BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00004878
         (997 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321639.2| pentatricopeptide repeat-containing family p...   232   2e-58
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr...   229   1e-57
ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A...   229   1e-57
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   229   2e-57
gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]     228   3e-57
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi...   227   5e-57
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe...   224   5e-56
ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Caps...   221   3e-55
gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]       221   4e-55
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   221   4e-55
ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containi...   218   4e-54
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ...   217   6e-54
ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutr...   216   1e-53
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi...   215   2e-53
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   214   3e-53
ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containi...   213   7e-53
ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar...   213   1e-52
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi...   209   1e-51
ref|XP_004971408.1| PREDICTED: pentatricopeptide repeat-containi...   206   9e-51
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   204   6e-50

>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550322390|gb|EEF05766.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 486

 Score =  232 bits (591), Expect = 2e-58
 Identities = 126/331 (38%), Positives = 192/331 (58%), Gaps = 8/331 (2%)
 Frame = -3

Query: 983  DKEWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXSVYNA 813
            ++EW  E ++KL G+  V  D+FV   LK L  YP  AL FF+W             YNA
Sbjct: 68   EREWNKEVEKKLVGMRIVLTDNFVIRVLKELRSYPVKALRFFQWVDRREGYQHNTVTYNA 127

Query: 812  MLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENP 633
            ++R LG++     FW V +EMK  G+ MD DT++ +  ++ K ++ ED+VRL+ +M + P
Sbjct: 128  LVRVLGRDDSIGEFWSVVDEMKNAGYEMDIDTYIKISRQFQKIKLMEDAVRLYEFMMDGP 187

Query: 632  QWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFD 453
             +KP    CY +L +++     ++D    V+D +K+ G  + K VYDG HR  T+AG+FD
Sbjct: 188  -FKPSVQDCYILLRSVAASDNPDLDLVSRVVDGYKATGNSLSKSVYDGMHRSFTSAGKFD 246

Query: 452  EAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILI 273
            EAEK+++ M   G+ PDNITYSQL++GLC++KR +EA +VL EM+  GC PDIKTWTILI
Sbjct: 247  EAEKIVKAMRDAGYEPDNITYSQLVFGLCKSKRLEEACKVLDEMEAGGCIPDIKTWTILI 306

Query: 272  EGHTNTGETDRALALLSEMVASGCAAD----EYTIRGLLFHLCDKNREMD-AYNLLLSSI 108
            +GH    + D+ L  L +M       D    +  ++G L       R+MD AY  L+  +
Sbjct: 307  QGHFAANQVDKGLLCLVKMTEKNTDPDADLLDVLVKGFL-----SQRKMDGAYTFLVEMV 361

Query: 107  EEQNMKPSAYTFREMIMRLAKAGMYTEANKI 15
             +  + P   T++ +I +L +     EA  +
Sbjct: 362  NKLRLVPWQATYKLLIEKLLQVRKLEEATDL 392


>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
            gi|557542189|gb|ESR53167.1| hypothetical protein
            CICLE_v10019266mg [Citrus clementina]
          Length = 639

 Score =  229 bits (584), Expect = 1e-57
 Identities = 127/321 (39%), Positives = 185/321 (57%), Gaps = 3/321 (0%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXSVYNAML 807
            +W ++  +KL+ +     D+FV + LK L  YP  AL FF W             YN +L
Sbjct: 214  DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273

Query: 806  RALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQW 627
            R L + +   +FW V EEMK  G+ MD DT++ +  ++ K ++ ED+V+LF +M + P +
Sbjct: 274  RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRIMEDAVKLFEFMMDGP-Y 332

Query: 626  KPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEA 447
            KP    C  +L ++S     ++     V + ++S G  + K VYDG HR LT  GRFDEA
Sbjct: 333  KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392

Query: 446  EKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEG 267
            EK+M+ M   GF PDNITYSQ+I+GLC+A R ++A  VL EM++ GC PDIKTWTILI+G
Sbjct: 393  EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452

Query: 266  HTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKP 87
            H    E DRAL   ++M+     AD   +  L+     + R   AY LL+  IE+ +++P
Sbjct: 453  HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVHLRP 512

Query: 86   SAYTFREMIMRLAKAGMYTEA 24
               TF+ +I +L  A    EA
Sbjct: 513  WQATFKTLIEKLLGARRLEEA 533


>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
            gi|548855973|gb|ERN13836.1| hypothetical protein
            AMTR_s00049p00223850 [Amborella trichopoda]
          Length = 570

 Score =  229 bits (584), Expect = 1e-57
 Identities = 126/328 (38%), Positives = 184/328 (56%), Gaps = 3/328 (0%)
 Frame = -3

Query: 989  LKDKEWCNETKEKLDGIS-DVSEDDFVSALKTLY--PGNALNFFEWXXXXXXXXXXXSVY 819
            L D EW  E K KL  +   +S+   +  L+ +   P  AL+F+ W             Y
Sbjct: 151  LVDSEWNEEVKCKLSSLGLPLSDSTILRVLEEIRVDPLKALDFYRWVGGQPNFRHSAITY 210

Query: 818  NAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAE 639
            N+++R LG+    + FW + +EMK  GF MD D++V +  R+ K  M +++V L+ +M+E
Sbjct: 211  NSIIRVLGRNDSVKEFWAMVKEMKESGFDMDMDSYVKLSRRFQKWNMLKEAVELYEFMSE 270

Query: 638  NPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGR 459
             P ++P    C  +L  L+       D    V+  F+  G  + K +YDG HR LT+ GR
Sbjct: 271  GP-YQPSVQHCGLLLRKLATSGNPGPDLVFRVVKKFEGAGNSLTKSIYDGIHRSLTSMGR 329

Query: 458  FDEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTI 279
            FDEA+ ++E M K GF PDNITYSQLI+GLC+A R DEA + L EM+  GC PD+KTWTI
Sbjct: 330  FDEAQNILEAMEKAGFIPDNITYSQLIFGLCKAHRFDEACKFLDEMEALGCTPDLKTWTI 389

Query: 278  LIEGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQ 99
            LI+GH   GE   AL+   +M+  G  AD   +  L+   C++NR  DAY LL   + + 
Sbjct: 390  LIQGHCLAGEVKEALSCFKKMLGKGVEADADLLEVLVAGFCNQNRPEDAYTLLSVMMTKT 449

Query: 98   NMKPSAYTFREMIMRLAKAGMYTEANKI 15
            ++KP   T++ +I  L    M  EA K+
Sbjct: 450  HLKPWQATYKILIEGLLGRRMLEEALKL 477



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 80/362 (22%), Positives = 149/362 (41%), Gaps = 35/362 (9%)
 Frame = -3

Query: 989  LKDKEWCNETKEKLDGIS-DVSEDDFVSALKTLY--PGNALNFFEWXXXXXXXXXXXSVY 819
            +  K WC E + +L+ ++  ++++  +  LK L   P N+L FF+W             Y
Sbjct: 14   VSQKGWCEEIENQLNKLNLKLTDEGVLFVLKELEKSPRNSLGFFKWVCDKMALKPSSVAY 73

Query: 818  NAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSV---RLFTW 648
            N MLR LG +   ++FW V  +M+  G  +D++T+  ++ R+ K +M  ++     LF+ 
Sbjct: 74   NLMLRILGVKDSMKDFWWVMNKMREVGHEIDKETYPTLLGRFVKEKMVIEASSLRELFSL 133

Query: 647  MAENPQWKPVAGICYRIL----------CALSH-------------QQCLNVDAAKTVID 537
                     +     ++L          C LS               + + VD  K  +D
Sbjct: 134  RQRETHTNSLLNEAIKLLVDSEWNEEVKCKLSSLGLPLSDSTILRVLEEIRVDPLK-ALD 192

Query: 536  VFKSRGGD----MEKVVYDGYHRCLTAAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGL 369
             ++  GG        + Y+   R L       E   +++EM + GF  D  +Y +L    
Sbjct: 193  FYRWVGGQPNFRHSAITYNSIIRVLGRNDSVKEFWAMVKEMKESGFDMDMDSYVKLSRRF 252

Query: 368  CRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEGHTNTGE--TDRALALLSEMVASGCAA 195
             +     EA E+   M +    P ++   +L+     +G    D    ++ +   +G + 
Sbjct: 253  QKWNMLKEAVELYEFMSEGPYQPSVQHCGLLLRKLATSGNPGPDLVFRVVKKFEGAGNSL 312

Query: 194  DEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKPSAYTFREMIMRLAKAGMYTEANKI 15
             +    G+   L    R  +A N +L ++E+    P   T+ ++I  L KA  + EA K 
Sbjct: 313  TKSIYDGIHRSLTSMGRFDEAQN-ILEAMEKAGFIPDNITYSQLIFGLCKAHRFDEACKF 371

Query: 14   SD 9
             D
Sbjct: 372  LD 373


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  229 bits (583), Expect = 2e-57
 Identities = 122/327 (37%), Positives = 187/327 (57%), Gaps = 3/327 (0%)
 Frame = -3

Query: 995  SFLKDKEWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXS 825
            S +   EW NE +++L+G+  +  D+FV   LK L  YP  AL FF W            
Sbjct: 205  SVVSATEWSNEVEKELEGMGILLTDNFVIRVLKELRNYPLKALQFFNWAGKCERYECNTI 264

Query: 824  VYNAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWM 645
             YNA+ R LG++     FW V EEMK  G  MD DT++ +  ++ K ++  D+V+L+ +M
Sbjct: 265  TYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQFQKNKLMGDAVKLYEFM 324

Query: 644  AENPQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAA 465
             + P +KP    C  +L ++S     +++    V++ +++ G  + K VYDG HR LT+ 
Sbjct: 325  MDGP-FKPSVQDCSMLLRSISASNYPDLNLVFRVVNKYEATGNSLSKAVYDGIHRSLTSI 383

Query: 464  GRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTW 285
            G FDEA K+M+ M   G+ PDNITYSQL++GLC+A+R +EA EVL EM+  GC PDIKTW
Sbjct: 384  GNFDEAAKMMKCMQTAGYEPDNITYSQLVFGLCKARRLEEACEVLDEMEAHGCLPDIKTW 443

Query: 284  TILIEGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIE 105
            TILI+GH    E  +AL  L++M+   C  D   +  L+     + R   AY L +  ++
Sbjct: 444  TILIQGHCVANEVGKALMCLAKMMEKHCDPDADLLAVLINAFLSQKRIDGAYTLFMDMVD 503

Query: 104  EQNMKPSAYTFREMIMRLAKAGMYTEA 24
            +  ++P   T++ +I +L +     EA
Sbjct: 504  KARLRPWQATYKLLIEKLLEVRKLEEA 530



 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 72/361 (19%), Positives = 141/361 (39%), Gaps = 34/361 (9%)
 Frame = -3

Query: 989  LKDKEWCNETKEKLDGISDV-SEDDFVSALKTLY--PGNALNFFEWXXXXXXXXXXXSVY 819
            L   +W  E + +L+  S + + +  +  LK L   P  A +FF W            +Y
Sbjct: 70   LSVNDWSPELETQLENSSPLLTHETVIYVLKKLDKDPHKAWDFFNWVCDRNGFKPSSPLY 129

Query: 818  NAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAE 639
            + MLR L K+   +NFW    +MK  GF  DE+T++ ++  + K +M  D+V    +   
Sbjct: 130  SLMLRILVKKDSMKNFWITLRKMKEQGFYTDEETYLTILGVFRKERMDSDAVAFKHFFDR 189

Query: 638  NPQWKPVAGICYRILCALSHQQCLN-----------VDAAKTVIDVFK------------ 528
              +   +  +   ++  +S  +  N           +     VI V K            
Sbjct: 190  MVEENAMDSVVKNVVSVVSATEWSNEVEKELEGMGILLTDNFVIRVLKELRNYPLKALQF 249

Query: 527  -SRGGDMEK-----VVYDGYHRCLTAAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLC 366
             +  G  E+     + Y+   R L       E   V+EEM   G   D  TY ++     
Sbjct: 250  FNWAGKCERYECNTITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQFQ 309

Query: 365  RAKRSDEAREVLHEMKKRGCNPDIKTWTILIE--GHTNTGETDRALALLSEMVASGCAAD 192
            + K   +A ++   M      P ++  ++L+     +N  + +    ++++  A+G +  
Sbjct: 310  KNKLMGDAVKLYEFMMDGPFKPSVQDCSMLLRSISASNYPDLNLVFRVVNKYEATGNSLS 369

Query: 191  EYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKPSAYTFREMIMRLAKAGMYTEANKIS 12
            +    G+   L       D    ++  ++    +P   T+ +++  L KA    EA ++ 
Sbjct: 370  KAVYDGIHRSLTSIG-NFDEAAKMMKCMQTAGYEPDNITYSQLVFGLCKARRLEEACEVL 428

Query: 11   D 9
            D
Sbjct: 429  D 429


>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
          Length = 628

 Score =  228 bits (581), Expect = 3e-57
 Identities = 121/321 (37%), Positives = 185/321 (57%), Gaps = 3/321 (0%)
 Frame = -3

Query: 977  EWCNETKEKLDGIS-DVSEDDFVSALKTL--YPGNALNFFEWXXXXXXXXXXXSVYNAML 807
            +W +E +++L  I  D+S++  +  LK L  YP  A +FF W             YNA  
Sbjct: 212  QWSDEVEKQLGKIIVDLSDNIVLRVLKGLRTYPSKASSFFRWVGRYPGYEHNSVTYNAAA 271

Query: 806  RALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQW 627
            R L ++     FW + EEMKG G+ +D D ++ +  ++ K +M EDSV+L+ +M + P +
Sbjct: 272  RVLSRDDSIGEFWGMIEEMKGAGYDLDIDNYIKISRQFQKSKMMEDSVKLYEFMMDGP-F 330

Query: 626  KPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEA 447
            KP A  C  +L ++S     +   A  V   ++S G  + K  YDG HR LT+AGRFDEA
Sbjct: 331  KPSAQDCNLLLRSISAGDNPDCSLAFRVAKKYESTGRTLSKAAYDGIHRSLTSAGRFDEA 390

Query: 446  EKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEG 267
            EK+M+ M   G+ PDNITYSQL++GLC+A+R +EAR VL EM+  GC PDIKTWTILI+G
Sbjct: 391  EKMMKVMRNAGYEPDNITYSQLVFGLCKARRLEEARRVLDEMEANGCTPDIKTWTILIQG 450

Query: 266  HTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKP 87
            H + GE D+ L    +M+   C  D   +  L+     + +   AY+LL+  +++  + P
Sbjct: 451  HCSAGEVDKGLMCFMKMMEEDCNVDGDLLDVLIKGFLSQRKIKGAYDLLIELVDKARVIP 510

Query: 86   SAYTFREMIMRLAKAGMYTEA 24
               T++ +I ++ +     EA
Sbjct: 511  WQATYKNLIEKMLEVRKLEEA 531


>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Citrus sinensis]
          Length = 639

 Score =  227 bits (579), Expect = 5e-57
 Identities = 126/321 (39%), Positives = 183/321 (57%), Gaps = 3/321 (0%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXSVYNAML 807
            +W ++  +KL+ +     D+FV + LK L  YP  AL FF W             YN +L
Sbjct: 214  DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273

Query: 806  RALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQW 627
            R L + +   +FW V EEMK  G+ MD DT++ +  ++ K +M ED+V+LF +M + P +
Sbjct: 274  RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP-Y 332

Query: 626  KPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEA 447
            KP    C  +L ++S     ++     V + ++S G  + K VYDG HR LT  GRFDEA
Sbjct: 333  KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392

Query: 446  EKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEG 267
            EK+M+ M   GF PDNITYSQ+I+GLC+A   ++A  VL EM++ GC PDIK+WTILI+G
Sbjct: 393  EKIMKAMKNAGFEPDNITYSQVIFGLCKAGSFEDACNVLDEMEENGCIPDIKSWTILIQG 452

Query: 266  HTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKP 87
            H    E DRAL   ++M+     AD   +  L+     + R   AY LL+  IE+  ++P
Sbjct: 453  HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512

Query: 86   SAYTFREMIMRLAKAGMYTEA 24
               TF+ +I +L  A    EA
Sbjct: 513  WQATFKTLIEKLLGARRLEEA 533


>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
          Length = 646

 Score =  224 bits (570), Expect = 5e-56
 Identities = 124/321 (38%), Positives = 176/321 (54%), Gaps = 3/321 (0%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTLY--PGNALNFFEWXXXXXXXXXXXSVYNAML 807
            EW    +++L  +     D+FV   LK L   P  AL+FF W             YNA+ 
Sbjct: 230  EWSAGIEKELGELKITLSDNFVVRVLKELRICPSKALSFFHWVGQSSGYEHNTITYNAVA 289

Query: 806  RALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQW 627
            R L +      FW V EEMKG G  +D DT++ +  ++ K +M ED+V+L+  M + P +
Sbjct: 290  RILAQADSIGEFWSVIEEMKGAGHELDLDTYIKITRQFQKSKMMEDAVKLYELMMDGP-Y 348

Query: 626  KPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEA 447
            KP A  C  +L ++S     ++D    V   F+S G  + K VYDG HR LT+AG FDEA
Sbjct: 349  KPSAQDCSMLLRSISANDKPDLDMVFRVAKKFESAGNTLSKAVYDGIHRSLTSAGSFDEA 408

Query: 446  EKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEG 267
            EK+ + M   G+ PDNITYSQL++GLC+AKR +EA +VL EM+  GC PDI TWTILI+G
Sbjct: 409  EKITKVMRNAGYEPDNITYSQLVFGLCKAKRLEEACKVLDEMEANGCVPDIMTWTILIQG 468

Query: 266  HTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKP 87
            H    E D AL   ++M+  GC AD   +  L+     + +   AY LL+  +    ++P
Sbjct: 469  HCAANEVDTALVCFAKMIEKGCDADADLLDVLINGFLKQRKIEGAYKLLIEMVNMTRLRP 528

Query: 86   SAYTFREMIMRLAKAGMYTEA 24
               T++ +I  L       EA
Sbjct: 529  WQATYKNLIENLLGVRKLDEA 549


>ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Capsella rubella]
            gi|565465717|ref|XP_006290750.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
            gi|482559456|gb|EOA23647.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
            gi|482559457|gb|EOA23648.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
          Length = 618

 Score =  221 bits (564), Expect = 3e-55
 Identities = 124/322 (38%), Positives = 184/322 (57%), Gaps = 4/322 (1%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXSV-YNAM 810
            +W  E +++L  +  V  D+FV   LK L  +P  AL FF W           +V YNA 
Sbjct: 207  DWSCEVEKELQEMKLVLSDNFVIRVLKELRDHPLKALAFFNWVGGSSSGYQHSTVTYNAA 266

Query: 809  LRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQ 630
            LR L +      FW V +EMK  G+ MD DT++ V  ++ K +M  ++V+L+ +M + P 
Sbjct: 267  LRVLTRPNSVAEFWNVVDEMKIAGYEMDLDTYIRVSRQFQKSRMMTEAVKLYEYMMDGP- 325

Query: 629  WKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDE 450
            +KP+   C  +L +LS     ++D    V   F+S G  + K VYDG HR LT+ GRFDE
Sbjct: 326  FKPLVHDCSTLLRSLSAGPNPDLDLVFRVSRKFESSGNSLSKAVYDGIHRSLTSVGRFDE 385

Query: 449  AEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIE 270
            AE++++ M    + PDNITYSQL++GLC+AKR +EAR VL +M+ +GC+PDIKTWTILI+
Sbjct: 386  AEEIIKAMRNASYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCSPDIKTWTILIQ 445

Query: 269  GHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMK 90
            GH    E D+A A  + M+  G   D   +  L+     +NR   AY  L+  +   N++
Sbjct: 446  GHCKNNELDKAFACFANMLEKGFDVDSDLLEVLIGGFLSQNRIEGAYKFLMEMVRNANVR 505

Query: 89   PSAYTFREMIMRLAKAGMYTEA 24
            P   T++ +I +L +     EA
Sbjct: 506  PWQSTYKILIDKLLEIKKGEEA 527


>gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]
          Length = 627

 Score =  221 bits (562), Expect = 4e-55
 Identities = 119/325 (36%), Positives = 176/325 (54%), Gaps = 5/325 (1%)
 Frame = -3

Query: 974  WCNETKEKLDGISDVSEDDFVSALKTLYPGN-----ALNFFEWXXXXXXXXXXXSVYNAM 810
            W  + + KL  ++    D+ V  +     G      A  FF+W             YN +
Sbjct: 216  WGEKVEAKLREMNIAVSDNLVLRILKQLRGQGCAVKAYRFFKWIESSSDFEHTTVTYNGV 275

Query: 809  LRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQ 630
            LR L +E+  + FW V  EM   GF +D DT+V V   + K  M+ED V+L+  M ++P 
Sbjct: 276  LRILCREESIDEFWNVFSEMNAAGFRLDIDTYVKVSRSFQKNAMFEDGVKLYEHMMDSP- 334

Query: 629  WKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDE 450
            +KP    C  +L ALS     ++     VI+ F + G  + K +YDG HR LT  G+F+E
Sbjct: 335  YKPSVSECNYLLQALSRHGSPDLGLIDRVIEKFVAGGNSLSKTLYDGIHRSLTRLGKFEE 394

Query: 449  AEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIE 270
            AE ++E+M + GF PDN+TYSQL++GLC+  R DEA  VL  M+K GC PDI TWTILI 
Sbjct: 395  AEGIVEKMRENGFEPDNVTYSQLVFGLCKFDRFDEAAGVLESMEKWGCKPDIMTWTILIR 454

Query: 269  GHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMK 90
            GH   GETD+A+   + M+  G   D   +  ++  L  K+R  DA+ LL+   E+  ++
Sbjct: 455  GHFKGGETDKAMLHFARMMEKGFDPDADLLEAIVDELSKKSRAPDAFRLLVELAEKLKLR 514

Query: 89   PSAYTFREMIMRLAKAGMYTEANKI 15
            P   TF+ +I +L     + EA ++
Sbjct: 515  PWQSTFKNLIQQLLDGRRFEEAVRL 539


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  221 bits (562), Expect = 4e-55
 Identities = 121/320 (37%), Positives = 179/320 (55%), Gaps = 3/320 (0%)
 Frame = -3

Query: 974  WCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXSVYNAMLR 804
            W +E ++KL  + +   D+FV   L+ L  YP  AL FF+W             YN + R
Sbjct: 214  WSSEVEKKLGELKNSFSDNFVLHVLRELRGYPLKALRFFQWVGECPGYEHSSITYNVIAR 273

Query: 803  ALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWK 624
             LG++     FW + EEMK  G  MD DT++ +  ++ K +M ED+V+L+  M + P +K
Sbjct: 274  VLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKISRQFQKNKMLEDAVKLYEIMMDGP-YK 332

Query: 623  PVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAE 444
            P    C  +L ++S     ++     V + +++ G  + K VYDG HR LT+ GRFDEA 
Sbjct: 333  PSVQDCTMLLRSISLSSNPDLALVFRVTEKYEAVGNSLCKAVYDGIHRSLTSVGRFDEAG 392

Query: 443  KVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEGH 264
            K+ME M   G  PDNITYSQL+YGLC+A++ +EA ++L EM+  GC PDIKTWTILI+GH
Sbjct: 393  KIMESMRSAGCEPDNITYSQLVYGLCKARKLEEACKLLDEMEACGCVPDIKTWTILIQGH 452

Query: 263  TNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKPS 84
                E D+AL   ++M+   C AD   +  L+     + R   AY LL+  +   ++ P 
Sbjct: 453  CAAKEVDKALICFAKMMEKNCDADADLLEVLINGFLSQKRIDGAYKLLVEMVNTAHLVPW 512

Query: 83   AYTFREMIMRLAKAGMYTEA 24
              T++ MI +L       EA
Sbjct: 513  QATYKLMINKLLGVRKLEEA 532


>ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 642

 Score =  218 bits (554), Expect = 4e-54
 Identities = 121/323 (37%), Positives = 179/323 (55%), Gaps = 5/323 (1%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTL----YPGNALNFFEWXXXXXXXXXXXSVYNA 813
            EW  E + +L  +     D+FV   LK L    YP  A +FF+W             YN 
Sbjct: 213  EWGVEVERQLGEMKLPVSDNFVLRVLKELREIGYPLKAFSFFKWVARNLDFQHTTITYNG 272

Query: 812  MLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENP 633
            +LR L +E+  E FW V +EM   GF +D DT++ +   + K +M +D+V L+  M +  
Sbjct: 273  ILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAVELYELMMDG- 331

Query: 632  QWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFD 453
            Q+KP  G C  +L +++     ++D    V++ F++ G    K++YD  HRCLT  GRF+
Sbjct: 332  QFKPSLGECNILLRSIAQSHPSDLDLLFRVVEKFEAAGHSRSKIIYDVIHRCLTNLGRFE 391

Query: 452  EAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILI 273
            EAEK+ E M   GF PDNITYSQLIYGLC+ +R +EA +V+  M++ GC PDIKTWT+LI
Sbjct: 392  EAEKITEAMRDAGFEPDNITYSQLIYGLCKVRRLEEASKVIDVMEECGCIPDIKTWTVLI 451

Query: 272  EGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNM 93
            +GH   GE D+AL   ++M+      D   +  LL     + R   AY LL   + +  M
Sbjct: 452  QGHCFAGEVDKALFCFAKMMERNVDTDADLLDVLLNGFLSQRRVFGAYQLLTELVNKFQM 511

Query: 92   KPSAYTFREMIMRLAKAGMYTEA 24
            +P   T++ +I +L     + EA
Sbjct: 512  RPWQATYKLVIQKLLGERKFEEA 534


>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297323443|gb|EFH53864.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 618

 Score =  217 bits (552), Expect = 6e-54
 Identities = 126/322 (39%), Positives = 182/322 (56%), Gaps = 4/322 (1%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXSV-YNAM 810
            +W  E + +L  ++ V  D+FV   LK L  +P  AL FF W           +V YNA 
Sbjct: 207  DWSCEVERELQEMNLVLSDNFVIRVLKELREHPLKALAFFHWVGGSSSGYQHSTVTYNAA 266

Query: 809  LRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQ 630
            LR L +      FW V +EMK  G  MD DT++ V  ++ K +M  ++V+L+ +M + P 
Sbjct: 267  LRVLARPNSVAEFWSVVDEMKTAGHEMDLDTYIKVSRQFQKSRMITETVKLYEYMMDGP- 325

Query: 629  WKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDE 450
            +KP    C  +L  LS +   ++D    V   ++S G  + K VYDG HR LT+ GRFDE
Sbjct: 326  FKPSIQDCSLLLRYLSARPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDE 385

Query: 449  AEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIE 270
            AE++ + M   G+ PDNITYSQL++GLC+AKR +EAR VL +M+ +GC PDIKTWTILI+
Sbjct: 386  AEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQ 445

Query: 269  GHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMK 90
            GH    E DRALA  + M+  G   D   +  L+     +NR   A   L+  ++  N+K
Sbjct: 446  GHCKNNELDRALACFANMLEKGFDIDSNLLDVLIDGFLIQNRIEGASIFLMEMVKNANVK 505

Query: 89   PSAYTFREMIMRLAKAGMYTEA 24
            P   T++ +I +L +     EA
Sbjct: 506  PWQSTYKRLIDKLLEIKKGKEA 527


>ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutrema salsugineum]
            gi|557105401|gb|ESQ45735.1| hypothetical protein
            EUTSA_v10010209mg [Eutrema salsugineum]
          Length = 617

 Score =  216 bits (549), Expect = 1e-53
 Identities = 123/322 (38%), Positives = 179/322 (55%), Gaps = 4/322 (1%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXSV-YNAM 810
            +W  E + KL  +     D+FV   LK L  +P  AL FF W           ++ YNA 
Sbjct: 207  DWSYEVESKLQDMKLALSDNFVIRVLKELRDHPLKALAFFHWVGGSSSGYKHSTITYNAA 266

Query: 809  LRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQ 630
            LR L +      FW V +EMK  G  +D DT++ V+ ++ K +M  ++V+L+  M + P 
Sbjct: 267  LRVLARPNSVAEFWSVVDEMKVAGHEVDLDTYIKVLRQFQKSRMMIEAVKLYELMMDGP- 325

Query: 629  WKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDE 450
            +KP A  C  +L +LS     ++D    V   ++S G  + K VYDG HR LT+ GRFDE
Sbjct: 326  FKPSAQDCSLLLRSLSAGHKPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDE 385

Query: 449  AEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIE 270
            AE++++ M   G+ PDNITYSQL++GLC+AKR +EAR VL +M+ +GC PDIKTWTILI+
Sbjct: 386  AEEIIKAMRDSGYEPDNITYSQLVFGLCKAKRLEEARGVLEQMEAQGCFPDIKTWTILIQ 445

Query: 269  GHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMK 90
            GH    E D+A A    M+  G   D   +  L+     +NR   A   L+  +   N+K
Sbjct: 446  GHCKNSEVDQAFACFGNMLEKGFDIDSDLLAVLVNGFLSQNRIEGACKFLMEMVRNANVK 505

Query: 89   PSAYTFREMIMRLAKAGMYTEA 24
            P   T++ +I +L +     EA
Sbjct: 506  PWQNTYKALIDKLLEIKKGEEA 527


>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Solanum lycopersicum]
          Length = 642

 Score =  215 bits (548), Expect = 2e-53
 Identities = 120/324 (37%), Positives = 179/324 (55%), Gaps = 5/324 (1%)
 Frame = -3

Query: 980  KEWCNETKEKLDGISDVSEDDFV-SALKTLY----PGNALNFFEWXXXXXXXXXXXSVYN 816
            +EW  E + +L  +     D+FV   LK L     P  A +FF+W             YN
Sbjct: 212  QEWGVEVERQLGEMKLSVSDNFVLRVLKELREVGNPLKAFSFFKWVARNLDFQHSTVTYN 271

Query: 815  AMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAEN 636
             +LR L +E+  E FW V +EM   GF +D DT++ +   + K +M +D+V L+  M + 
Sbjct: 272  GILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAVELYELMMDG 331

Query: 635  PQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRF 456
             Q+KP  G C  +L +++     ++D    V++ F++ G    K++YD  HRCLT  GRF
Sbjct: 332  -QFKPSLGECNILLRSIAQSYSSDLDLLFRVVEKFEAAGHSRSKIIYDVIHRCLTNLGRF 390

Query: 455  DEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTIL 276
            +EAEK+ E M   GF PDNITYSQLIYGLC+ +R +EA +V+  M++ GC PDIKTWT+L
Sbjct: 391  EEAEKITEAMRDAGFEPDNITYSQLIYGLCKVRRLEEASKVIDVMEECGCIPDIKTWTVL 450

Query: 275  IEGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQN 96
            I+GH   GE D+AL   ++M+      D   +  LL     + R   AY LL   + +  
Sbjct: 451  IQGHCFAGEVDKALFCFAKMMEKNVDTDADLLDVLLNGFLSQRRVFGAYQLLTELVNKFQ 510

Query: 95   MKPSAYTFREMIMRLAKAGMYTEA 24
            M+P   T++ +I +L     + EA
Sbjct: 511  MRPWQATYKLVIQKLLGERKFEEA 534


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cucumis sativus]
            gi|449524136|ref|XP_004169079.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  214 bits (546), Expect = 3e-53
 Identities = 114/321 (35%), Positives = 180/321 (56%), Gaps = 3/321 (0%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTLY--PGNALNFFEWXXXXXXXXXXXSVYNAML 807
            +W N+   KL+ +     D+FV   LK L   P  AL+FF W             YNA+ 
Sbjct: 206  DWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDYDHNTVSYNAIA 265

Query: 806  RALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQW 627
            R LG++   E FW V EEMK     +D DT++ +  ++ K +M  ++V+L+  M + P +
Sbjct: 266  RVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVKLYELMMDGP-Y 324

Query: 626  KPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEA 447
            KP    C  +L  ++     ++     V   F++ G  + K +YDG HR LT+ G+FD+A
Sbjct: 325  KPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDA 384

Query: 446  EKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEG 267
            E +++ M   G+ PDN+TYSQL++GLC+A+R +EAR+VL EM+ +GC PDIKTWTILI+G
Sbjct: 385  ENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQG 444

Query: 266  HTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKP 87
            H N  E D AL   ++M+   C  D   +  L+    ++ +   AY LL+    + +++P
Sbjct: 445  HCNANELDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRP 504

Query: 86   SAYTFREMIMRLAKAGMYTEA 24
               T++++I  L +     EA
Sbjct: 505  WQATYKQLIKNLLEVRKLEEA 525


>ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Brachypodium distachyon]
          Length = 585

 Score =  213 bits (543), Expect = 7e-53
 Identities = 116/313 (37%), Positives = 178/313 (56%), Gaps = 2/313 (0%)
 Frame = -3

Query: 956  EKLDGISDVSEDDFVSALKTLY--PGNALNFFEWXXXXXXXXXXXSVYNAMLRALGKEKI 783
            E +D +  ++E      L+ L   P  AL FF W             YNAM R LG+E+ 
Sbjct: 176  EGVDLLLPLTETTVAKVLRELRDCPVKALGFFRWAGRQKGYTHGSVAYNAMARVLGREES 235

Query: 782  TENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICY 603
             + FW++ +EMK  G  +D DT+V +  ++ KR M  ++V L+  M + P +KP      
Sbjct: 236  VQEFWELIQEMKADGIYLDIDTYVKLNRQFQKRHMMTEAVELYELMMDGP-YKPSKQDGP 294

Query: 602  RILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEMT 423
             +L  ++     +++ A  V+  F++      K V+DG HR LT+ GRFDEA +VME M 
Sbjct: 295  VLLRRIALGPSPDLELAHRVVRKFEAVYEFKTKDVFDGIHRALTSNGRFDEAAEVMESMR 354

Query: 422  KEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEGHTNTGETD 243
             EG  PDNITYSQL++GLC+A + DEAR+VL EM+  GC PD+KTWT+LI+GH   GE D
Sbjct: 355  SEGHQPDNITYSQLVFGLCKANKCDEARKVLVEMENEGCAPDLKTWTMLIQGHCTAGEVD 414

Query: 242  RALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKPSAYTFREM 63
            +AL  L+EM+ +   AD   +  ++  LC++++   AY L +  +++  + P   T++ +
Sbjct: 415  KALQYLTEMIENNLDADADLLDVMVRGLCNQDKVDAAYTLFVEMVDKAQLNPWQGTYKHI 474

Query: 62   IMRLAKAGMYTEA 24
            I  L +     EA
Sbjct: 475  ISELLRVKKLEEA 487


>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g48250, chloroplastic; Flags: Precursor
            gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
            thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  213 bits (541), Expect = 1e-52
 Identities = 124/324 (38%), Positives = 178/324 (54%), Gaps = 6/324 (1%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTL--YPGNALNFFEWXXXXXXXXXXXS---VYN 816
            +W  E + +L  +  V  D+FV   LK L  +P  AL FF W                YN
Sbjct: 208  DWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYN 267

Query: 815  AMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAEN 636
            A LR L +      FW V +EMK  G+ MD DT++ V  ++ K +M  ++V+L+ +M + 
Sbjct: 268  AALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDG 327

Query: 635  PQWKPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRF 456
            P +KP    C  +L  LS     ++D    V   ++S G  + K VYDG HR LT+ GRF
Sbjct: 328  P-FKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRF 386

Query: 455  DEAEKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTIL 276
            DEAE++ + M   G+ PDNITYSQL++GLC+AKR +EAR VL +M+ +GC PDIKTWTIL
Sbjct: 387  DEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTIL 446

Query: 275  IEGHTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQN 96
            I+GH    E D+ALA  + M+  G   D   +  L+      N+   A   L+  ++  N
Sbjct: 447  IQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNAN 506

Query: 95   MKPSAYTFREMIMRLAKAGMYTEA 24
            +KP   T++ +I +L K     EA
Sbjct: 507  VKPWQSTYKLLIDKLLKIKKSEEA 530


>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 630

 Score =  209 bits (533), Expect = 1e-51
 Identities = 120/324 (37%), Positives = 179/324 (55%), Gaps = 3/324 (0%)
 Frame = -3

Query: 977  EWCNETKEKLDGIS-DVSEDDFVSALKTLY--PGNALNFFEWXXXXXXXXXXXSVYNAML 807
            EW ++ +++L  I  ++SE   V  L+ L   P  AL FF W             YN M 
Sbjct: 212  EWSDKVEKELGEIDVELSEKFVVRVLRDLRVCPLKALRFFRWVEQCAGYEHNSVTYNGMS 271

Query: 806  RALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQW 627
              LG+      FW V EEMK  G  +D DT++ +  ++ K +M ED+V+L+  M + P +
Sbjct: 272  LVLGQASSIGEFWSVIEEMKVAGQELDLDTYIKLSRQFQKSKMVEDAVKLYELMMDGP-Y 330

Query: 626  KPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEA 447
            KP       +L ++S  +  ++D    V+  F+S G  + K VYDG HR LT  GRFDEA
Sbjct: 331  KPSVQDVSILLRSISANERPDMDLVFRVVKKFESAGFTLSKAVYDGIHRSLTNLGRFDEA 390

Query: 446  EKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEG 267
            E  +  M   GF PDNITYSQ+++GLC+AK+ DEA ++L +M++ GC PDIKTW ILI+G
Sbjct: 391  EDTLIAMRNAGFEPDNITYSQVVFGLCKAKKLDEACKLLDDMEENGCVPDIKTWMILIQG 450

Query: 266  HTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKP 87
            H    E D+AL   ++M+   C AD   +  L+  L  + +   AY LL+  +   +++P
Sbjct: 451  HCAANEIDKALICFAKMMEKECKADADILDVLINGLIKQAKVDGAYKLLIEMLNTAHVRP 510

Query: 86   SAYTFREMIMRLAKAGMYTEANKI 15
               TF+ +I  L  A    EA ++
Sbjct: 511  WQATFKNLIQNLLGARKLEEAMEL 534


>ref|XP_004971408.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Setaria italica]
          Length = 562

 Score =  206 bits (525), Expect = 9e-51
 Identities = 112/307 (36%), Positives = 171/307 (55%), Gaps = 5/307 (1%)
 Frame = -3

Query: 944  GISDVSEDDFVSALKTL--YPGNALNFFEWXXXXXXXXXXXSVYNAMLRALGKEKITENF 771
            G+  ++E      L+ L  YP  AL FF W             YNAM RALG+E+    F
Sbjct: 158  GLLPLTETAVAKVLRELRDYPTKALAFFRWAGRQQGYKHGSVAYNAMARALGREESVPEF 217

Query: 770  WKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQWKPVAGICYRILC 591
            W + +EMK  G  +D DT+V +   + KR M  ++V L+  M + P +KP       I+ 
Sbjct: 218  WDLIQEMKAAGVHVDIDTYVKLSRNFQKRHMIREAVELYEHMMDGP-FKPAQKDAPLIIR 276

Query: 590  ALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEMTKEGF 411
             +S     ++D A  V+  ++S      K ++D  HR LT+ G FDEA +V++ M  EG 
Sbjct: 277  RISLSPSPDLDLAIRVVSKYESVWDKKTKELFDAIHRVLTSNGSFDEAAEVVQRMRAEGH 336

Query: 410  APDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEGHTNTGETDRALA 231
             PDN+TYSQL+YGLC+A + D+AR+V  EM+  GC PD+KTWT+L++GH   G+ DRAL 
Sbjct: 337  QPDNVTYSQLVYGLCKAGKLDDARKVFDEMEAEGCIPDLKTWTMLVQGHCAAGDVDRALQ 396

Query: 230  LLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKPSAYTFREMI--- 60
             L+EM+     AD   +  ++  LC   +   AY L +  +++ +++P   T++ +I   
Sbjct: 397  CLTEMIDKNLDADADLLDVMVKGLCSHEKVDAAYTLFVQMVDKAHLRPWQGTYKHVIDEL 456

Query: 59   MRLAKAG 39
            +RL K G
Sbjct: 457  LRLKKLG 463


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Glycine max]
          Length = 635

 Score =  204 bits (518), Expect = 6e-50
 Identities = 114/321 (35%), Positives = 171/321 (53%), Gaps = 3/321 (0%)
 Frame = -3

Query: 977  EWCNETKEKLDGISDVSEDDFV-SALKTLY--PGNALNFFEWXXXXXXXXXXXSVYNAML 807
            EW +E   +L  +     D+FV   LK L   P  A  FF W             YNA+ 
Sbjct: 212  EWGDEVVGELAKLEIQLSDNFVIRVLKELRKTPLKAYKFFHWVGKQSGYEHDTVTYNAVA 271

Query: 806  RALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRLFTWMAENPQW 627
            R L + +  E FW V EEMK  G  +D DT++ +  +  + +M ED+V+L+  M +    
Sbjct: 272  RVLPRAESIEEFWSVIEEMKRVGHELDIDTYIKITRQLQRNRMMEDAVKLYELMMDG-SC 330

Query: 626  KPVAGICYRILCALSHQQCLNVDAAKTVIDVFKSRGGDMEKVVYDGYHRCLTAAGRFDEA 447
            KP+   C  +L ++S     N+D    V   ++S G  + K +YDG HR LT+AG FDEA
Sbjct: 331  KPLVQDCNMLLKSISANDKPNLDLVFRVAKKYESTGHTLSKAIYDGIHRSLTSAGNFDEA 390

Query: 446  EKVMEEMTKEGFAPDNITYSQLIYGLCRAKRSDEAREVLHEMKKRGCNPDIKTWTILIEG 267
            E ++  M   G+ PDNITYSQ+++GLC+ +R +EA +VL +M+   C PDIKTWTILI+G
Sbjct: 391  ENIVRTMRNAGYEPDNITYSQMVFGLCKMRRFEEACKVLEDMESSRCIPDIKTWTILIQG 450

Query: 266  HTNTGETDRALALLSEMVASGCAADEYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKP 87
            H +  E D+AL   ++M+  GC  D   +  L      + R   AY L+     +  + P
Sbjct: 451  HCSANEVDKALLCFAKMIEKGCDPDADLLDVLADGFLSQKRIEGAYELVAEISRKCRISP 510

Query: 86   SAYTFREMIMRLAKAGMYTEA 24
               T++++I +L     + EA
Sbjct: 511  WQATYKKLIEKLLGVMKFEEA 531



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 77/359 (21%), Positives = 142/359 (39%), Gaps = 34/359 (9%)
 Frame = -3

Query: 989  LKDKEWCNETKEKLDG-ISDVSEDDFVSALKTL--YPGNALNFFEWXXXXXXXXXXXSVY 819
            L   +W    + KL+     +  +  +  +K L   P  A  FF W           SVY
Sbjct: 71   LLTNDWSQALELKLENRFPSMPHETVLYVIKRLDKNPEKASCFFNWVCKKVWFRPSCSVY 130

Query: 818  NAMLRALGKEKITENFWKVAEEMKGHGFLMDEDTFVPVISRYNKRQMYEDSVRL---FTW 648
            + ++R L  +   + FW     MK +GF +DE+T++ +   + + +M  DSV L   +  
Sbjct: 131  SLIVRILAAKDTMKQFWVTLRMMKENGFFLDEETYLTISVGFKREKMDSDSVALTHFYNR 190

Query: 647  MAE----------------NPQW-KPVAGICYRILCALSHQQCLNV--DAAKTVIDVF-- 531
            M E                  +W   V G   ++   LS    + V  +  KT +  +  
Sbjct: 191  MLEENAMQSVVSNVVGIISRSEWGDEVVGELAKLEIQLSDNFVIRVLKELRKTPLKAYKF 250

Query: 530  -----KSRGGDMEKVVYDGYHRCLTAAGRFDEAEKVMEEMTKEGFAPDNITYSQLIYGLC 366
                 K  G + + V Y+   R L  A   +E   V+EEM + G   D  TY ++   L 
Sbjct: 251  FHWVGKQSGYEHDTVTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIKITRQLQ 310

Query: 365  RAKRSDEAREVLHEMKKRGCNPDIKTWTILIE--GHTNTGETDRALALLSEMVASGCAAD 192
            R +  ++A ++   M    C P ++   +L++     +    D    +  +  ++G    
Sbjct: 311  RNRMMEDAVKLYELMMDGSCKPLVQDCNMLLKSISANDKPNLDLVFRVAKKYESTGHTLS 370

Query: 191  EYTIRGLLFHLCDKNREMDAYNLLLSSIEEQNMKPSAYTFREMIMRLAKAGMYTEANKI 15
            +    G+   L       +A N ++ ++     +P   T+ +M+  L K   + EA K+
Sbjct: 371  KAIYDGIHRSLTSAGNFDEAEN-IVRTMRNAGYEPDNITYSQMVFGLCKMRRFEEACKV 428