BLASTX nr result

ID: Ephedra25_contig00005557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00005557
         (913 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006841446.1| hypothetical protein AMTR_s00003p00075520 [A...    63   1e-07

>ref|XP_006841446.1| hypothetical protein AMTR_s00003p00075520 [Amborella trichopoda]
           gi|548843467|gb|ERN03121.1| hypothetical protein
           AMTR_s00003p00075520 [Amborella trichopoda]
          Length = 857

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
 Frame = -1

Query: 358 VHHHHPARRVV-SSALRTTSGPAHLS--------TISSNYYCPAAPRPPPQLGSDFCGKR 206
           VHHH P ++   +SA + TS  A  S        + SS+   P   +P P+LGSDF G+R
Sbjct: 20  VHHHQPPQKFTFNSATKPTSKNASASHSLSPNFPSFSSSLSHPQTQKPKPELGSDFNGRR 79

Query: 205 PKRGISKNNLGRGNSMKCNQSLTAQAVLSDVLNAPLEQPVDNFLEGKRLVL---DDYVSL 35
             R +SK +  R        S  A+  L  +  A  +  V+  L      +   +D++ L
Sbjct: 80  STRFVSKMHFNRPKHGPKRHSSVAETALGHLTCADSDATVEAILTNLVFSVSSSEDFLFL 139

Query: 34  MKELGSRGECS 2
           ++ELG+RGECS
Sbjct: 140 LRELGNRGECS 150


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