWQT 13
              EA   L EL+D   +P I  YN++I+ AC LG  R+  +IV  M +N +  D  TW+ 
Sbjct: 553  FNEACHFLYELVDSGISPNIYSYNILINCACNLGLKREVYQIVREMNKNGVAPDCVTWRI 612

Query: 12   IKLL 1
            +  L
Sbjct: 613  LHKL 616



 Score = 83.2 bits (204), Expect = 8e-14
 Identities = 53/227 (23%), Positives = 106/227 (46%), Gaps = 1/227 (0%)
 Frame = -3

Query: 687 LQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRGQ 508
           +++  + ++    +++   CK G   E   I   M  G   P  V+ +  +I      G+
Sbjct: 212 MEDELSVNVAAFANLIDSLCKEGFFNEVFEIAELMPCGSSLPEQVV-YGQMIDSFCKVGR 270

Query: 507 TDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFTF 328
              A  I++ MR+   +P++ +YN IIH L + G   + +++++E    G S  + ++  
Sbjct: 271 YHGAARIVYLMRKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLEEGAEFGFSLCEHTYKV 330

Query: 327 VFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLREAWDLLNELIDER 148
           + + LC+    DK  E    ++   G     +Y   LR LC      E  ++L  +++  
Sbjct: 331 LVEALCRVLDVDKAREVLKLMLYKEGVDKTRIYNIYLRALCHVNNPTELLNVLVFMLESH 390

Query: 147 FAPGIVVYNVVIHGACKLGSMRDALKIV-DLMKENRLKADIATWQTI 10
               ++  N VI+G CK+G   +ALK++ D++       D+ T+ T+
Sbjct: 391 CQTDVITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTL 437



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 51/221 (23%), Positives = 101/221 (45%), Gaps = 6/221 (2%)
 Frame = -3

Query: 687 LQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKF-CPPDVITFSSIIHGLSNRG 511
           L +G  PD  T N ++    ++    +  +++  +++ K    P ++ ++ ++       
Sbjct: 65  LSSGSIPDHRTCNLLLAKLLRSKTPFQTWSLVKSLIQIKAGFVPSLVNYNRLMDHFCFIH 124

Query: 510 QTDEALEILHQMREDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPDKVSFT 331
           +  +A  +   M+  G  PN  +Y  +I+  C  G    A +V DEM   GL P+ ++++
Sbjct: 125 RPFDAHRLFFDMKNRGHCPNVVSYTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYS 184

Query: 330 FVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDY-----VYASVLRLLCKAGKLREAWDLLN 166
            +  G  + R F+ G E    + +     D+       +A+++  LCK G   E +++  
Sbjct: 185 VLIRGFLRGRDFESGRELMCKLWERMKMEDELSVNVAAFANLIDSLCKEGFFNEVFEIAE 244

Query: 165 ELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLMKENR 43
            +      P  VVY  +I   CK+G    A +IV LM++ R
Sbjct: 245 LMPCGSSLPEQVVYGQMIDSFCKVGRYHGAARIVYLMRKRR 285



 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
 Frame = -3

Query: 690 MLQNGCTPDIYTLNSVVHGCCKAGQMEEANTILNDMLEGKFCPPDVITFSSIIHGLSNRG 511
           M   G  P++ +  ++++G C  G + +A  + ++MLE     P+ +T+S +I G     
Sbjct: 136 MKNRGHCPNVVSYTTLINGYCSVGGIRDAMKVFDEMLESGL-EPNSMTYSVLIRGFLRGR 194

Query: 510 QTDEALEILHQM-----REDGLLPNNFTYNPIIHELCRAGKFDKAFEVMDEMRNHGLSPD 346
             +   E++ ++      ED L  N   +  +I  LC+ G F++ FE+ + M      P+
Sbjct: 195 DFESGRELMCKLWERMKMEDELSVNVAAFANLIDSLCKEGFFNEVFEIAELMPCGSSLPE 254

Query: 345 KVSFTFVFDGLCKNRKFDKGLEFWYNVVKPSGNHDDYVYASVLRLLCKAGKLREAWDLLN 166
           +V +  + D  CK  ++       Y + K      D  Y  ++  L K G     + LL 
Sbjct: 255 QVVYGQMIDSFCKVGRYHGAARIVYLMRKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLE 314

Query: 165 ELIDERFAPGIVVYNVVIHGACKLGSMRDALKIVDLM 55
           E  +  F+     Y V++   C++  +  A +++ LM
Sbjct: 315 EGAEFGFSLCEHTYKVLVEALCRVLDVDKAREVLKLM 351


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