BLASTX nr result
ID: Ephedra25_contig00005608
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00005608
(734 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR17906.1| unknown [Picea sitchensis] 78 3e-12
gb|EMT31808.1| 60S ribosomal protein L24 [Aegilops tauschii] 75 3e-11
gb|EMS67681.1| Zinc finger protein VAR3, chloroplastic [Triticum... 75 3e-11
sp|P50888.1|RL24_HORVU RecName: Full=60S ribosomal protein L24 g... 75 3e-11
gb|EMT26743.1| 60S ribosomal protein L24 [Aegilops tauschii] 74 4e-11
gb|EMS54414.1| 60S ribosomal protein L24 [Triticum urartu] 74 5e-11
ref|XP_004955822.1| PREDICTED: 60S ribosomal protein L24-like [S... 74 6e-11
ref|XP_003574678.1| PREDICTED: 60S ribosomal protein L24-like [B... 74 6e-11
ref|XP_003564475.1| PREDICTED: 60S ribosomal protein L24-like [B... 74 6e-11
ref|XP_003563859.1| PREDICTED: 60S ribosomal protein L24-like [B... 74 6e-11
ref|XP_001763745.1| predicted protein [Physcomitrella patens] gi... 74 6e-11
ref|XP_006657567.1| PREDICTED: 60S ribosomal protein L24-like is... 73 8e-11
ref|XP_006644899.1| PREDICTED: 60S ribosomal protein L24-like [O... 73 8e-11
ref|XP_004970361.1| PREDICTED: 60S ribosomal protein L24-like [S... 73 8e-11
ref|XP_004961704.1| PREDICTED: 60S ribosomal protein L24-like [S... 73 8e-11
dbj|BAC06922.1| putative 60S ribosomal protein L24 [Oryza sativa... 73 8e-11
ref|NP_001059209.2| Os07g0224000 [Oryza sativa Japonica Group] g... 73 8e-11
ref|XP_002441285.1| hypothetical protein SORBIDRAFT_09g023800 [S... 73 8e-11
gb|EEC81749.1| hypothetical protein OsI_25404 [Oryza sativa Indi... 73 8e-11
gb|EEC71698.1| hypothetical protein OsI_04199 [Oryza sativa Indi... 73 8e-11
>gb|ABR17906.1| unknown [Picea sitchensis]
Length = 164
Score = 77.8 bits (190), Expect = 3e-12
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAAR 648
+D HAE KKRRRT +KPYSRSIVGASLEVIQKKR+EKTEVRAAAR
Sbjct: 63 KDIHAEQVKKRRRTTNKPYSRSIVGASLEVIQKKRTEKTEVRAAAR 108
>gb|EMT31808.1| 60S ribosomal protein L24 [Aegilops tauschii]
Length = 162
Score = 74.7 bits (182), Expect = 3e-11
Identities = 46/81 (56%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAARXXXXXXXXXXXXXX 690
+D HAE AKKRRRT KPYSRSIVGA+LEVIQKKR+EK EVR AAR
Sbjct: 63 KDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKT 122
Query: 691 XSE------TVSKTQK-QGGK 732
E V+K+QK QGGK
Sbjct: 123 KDEKKAKKAEVTKSQKSQGGK 143
>gb|EMS67681.1| Zinc finger protein VAR3, chloroplastic [Triticum urartu]
Length = 1307
Score = 74.7 bits (182), Expect = 3e-11
Identities = 46/81 (56%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAARXXXXXXXXXXXXXX 690
+D HAE AKKRRRT KPYSRSIVGA+LEVIQKKR+EK EVR AAR
Sbjct: 1133 KDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKT 1192
Query: 691 XSE------TVSKTQK-QGGK 732
E V+K+QK QGGK
Sbjct: 1193 KDEKKAKKAEVTKSQKSQGGK 1213
>sp|P50888.1|RL24_HORVU RecName: Full=60S ribosomal protein L24 gi|1154859|emb|CAA63960.1|
L24 ribosomal protein [Hordeum vulgare subsp. vulgare]
gi|326506376|dbj|BAJ86506.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 162
Score = 74.7 bits (182), Expect = 3e-11
Identities = 46/81 (56%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAARXXXXXXXXXXXXXX 690
+D HAE AKKRRRT KPYSRSIVGA+LEVIQKKR+EK EVR AAR
Sbjct: 63 KDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKT 122
Query: 691 XSE------TVSKTQK-QGGK 732
E V+K+QK QGGK
Sbjct: 123 KDEKKAKKAEVTKSQKSQGGK 143
>gb|EMT26743.1| 60S ribosomal protein L24 [Aegilops tauschii]
Length = 212
Score = 74.3 bits (181), Expect = 4e-11
Identities = 43/79 (54%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAARXXXXXXXXXXXXXX 690
+D HAE AKKRRRT +PYSRSIVGASLEVIQKKR+EK EVR AAR
Sbjct: 115 KDIHAEAAKKRRRTTKRPYSRSIVGASLEVIQKKRAEKPEVRDAAREAALREIKERIKKT 174
Query: 691 XSE-----TVSKTQKQGGK 732
E V+K+QK G+
Sbjct: 175 KDEKKAKVEVTKSQKSAGR 193
>gb|EMS54414.1| 60S ribosomal protein L24 [Triticum urartu]
Length = 115
Score = 73.9 bits (180), Expect = 5e-11
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAAR 648
+D HAE AKKRRRT +PYSRSIVGASLEVIQKKR+EK EVR AAR
Sbjct: 17 QDIHAEAAKKRRRTTKRPYSRSIVGASLEVIQKKRAEKPEVRDAAR 62
>ref|XP_004955822.1| PREDICTED: 60S ribosomal protein L24-like [Setaria italica]
Length = 161
Score = 73.6 bits (179), Expect = 6e-11
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAAR 648
+D HAE AKKRRRT KPYSRSIVGA+LEVIQKKR+EK EVR AAR
Sbjct: 63 KDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAR 108
>ref|XP_003574678.1| PREDICTED: 60S ribosomal protein L24-like [Brachypodium distachyon]
Length = 161
Score = 73.6 bits (179), Expect = 6e-11
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAAR 648
+D HAE AKKRRRT KPYSRSIVGA+LEVIQKKR+EK EVR AAR
Sbjct: 63 KDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAR 108
>ref|XP_003564475.1| PREDICTED: 60S ribosomal protein L24-like [Brachypodium distachyon]
Length = 161
Score = 73.6 bits (179), Expect = 6e-11
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAAR 648
+D HAE AKKRRRT KPYSRSIVGA+LEVIQKKR+EK EVR AAR
Sbjct: 63 KDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAR 108
>ref|XP_003563859.1| PREDICTED: 60S ribosomal protein L24-like [Brachypodium distachyon]
Length = 161
Score = 73.6 bits (179), Expect = 6e-11
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAAR 648
+D HAE AKKRRRT KPYSRSIVGASL+VIQKKR+EK EVR AAR
Sbjct: 63 KDIHAEAAKKRRRTTKKPYSRSIVGASLDVIQKKRAEKPEVRDAAR 108
>ref|XP_001763745.1| predicted protein [Physcomitrella patens]
gi|162684989|gb|EDQ71387.1| predicted protein
[Physcomitrella patens]
Length = 161
Score = 73.6 bits (179), Expect = 6e-11
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAAR 648
+D H KKRRRT +KPYSRSIVGASLEVIQKKR+EKTEVRAAAR
Sbjct: 63 KDLHDTTVKKRRRTTNKPYSRSIVGASLEVIQKKRTEKTEVRAAAR 108
>ref|XP_006657567.1| PREDICTED: 60S ribosomal protein L24-like isoform X1 [Oryza
brachyantha] gi|573950553|ref|XP_006657568.1| PREDICTED:
60S ribosomal protein L24-like isoform X2 [Oryza
brachyantha]
Length = 161
Score = 73.2 bits (178), Expect = 8e-11
Identities = 43/80 (53%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAARXXXXXXXXXXXXXX 690
+D HAE KKRRRT KPYSRSIVGA+LEVIQKKR+EK EVR AAR
Sbjct: 63 KDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKT 122
Query: 691 XSE------TVSKTQKQGGK 732
E V+K+QK GK
Sbjct: 123 KDEKKAKKAEVAKSQKTSGK 142
>ref|XP_006644899.1| PREDICTED: 60S ribosomal protein L24-like [Oryza brachyantha]
Length = 162
Score = 73.2 bits (178), Expect = 8e-11
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAAR 648
+D HAE KKRRRT KPYSRSIVGA+LEVIQKKRSEK EVR AAR
Sbjct: 63 KDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRSEKPEVRDAAR 108
>ref|XP_004970361.1| PREDICTED: 60S ribosomal protein L24-like [Setaria italica]
Length = 162
Score = 73.2 bits (178), Expect = 8e-11
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAAR 648
+D HAE KKRRRT KPYSRSIVGA+LEVIQKKRSEK EVR AAR
Sbjct: 63 KDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRSEKPEVRDAAR 108
>ref|XP_004961704.1| PREDICTED: 60S ribosomal protein L24-like [Setaria italica]
Length = 161
Score = 73.2 bits (178), Expect = 8e-11
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAAR 648
+D HAE KKRRRT KPYSRSIVGASLEVIQKKR+EK EVR AAR
Sbjct: 63 KDIHAEAVKKRRRTTKKPYSRSIVGASLEVIQKKRAEKPEVRDAAR 108
>dbj|BAC06922.1| putative 60S ribosomal protein L24 [Oryza sativa Japonica Group]
gi|50510087|dbj|BAD30738.1| putative 60S ribosomal
protein L24 [Oryza sativa Japonica Group]
Length = 160
Score = 73.2 bits (178), Expect = 8e-11
Identities = 43/80 (53%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAARXXXXXXXXXXXXXX 690
+D HAE KKRRRT KPYSRSIVGA+LEVIQKKR+EK EVR AAR
Sbjct: 62 KDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAARESALREIKERIKKT 121
Query: 691 XSE------TVSKTQKQGGK 732
E V+K+QK GK
Sbjct: 122 KDEKKAKKAEVAKSQKASGK 141
>ref|NP_001059209.2| Os07g0224000 [Oryza sativa Japonica Group]
gi|255677612|dbj|BAF21123.2| Os07g0224000 [Oryza sativa
Japonica Group]
Length = 161
Score = 73.2 bits (178), Expect = 8e-11
Identities = 43/80 (53%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAARXXXXXXXXXXXXXX 690
+D HAE KKRRRT KPYSRSIVGA+LEVIQKKR+EK EVR AAR
Sbjct: 63 KDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAARESALREIKERIKKT 122
Query: 691 XSE------TVSKTQKQGGK 732
E V+K+QK GK
Sbjct: 123 KDEKKAKKAEVAKSQKASGK 142
>ref|XP_002441285.1| hypothetical protein SORBIDRAFT_09g023800 [Sorghum bicolor]
gi|241946570|gb|EES19715.1| hypothetical protein
SORBIDRAFT_09g023800 [Sorghum bicolor]
Length = 161
Score = 73.2 bits (178), Expect = 8e-11
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAAR 648
+D HAE KKRRRT KPYSRSIVGASLEVIQKKR+EK EVR AAR
Sbjct: 63 KDIHAEAVKKRRRTTKKPYSRSIVGASLEVIQKKRAEKPEVRDAAR 108
>gb|EEC81749.1| hypothetical protein OsI_25404 [Oryza sativa Indica Group]
Length = 227
Score = 73.2 bits (178), Expect = 8e-11
Identities = 43/80 (53%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAARXXXXXXXXXXXXXX 690
+D HAE KKRRRT KPYSRSIVGA+LEVIQKKR+EK EVR AAR
Sbjct: 129 KDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKT 188
Query: 691 XSE------TVSKTQKQGGK 732
E V+K+QK GK
Sbjct: 189 KDEKKAKKAEVAKSQKASGK 208
>gb|EEC71698.1| hypothetical protein OsI_04199 [Oryza sativa Indica Group]
Length = 1058
Score = 73.2 bits (178), Expect = 8e-11
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +1
Query: 511 EDTHAELAKKRRRTVSKPYSRSIVGASLEVIQKKRSEKTEVRAAAR 648
+D HAE KKRRRT KPYSRSIVGA+LEVIQKKRSEK EVR AAR
Sbjct: 959 KDIHAEAVKKRRRTTKKPYSRSIVGATLEVIQKKRSEKPEVRDAAR 1004