BLASTX nr result

ID: Ephedra25_contig00005708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00005708
         (549 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD35494.1| putative auxin induced cell wall protein [Pinus ...    83   4e-14
ref|XP_002978644.1| hypothetical protein SELMODRAFT_177096 [Sela...    76   5e-12
ref|XP_002984582.1| hypothetical protein SELMODRAFT_120704 [Sela...    59   1e-06

>emb|CAD35494.1| putative auxin induced cell wall protein [Pinus pinaster]
          Length = 355

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
 Frame = +3

Query: 273 FVSLVC--------GHDLPQELQPPIGNSLKITTKTSNGHYVYKCEKNKWIPMYASAELS 428
           FV+LVC         + +   L+PP GNSLK+ ++T  G YVY+C+   W+P+ ASA L 
Sbjct: 9   FVALVCLVLLNINTCNGVTPSLEPPQGNSLKLKSRTYEGKYVYQCKNGTWVPVSASAMLV 68

Query: 429 KPTDSKSILGNYTF-HPYADPAYAGKWALKNRLSDYAESGS 548
             +DSK  LGNY+F +  A+P   G W L+N  +D AESGS
Sbjct: 69  NISDSKISLGNYSFEYSAAEPKLVGTWYLRNDDADAAESGS 109


>ref|XP_002978644.1| hypothetical protein SELMODRAFT_177096 [Selaginella moellendorffii]
           gi|300153453|gb|EFJ20091.1| hypothetical protein
           SELMODRAFT_177096 [Selaginella moellendorffii]
          Length = 348

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 7/107 (6%)
 Frame = +3

Query: 249 TVLALGFLFVSLVC-----GHDLPQELQPPIGNSLKITTKTSNGHYVYKCEKNKWIPMYA 413
           +++ LG L  +LV      GH   + L+PP GNS  +  KTSNGH+ YKC   KW    A
Sbjct: 5   SLMLLGLLQAALVLSLIQHGHGWDEYLKPPAGNSPHMRVKTSNGHHSYKCSCEKWELTAA 64

Query: 414 SAELSKPTDSKSILGNYTF--HPYADPAYAGKWALKNRLSDYAESGS 548
           SA+L    DSK+I+G Y+F  +  ++  + G W L N  +D  ESG+
Sbjct: 65  SADLLSTVDSKTIIGAYSFSRNSNSNSKHQGTWTLFNNPADAIESGA 111


>ref|XP_002984582.1| hypothetical protein SELMODRAFT_120704 [Selaginella moellendorffii]
           gi|300147564|gb|EFJ14227.1| hypothetical protein
           SELMODRAFT_120704 [Selaginella moellendorffii]
          Length = 312

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
 Frame = +3

Query: 351 KTSNGHYVYKCEKNKWIPMYASAELSKPTDSKSILGNYTF--HPYADPAYAGKWALKNRL 524
           KTSNGH+ YKC   KW    ASA+L    DSK+I+G Y+F  +  ++  + G W L N  
Sbjct: 4   KTSNGHHSYKCSCEKWELTAASADLLSTVDSKTIIGAYSFSRNSNSNSKHQGTWTLFNNP 63

Query: 525 SDYAESGS 548
           +D  ESG+
Sbjct: 64  ADAIESGA 71


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