BLASTX nr result

ID: Ephedra25_contig00004752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00004752
         (2246 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi...   818   0.0  
emb|CBI29835.3| unnamed protein product [Vitis vinifera]              818   0.0  
ref|XP_003520516.2| PREDICTED: pentatricopeptide repeat-containi...   802   0.0  
ref|XP_006421326.1| hypothetical protein CICLE_v10004305mg [Citr...   801   0.0  
ref|XP_006492925.1| PREDICTED: pentatricopeptide repeat-containi...   800   0.0  
ref|XP_006492924.1| PREDICTED: pentatricopeptide repeat-containi...   800   0.0  
gb|ESW34180.1| hypothetical protein PHAVU_001G131500g [Phaseolus...   796   0.0  
ref|XP_006850541.1| hypothetical protein AMTR_s00159p00058480 [A...   795   0.0  
ref|XP_006350181.1| PREDICTED: pentatricopeptide repeat-containi...   794   0.0  
ref|XP_004236606.1| PREDICTED: pentatricopeptide repeat-containi...   791   0.0  
gb|EOY09212.1| Tetratricopeptide repeat (TPR)-like superfamily p...   790   0.0  
ref|XP_002308939.2| pentatricopeptide repeat-containing family p...   788   0.0  
gb|EMJ05463.1| hypothetical protein PRUPE_ppa001801mg [Prunus pe...   786   0.0  
ref|XP_004493484.1| PREDICTED: pentatricopeptide repeat-containi...   786   0.0  
ref|XP_004493483.1| PREDICTED: pentatricopeptide repeat-containi...   786   0.0  
ref|XP_003625140.1| Pentatricopeptide repeat-containing protein ...   781   0.0  
ref|XP_004304344.1| PREDICTED: pentatricopeptide repeat-containi...   779   0.0  
gb|EXC04358.1| hypothetical protein L484_015985 [Morus notabilis]     764   0.0  
ref|XP_002529506.1| pentatricopeptide repeat-containing protein,...   763   0.0  
ref|XP_004955810.1| PREDICTED: pentatricopeptide repeat-containi...   763   0.0  

>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like
            [Vitis vinifera]
          Length = 848

 Score =  818 bits (2114), Expect = 0.0
 Identities = 405/730 (55%), Positives = 531/730 (72%)
 Frame = +1

Query: 55   ELPKKVVRVDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEVVYEALKVD 234
            E  KKVV VDYD G H+    V GL K  + K YR R+ + R Q DW+VSEVV   LK++
Sbjct: 49   EEKKKVVFVDYDNGKHQVSTHVSGLRKADIPKHYRLRVEADRFQKDWSVSEVVERLLKLN 108

Query: 235  PQGDIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNML 414
               D+E LLN W GRF RKNFPLLIRE  +IG+L+H+++VF WMKNQ NY ARNDIYNM+
Sbjct: 109  HWDDVEGLLNRWVGRFSRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMM 168

Query: 415  IRLHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAV 594
            IRLHAR NI DQARGLFFEMQKWRCKPD ETYNALI+ HG+AGQWRWAMNI DDMLR A+
Sbjct: 169  IRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI 228

Query: 595  PPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNGTQYKKALS 774
            PP+RS+YN LINACGSSG+W+EAL VCK+MTENGVGPDLVTHN VLSA K G QY K LS
Sbjct: 229  PPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLS 288

Query: 775  YFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADVVTFNTIMK 954
            YFELMK   ++PDT TLNI+I CLV L Q  KA++ F SMK    S+C  DVVTF TI+ 
Sbjct: 289  YFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKE-KRSECYPDVVTFTTIIH 347

Query: 955  GYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKNGFRQ 1134
             Y+  G I++ ++ F  MLAEG+KPNIVSYN LI AYA  GM  EA  +FN ++KNGF  
Sbjct: 348  LYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHP 407

Query: 1135 DTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGEFEEAKSIL 1314
            D VSYTSLLNAYG+ G+P+KA ++F+LM + + K N+V+Y++LI AYGS+G   EA  IL
Sbjct: 408  DVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEIL 467

Query: 1315 DEMICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTAFMNG 1494
             EM   G+QPN+V+I  LL AC    Q  +I S++  A   G++LN  AYN+A+ ++++ 
Sbjct: 468  HEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSV 527

Query: 1495 EMYERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELKVNANVEVY 1674
              Y++ALSLY  ++ K +KP  VT+ +LI+G CK+  Y EA  F +EM +LK+  + EVY
Sbjct: 528  GEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVY 587

Query: 1675 TALIDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAYSLFQAMED 1854
            +++I AY KQG V EAE++F KM   GC P+V+TYT M +AY   E W+KA +LF  ME 
Sbjct: 588  SSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMET 647

Query: 1855 NNIEADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISACSKVRDWKM 2034
            ++++ D+IA ++LM   NKG QP KVL+LA+ M+E+ + F+    FE++SACS +R+W+ 
Sbjct: 648  DDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWRE 707

Query: 2035 VDALMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTRETNEILAA 2214
            +  L++ +EP+++ +S  +LNQ+L F+GKSGK+E MMK++YK+  SG +    T  IL  
Sbjct: 708  IIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLK 767

Query: 2215 NISAAGKFKK 2244
            N+ AAG ++K
Sbjct: 768  NLLAAGNWRK 777



 Score =  191 bits (484), Expect = 2e-45
 Identities = 139/535 (25%), Positives = 247/535 (46%), Gaps = 2/535 (0%)
 Frame = +1

Query: 355  FNWMKNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEMQKWR--CKPDVETYNALIHV 528
            F  MK   N R      N++I    +     +A  +F  M++ R  C PDV T+  +IH+
Sbjct: 290  FELMKGT-NIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHL 348

Query: 529  HGKAGQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPD 708
            +   GQ       F+ ML   + PN  SYN LI A  S G  +EA  V  ++ +NG  PD
Sbjct: 349  YSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPD 408

Query: 709  LVTHNTVLSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFY 888
            +V++ ++L+A     + +KA+  FELM+    KP+  + N +I    S     +AVE  +
Sbjct: 409  VVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILH 468

Query: 889  SMKRIGASDCKADVVTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYA 1068
             M+R G    + ++V+  T++      G    ++SV       GIK N  +YN+ I +Y 
Sbjct: 469  EMERNGV---QPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYL 525

Query: 1069 YLGMCNEALEIFNLLEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVV 1248
             +G  ++AL ++  +     + D V+Y  L++   +  +  +A    D M  L +  +  
Sbjct: 526  SVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKE 585

Query: 1249 TYSSLIYAYGSQGEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSIIELA 1428
             YSS+I AY  QG+  EA+S+  +M   G +P+V+T + ++ A   +   ++  ++    
Sbjct: 586  VYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEM 645

Query: 1429 NNAGVQLNVNAYNAAMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGACKLRGY 1608
                VQ +  A ++ M AF  G    + L L E ++EK I  +  +F  +++    LR +
Sbjct: 646  ETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREW 705

Query: 1609 VEAQFFFNEMCELKVNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTM 1788
             E       M       ++ +   L+    K G +     +F K+VASG   N  TY+ +
Sbjct: 706  REIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSIL 765

Query: 1789 FNAYGKKEMWQKAYSLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQKM 1953
                     W+K   + Q ME+  ++     Y ++ S        E   ++ +++
Sbjct: 766  LKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSISSFAQNRSGAEYAAVIQERI 820



 Score =  155 bits (391), Expect = 9e-35
 Identities = 125/521 (23%), Positives = 226/521 (43%), Gaps = 75/521 (14%)
 Frame = +1

Query: 196  TVSEVVYEALKVDPQGDIESLLNHWAGRFHR-----KNFPLLIREFCKIGALKHAIRVFN 360
            T++ V+Y  +K+   G    + N    +          F  +I  +   G +++    FN
Sbjct: 304  TLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFN 363

Query: 361  WMKNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKA 540
             M  +   +     YN LI  +A   +  +A  +F E++K    PDV +Y +L++ +GK+
Sbjct: 364  TMLAE-GLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKS 422

Query: 541  GQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTH 720
            G+   AM +F+ M R    PN  SYN LI+A GS G   EA+ +  +M  NGV P++V+ 
Sbjct: 423  GKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSI 482

Query: 721  NTVLSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKR 900
             T+L+A     Q  K  S     + +G+K +T   N  I   +S+ +YDKA+  + +M+ 
Sbjct: 483  CTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMR- 541

Query: 901  IGASDCKADVVTFNTIMKG-----------------------------------YAAIGA 975
                  K D VT+N ++ G                                   Y+  G 
Sbjct: 542  --TKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQ 599

Query: 976  IKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKNGFRQDTVSYTS 1155
            + +  S+F  M   G +P++++Y  +I AY       +A  +F  +E +  + D+++ +S
Sbjct: 600  VTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSS 659

Query: 1156 LLNAYGRGGQPKKA--------------------------------KEIFDLMSKLNVKK 1239
            L+ A+ +GGQP K                                 +EI  L+  +    
Sbjct: 660  LMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSI 719

Query: 1240 NVVTY---SSLIYAYGSQGEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQID 1410
            +VV+    + L++  G  G+ E    +  +++ +G + N  T SILL     +   ++  
Sbjct: 720  SVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWRKYI 779

Query: 1411 SIIELANNAGVQLNVNAYNAAMTAFMNGEMYERALSLYEQI 1533
             +++    AG+Q +V  Y +  +   N    E A  + E+I
Sbjct: 780  EVLQWMEEAGLQPSVGMYRSISSFAQNRSGAEYAAVIQERI 820


>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  818 bits (2114), Expect = 0.0
 Identities = 405/730 (55%), Positives = 531/730 (72%)
 Frame = +1

Query: 55   ELPKKVVRVDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEVVYEALKVD 234
            E  KKVV VDYD G H+    V GL K  + K YR R+ + R Q DW+VSEVV   LK++
Sbjct: 49   EEKKKVVFVDYDNGKHQVSTHVSGLRKADIPKHYRLRVEADRFQKDWSVSEVVERLLKLN 108

Query: 235  PQGDIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNML 414
               D+E LLN W GRF RKNFPLLIRE  +IG+L+H+++VF WMKNQ NY ARNDIYNM+
Sbjct: 109  HWDDVEGLLNRWVGRFSRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMM 168

Query: 415  IRLHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAV 594
            IRLHAR NI DQARGLFFEMQKWRCKPD ETYNALI+ HG+AGQWRWAMNI DDMLR A+
Sbjct: 169  IRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI 228

Query: 595  PPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNGTQYKKALS 774
            PP+RS+YN LINACGSSG+W+EAL VCK+MTENGVGPDLVTHN VLSA K G QY K LS
Sbjct: 229  PPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLS 288

Query: 775  YFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADVVTFNTIMK 954
            YFELMK   ++PDT TLNI+I CLV L Q  KA++ F SMK    S+C  DVVTF TI+ 
Sbjct: 289  YFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKE-KRSECYPDVVTFTTIIH 347

Query: 955  GYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKNGFRQ 1134
             Y+  G I++ ++ F  MLAEG+KPNIVSYN LI AYA  GM  EA  +FN ++KNGF  
Sbjct: 348  LYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHP 407

Query: 1135 DTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGEFEEAKSIL 1314
            D VSYTSLLNAYG+ G+P+KA ++F+LM + + K N+V+Y++LI AYGS+G   EA  IL
Sbjct: 408  DVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEIL 467

Query: 1315 DEMICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTAFMNG 1494
             EM   G+QPN+V+I  LL AC    Q  +I S++  A   G++LN  AYN+A+ ++++ 
Sbjct: 468  HEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSV 527

Query: 1495 EMYERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELKVNANVEVY 1674
              Y++ALSLY  ++ K +KP  VT+ +LI+G CK+  Y EA  F +EM +LK+  + EVY
Sbjct: 528  GEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVY 587

Query: 1675 TALIDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAYSLFQAMED 1854
            +++I AY KQG V EAE++F KM   GC P+V+TYT M +AY   E W+KA +LF  ME 
Sbjct: 588  SSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMET 647

Query: 1855 NNIEADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISACSKVRDWKM 2034
            ++++ D+IA ++LM   NKG QP KVL+LA+ M+E+ + F+    FE++SACS +R+W+ 
Sbjct: 648  DDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWRE 707

Query: 2035 VDALMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTRETNEILAA 2214
            +  L++ +EP+++ +S  +LNQ+L F+GKSGK+E MMK++YK+  SG +    T  IL  
Sbjct: 708  IIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLK 767

Query: 2215 NISAAGKFKK 2244
            N+ AAG ++K
Sbjct: 768  NLLAAGNWRK 777



 Score =  191 bits (485), Expect = 1e-45
 Identities = 139/536 (25%), Positives = 248/536 (46%), Gaps = 2/536 (0%)
 Frame = +1

Query: 355  FNWMKNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEMQKWR--CKPDVETYNALIHV 528
            F  MK   N R      N++I    +     +A  +F  M++ R  C PDV T+  +IH+
Sbjct: 290  FELMKGT-NIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHL 348

Query: 529  HGKAGQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPD 708
            +   GQ       F+ ML   + PN  SYN LI A  S G  +EA  V  ++ +NG  PD
Sbjct: 349  YSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPD 408

Query: 709  LVTHNTVLSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFY 888
            +V++ ++L+A     + +KA+  FELM+    KP+  + N +I    S     +AVE  +
Sbjct: 409  VVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILH 468

Query: 889  SMKRIGASDCKADVVTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYA 1068
             M+R G    + ++V+  T++      G    ++SV       GIK N  +YN+ I +Y 
Sbjct: 469  EMERNGV---QPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYL 525

Query: 1069 YLGMCNEALEIFNLLEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVV 1248
             +G  ++AL ++  +     + D V+Y  L++   +  +  +A    D M  L +  +  
Sbjct: 526  SVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKE 585

Query: 1249 TYSSLIYAYGSQGEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSIIELA 1428
             YSS+I AY  QG+  EA+S+  +M   G +P+V+T + ++ A   +   ++  ++    
Sbjct: 586  VYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEM 645

Query: 1429 NNAGVQLNVNAYNAAMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGACKLRGY 1608
                VQ +  A ++ M AF  G    + L L E ++EK I  +  +F  +++    LR +
Sbjct: 646  ETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREW 705

Query: 1609 VEAQFFFNEMCELKVNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTM 1788
             E       M       ++ +   L+    K G +     +F K+VASG   N  TY+ +
Sbjct: 706  REIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSIL 765

Query: 1789 FNAYGKKEMWQKAYSLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQKMK 1956
                     W+K   + Q ME+  ++     Y ++ S        E   ++ ++++
Sbjct: 766  LKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSISSFAQNRSGAEYAAVIQERIE 821



 Score =  155 bits (392), Expect = 7e-35
 Identities = 125/522 (23%), Positives = 227/522 (43%), Gaps = 75/522 (14%)
 Frame = +1

Query: 196  TVSEVVYEALKVDPQGDIESLLNHWAGRFHR-----KNFPLLIREFCKIGALKHAIRVFN 360
            T++ V+Y  +K+   G    + N    +          F  +I  +   G +++    FN
Sbjct: 304  TLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFN 363

Query: 361  WMKNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKA 540
             M  +   +     YN LI  +A   +  +A  +F E++K    PDV +Y +L++ +GK+
Sbjct: 364  TMLAE-GLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKS 422

Query: 541  GQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTH 720
            G+   AM +F+ M R    PN  SYN LI+A GS G   EA+ +  +M  NGV P++V+ 
Sbjct: 423  GKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSI 482

Query: 721  NTVLSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKR 900
             T+L+A     Q  K  S     + +G+K +T   N  I   +S+ +YDKA+  + +M+ 
Sbjct: 483  CTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMR- 541

Query: 901  IGASDCKADVVTFNTIMKG-----------------------------------YAAIGA 975
                  K D VT+N ++ G                                   Y+  G 
Sbjct: 542  --TKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQ 599

Query: 976  IKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKNGFRQDTVSYTS 1155
            + +  S+F  M   G +P++++Y  +I AY       +A  +F  +E +  + D+++ +S
Sbjct: 600  VTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSS 659

Query: 1156 LLNAYGRGGQPKKA--------------------------------KEIFDLMSKLNVKK 1239
            L+ A+ +GGQP K                                 +EI  L+  +    
Sbjct: 660  LMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSI 719

Query: 1240 NVVTY---SSLIYAYGSQGEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQID 1410
            +VV+    + L++  G  G+ E    +  +++ +G + N  T SILL     +   ++  
Sbjct: 720  SVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWRKYI 779

Query: 1411 SIIELANNAGVQLNVNAYNAAMTAFMNGEMYERALSLYEQIK 1536
             +++    AG+Q +V  Y +  +   N    E A  + E+I+
Sbjct: 780  EVLQWMEEAGLQPSVGMYRSISSFAQNRSGAEYAAVIQERIE 821


>ref|XP_003520516.2| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like
            [Glycine max]
          Length = 837

 Score =  802 bits (2071), Expect = 0.0
 Identities = 398/724 (54%), Positives = 522/724 (72%), Gaps = 2/724 (0%)
 Frame = +1

Query: 79   VDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEV--VYEALKVDPQGDIE 252
            VDYD G HE   ++ GL KD ++ RYR R+   R Q DWTVSEV  +  +L +    D++
Sbjct: 44   VDYDRGQHEVSTKISGLRKDDIAARYRLRVAGNRFQMDWTVSEVAELVLSLNLSDDDDVD 103

Query: 253  SLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNMLIRLHAR 432
             LLN W GRF RKNFP LI+E  + G+++H  RVF W+KNQ NYRARNDIYNM+IRLHAR
Sbjct: 104  GLLNRWVGRFARKNFPFLIKELTQRGSIEHCNRVFRWLKNQKNYRARNDIYNMMIRLHAR 163

Query: 433  FNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAVPPNRSS 612
             N TDQARGLFFEMQ+WRCKPDVETYNA+I+ HG+AGQWRWAMNI DDMLR A+PP+RS+
Sbjct: 164  HNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRST 223

Query: 613  YNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNGTQYKKALSYFELMK 792
            YN LINACGSSG+W+EAL VCK+MTENGVGPDLVTHN +LSA K+G QY KALSYFELMK
Sbjct: 224  YNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMK 283

Query: 793  EKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADVVTFNTIMKGYAAIG 972
               ++PDT TLNI+I CLV L+QYDKA+E F SM+    S+C  DVVTF +I+  Y+  G
Sbjct: 284  GTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMRE-KKSECTPDVVTFTSIIHLYSVCG 342

Query: 973  AIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKNGFRQDTVSYT 1152
             +++  + F MM+AEG+KPNIVSYN LI AYA  GM NEA   FN +++NGFR D VSYT
Sbjct: 343  QVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYT 402

Query: 1153 SLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGEFEEAKSILDEMICA 1332
            SLLNAYGR  +P KA++IFD M +  +K N+V+Y++LI AYGS G   +A  IL EM   
Sbjct: 403  SLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQE 462

Query: 1333 GIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTAFMNGEMYERA 1512
            GIQPNVV+I  LL AC   S+  +ID+++  A   G++LN  AYNAA+ + MN   Y++A
Sbjct: 463  GIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKA 522

Query: 1513 LSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELKVNANVEVYTALIDA 1692
            + LY+ +++K IK   VT+ +LI+G CK+  Y EA  F  E+  LK+  + EVY++ I A
Sbjct: 523  IGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICA 582

Query: 1693 YVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAYSLFQAMEDNNIEAD 1872
            Y KQG + EAE+ F  M +SGCYP+VVTYT M +AY   E W+KAY+LF+ ME ++I+ D
Sbjct: 583  YSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLD 642

Query: 1873 NIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISACSKVRDWKMVDALME 2052
             IA A LM   NKG QP +VL LA+ M+E+ + FS+ + FE++SACS ++DW+    +++
Sbjct: 643  TIACAALMRSFNKGGQPGRVLSLAESMREKEIPFSDTIFFEMVSACSILQDWRTAVDMIK 702

Query: 2053 DLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTRETNEILAANISAAG 2232
             +EP+L  +S   LNQ L  +GKSGK+E M+K+++KM  SG      T  IL  N+ ++G
Sbjct: 703  YIEPSLPVISSGCLNQFLHSLGKSGKIETMLKLFFKMLASGADVNLNTYSILLKNLLSSG 762

Query: 2233 KFKK 2244
             ++K
Sbjct: 763  NWRK 766


>ref|XP_006421326.1| hypothetical protein CICLE_v10004305mg [Citrus clementina]
            gi|557523199|gb|ESR34566.1| hypothetical protein
            CICLE_v10004305mg [Citrus clementina]
          Length = 846

 Score =  801 bits (2068), Expect = 0.0
 Identities = 397/740 (53%), Positives = 526/740 (71%)
 Frame = +1

Query: 25   RGPQPQKKEWELPKKVVRVDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVS 204
            R P+P        ++   VDYD+G HE   +V GL K  + +R+R  +   R Q DW+VS
Sbjct: 37   RKPKPDPSSPFKGRRSGFVDYDKGQHEVSTQVSGLRKSDIPRRHRLAVEGNRFQKDWSVS 96

Query: 205  EVVYEALKVDPQGDIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNY 384
            EVV   L++    D+E +LN W GRF RKNFP LI+E  + GA+ H+ +VFNWMKNQ NY
Sbjct: 97   EVVERVLELKHYEDVEGVLNRWVGRFARKNFPFLIKEITQRGAINHSNQVFNWMKNQKNY 156

Query: 385  RARNDIYNMLIRLHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMN 564
             ARNDIYNM+IRLHAR N  D+ARGLFFEMQKWRCKPD ETYNALI  HG+AGQWRWAMN
Sbjct: 157  CARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALIGAHGRAGQWRWAMN 216

Query: 565  IFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALK 744
            IFDDMLR AV P+RS+YN LINACGS+G+W EAL+VCKQMTENGVGPDLVTHN VLSA K
Sbjct: 217  IFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKQMTENGVGPDLVTHNIVLSAYK 276

Query: 745  NGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKA 924
            NG QY KALSYFELMK   ++PDT T NI+I CLV L QYDKA++ F+SM+    S+C  
Sbjct: 277  NGAQYTKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMRE-KRSECLP 335

Query: 925  DVVTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIF 1104
            D+VTF +I+  Y+  G I++ + VF  MLAEG+KPNIVSYN L++AYA  GM  EAL +F
Sbjct: 336  DIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMTKEALSVF 395

Query: 1105 NLLEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQ 1284
            N ++KNG   D VSYTSLLNAYGR  QP KA+E+F++M   N+K N+V+YS+LI AYGS 
Sbjct: 396  NEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSN 455

Query: 1285 GEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAY 1464
            G   EA  +  EM   GI+PN+V+I  LL AC    +   ID+++  A    ++LN  AY
Sbjct: 456  GLLTEAVEVFCEMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAY 515

Query: 1465 NAAMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCE 1644
            N+A+ ++MN   YE+A++LY+ +K++ + P  VT+ +LI+  C+L  Y EA  F +EM +
Sbjct: 516  NSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMMD 575

Query: 1645 LKVNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQK 1824
            LK+    +VY+++I AY KQGL+ EAE++F  M  SGC P+++TYT M +AY   E W+K
Sbjct: 576  LKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDIITYTAMLHAYNTAEDWEK 635

Query: 1825 AYSLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVIS 2004
            A +LF  ME NNIE D+IA + LM   NKG QP KVLL+A+ M+E+ +TFS+ + FE++ 
Sbjct: 636  ACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREKDITFSDSIFFEMVL 695

Query: 2005 ACSKVRDWKMVDALMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQT 2184
            ACS +RDWK    L++ +EP+   +S  +LNQ+L  +GKSG++E+MMK+++K+  SG + 
Sbjct: 696  ACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGAEA 755

Query: 2185 TRETNEILAANISAAGKFKK 2244
               T  IL  N+ AAG ++K
Sbjct: 756  NFNTYSILLKNLLAAGNWRK 775



 Score =  143 bits (361), Expect = 3e-31
 Identities = 111/497 (22%), Positives = 220/497 (44%), Gaps = 72/497 (14%)
 Frame = +1

Query: 295  FPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEM 474
            F  +I  +   G +++   VFN M  +   +     YN L+  +A   +T +A  +F E+
Sbjct: 340  FTSIIHLYSVNGQIENCKGVFNTMLAE-GLKPNIVSYNALMAAYASHGMTKEALSVFNEI 398

Query: 475  QKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHW 654
            +K    PD+ +Y +L++ +G++ Q   A  +F+ M    + PN  SY+ LI+A GS+G  
Sbjct: 399  KKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLL 458

Query: 655  EEALRVCKQMTENGVGPDLVT-----------------------------------HNTV 729
             EA+ V  +M ++G+ P++V+                                   +N+ 
Sbjct: 459  TEAVEVFCEMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSA 518

Query: 730  LSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGA 909
            + +  N  +Y+KA++ ++ MK++ V PD+ T  ++IS    L +Y +A+     M     
Sbjct: 519  IGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMM---- 574

Query: 910  SDCKADVVT--FNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMC 1083
             D K  +    +++++  Y+  G I +  S+F MM   G  P+I++Y  ++ AY      
Sbjct: 575  -DLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDIITYTAMLHAYNTAEDW 633

Query: 1084 NEALEIFNLLEKNGFRQDTVSYTSLLNAYGRGGQPKKA---------------------- 1197
             +A  +F  +E N    D+++ ++L+ A+ +GGQP K                       
Sbjct: 634  EKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREKDITFSDSIFFEM 693

Query: 1198 ----------KEIFDLMSKLNVKKNVVTY---SSLIYAYGSQGEFEEAKSILDEMICAGI 1338
                      K   DL+ ++    +VV+    + L++  G  G  E    +  +++ +G 
Sbjct: 694  VLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGA 753

Query: 1339 QPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTAFMNGEMYERALS 1518
            + N  T SILL     +   ++   +++    AG+Q +   +   ++        E A  
Sbjct: 754  EANFNTYSILLKNLLAAGNWRKYIEVLQWMEGAGIQPSYGMFRDIVSFAQTRGGAEYAAI 813

Query: 1519 LYEQIKEKHIKPSVVTF 1569
            + E+I+   +K    +F
Sbjct: 814  IQERIESLRMKSGDPSF 830


>ref|XP_006492925.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like
            isoform X2 [Citrus sinensis]
          Length = 846

 Score =  800 bits (2065), Expect = 0.0
 Identities = 397/746 (53%), Positives = 527/746 (70%)
 Frame = +1

Query: 7    MEATPSRGPQPQKKEWELPKKVVRVDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQ 186
            + +   R P+P        ++   VDYD+G HE   +V GL K  + +R+R  +   R Q
Sbjct: 31   IHSNAKRKPKPDPSSPFKGRRSGFVDYDKGQHEVSTQVSGLRKSDIPRRHRLAVEGNRFQ 90

Query: 187  NDWTVSEVVYEALKVDPQGDIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWM 366
             DW+VSEVV   L +    D+E +LN W GRF RKNFP LI+E  + GA+ H+ +VFNWM
Sbjct: 91   KDWSVSEVVERVLALKYYEDVEGVLNRWVGRFARKNFPFLIKEITQRGAINHSNQVFNWM 150

Query: 367  KNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQ 546
            KNQ NY ARNDIYNM+IRLHAR N  D+ARGLFFEMQKWRCKPD ETYNALI  HG+AGQ
Sbjct: 151  KNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQ 210

Query: 547  WRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNT 726
            WRWAMNIFDDMLR AV P+RS+YN LINACGS+G+W EAL+VCK+MTENGVGPDLVTHN 
Sbjct: 211  WRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNI 270

Query: 727  VLSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIG 906
            VLSA KNG QY KALSYFELMK   ++PDT T NI+I CLV L QYDKA++ F+SM+   
Sbjct: 271  VLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMRE-K 329

Query: 907  ASDCKADVVTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCN 1086
             S+C  D+VTF +I+  Y+  G I++ + VF  MLAEG+KPNIVSYN L++AYA  GM  
Sbjct: 330  RSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSK 389

Query: 1087 EALEIFNLLEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLI 1266
            EAL +FN ++KNG   D VSYTSLLNAYGR  QP KA+E+F++M   N+K N+V+YS+LI
Sbjct: 390  EALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALI 449

Query: 1267 YAYGSQGEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQ 1446
             AYGS G   EA  +  EM   GI+PN+V+I  LL AC    +   ID+++  A    ++
Sbjct: 450  DAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIK 509

Query: 1447 LNVNAYNAAMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFF 1626
            LN  AYN+A+ ++MN   YE+A++LY+ +K++ + P  VT+ +LI+  C+L  Y EA  F
Sbjct: 510  LNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGF 569

Query: 1627 FNEMCELKVNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGK 1806
             +EM +LK+    +VY+++I AY KQGL+ EAE++F  M  SGC P+V+TYT M +AY  
Sbjct: 570  LDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNT 629

Query: 1807 KEMWQKAYSLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPV 1986
             E W+KA +LF  ME NNIE D+IA + LM   NKG QP KVLL+A+ M+E+ +TFS+ +
Sbjct: 630  AEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSI 689

Query: 1987 LFEVISACSKVRDWKMVDALMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKME 2166
             FE++ ACS +RDWK    L++ +EP+   +S  +LNQ+L  +GKSG++E+MMK+++K+ 
Sbjct: 690  FFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIV 749

Query: 2167 QSGLQTTRETNEILAANISAAGKFKK 2244
             SG +    T  IL  N+ AAG ++K
Sbjct: 750  SSGAEANFNTYSILLKNLLAAGNWRK 775



 Score =  144 bits (362), Expect = 2e-31
 Identities = 109/497 (21%), Positives = 222/497 (44%), Gaps = 72/497 (14%)
 Frame = +1

Query: 295  FPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEM 474
            F  +I  +   G +++   VFN M  +   +     YN L+  +A   ++ +A  +F E+
Sbjct: 340  FTSIIHLYSVNGQIENCKGVFNTMLAE-GLKPNIVSYNALMAAYASHGMSKEALSVFNEI 398

Query: 475  QKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHW 654
            +K    PD+ +Y +L++ +G++ Q   A  +F+ M    + PN  SY+ LI+A GS+G  
Sbjct: 399  KKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALIDAYGSNGLL 458

Query: 655  EEALRVCKQMTENGVGPDLVT-----------------------------------HNTV 729
             EA+ V ++M ++G+ P++V+                                   +N+ 
Sbjct: 459  AEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIKLNTVAYNSA 518

Query: 730  LSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGA 909
            + +  N  +Y+KA++ ++ MK++ V PD+ T  ++IS    L +Y +A+     M     
Sbjct: 519  IGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGFLDEMM---- 574

Query: 910  SDCKADVVT--FNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMC 1083
             D K  +    +++++  Y+  G I +  S+F MM   G  P++++Y  ++ AY      
Sbjct: 575  -DLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNTAEDW 633

Query: 1084 NEALEIFNLLEKNGFRQDTVSYTSLLNAYGRGGQPKKA---------------------- 1197
             +A  +F  +E N    D+++ ++L+ A+ +GGQP K                       
Sbjct: 634  EKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSIFFEM 693

Query: 1198 ----------KEIFDLMSKLNVKKNVVTY---SSLIYAYGSQGEFEEAKSILDEMICAGI 1338
                      K   DL+ ++    +VV+    + L++  G  G  E    +  +++ +G 
Sbjct: 694  VLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIVSSGA 753

Query: 1339 QPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTAFMNGEMYERALS 1518
            + N  T SILL     +   ++   +++   +AG+Q +   +   ++        E A  
Sbjct: 754  EANFNTYSILLKNLLAAGNWRKYMEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAI 813

Query: 1519 LYEQIKEKHIKPSVVTF 1569
            + E+I+   +K    +F
Sbjct: 814  IQERIESLRMKSGDPSF 830


>ref|XP_006492924.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like
            isoform X1 [Citrus sinensis]
          Length = 859

 Score =  800 bits (2065), Expect = 0.0
 Identities = 397/746 (53%), Positives = 527/746 (70%)
 Frame = +1

Query: 7    MEATPSRGPQPQKKEWELPKKVVRVDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQ 186
            + +   R P+P        ++   VDYD+G HE   +V GL K  + +R+R  +   R Q
Sbjct: 31   IHSNAKRKPKPDPSSPFKGRRSGFVDYDKGQHEVSTQVSGLRKSDIPRRHRLAVEGNRFQ 90

Query: 187  NDWTVSEVVYEALKVDPQGDIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWM 366
             DW+VSEVV   L +    D+E +LN W GRF RKNFP LI+E  + GA+ H+ +VFNWM
Sbjct: 91   KDWSVSEVVERVLALKYYEDVEGVLNRWVGRFARKNFPFLIKEITQRGAINHSNQVFNWM 150

Query: 367  KNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQ 546
            KNQ NY ARNDIYNM+IRLHAR N  D+ARGLFFEMQKWRCKPD ETYNALI  HG+AGQ
Sbjct: 151  KNQKNYCARNDIYNMMIRLHARHNQIDKARGLFFEMQKWRCKPDAETYNALISAHGRAGQ 210

Query: 547  WRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNT 726
            WRWAMNIFDDMLR AV P+RS+YN LINACGS+G+W EAL+VCK+MTENGVGPDLVTHN 
Sbjct: 211  WRWAMNIFDDMLRAAVAPSRSTYNNLINACGSTGNWREALKVCKKMTENGVGPDLVTHNI 270

Query: 727  VLSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIG 906
            VLSA KNG QY KALSYFELMK   ++PDT T NI+I CLV L QYDKA++ F+SM+   
Sbjct: 271  VLSAYKNGAQYSKALSYFELMKGTNIRPDTTTHNIVIYCLVKLGQYDKAIDLFHSMRE-K 329

Query: 907  ASDCKADVVTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCN 1086
             S+C  D+VTF +I+  Y+  G I++ + VF  MLAEG+KPNIVSYN L++AYA  GM  
Sbjct: 330  RSECLPDIVTFTSIIHLYSVNGQIENCKGVFNTMLAEGLKPNIVSYNALMAAYASHGMSK 389

Query: 1087 EALEIFNLLEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLI 1266
            EAL +FN ++KNG   D VSYTSLLNAYGR  QP KA+E+F++M   N+K N+V+YS+LI
Sbjct: 390  EALSVFNEIKKNGLCPDIVSYTSLLNAYGRSQQPVKAREVFNMMRINNLKPNLVSYSALI 449

Query: 1267 YAYGSQGEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQ 1446
             AYGS G   EA  +  EM   GI+PN+V+I  LL AC    +   ID+++  A    ++
Sbjct: 450  DAYGSNGLLAEAVEVFREMEQDGIEPNIVSICTLLAACGRCGRKVNIDAVLLAAEMRDIK 509

Query: 1447 LNVNAYNAAMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFF 1626
            LN  AYN+A+ ++MN   YE+A++LY+ +K++ + P  VT+ +LI+  C+L  Y EA  F
Sbjct: 510  LNTVAYNSAIGSYMNVGEYEKAIALYKCMKKRKVMPDSVTYTVLISSCCRLSRYSEALGF 569

Query: 1627 FNEMCELKVNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGK 1806
             +EM +LK+    +VY+++I AY KQGL+ EAE++F  M  SGC P+V+TYT M +AY  
Sbjct: 570  LDEMMDLKIPLTNQVYSSVISAYSKQGLIAEAESMFNMMKMSGCSPDVITYTAMLHAYNT 629

Query: 1807 KEMWQKAYSLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPV 1986
             E W+KA +LF  ME NNIE D+IA + LM   NKG QP KVLL+A+ M+E+ +TFS+ +
Sbjct: 630  AEDWEKACALFLEMETNNIEPDSIACSALMRAFNKGGQPSKVLLVAEFMREQDITFSDSI 689

Query: 1987 LFEVISACSKVRDWKMVDALMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKME 2166
             FE++ ACS +RDWK    L++ +EP+   +S  +LNQ+L  +GKSG++E+MMK+++K+ 
Sbjct: 690  FFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGLLNQLLHLLGKSGRIESMMKLFFKIV 749

Query: 2167 QSGLQTTRETNEILAANISAAGKFKK 2244
             SG +    T  IL  N+ AAG ++K
Sbjct: 750  SSGAEANFNTYSILLKNLLAAGNWRK 775


>gb|ESW34180.1| hypothetical protein PHAVU_001G131500g [Phaseolus vulgaris]
          Length = 829

 Score =  796 bits (2056), Expect = 0.0
 Identities = 395/722 (54%), Positives = 519/722 (71%)
 Frame = +1

Query: 79   VDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEVVYEALKVDPQGDIESL 258
            VDYD G HE   ++ GL KD ++  YR R+   R Q DWTVSEV    L +D   DI+ L
Sbjct: 43   VDYDLGLHEVSTKISGLRKDNIATHYRLRVAGNRFQKDWTVSEVADLVLSLDLSDDIDGL 102

Query: 259  LNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNMLIRLHARFN 438
            LN W GRF RKNFP LI+E  + G++ H  RVF WMK Q NY ARNDIYNM+IRLHAR N
Sbjct: 103  LNRWIGRFARKNFPYLIKELTQRGSIGHCNRVFRWMKYQRNYCARNDIYNMMIRLHARHN 162

Query: 439  ITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAVPPNRSSYN 618
             TD ARGLFFEMQ+WRCKPDVETYNALI+ HG+AGQWRWA+NI DDMLR A+PP+R +YN
Sbjct: 163  RTDHARGLFFEMQEWRCKPDVETYNALINAHGRAGQWRWALNIMDDMLRAAIPPSRYTYN 222

Query: 619  CLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNGTQYKKALSYFELMKEK 798
             LINACGSSG+W+EAL VCK+MTE+GVGPDLVTHN +LSA K+G QY KALSYFELMK  
Sbjct: 223  NLINACGSSGNWKEALNVCKKMTEHGVGPDLVTHNIILSAFKSGAQYLKALSYFELMKGT 282

Query: 799  GVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADVVTFNTIMKGYAAIGAI 978
             ++PDT TLNIII CLV LQQYDKA++ F SM+    S+C  DVVTF +I+  Y+  G +
Sbjct: 283  HIRPDTTTLNIIIHCLVKLQQYDKAIDIFNSMRE-KKSECTPDVVTFTSIIHLYSVCGQV 341

Query: 979  KDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKNGFRQDTVSYTSL 1158
             +  + F MMLAEG+KPNIVSYN LI AYA  GM NEAL +FN ++ NGFR D VSYTSL
Sbjct: 342  DNCEAAFNMMLAEGLKPNIVSYNALIGAYAACGMDNEALLVFNEIKGNGFRPDVVSYTSL 401

Query: 1159 LNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGEFEEAKSILDEMICAGI 1338
            LNAYGR  +P+KA+EIFD+M    +K N+V+Y+SLI AYGS G   +A  +L EM   GI
Sbjct: 402  LNAYGRSQKPQKAREIFDMMKTNKLKPNLVSYNSLIDAYGSSGFLTDAIEVLREMEQDGI 461

Query: 1339 QPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTAFMNGEMYERALS 1518
            QPNVV+I  LL AC   S+  +ID+++  A   G++LN  AYN+A+ ++MN   Y++A++
Sbjct: 462  QPNVVSICTLLAACGRCSRKVKIDTVLTAAKMRGIKLNTVAYNSAIGSYMNVGEYDKAIN 521

Query: 1519 LYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELKVNANVEVYTALIDAYV 1698
            LY+ +++K IK + VT+ +LI+G CK+  Y EA  F  EM  LK+    E+Y+++I AY 
Sbjct: 522  LYKSMRKKKIKTNSVTYTVLISGCCKMSKYGEALSFMKEMMHLKLPLTKELYSSVICAYS 581

Query: 1699 KQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAYSLFQAMEDNNIEADNI 1878
            KQG + EAE+ F  M +SGCYP+VVTYT+M +AY     W+KAY+LF+ ME ++I+ D I
Sbjct: 582  KQGQIEEAESTFNLMKSSGCYPDVVTYTSMLDAYSAAGNWEKAYALFEEMEASDIKLDTI 641

Query: 1879 AYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISACSKVRDWKMVDALMEDL 2058
            A A LM   NKG QP +VL LA+ M+E+ + F++ + FE++SACS ++DW+    L++ +
Sbjct: 642  ACAALMRSFNKGGQPGRVLNLAESMREKEIPFTDTIFFEMVSACSILQDWRTAVDLIKYI 701

Query: 2059 EPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTRETNEILAANISAAGKF 2238
            E +L  +S   LNQ L  +GKSGK+E M+K+++K+  SG+     T  IL  N+ ++G +
Sbjct: 702  ESSLPVISSGCLNQFLHSLGKSGKIETMLKLFFKILASGIDVNLNTYSILLKNLLSSGNW 761

Query: 2239 KK 2244
            +K
Sbjct: 762  RK 763


>ref|XP_006850541.1| hypothetical protein AMTR_s00159p00058480 [Amborella trichopoda]
            gi|548854192|gb|ERN12122.1| hypothetical protein
            AMTR_s00159p00058480 [Amborella trichopoda]
          Length = 840

 Score =  795 bits (2052), Expect = 0.0
 Identities = 400/750 (53%), Positives = 533/750 (71%), Gaps = 3/750 (0%)
 Frame = +1

Query: 4    SMEATPSRGPQPQKKEWELPKKVVRV---DYDEGFHERKEEVKGLGKDQVSKRYRKRLNS 174
            S  +T S   + Q++E   P K +RV   +YD G HE + ++ GL  +   KRY  R+  
Sbjct: 41   SCSSTRSPPHEFQEEEVAEPWKKIRVGSVNYDTGSHELRTQISGLRLEDAPKRYYCRMAG 100

Query: 175  KRDQNDWTVSEVVYEALKVDPQGDIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRV 354
            +R + DW++S+VV   L V+   DI+ +LNHW+GRF RKN+P+LIRE    G+L+H+IRV
Sbjct: 101  RRRERDWSISDVVENVLSVNHWEDIDGVLNHWSGRFCRKNYPVLIREITNAGSLEHSIRV 160

Query: 355  FNWMKNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHG 534
            F WMKNQ  Y AR DIYNM+IRLHAR +  DQARGLFFEMQ+WRCKPDVETYNALI+VHG
Sbjct: 161  FQWMKNQKTYCARKDIYNMMIRLHARHDRVDQARGLFFEMQEWRCKPDVETYNALINVHG 220

Query: 535  KAGQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLV 714
            +AGQWRWAMNI DDMLR A+PP+RS+YN LINACGSSG W+EAL+VCK MT+NGVGPDLV
Sbjct: 221  RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGQWKEALKVCKSMTDNGVGPDLV 280

Query: 715  THNTVLSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSM 894
            THN +LSALKNG +Y KALSYFELMK   ++PDT TLNI+I CLV L QY  A  TF SM
Sbjct: 281  THNIILSALKNGHEYSKALSYFELMKGTNIRPDTVTLNIVIHCLVKLGQYKSAFNTFNSM 340

Query: 895  KRIGASDCKADVVTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYL 1074
             R   S+C+ D+VTF +I+  Y+A G I   R+ ++ M+AEG+KPNIV+YN L+ AYA  
Sbjct: 341  -RDRKSECQPDIVTFTSIIHAYSACGEISSCRATYDTMIAEGMKPNIVAYNALMGAYASC 399

Query: 1075 GMCNEALEIFNLLEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTY 1254
            GM  +AL +FNL+++ GFR D V+YTSL+NAYGR GQP +A+ IFD + + ++K NVV+Y
Sbjct: 400  GMHEDALSVFNLIKEAGFRPDIVTYTSLINAYGRSGQPVRARSIFDKIKRNSLKPNVVSY 459

Query: 1255 SSLIYAYGSQGEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANN 1434
            ++LI AY S+G   EA  +L EM   G++ N VTIS LL AC    +  +ID I+  A++
Sbjct: 460  NALIDAYSSKGLLTEAFEVLHEMDKDGVRLNTVTISALLAACGRCGRTIEIDPILMAASS 519

Query: 1435 AGVQLNVNAYNAAMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVE 1614
             G+ LN NAYNAA+ +F++G  YE+ALSL+E +KEK  KP  VTF ILI+G+CK+  Y +
Sbjct: 520  EGIVLNTNAYNAAIGSFVDGGEYEKALSLFESMKEKRAKPDSVTFNILISGSCKMGKYDK 579

Query: 1615 AQFFFNEMCELKVNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFN 1794
            A  FF  M  L++  + EVY+++I AY KQG + EAE++F +M  +GC P+VVTYTTM +
Sbjct: 580  AIKFFGTMMALRIPLSKEVYSSVIYAYSKQGQLEEAESLFSEMKKTGCLPDVVTYTTMIH 639

Query: 1795 AYGKKEMWQKAYSLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTF 1974
            AY  +EMW KA SL++ ME N I+ D IA   LM  LN+G +P  VL LA  M+E+ + F
Sbjct: 640  AYTAEEMWTKACSLYEEMEVNGIQPDTIACLALMKALNRGGRPSMVLHLADVMREKGIPF 699

Query: 1975 SEPVLFEVISACSKVRDWKMVDALMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIY 2154
            +E   F +ISA S ++DW  +  L +D+E  L K+S  +LN +L+ +GKSGKVE M+K++
Sbjct: 700  NESAFFNMISAGSMLQDWTSLVKLTKDIESLLPKVSTGLLNHLLRSLGKSGKVEGMIKLF 759

Query: 2155 YKMEQSGLQTTRETNEILAANISAAGKFKK 2244
            YK  +S +     T  IL   +  AGK++K
Sbjct: 760  YKFVESSMDLPFGTYSILLKGLLGAGKWRK 789



 Score =  117 bits (292), Expect = 3e-23
 Identities = 102/418 (24%), Positives = 173/418 (41%), Gaps = 102/418 (24%)
 Frame = +1

Query: 403  YNMLIRLHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDML 582
            YN L+  +A   + + A  +F  +++   +PD+ TY +LI+ +G++GQ   A +IFD + 
Sbjct: 389  YNALMGAYASCGMHEDALSVFNLIKEAGFRPDIVTYTSLINAYGRSGQPVRARSIFDKIK 448

Query: 583  RMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVT--------------- 717
            R ++ PN  SYN LI+A  S G   EA  V  +M ++GV  + VT               
Sbjct: 449  RNSLKPNVVSYNALIDAYSSKGLLTEAFEVLHEMDKDGVRLNTVTISALLAACGRCGRTI 508

Query: 718  --------------------HNTVLSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIII 837
                                +N  + +  +G +Y+KALS FE MKEK  KPD+ T NI+I
Sbjct: 509  EIDPILMAASSEGIVLNTNAYNAAIGSFVDGGEYEKALSLFESMKEKRAKPDSVTFNILI 568

Query: 838  SCLVSLQQYDKAVETFYSM--------------------------------KRIGASDCK 921
            S    + +YDKA++ F +M                                  +  + C 
Sbjct: 569  SGSCKMGKYDKAIKFFGTMMALRIPLSKEVYSSVIYAYSKQGQLEEAESLFSEMKKTGCL 628

Query: 922  ADVVTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEI 1101
             DVVT+ T++  Y A        S++E M   GI+P+ ++   L+ A    G  +  L +
Sbjct: 629  PDVVTYTTMIHAYTAEEMWTKACSLYEEMEVNGIQPDTIACLALMKALNRGGRPSMVLHL 688

Query: 1102 ----------------FNLLEKNGFRQDTVSYTSL-------------------LNAYGR 1176
                            FN++      QD  S   L                   L + G+
Sbjct: 689  ADVMREKGIPFNESAFFNMISAGSMLQDWTSLVKLTKDIESLLPKVSTGLLNHLLRSLGK 748

Query: 1177 GGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGEFEEAKSILDEMICAGIQPNV 1350
             G+ +   ++F    + ++     TYS L+      G++ +   +L  M  + +QP++
Sbjct: 749  SGKVEGMIKLFYKFVESSMDLPFGTYSILLKGLLGAGKWRKYLEVLQWMEDSNLQPSL 806


>ref|XP_006350181.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like
            [Solanum tuberosum]
          Length = 834

 Score =  794 bits (2050), Expect = 0.0
 Identities = 399/727 (54%), Positives = 516/727 (70%)
 Frame = +1

Query: 64   KKVVRVDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEVVYEALKVDPQG 243
            KK   VDYD+G H+    + G  K  + K  R R+   R Q DW VSEVV + +K++   
Sbjct: 48   KKKASVDYDKGIHKVTVRIDGFRKSDLPKHQRLRVEGDRFQKDWGVSEVVEKIMKINHWD 107

Query: 244  DIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNMLIRL 423
            DIE +LN WAGRF RKNFP+LI+E  + G+++H+I VFNWMKNQ NY AR+DIYNM+IRL
Sbjct: 108  DIEGVLNCWAGRFARKNFPILIKEITQTGSIEHSIHVFNWMKNQKNYCARSDIYNMMIRL 167

Query: 424  HARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAVPPN 603
            HAR N  DQARGLFFEMQKWRC+P+VETYNALI  HGKAGQWRWA NI +DMLR ++PPN
Sbjct: 168  HARHNQVDQARGLFFEMQKWRCQPNVETYNALISAHGKAGQWRWAKNIMEDMLRASIPPN 227

Query: 604  RSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNGTQYKKALSYFE 783
            RS+YN LINACGSSG+W EAL+VCK+MTENGVGPDLVTHN VLSA KNG+QY KALSYFE
Sbjct: 228  RSTYNNLINACGSSGNWREALKVCKEMTENGVGPDLVTHNIVLSAYKNGSQYAKALSYFE 287

Query: 784  LMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADVVTFNTIMKGYA 963
            LMK   V+PDT TLNI+I CLV L+QY KAVE F SM+    S+C  D+VTF TIM  Y+
Sbjct: 288  LMKGTKVRPDTTTLNIVIHCLVKLEQYQKAVEIFNSMRE-KRSECIPDIVTFTTIMHMYS 346

Query: 964  AIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKNGFRQDTV 1143
              G IK+  +VF  MLAEG+KPNIVSYNTL+ AYA  GM  EAL IF+ ++ NG R D V
Sbjct: 347  VSGQIKNCEAVFNTMLAEGLKPNIVSYNTLVGAYASRGMAQEALSIFDKMKSNGTRPDVV 406

Query: 1144 SYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGEFEEAKSILDEM 1323
            SYTSLLNAYGR  QP++A E F+ M + N+K N+V+Y+ LI AYGS G  ++A  +L EM
Sbjct: 407  SYTSLLNAYGRSEQPERAMETFEQMKRNNLKPNLVSYNVLIDAYGSNGLLDKAVQVLREM 466

Query: 1324 ICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTAFMNGEMY 1503
               G+QPNVVTIS LL A     Q   IDSI+  A   G++LN  AYN+A+ +++N   Y
Sbjct: 467  EHDGLQPNVVTISTLLAASGRCCQKVNIDSILTAAKMRGIELNTVAYNSALGSYLNAGEY 526

Query: 1504 ERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELKVNANVEVYTAL 1683
            E+ALSLY+ +++K + P  VT+ +LI+G C++  Y EA  F +EM  LK+    EV ++ 
Sbjct: 527  EKALSLYKLMRKKKVMPDSVTYNVLISGCCRMSNYSEALEFLDEMIALKIPLTKEVCSSA 586

Query: 1684 IDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAYSLFQAMEDNNI 1863
            I AY KQG + ++E++F  M   G  P+V+ YTTM NAY   E W+KA+++FQ ME N +
Sbjct: 587  ICAYTKQGQLAKSESMFSMMKMEGFQPDVIAYTTMLNAYSVGENWEKAFAVFQEMELNGV 646

Query: 1864 EADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISACSKVRDWKMVDA 2043
              D IA + LM   N+G QP+KVLL+A  M+ER++ F+E VLFE++SA S +RDW+M+  
Sbjct: 647  LPDAIACSALMRSFNRGCQPDKVLLVADFMRERNIPFTEAVLFELVSASSILRDWRMITE 706

Query: 2044 LMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTRETNEILAANIS 2223
            +   +E +L  +S   LNQ+L  IGKSGK E M+K +YK+  SG +    T  +L  N+ 
Sbjct: 707  ITTTMEASLPYVSVGTLNQLLHSIGKSGKTETMIKFFYKVVTSGTEVNLTTYSVLLKNLL 766

Query: 2224 AAGKFKK 2244
            A+G ++K
Sbjct: 767  ASGNWRK 773



 Score =  165 bits (417), Expect = 9e-38
 Identities = 110/456 (24%), Positives = 216/456 (47%), Gaps = 35/456 (7%)
 Frame = +1

Query: 295  FPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEM 474
            F  ++  +   G +K+   VFN M  +   +     YN L+  +A   +  +A  +F +M
Sbjct: 338  FTTIMHMYSVSGQIKNCEAVFNTMLAE-GLKPNIVSYNTLVGAYASRGMAQEALSIFDKM 396

Query: 475  QKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHW 654
            +    +PDV +Y +L++ +G++ Q   AM  F+ M R  + PN  SYN LI+A GS+G  
Sbjct: 397  KSNGTRPDVVSYTSLLNAYGRSEQPERAMETFEQMKRNNLKPNLVSYNVLIDAYGSNGLL 456

Query: 655  EEALRVCKQMTENGVGPDLVT-----------------------------------HNTV 729
            ++A++V ++M  +G+ P++VT                                   +N+ 
Sbjct: 457  DKAVQVLREMEHDGLQPNVVTISTLLAASGRCCQKVNIDSILTAAKMRGIELNTVAYNSA 516

Query: 730  LSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGA 909
            L +  N  +Y+KALS ++LM++K V PD+ T N++IS    +  Y +A+E    M  +  
Sbjct: 517  LGSYLNAGEYEKALSLYKLMRKKKVMPDSVTYNVLISGCCRMSNYSEALEFLDEMIALKI 576

Query: 910  SDCKADVVTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNE 1089
               K      ++ +  Y   G +    S+F MM  EG +P++++Y T+++AY+      +
Sbjct: 577  PLTKE---VCSSAICAYTKQGQLAKSESMFSMMKMEGFQPDVIAYTTMLNAYSVGENWEK 633

Query: 1090 ALEIFNLLEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIY 1269
            A  +F  +E NG   D ++ ++L+ ++ RG QP K   + D M + N+         L+ 
Sbjct: 634  AFAVFQEMELNGVLPDAIACSALMRSFNRGCQPDKVLLVADFMRERNIPFTEAVLFELVS 693

Query: 1270 AYGSQGEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQL 1449
            A     ++     I   M  +    +V T++ LL +   S + + +         +G ++
Sbjct: 694  ASSILRDWRMITEITTTMEASLPYVSVGTLNQLLHSIGKSGKTETMIKFFYKVVTSGTEV 753

Query: 1450 NVNAYNAAMTAFMNGEMYERALSLYEQIKEKHIKPS 1557
            N+  Y+  +   +    + + + + E +++  ++PS
Sbjct: 754  NLTTYSVLLKNLLASGNWRKYIEVLEWMEDGRLQPS 789


>ref|XP_004236606.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like
            [Solanum lycopersicum]
          Length = 834

 Score =  791 bits (2042), Expect = 0.0
 Identities = 400/738 (54%), Positives = 519/738 (70%)
 Frame = +1

Query: 31   PQPQKKEWELPKKVVRVDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEV 210
            P+   K     KK   VDYD+G H+    + G  K  + K  R R+   R Q DW VSEV
Sbjct: 37   PKNDNKAAYEEKKKASVDYDKGIHKVTVRIDGFRKSDLPKHQRLRVEGDRFQKDWGVSEV 96

Query: 211  VYEALKVDPQGDIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRA 390
            V + +K++   DIE +LN WAGRF RKNFP+LI+E  + G ++H+I VFNWMKNQ NY A
Sbjct: 97   VEKIMKINHWDDIEGVLNCWAGRFARKNFPILIKEITETGLIEHSIHVFNWMKNQKNYCA 156

Query: 391  RNDIYNMLIRLHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIF 570
            R+DIYNM+IRLHAR N  DQARGLFFEMQKWRC+P+VETYNALI  HG+A QWRWA NI 
Sbjct: 157  RSDIYNMMIRLHARHNRVDQARGLFFEMQKWRCQPNVETYNALISAHGRASQWRWAKNIM 216

Query: 571  DDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNG 750
            +DMLR ++PPNRS+YN LINACGSSG+W EAL+VCK+MTENGVGPDL+THN VLSA KNG
Sbjct: 217  EDMLRASIPPNRSTYNNLINACGSSGNWREALKVCKEMTENGVGPDLMTHNIVLSAYKNG 276

Query: 751  TQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADV 930
            TQY KALSYFELMK   V+PDT TLNI+I CLV L+QY KAVE F SM+    S+C  DV
Sbjct: 277  TQYAKALSYFELMKGTKVRPDTTTLNIVIHCLVKLEQYQKAVEIFNSMRE-KRSECIPDV 335

Query: 931  VTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNL 1110
            VT+ TIM  Y+  G IK+  +VF  MLAEG+KPNIVSYNTL+ AYA  GM  EAL IF+ 
Sbjct: 336  VTYTTIMHMYSVSGQIKNCEAVFNTMLAEGLKPNIVSYNTLVGAYASHGMAQEALSIFDK 395

Query: 1111 LEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGE 1290
            ++ NG R D VSYTSLLNAYGR  QP++A E F+ M + N+K N+V+Y+ LI AYGS G 
Sbjct: 396  MKSNGTRPDVVSYTSLLNAYGRSEQPERAMETFERMKRNNLKPNLVSYNVLIDAYGSNGL 455

Query: 1291 FEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNA 1470
             ++A  +L EM   G+QPNVVTIS LL A S   Q   IDSI+  A   G++LN  AYN+
Sbjct: 456  LDKAVQVLREMEHDGLQPNVVTISTLLAASSRCCQKVNIDSILTAAKMRGIELNTVAYNS 515

Query: 1471 AMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELK 1650
            A+ +++N   YE+ALSLY+ +++K + P  VT+ +LI+G C++  Y EA  F +EM  LK
Sbjct: 516  ALGSYLNAGEYEKALSLYKLMRKKKVMPDSVTYNVLISGCCRMSNYSEALEFLDEMIALK 575

Query: 1651 VNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAY 1830
            +    EV ++ I AY KQG + ++E++F  M   G  P+V+ YTTM NAY   E W+KA+
Sbjct: 576  IPLTKEVCSSAICAYTKQGQLAKSESMFSMMKMEGFQPDVIAYTTMLNAYSVGENWEKAF 635

Query: 1831 SLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISAC 2010
            ++FQ ME N +  D IA + LM   N+G QP+KVLL+A  M+ER++ F+E VLFE++SA 
Sbjct: 636  AVFQEMELNGVLPDAIACSALMRSFNRGCQPDKVLLVADFMRERNIPFTEAVLFELVSAS 695

Query: 2011 SKVRDWKMVDALMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTR 2190
            S +RDW+M+  ++  +E +L  +S  +LNQ+L  IGKSGK E M+K +Y +  SG +   
Sbjct: 696  SILRDWRMITEIITTMEASLPYVSIGMLNQLLHSIGKSGKTETMIKFFYMVVTSGTEVNL 755

Query: 2191 ETNEILAANISAAGKFKK 2244
             T  +L  N+ AAG ++K
Sbjct: 756  TTYSVLLKNLLAAGNWRK 773



 Score =  164 bits (414), Expect = 2e-37
 Identities = 108/445 (24%), Positives = 214/445 (48%), Gaps = 35/445 (7%)
 Frame = +1

Query: 328  GALKHAIRVFNWMKNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEMQKWRCKPDVET 507
            G +K+   VFN M  +   +     YN L+  +A   +  +A  +F +M+    +PDV +
Sbjct: 349  GQIKNCEAVFNTMLAE-GLKPNIVSYNTLVGAYASHGMAQEALSIFDKMKSNGTRPDVVS 407

Query: 508  YNALIHVHGKAGQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMT 687
            Y +L++ +G++ Q   AM  F+ M R  + PN  SYN LI+A GS+G  ++A++V ++M 
Sbjct: 408  YTSLLNAYGRSEQPERAMETFERMKRNNLKPNLVSYNVLIDAYGSNGLLDKAVQVLREME 467

Query: 688  ENGVGPDLVTHNTVLSALK-----------------------------------NGTQYK 762
             +G+ P++VT +T+L+A                                     N  +Y+
Sbjct: 468  HDGLQPNVVTISTLLAASSRCCQKVNIDSILTAAKMRGIELNTVAYNSALGSYLNAGEYE 527

Query: 763  KALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADVVTFN 942
            KALS ++LM++K V PD+ T N++IS    +  Y +A+E    M  +     K      +
Sbjct: 528  KALSLYKLMRKKKVMPDSVTYNVLISGCCRMSNYSEALEFLDEMIALKIPLTKE---VCS 584

Query: 943  TIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKN 1122
            + +  Y   G +    S+F MM  EG +P++++Y T+++AY+      +A  +F  +E N
Sbjct: 585  SAICAYTKQGQLAKSESMFSMMKMEGFQPDVIAYTTMLNAYSVGENWEKAFAVFQEMELN 644

Query: 1123 GFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGEFEEA 1302
            G   D ++ ++L+ ++ RG QP K   + D M + N+         L+ A     ++   
Sbjct: 645  GVLPDAIACSALMRSFNRGCQPDKVLLVADFMRERNIPFTEAVLFELVSASSILRDWRMI 704

Query: 1303 KSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTA 1482
              I+  M  +    ++  ++ LL +   S + + +     +   +G ++N+  Y+  +  
Sbjct: 705  TEIITTMEASLPYVSIGMLNQLLHSIGKSGKTETMIKFFYMVVTSGTEVNLTTYSVLLKN 764

Query: 1483 FMNGEMYERALSLYEQIKEKHIKPS 1557
             +    + + + + E +++  ++PS
Sbjct: 765  LLAAGNWRKYIEVLEWMEDGRLQPS 789


>gb|EOY09212.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
            [Theobroma cacao]
          Length = 841

 Score =  790 bits (2041), Expect = 0.0
 Identities = 387/722 (53%), Positives = 518/722 (71%)
 Frame = +1

Query: 79   VDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEVVYEALKVDPQGDIESL 258
            VDYD+G HE    V GL K  + KRYR R+   R Q DWTVSEVV +  +++   ++E +
Sbjct: 48   VDYDKGQHEVSTRVSGLRKADIPKRYRLRVEGDRFQKDWTVSEVVDQIQELNHWENVEPV 107

Query: 259  LNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNMLIRLHARFN 438
            LN W GRF RKNFP LI+E  + GA++H+++VF+WMKNQ NY ARNDIYNM+IRLHAR N
Sbjct: 108  LNRWVGRFARKNFPFLIKELTQRGAIEHSVKVFDWMKNQKNYCARNDIYNMMIRLHARHN 167

Query: 439  ITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAVPPNRSSYN 618
             TDQARGLFFEMQKWRCKPD ETYNALIH HG+AGQWRWAMNI +DML  A+PP+RS+YN
Sbjct: 168  RTDQARGLFFEMQKWRCKPDAETYNALIHAHGRAGQWRWAMNIMEDMLSAAIPPSRSTYN 227

Query: 619  CLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNGTQYKKALSYFELMKEK 798
             LINACGSSG+W EAL+VCK+MTENGVGPDLVTHN VLSA KNG QY KALSYFELMK  
Sbjct: 228  NLINACGSSGNWREALKVCKKMTENGVGPDLVTHNIVLSAYKNGAQYSKALSYFELMKGT 287

Query: 799  GVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADVVTFNTIMKGYAAIGAI 978
             ++PDT TLNI+I+CLV L QY KA++ F SM+   A DC  D+VTF +I+  Y+  G +
Sbjct: 288  NIRPDTTTLNIVINCLVKLGQYGKAIDIFNSMREKRA-DCHPDIVTFTSIIHLYSVSGQM 346

Query: 979  KDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKNGFRQDTVSYTSL 1158
            ++ ++VF  MLAEGI+PNIV+YNTL++AYA  GM  EA  +F  ++ NGFR D VS+TSL
Sbjct: 347  ENCKAVFNTMLAEGIRPNIVTYNTLMAAYASHGMSEEAFAVFEQIKHNGFRPDVVSFTSL 406

Query: 1159 LNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGEFEEAKSILDEMICAGI 1338
            LNAYGR  QP KA+E+F +M + N K N+V+Y++LI AYGS G   EA  +L  M   GI
Sbjct: 407  LNAYGRSQQPDKAREVFVIMKRDNCKPNLVSYNALIDAYGSNGLLAEAVEVLRHMEQDGI 466

Query: 1339 QPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTAFMNGEMYERALS 1518
             PN+V+I  LL AC    Q  +ID+++  A   G++LN  AYN+A+ ++MN   +E+A++
Sbjct: 467  HPNIVSICTLLAACGRCGQKVKIDAVLSAAELRGIKLNTVAYNSAIGSYMNFGEFEKAVA 526

Query: 1519 LYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELKVNANVEVYTALIDAYV 1698
            LY+ ++++++ P  VT+ +LI+G CK+  Y EA  F ++M  LK+    EVY++LI  Y 
Sbjct: 527  LYKSMRKRNVMPDSVTYTVLISGYCKMSKYGEALGFLDDMVALKLPLTKEVYSSLICVYS 586

Query: 1699 KQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAYSLFQAMEDNNIEADNI 1878
            KQG V EAE++F  M  + C P+VV YT M +AY   E W+KA +LF  ME N+++ D++
Sbjct: 587  KQGQVAEAESMFNMMKVASCCPDVVAYTAMLHAYNAAENWEKACALFLDMETNDVQPDSV 646

Query: 1879 AYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISACSKVRDWKMVDALMEDL 2058
            A + LM   NKG +P KVL+LA+ M+E+++  ++   FE++SACS +RDWK    L+  +
Sbjct: 647  ACSALMRAFNKGGRPSKVLVLAEYMREKAIPLNDATFFEMVSACSMLRDWKTTMDLINLM 706

Query: 2059 EPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTRETNEILAANISAAGKF 2238
            EP    +S  ++NQ+L  +GKSGK+E+MMK++YKM  SG      T  IL  N+ AAG +
Sbjct: 707  EPLFPLVSIGLMNQLLHLVGKSGKIESMMKLFYKMIASGAAVNFNTYSILLKNLLAAGNW 766

Query: 2239 KK 2244
            +K
Sbjct: 767  RK 768



 Score =  202 bits (515), Expect = 4e-49
 Identities = 152/542 (28%), Positives = 249/542 (45%), Gaps = 2/542 (0%)
 Frame = +1

Query: 343  AIRVFNWMKNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEMQKWR--CKPDVETYNA 516
            A+  F  MK   N R      N++I    +     +A  +F  M++ R  C PD+ T+ +
Sbjct: 277  ALSYFELMKGT-NIRPDTTTLNIVINCLVKLGQYGKAIDIFNSMREKRADCHPDIVTFTS 335

Query: 517  LIHVHGKAGQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENG 696
            +IH++  +GQ      +F+ ML   + PN  +YN L+ A  S G  EEA  V +Q+  NG
Sbjct: 336  IIHLYSVSGQMENCKAVFNTMLAEGIRPNIVTYNTLMAAYASHGMSEEAFAVFEQIKHNG 395

Query: 697  VGPDLVTHNTVLSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAV 876
              PD+V+  ++L+A     Q  KA   F +MK    KP+  + N +I    S     +AV
Sbjct: 396  FRPDVVSFTSLLNAYGRSQQPDKAREVFVIMKRDNCKPNLVSYNALIDAYGSNGLLAEAV 455

Query: 877  ETFYSMKRIGASDCKADVVTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLI 1056
            E    M++ G      ++V+  T++      G    + +V       GIK N V+YN+ I
Sbjct: 456  EVLRHMEQDGIHP---NIVSICTLLAACGRCGQKVKIDAVLSAAELRGIKLNTVAYNSAI 512

Query: 1057 SAYAYLGMCNEALEIFNLLEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVK 1236
             +Y   G   +A+ ++  + K     D+V+YT L++ Y +  +  +A    D M  L + 
Sbjct: 513  GSYMNFGEFEKAVALYKSMRKRNVMPDSVTYTVLISGYCKMSKYGEALGFLDDMVALKLP 572

Query: 1237 KNVVTYSSLIYAYGSQGEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSI 1416
                 YSSLI  Y  QG+  EA+S+ + M  A   P+VV  + +L A + +   ++  ++
Sbjct: 573  LTKEVYSSLICVYSKQGQVAEAESMFNMMKVASCCPDVVAYTAMLHAYNAAENWEKACAL 632

Query: 1417 IELANNAGVQLNVNAYNAAMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGACK 1596
                    VQ +  A +A M AF  G    + L L E ++EK I  +  TF  +++    
Sbjct: 633  FLDMETNDVQPDSVACSALMRAFNKGGRPSKVLVLAEYMREKAIPLNDATFFEMVSACSM 692

Query: 1597 LRGYVEAQFFFNEMCELKVNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNVVT 1776
            LR +       N M  L    ++ +   L+    K G +     +F KM+ASG   N  T
Sbjct: 693  LRDWKTTMDLINLMEPLFPLVSIGLMNQLLHLVGKSGKIESMMKLFYKMIASGAAVNFNT 752

Query: 1777 YTTMFNAYGKKEMWQKAYSLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQKMK 1956
            Y+ +         W+K   + Q MED  I+  N  +  ++S   KG   E     A K++
Sbjct: 753  YSILLKNLLAAGNWRKYIEVLQWMEDAGIQPSNGMFVDIVSFSQKGCGAE----YADKIR 808

Query: 1957 ER 1962
            ER
Sbjct: 809  ER 810


>ref|XP_002308939.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550335476|gb|EEE92462.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 822

 Score =  788 bits (2035), Expect = 0.0
 Identities = 388/728 (53%), Positives = 520/728 (71%), Gaps = 1/728 (0%)
 Frame = +1

Query: 64   KKVVRVDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEVVYEALKVDPQG 243
            KK   VDYD+G H    +V G+ KDQ+ +RYR R+   R Q DW+VS+VV + L++D + 
Sbjct: 38   KKSGFVDYDKGIHHVSTQVSGIRKDQIPQRYRIRVQGDRFQKDWSVSQVVQKVLELDHKS 97

Query: 244  D-IESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNMLIR 420
            D +E LLN W GRF RKNFPLLI+E  + G+++H+I VF WMKNQ NY AR DIYNM+IR
Sbjct: 98   DDVEGLLNRWVGRFARKNFPLLIKEITQKGSIEHSILVFRWMKNQRNYCARTDIYNMMIR 157

Query: 421  LHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAVPP 600
            LHAR N TDQARGLFFEMQKWRCKPD ET NALI+ HG++GQWRWAMNI +DML+ A+PP
Sbjct: 158  LHARHNWTDQARGLFFEMQKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPP 217

Query: 601  NRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNGTQYKKALSYF 780
            +RS+YN LINACGSSG+W EAL++CK+MTENGVGPDLVTHN +LSA K G QY KALSYF
Sbjct: 218  SRSTYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYF 277

Query: 781  ELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADVVTFNTIMKGY 960
            ELMK   ++PDT TLNIII CL  L QY+KA+  F SM+   A +C  DVVTF +I+  Y
Sbjct: 278  ELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRA-ECHPDVVTFTSIIHLY 336

Query: 961  AAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKNGFRQDT 1140
            +  G I++ R+VF  M+AEG+KPNIVSYNTL+ AYA  GM  EAL +FN ++ +G R D 
Sbjct: 337  SVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDV 396

Query: 1141 VSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGEFEEAKSILDE 1320
            VSYTSLLN+YGR  QPKKA+E+F++M +  +K N+V+Y+++I AYGS G   EA  +L E
Sbjct: 397  VSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLRE 456

Query: 1321 MICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTAFMNGEM 1500
            M   GI PN V+I  LL AC   S+   ID +++ A    ++LN  AYN+A+ ++MN   
Sbjct: 457  MEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGE 516

Query: 1501 YERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELKVNANVEVYTA 1680
            +E+A S+Y  +++  + P  VTF +LI+G CK+  Y EA  F +EM +LK+    E Y++
Sbjct: 517  FEKATSMYRSMRKSKVIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSS 576

Query: 1681 LIDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAYSLFQAMEDNN 1860
            +I AY KQG + EAE++F KM  +GC P+VVTYT M +AY   E W+KA +L Q ME+ N
Sbjct: 577  MICAYSKQGKITEAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYN 636

Query: 1861 IEADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISACSKVRDWKMVD 2040
            I+ D IA + LM   NKG  P KVL+LA+ M+E+ +  S+ + FE++SACS +RDW+   
Sbjct: 637  IQPDTIACSALMRAFNKGGDPSKVLILAEFMREKEIPLSDAIFFEMVSACSLLRDWRTTI 696

Query: 2041 ALMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTRETNEILAANI 2220
             L++ +E + + +S  +LNQ+L  +GKSGK+E+MMK++YK+  SG +    T  IL  N+
Sbjct: 697  ELIKLMESSFSVVSIGLLNQLLHLLGKSGKIESMMKLFYKIIGSGAEINCNTYSILLKNL 756

Query: 2221 SAAGKFKK 2244
             A G ++K
Sbjct: 757  LAVGNWRK 764


>gb|EMJ05463.1| hypothetical protein PRUPE_ppa001801mg [Prunus persica]
          Length = 763

 Score =  786 bits (2031), Expect = 0.0
 Identities = 380/727 (52%), Positives = 522/727 (71%)
 Frame = +1

Query: 64   KKVVRVDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEVVYEALKVDPQG 243
            KK V VDYD G H     + GL K  + K +R R+ ++R Q DW VS+VV    K+    
Sbjct: 35   KKQVSVDYDRGTHHISTRIPGLTKQHIPKHHRLRVETERFQKDWAVSDVVDRVYKLRHWD 94

Query: 244  DIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNMLIRL 423
            DIE LLN W GRF RKNFP+LI+E  + G+++H +RVF WMKNQ NY AR DIYNM+IRL
Sbjct: 95   DIEGLLNRWVGRFARKNFPVLIKEMTERGSVEHCVRVFGWMKNQKNYCARTDIYNMMIRL 154

Query: 424  HARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAVPPN 603
            HAR N+ D+ARGLFFEMQ+WRCKPD E++NALI+ HG+AGQWRWAMN+ DDMLR A+PP+
Sbjct: 155  HARHNLVDKARGLFFEMQEWRCKPDAESFNALINAHGRAGQWRWAMNLMDDMLRAAIPPS 214

Query: 604  RSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNGTQYKKALSYFE 783
            RS+YN LINACGSSG+W EAL+VCK+MT+NGVGPDLVTHN VLSA K G QY KALSYFE
Sbjct: 215  RSTYNNLINACGSSGNWREALKVCKKMTDNGVGPDLVTHNIVLSAYKTGAQYSKALSYFE 274

Query: 784  LMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADVVTFNTIMKGYA 963
            LMK   ++PDT TLNI+I CLV L Q++KA++ F SM R   ++C+ D+VTF +I+  Y+
Sbjct: 275  LMKGTNIRPDTTTLNIVIYCLVKLGQHEKAIDLFNSM-RDKRAECRPDIVTFTSIIHLYS 333

Query: 964  AIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKNGFRQDTV 1143
              G I+   +VF  MLAEG+KPNIVSYN L+ AYA  GM  EAL +FN ++K+ FR D V
Sbjct: 334  VCGQIEACAAVFSTMLAEGLKPNIVSYNALLGAYASHGMSEEALSVFNEIKKSSFRPDVV 393

Query: 1144 SYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGEFEEAKSILDEM 1323
            SYTSLLNAYGR   P+KA+E+F +M K N+K N+V+Y++LI AYGS G   EA  +L EM
Sbjct: 394  SYTSLLNAYGRSRHPEKAREVFHMMKKNNLKPNLVSYNALINAYGSNGLLAEAVEVLREM 453

Query: 1324 ICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTAFMNGEMY 1503
               GI PN+V+I  LL AC    Q  +ID+++  A   G++LN  AYN+A+ ++MN   +
Sbjct: 454  ERDGIHPNIVSICTLLSACGQCGQKVKIDAVLSAAKLRGIELNTIAYNSAIGSYMNLGEH 513

Query: 1504 ERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELKVNANVEVYTAL 1683
            E+A++LY+ +++K +KP  VT+ +LI+G CK+  Y EA  F++EM +LK+  + EVY+++
Sbjct: 514  EKAINLYQSMRKKKVKPDSVTYTVLISGCCKMSKYSEAITFYDEMMDLKIPLSNEVYSSV 573

Query: 1684 IDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAYSLFQAMEDNNI 1863
            I AY K+G + EAE+IF  M  +GC P+VV+YT M +AY   E W+KA ++FQ ME   I
Sbjct: 574  ICAYSKKGQIMEAESIFNLMKMAGCPPDVVSYTAMLHAYSAAENWEKACAIFQEMETTGI 633

Query: 1864 EADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISACSKVRDWKMVDA 2043
            + D IA + LM   NKG  P +VL+LA+ M+E+ + F++ + FE++SACS ++DW+    
Sbjct: 634  QPDGIACSALMRAFNKGGDPSRVLILAELMREKEIPFNDAIFFEMVSACSLLQDWRTTMD 693

Query: 2044 LMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTRETNEILAANIS 2223
            L++ +EP+L K+S  ++NQ+L  +G+SGK+E MMK+++K+  S      +T  IL  N+ 
Sbjct: 694  LVKLIEPSLPKVSVGLVNQLLHVLGRSGKIETMMKLFFKIVASSGDINFDTYAILLKNLL 753

Query: 2224 AAGKFKK 2244
            + G ++K
Sbjct: 754  SVGSWRK 760


>ref|XP_004493484.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like
            isoform X2 [Cicer arietinum]
          Length = 830

 Score =  786 bits (2029), Expect = 0.0
 Identities = 395/738 (53%), Positives = 518/738 (70%), Gaps = 3/738 (0%)
 Frame = +1

Query: 40   QKKEWELPKKVVR---VDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEV 210
            +KK  EL  K  +   VDYD G HE    + GL KD +   YR R+   R Q DWTVSEV
Sbjct: 28   KKKTNELAFKETKDGFVDYDRGQHEVSTRITGLRKDDIPAHYRLRVAGNRFQKDWTVSEV 87

Query: 211  VYEALKVDPQGDIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRA 390
                L +  + D+E LLN W GRF RKNFP LIRE  + G+++H   VF+WMKNQ NY A
Sbjct: 88   TDSILSLTLRDDVEGLLNRWIGRFARKNFPFLIRELTQRGSIEHCNLVFSWMKNQKNYCA 147

Query: 391  RNDIYNMLIRLHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIF 570
            R DIYNM+IRL AR N TDQARGLFFEMQKWRCKPD ETY+ALI+ HG+AGQWRWAMNI 
Sbjct: 148  RTDIYNMMIRLQARHNRTDQARGLFFEMQKWRCKPDAETYSALINAHGRAGQWRWAMNIM 207

Query: 571  DDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNG 750
            +DMLR A+PP+RS+YN LINACGSSG+W+EAL VCK+MT+NGVGPDLVTHN +LSA K+G
Sbjct: 208  EDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLSAFKSG 267

Query: 751  TQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADV 930
             QY KALSYFELMK   ++PD  TLNIII CLV L+QYDKA++ F SM+    S+C  DV
Sbjct: 268  HQYSKALSYFELMKGTHIRPDATTLNIIIHCLVKLRQYDKAIDIFNSMRE-KKSECHPDV 326

Query: 931  VTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNL 1110
            VTF +I+  Y+  G I++  + F MMLAEG+KPNIVSYN L+ AYA  GM NEAL++FN 
Sbjct: 327  VTFTSIIHLYSVSGQIENCEAAFSMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNK 386

Query: 1111 LEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGE 1290
            +++NG R D VSYTSLLNAYGR  +P+KA+EIF +M + N+K N+V+Y++LI AYGS G 
Sbjct: 387  IKQNGLRPDIVSYTSLLNAYGRSRKPQKAREIFIMMKRNNLKPNIVSYNALIDAYGSNGL 446

Query: 1291 FEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNA 1470
             E+A  IL EM    I PNVV+I  LL AC    Q  +ID+++  A   G++LN  AYN+
Sbjct: 447  LEDAIEILREMEQDRIHPNVVSICTLLAACGRCYQKVKIDTVLSAAEMRGIKLNTVAYNS 506

Query: 1471 AMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELK 1650
            A+ +++N   Y++A+ LY  +++K+IK   VT+ +LI+G CK+  Y EA  F  EM  LK
Sbjct: 507  AIGSYINVGEYDKAIDLYNSMRKKNIKSDSVTYTVLISGCCKMSKYGEALSFMEEMMHLK 566

Query: 1651 VNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAY 1830
            ++ + EVY+++I AY KQG + EAE+ F  M + GC P+VVTYT M +AY   E W+KAY
Sbjct: 567  LSMSKEVYSSVICAYSKQGQITEAESTFNLMKSCGCNPDVVTYTAMLDAYNAAEKWEKAY 626

Query: 1831 SLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISAC 2010
            +LF+ ME N ++ D IA A +M   NKG QP  VL LAQ M+E+ +  S+ + FE++SAC
Sbjct: 627  ALFEEMEANEVKLDTIACAAVMRAFNKGGQPGMVLSLAQSMREKEIPLSDTIFFEMVSAC 686

Query: 2011 SKVRDWKMVDALMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTR 2190
            S + DWK    +++ +EP+L  +S   LN  L  +GKSGK+E M+K+++KM  SG     
Sbjct: 687  SLLHDWKTAVDVIKYMEPSLPVISSGCLNLFLHSLGKSGKIETMLKLFFKMLASGADVNF 746

Query: 2191 ETNEILAANISAAGKFKK 2244
             T  IL  N+ ++G ++K
Sbjct: 747  NTYSILLKNLLSSGNWRK 764



 Score =  199 bits (505), Expect = 6e-48
 Identities = 144/540 (26%), Positives = 251/540 (46%), Gaps = 2/540 (0%)
 Frame = +1

Query: 343  AIRVFNWMKNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEMQ--KWRCKPDVETYNA 516
            A+  F  MK  H  R      N++I    +    D+A  +F  M+  K  C PDV T+ +
Sbjct: 273  ALSYFELMKGTH-IRPDATTLNIIIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVTFTS 331

Query: 517  LIHVHGKAGQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENG 696
            +IH++  +GQ       F  ML   + PN  SYN L+ A  + G   EAL+V  ++ +NG
Sbjct: 332  IIHLYSVSGQIENCEAAFSMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNKIKQNG 391

Query: 697  VGPDLVTHNTVLSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAV 876
            + PD+V++ ++L+A     + +KA   F +MK   +KP+  + N +I    S    + A+
Sbjct: 392  LRPDIVSYTSLLNAYGRSRKPQKAREIFIMMKRNNLKPNIVSYNALIDAYGSNGLLEDAI 451

Query: 877  ETFYSMKRIGASDCKADVVTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLI 1056
            E    M++        +VV+  T++           + +V       GIK N V+YN+ I
Sbjct: 452  EILREMEQ---DRIHPNVVSICTLLAACGRCYQKVKIDTVLSAAEMRGIKLNTVAYNSAI 508

Query: 1057 SAYAYLGMCNEALEIFNLLEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVK 1236
             +Y  +G  ++A++++N + K   + D+V+YT L++   +  +  +A    + M  L + 
Sbjct: 509  GSYINVGEYDKAIDLYNSMRKKNIKSDSVTYTVLISGCCKMSKYGEALSFMEEMMHLKLS 568

Query: 1237 KNVVTYSSLIYAYGSQGEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSI 1416
             +   YSS+I AY  QG+  EA+S  + M   G  P+VVT + +LDA + + + ++  ++
Sbjct: 569  MSKEVYSSVICAYSKQGQITEAESTFNLMKSCGCNPDVVTYTAMLDAYNAAEKWEKAYAL 628

Query: 1417 IELANNAGVQLNVNAYNAAMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGACK 1596
             E      V+L+  A  A M AF  G      LSL + ++EK I  S   F  +++    
Sbjct: 629  FEEMEANEVKLDTIACAAVMRAFNKGGQPGMVLSLAQSMREKEIPLSDTIFFEMVSACSL 688

Query: 1597 LRGYVEAQFFFNEMCELKVNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNVVT 1776
            L  +  A      M       +       + +  K G +     +F KM+ASG   N  T
Sbjct: 689  LHDWKTAVDVIKYMEPSLPVISSGCLNLFLHSLGKSGKIETMLKLFFKMLASGADVNFNT 748

Query: 1777 YTTMFNAYGKKEMWQKAYSLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQKMK 1956
            Y+ +         W+K   + Q M+D  I   N  Y  + S   K    E   ++ ++++
Sbjct: 749  YSILLKNLLSSGNWRKYLEVLQWMKDAGINPSNEMYRDISSFSQKCCGAENAAVIKERLE 808


>ref|XP_004493483.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like
            isoform X1 [Cicer arietinum]
          Length = 834

 Score =  786 bits (2029), Expect = 0.0
 Identities = 395/738 (53%), Positives = 518/738 (70%), Gaps = 3/738 (0%)
 Frame = +1

Query: 40   QKKEWELPKKVVR---VDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEV 210
            +KK  EL  K  +   VDYD G HE    + GL KD +   YR R+   R Q DWTVSEV
Sbjct: 28   KKKTNELAFKETKDGFVDYDRGQHEVSTRITGLRKDDIPAHYRLRVAGNRFQKDWTVSEV 87

Query: 211  VYEALKVDPQGDIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRA 390
                L +  + D+E LLN W GRF RKNFP LIRE  + G+++H   VF+WMKNQ NY A
Sbjct: 88   TDSILSLTLRDDVEGLLNRWIGRFARKNFPFLIRELTQRGSIEHCNLVFSWMKNQKNYCA 147

Query: 391  RNDIYNMLIRLHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIF 570
            R DIYNM+IRL AR N TDQARGLFFEMQKWRCKPD ETY+ALI+ HG+AGQWRWAMNI 
Sbjct: 148  RTDIYNMMIRLQARHNRTDQARGLFFEMQKWRCKPDAETYSALINAHGRAGQWRWAMNIM 207

Query: 571  DDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNG 750
            +DMLR A+PP+RS+YN LINACGSSG+W+EAL VCK+MT+NGVGPDLVTHN +LSA K+G
Sbjct: 208  EDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLSAFKSG 267

Query: 751  TQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADV 930
             QY KALSYFELMK   ++PD  TLNIII CLV L+QYDKA++ F SM+    S+C  DV
Sbjct: 268  HQYSKALSYFELMKGTHIRPDATTLNIIIHCLVKLRQYDKAIDIFNSMRE-KKSECHPDV 326

Query: 931  VTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNL 1110
            VTF +I+  Y+  G I++  + F MMLAEG+KPNIVSYN L+ AYA  GM NEAL++FN 
Sbjct: 327  VTFTSIIHLYSVSGQIENCEAAFSMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNK 386

Query: 1111 LEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGE 1290
            +++NG R D VSYTSLLNAYGR  +P+KA+EIF +M + N+K N+V+Y++LI AYGS G 
Sbjct: 387  IKQNGLRPDIVSYTSLLNAYGRSRKPQKAREIFIMMKRNNLKPNIVSYNALIDAYGSNGL 446

Query: 1291 FEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNA 1470
             E+A  IL EM    I PNVV+I  LL AC    Q  +ID+++  A   G++LN  AYN+
Sbjct: 447  LEDAIEILREMEQDRIHPNVVSICTLLAACGRCYQKVKIDTVLSAAEMRGIKLNTVAYNS 506

Query: 1471 AMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELK 1650
            A+ +++N   Y++A+ LY  +++K+IK   VT+ +LI+G CK+  Y EA  F  EM  LK
Sbjct: 507  AIGSYINVGEYDKAIDLYNSMRKKNIKSDSVTYTVLISGCCKMSKYGEALSFMEEMMHLK 566

Query: 1651 VNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAY 1830
            ++ + EVY+++I AY KQG + EAE+ F  M + GC P+VVTYT M +AY   E W+KAY
Sbjct: 567  LSMSKEVYSSVICAYSKQGQITEAESTFNLMKSCGCNPDVVTYTAMLDAYNAAEKWEKAY 626

Query: 1831 SLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISAC 2010
            +LF+ ME N ++ D IA A +M   NKG QP  VL LAQ M+E+ +  S+ + FE++SAC
Sbjct: 627  ALFEEMEANEVKLDTIACAAVMRAFNKGGQPGMVLSLAQSMREKEIPLSDTIFFEMVSAC 686

Query: 2011 SKVRDWKMVDALMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTR 2190
            S + DWK    +++ +EP+L  +S   LN  L  +GKSGK+E M+K+++KM  SG     
Sbjct: 687  SLLHDWKTAVDVIKYMEPSLPVISSGCLNLFLHSLGKSGKIETMLKLFFKMLASGADVNF 746

Query: 2191 ETNEILAANISAAGKFKK 2244
             T  IL  N+ ++G ++K
Sbjct: 747  NTYSILLKNLLSSGNWRK 764



 Score =  199 bits (505), Expect = 6e-48
 Identities = 148/563 (26%), Positives = 258/563 (45%), Gaps = 2/563 (0%)
 Frame = +1

Query: 343  AIRVFNWMKNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEMQ--KWRCKPDVETYNA 516
            A+  F  MK  H  R      N++I    +    D+A  +F  M+  K  C PDV T+ +
Sbjct: 273  ALSYFELMKGTH-IRPDATTLNIIIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVTFTS 331

Query: 517  LIHVHGKAGQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENG 696
            +IH++  +GQ       F  ML   + PN  SYN L+ A  + G   EAL+V  ++ +NG
Sbjct: 332  IIHLYSVSGQIENCEAAFSMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNKIKQNG 391

Query: 697  VGPDLVTHNTVLSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAV 876
            + PD+V++ ++L+A     + +KA   F +MK   +KP+  + N +I    S    + A+
Sbjct: 392  LRPDIVSYTSLLNAYGRSRKPQKAREIFIMMKRNNLKPNIVSYNALIDAYGSNGLLEDAI 451

Query: 877  ETFYSMKRIGASDCKADVVTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLI 1056
            E    M++        +VV+  T++           + +V       GIK N V+YN+ I
Sbjct: 452  EILREMEQ---DRIHPNVVSICTLLAACGRCYQKVKIDTVLSAAEMRGIKLNTVAYNSAI 508

Query: 1057 SAYAYLGMCNEALEIFNLLEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVK 1236
             +Y  +G  ++A++++N + K   + D+V+YT L++   +  +  +A    + M  L + 
Sbjct: 509  GSYINVGEYDKAIDLYNSMRKKNIKSDSVTYTVLISGCCKMSKYGEALSFMEEMMHLKLS 568

Query: 1237 KNVVTYSSLIYAYGSQGEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSI 1416
             +   YSS+I AY  QG+  EA+S  + M   G  P+VVT + +LDA + + + ++  ++
Sbjct: 569  MSKEVYSSVICAYSKQGQITEAESTFNLMKSCGCNPDVVTYTAMLDAYNAAEKWEKAYAL 628

Query: 1417 IELANNAGVQLNVNAYNAAMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGACK 1596
             E      V+L+  A  A M AF  G      LSL + ++EK I  S   F  +++    
Sbjct: 629  FEEMEANEVKLDTIACAAVMRAFNKGGQPGMVLSLAQSMREKEIPLSDTIFFEMVSACSL 688

Query: 1597 LRGYVEAQFFFNEMCELKVNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNVVT 1776
            L  +  A      M       +       + +  K G +     +F KM+ASG   N  T
Sbjct: 689  LHDWKTAVDVIKYMEPSLPVISSGCLNLFLHSLGKSGKIETMLKLFFKMLASGADVNFNT 748

Query: 1777 YTTMFNAYGKKEMWQKAYSLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQKMK 1956
            Y+ +         W+K   + Q M+D  I   N  Y  + S   K    E   ++ +++ 
Sbjct: 749  YSILLKNLLSSGNWRKYLEVLQWMKDAGINPSNEMYRDISSFSQKCCGAENAAVIKERL- 807

Query: 1957 ERSVTFSEPVLFEVISACSKVRD 2025
                 FS  +   ++  C   R+
Sbjct: 808  GMDTLFSCCIDLRILLCCVLTRE 830


>ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355500155|gb|AES81358.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 855

 Score =  781 bits (2018), Expect = 0.0
 Identities = 392/731 (53%), Positives = 517/731 (70%), Gaps = 4/731 (0%)
 Frame = +1

Query: 64   KKVVRVDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEVVYEALKVDPQG 243
            KK   VDYD G H+   ++ GL K+ +   YR R+   R Q DWTVSEVV   L +  + 
Sbjct: 40   KKDGFVDYDRGHHQVSTKISGLRKEDIPAHYRLRVAGNRFQKDWTVSEVVDSVLSLTLRD 99

Query: 244  DIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNMLIRL 423
            DIE LLN W GRF RKNFP LIRE  + G+++H   VF+WMKNQ NY AR DIYNM+IRL
Sbjct: 100  DIEGLLNRWIGRFARKNFPFLIRELTQRGSIEHCNLVFSWMKNQKNYCARTDIYNMMIRL 159

Query: 424  HARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAVPPN 603
            HAR N TDQARGLFFEMQK RCKPD ETYNALI+ HG+AGQWRWAMNI DDMLR A+PP+
Sbjct: 160  HARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPS 219

Query: 604  RSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNGTQYKKALSYFE 783
            RS+YN LINACGSSG+W+EAL VCK+MT+NGVGPDLVTHN +L+A K+GTQY KALSYFE
Sbjct: 220  RSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFE 279

Query: 784  LMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADVVTFNTIMKGYA 963
            L+K   ++PDT T NIII CLV L+QYDKAV+ F SMK    S+C  DVVTF +++  Y+
Sbjct: 280  LIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKE-KKSECHPDVVTFTSMIHLYS 338

Query: 964  AIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKNGFRQDTV 1143
              G I++  + F MMLAEG+KPNIVSYN L+ AYA  GM NEAL++FN +++NGFR D V
Sbjct: 339  VCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVV 398

Query: 1144 SYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGEFEEAKSILDEM 1323
            SYTSLLNAYGR  +P+KA+EIF ++ + N+K N+V+Y++LI AYGS G  E+A  IL EM
Sbjct: 399  SYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREM 458

Query: 1324 ICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTAFMNGEMY 1503
                I PNVV+I  LL AC    Q  +ID+++  A   G++LN  AYN+A+ +++N   Y
Sbjct: 459  EQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEY 518

Query: 1504 ERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELKVNANVEVYTAL 1683
            ++A+ LY  +++K IK   VT+ +LI+G CK+  + EA  F  EM  LK+  + EVY+++
Sbjct: 519  DKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSI 578

Query: 1684 IDAYVKQ----GLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAYSLFQAME 1851
            I AY KQ    G + EAE+ F  M + GC P+VVTYT M +AY   E W+K Y+LF+ ME
Sbjct: 579  ICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEME 638

Query: 1852 DNNIEADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISACSKVRDWK 2031
            +N+++ D IA A LM   NKG QP +VL LAQ M+E+ +  S+ + FE++SAC  + DWK
Sbjct: 639  ENDVKLDTIACAALMRAFNKGGQPGRVLSLAQSMREKDIPLSDTIFFEMVSACGLLHDWK 698

Query: 2032 MVDALMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTRETNEILA 2211
                +++ +EP+L  +S   LN  L  +GKSGK+E M+K+++KM  SG +    T  IL 
Sbjct: 699  TAVDMIKYMEPSLPVISSGCLNLFLNSLGKSGKIEIMLKLFFKMLASGAEVNFNTYSILL 758

Query: 2212 ANISAAGKFKK 2244
             N+ ++G ++K
Sbjct: 759  KNLLSSGNWRK 769


>ref|XP_004304344.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like
            [Fragaria vesca subsp. vesca]
          Length = 847

 Score =  779 bits (2012), Expect = 0.0
 Identities = 382/727 (52%), Positives = 515/727 (70%)
 Frame = +1

Query: 64   KKVVRVDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEVVYEALKVDPQG 243
            KK V VDYD   H    ++ GL K  + K +R RL +   Q DW+VS+VV+   ++    
Sbjct: 30   KKHVSVDYDAATHTLSTQISGLRKRDIPKHHRLRLQTDPFQKDWSVSDVVHRVYQLRRYD 89

Query: 244  DIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNMLIRL 423
            DI+ +LN W GRF RKNFP+LIRE    G++ H ++VF WMK   NY AR DIYNMLIRL
Sbjct: 90   DIDGVLNRWVGRFARKNFPILIREMAARGSVDHCMQVFRWMKTLKNYCARTDIYNMLIRL 149

Query: 424  HARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAVPPN 603
            HAR  + DQARGLFFEMQ+WRCKPD E+YNALI+ HG+AGQWRWAMNI DDMLR A+PP+
Sbjct: 150  HARHTLVDQARGLFFEMQEWRCKPDAESYNALINAHGRAGQWRWAMNIMDDMLRAAIPPS 209

Query: 604  RSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNGTQYKKALSYFE 783
            RS+YN LINACGSSG+W EAL+ CK+MT+NGVGPDLVTHN VLSA K G QY KALSYFE
Sbjct: 210  RSTYNNLINACGSSGNWREALKACKKMTDNGVGPDLVTHNIVLSAYKTGAQYSKALSYFE 269

Query: 784  LMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADVVTFNTIMKGYA 963
            LMK   V+PDT TLNI+I CLV L QY KA++ F SM+  GA +C+ D+VTF +I++ Y+
Sbjct: 270  LMKGTNVRPDTTTLNIVIYCLVKLGQYGKAMDIFSSMRDKGA-ECRPDIVTFTSIIQLYS 328

Query: 964  AIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKNGFRQDTV 1143
              G I +  ++F  +LAEG+KPNIVSYN L+ AYA  GMC EA  +FN ++K+ FR D V
Sbjct: 329  VSGQIDNCTAIFNTILAEGLKPNIVSYNALLGAYASRGMCTEAASVFNEMKKSSFRPDVV 388

Query: 1144 SYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGEFEEAKSILDEM 1323
            SYTSLLNAYGR   PKKA+E+FD M   ++K N+V+Y++LI AYGS G   EA  +L EM
Sbjct: 389  SYTSLLNAYGRSQHPKKAREVFDRMKSNHLKPNLVSYNALINAYGSSGLLAEAVEVLREM 448

Query: 1324 ICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTAFMNGEMY 1503
               GI PN+V+I  LL AC    Q  +ID+I+  A   G+ LN  AYN+A+ ++MN   +
Sbjct: 449  EQDGIHPNIVSICTLLAACGQCGQKVKIDTILSAAKLRGIVLNTIAYNSAIGSYMNLGEH 508

Query: 1504 ERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELKVNANVEVYTAL 1683
            E+A++LY+ +++K +KP  VTF +LI+G CK+  Y EA  FF+EM +LK+  + EVY+++
Sbjct: 509  EKAINLYQLMRKKKVKPDSVTFNVLISGCCKMSKYSEAITFFDEMVDLKIPLSKEVYSSV 568

Query: 1684 IDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAYSLFQAMEDNNI 1863
            + AY K+G + EAE++F  M  +GC P++VTYT M +AY   E W+KA  LFQ M  N I
Sbjct: 569  LCAYSKKGQLLEAESVFNSMKMAGCPPDIVTYTAMLHAYSAAENWEKACELFQEMGINGI 628

Query: 1864 EADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISACSKVRDWKMVDA 2043
            + D IA A LM   NKG  P +VL+LA+ M+E+ + F++ + FE++SACS ++DW+    
Sbjct: 629  QPDAIACAALMRAFNKGGLPSRVLILAELMREKEIPFNDAIFFEMVSACSLLQDWRTTIQ 688

Query: 2044 LMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTRETNEILAANIS 2223
            L++ +EP+L +LS  ++NQ+L+ +G+SGK EAMMK++YK+  S      +T  IL  N+ 
Sbjct: 689  LIKVIEPSLPRLSVGLMNQLLQIMGRSGKTEAMMKLFYKIVASNGDINFDTYSILLKNLL 748

Query: 2224 AAGKFKK 2244
            + G ++K
Sbjct: 749  SVGSWRK 755



 Score =  119 bits (298), Expect = 6e-24
 Identities = 108/456 (23%), Positives = 193/456 (42%), Gaps = 105/456 (23%)
 Frame = +1

Query: 295  FPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEM 474
            F  +I+ +   G + +   +FN +  +   +     YN L+  +A   +  +A  +F EM
Sbjct: 320  FTSIIQLYSVSGQIDNCTAIFNTILAE-GLKPNIVSYNALLGAYASRGMCTEAASVFNEM 378

Query: 475  QKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHW 654
            +K   +PDV +Y +L++ +G++   + A  +FD M    + PN  SYN LINA GSSG  
Sbjct: 379  KKSSFRPDVVSYTSLLNAYGRSQHPKKAREVFDRMKSNHLKPNLVSYNALINAYGSSGLL 438

Query: 655  EEALRVCKQMTENGVGPDLVTH----------------NTVLSALK-------------- 744
             EA+ V ++M ++G+ P++V+                 +T+LSA K              
Sbjct: 439  AEAVEVLREMEQDGIHPNIVSICTLLAACGQCGQKVKIDTILSAAKLRGIVLNTIAYNSA 498

Query: 745  -----NGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAV----------- 876
                 N  +++KA++ ++LM++K VKPD+ T N++IS    + +Y +A+           
Sbjct: 499  IGSYMNLGEHEKAINLYQLMRKKKVKPDSVTFNVLISGCCKMSKYSEAITFFDEMVDLKI 558

Query: 877  ------------------------ETFYSMKRIGASDCKADVVTFNTIMKGYAAIGAIKD 984
                                      F SMK  G   C  D+VT+  ++  Y+A    + 
Sbjct: 559  PLSKEVYSSVLCAYSKKGQLLEAESVFNSMKMAG---CPPDIVTYTAMLHAYSAAENWEK 615

Query: 985  VRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLL-EKNGFRQDTVSY---- 1149
               +F+ M   GI+P+ ++   L+ A+   G+ +  L +  L+ EK     D + +    
Sbjct: 616  ACELFQEMGINGIQPDAIACAALMRAFNKGGLPSRVLILAELMREKEIPFNDAIFFEMVS 675

Query: 1150 ------------------------------TSLLNAYGRGGQPKKAKEIFDLMSKLNVKK 1239
                                            LL   GR G+ +   ++F  +   N   
Sbjct: 676  ACSLLQDWRTTIQLIKVIEPSLPRLSVGLMNQLLQIMGRSGKTEAMMKLFYKIVASNGDI 735

Query: 1240 NVVTYSSLIYAYGSQGEFEEAKSILDEMICAGIQPN 1347
            N  TYS L+    S G + +   +L  M+ A I+P+
Sbjct: 736  NFDTYSILLKNLLSVGSWRKYIEVLQWMVDARIRPS 771


>gb|EXC04358.1| hypothetical protein L484_015985 [Morus notabilis]
          Length = 846

 Score =  764 bits (1974), Expect = 0.0
 Identities = 381/727 (52%), Positives = 513/727 (70%)
 Frame = +1

Query: 64   KKVVRVDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEVVYEALKVDPQG 243
            +K V VDYD G H+    + GL K  + KR+R ++ + R Q DWT+SEV      +    
Sbjct: 41   RKRVSVDYDRGTHDVSTRLPGLRKADIPKRHRLQVQNDRFQKDWTISEVADRVSDLRRWD 100

Query: 244  DIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNMLIRL 423
            D++ LLN W GRF RKNFPLLIRE  + G+L+H +RV +WMKNQ NY AR DIYNM+IRL
Sbjct: 101  DVDGLLNCWIGRFARKNFPLLIREMTRRGSLEHCVRVLSWMKNQKNYCARTDIYNMMIRL 160

Query: 424  HARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAVPPN 603
             AR N TDQARGLFFEMQ+WRCKPDVETYNALI+ HG+AGQWRWAMNI +DMLR A+PP+
Sbjct: 161  CARHNQTDQARGLFFEMQEWRCKPDVETYNALINAHGRAGQWRWAMNIMEDMLRAAIPPS 220

Query: 604  RSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNGTQYKKALSYFE 783
            RS+YN LINACGSSG+W EAL+VC +MT+NGVGPDLVTHN +LSA K G QY KA SYFE
Sbjct: 221  RSTYNNLINACGSSGNWREALKVCNKMTDNGVGPDLVTHNIILSAYKTGAQYSKASSYFE 280

Query: 784  LMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADVVTFNTIMKGYA 963
            LMK  G++PDT TLNI+I CL+ L QY KA+E F SM+   A +C  DVVTF +I+  Y+
Sbjct: 281  LMKGTGIRPDTTTLNIVIHCLIKLGQYAKAIEIFNSMRNRKA-ECDPDVVTFTSIIHMYS 339

Query: 964  AIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKNGFRQDTV 1143
              G I++ ++VF  M+AEG+KPNI+SYNTL+ AYA  GM  EAL +FN ++++GFR D V
Sbjct: 340  VCGQIENCKAVFNTMVAEGLKPNIISYNTLLGAYASHGMDKEALSVFNEIKQSGFRPDIV 399

Query: 1144 SYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGEFEEAKSILDEM 1323
            SYTSLLNAYGR  QP+KA E+FD+M +   K N+V+Y++LI AYGS G   +A  +L EM
Sbjct: 400  SYTSLLNAYGRLKQPQKASEVFDMMKRDKWKPNLVSYNALIDAYGSSGLLAQAVEVLREM 459

Query: 1324 ICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTAFMNGEMY 1503
               GIQPN+V+I  LL AC    Q   ID+++  A   G++LN  AYN+A+ ++MN    
Sbjct: 460  EQNGIQPNIVSICTLLAACGRCGQKVNIDAVLSAAKLRGIKLNTVAYNSAIGSYMNTGEN 519

Query: 1504 ERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELKVNANVEVYTAL 1683
            ERA+SLY  +++K +KP  VT+ +LI+G C++  Y EA  FF+EM +LK+  +       
Sbjct: 520  ERAVSLYRSMRKKKVKPDSVTYTLLISGCCRMSKYDEALGFFDEMVDLKIPLS------- 572

Query: 1684 IDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAYSLFQAMEDNNI 1863
                  +G + +AE++F  + A G  P+VV YTTM +AY   E W+KA  LF+ ME N I
Sbjct: 573  -----NEGRLTKAESVFDLIKADGLCPDVVMYTTMVHAYVAAENWEKACILFEEMETNGI 627

Query: 1864 EADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISACSKVRDWKMVDA 2043
            + D+IA + +M   N+G Q  KVL+L + M+E+ + F++ +LFE+ISACS +RDW+    
Sbjct: 628  QPDSIACSAVMRAYNRGGQSSKVLILVEHMREKGIPFNDSILFEIISACSLLRDWRTTID 687

Query: 2044 LMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTRETNEILAANIS 2223
            L++ +EP+L  +S AV+NQ+L F+G+SGKVE MMK++YK+  SG +    T  IL  N+ 
Sbjct: 688  LIKLMEPSLPVVSIAVINQLLHFLGRSGKVETMMKLFYKIVASGAEINMSTYSILLKNLL 747

Query: 2224 AAGKFKK 2244
            ++G ++K
Sbjct: 748  SSGNWRK 754


>ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531022|gb|EEF32875.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 808

 Score =  763 bits (1970), Expect = 0.0
 Identities = 378/728 (51%), Positives = 515/728 (70%), Gaps = 1/728 (0%)
 Frame = +1

Query: 64   KKVVRVDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWTVSEVVYEALKVDPQ- 240
            KK   VDYD G H+   +V G  K  + KRYR ++   R Q DWT+S+VV + L+++P+ 
Sbjct: 32   KKSGFVDYDTGQHQVSTQVTGFRKCDLQKRYRLKVGGDRFQRDWTLSQVVSKILELNPKY 91

Query: 241  GDIESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMKNQHNYRARNDIYNMLIR 420
             D+E +LNHW GRF RKNFP LI+E  + GAL+H+  VF WMK Q NY AR D+YNM+IR
Sbjct: 92   DDVEVVLNHWIGRFARKNFPRLIKEITQRGALEHSNLVFRWMKLQKNYCARTDMYNMMIR 151

Query: 421  LHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQWRWAMNIFDDMLRMAVPP 600
            LHAR N+TDQARGLFFEMQ+WRCKPD ETYNALI+ HG+AGQWRWAMNI +DMLR A+PP
Sbjct: 152  LHARHNLTDQARGLFFEMQEWRCKPDSETYNALINAHGRAGQWRWAMNIMEDMLREAIPP 211

Query: 601  NRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTVLSALKNGTQYKKALSYF 780
            +RS+YN LINACGSSG+W EAL+V KQMTENGVGPDLVTHN VLSA K G QY KALSYF
Sbjct: 212  SRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKALSYF 271

Query: 781  ELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGASDCKADVVTFNTIMKGY 960
            ELMK   ++PDT T NI+I CLV L Q +KA++ F SM+   A +C+ D+VTF +I+  Y
Sbjct: 272  ELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMREKRA-ECRPDIVTFTSIIHLY 330

Query: 961  AAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNEALEIFNLLEKNGFRQDT 1140
            +  G +++ ++VF  MLAEG+ P IVSYN LI AYA+ GM  EAL +F  ++ +G   D 
Sbjct: 331  SLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDV 390

Query: 1141 VSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIYAYGSQGEFEEAKSILDE 1320
            VSYTSLL++YGR  QPKKA+E+F++M K  +K NVV++++LI AYGS G   +A  +L E
Sbjct: 391  VSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLRE 450

Query: 1321 MICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQLNVNAYNAAMTAFMNGEM 1500
            M   GI PN+VTI  LL AC    Q   ID+++  A   G++LN  A N+A+ ++MN   
Sbjct: 451  MEQDGIHPNIVTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGE 510

Query: 1501 YERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFFNEMCELKVNANVEVYTA 1680
            YE+A++LY  +++  + P+ VT+ +LI+G CK+  Y +A  FF +M ELK+    EV ++
Sbjct: 511  YEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKIALTKEVCSS 570

Query: 1681 LIDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKKEMWQKAYSLFQAMEDNN 1860
            +I AY KQG + EAE+IF  M  +GC P+++T+T M +AY   E W KA  L Q MED +
Sbjct: 571  VICAYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYD 630

Query: 1861 IEADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVLFEVISACSKVRDWKMVD 2040
            I+ D IA + LM   NK   P +VL+LA+ MKE+ + FS+ + FE++SACS +RDW+ + 
Sbjct: 631  IQLDTIACSALMRAFNKRGNPSQVLILAEFMKEKEIPFSDAIFFEMVSACSLLRDWRTIL 690

Query: 2041 ALMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQSGLQTTRETNEILAANI 2220
             LM+ +EP+ + +S  +LNQ+L  +G+SGK+E+MMK++YK+  SG +    T  I+  N+
Sbjct: 691  NLMKLMEPSFSVVSIGLLNQLLHVLGRSGKIESMMKLFYKITASGAEINFNTYSIMLKNL 750

Query: 2221 SAAGKFKK 2244
             A G ++K
Sbjct: 751  LAVGNWRK 758



 Score =  194 bits (492), Expect = 2e-46
 Identities = 146/539 (27%), Positives = 251/539 (46%), Gaps = 2/539 (0%)
 Frame = +1

Query: 343  AIRVFNWMKNQHNYRARNDIYNMLIRLHARFNITDQARGLFFEMQKWR--CKPDVETYNA 516
            A+  F  MK   N R      N++I    +    ++A  +F  M++ R  C+PD+ T+ +
Sbjct: 267  ALSYFELMKGT-NIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMREKRAECRPDIVTFTS 325

Query: 517  LIHVHGKAGQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENG 696
            +IH++  +GQ      +F  ML   + P   SYN LI A    G  EEAL V K++  +G
Sbjct: 326  IIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASG 385

Query: 697  VGPDLVTHNTVLSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAV 876
            + PD+V++ ++LS+     Q KKA   F +MK+  +KP+  + N +I    S      AV
Sbjct: 386  LLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAV 445

Query: 877  ETFYSMKRIGASDCKADVVTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLI 1056
            +    M++ G      ++VT  T++      G   ++ +V       GIK N V+ N+ I
Sbjct: 446  KVLREMEQDGIHP---NIVTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAI 502

Query: 1057 SAYAYLGMCNEALEIFNLLEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVK 1236
             +Y  +G   +A+ ++N + K     ++V+YT L++   +  +  KA E F  M +L + 
Sbjct: 503  GSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKIA 562

Query: 1237 KNVVTYSSLIYAYGSQGEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSI 1416
                  SS+I AY  QG+  EA+SI   M  AG  P+++T + +L A +      +   +
Sbjct: 563  LTKEVCSSVICAYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACDL 622

Query: 1417 IELANNAGVQLNVNAYNAAMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGACK 1596
            I+   +  +QL+  A +A M AF       + L L E +KEK I  S   F  +++    
Sbjct: 623  IQEMEDYDIQLDTIACSALMRAFNKRGNPSQVLILAEFMKEKEIPFSDAIFFEMVSACSL 682

Query: 1597 LRGYVEAQFFFNEMCELKVNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNVVT 1776
            LR +         M       ++ +   L+    + G +     +F K+ ASG   N  T
Sbjct: 683  LRDWRTILNLMKLMEPSFSVVSIGLLNQLLHVLGRSGKIESMMKLFYKITASGAEINFNT 742

Query: 1777 YTTMFNAYGKKEMWQKAYSLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQKM 1953
            Y+ M         W+K   + + MED  I+     Y  + S + KG   E   ++ +++
Sbjct: 743  YSIMLKNLLAVGNWRKYIEVLEWMEDAGIQPSIGMYYDISSYVQKGGGAEYAAIIQERV 801


>ref|XP_004955810.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like
            [Setaria italica]
          Length = 821

 Score =  763 bits (1969), Expect = 0.0
 Identities = 377/745 (50%), Positives = 513/745 (68%), Gaps = 3/745 (0%)
 Frame = +1

Query: 19   PSRGPQPQKKEWELPKKVVRVDYDEGFHERKEEVKGLGKDQVSKRYRKRLNSKRDQNDWT 198
            P R P P    W   +  V VD D G    + EV G+G   +  R+R R+   R Q DW 
Sbjct: 30   PPRAPGPPP--WAERRPAVSVDLDRGRRRARVEVDGVGAASLPARHRLRVEGTRWQRDWK 87

Query: 199  VSEVVYEALKVDPQGD---IESLLNHWAGRFHRKNFPLLIREFCKIGALKHAIRVFNWMK 369
            VSE     L + P+ D   ++ +LN WAGRF R+NFPLLIRE    G+LKHA+ VF WMK
Sbjct: 88   VSEAAARVLAL-PRADARAVDDVLNCWAGRFARRNFPLLIREITISGSLKHAVHVFRWMK 146

Query: 370  NQHNYRARNDIYNMLIRLHARFNITDQARGLFFEMQKWRCKPDVETYNALIHVHGKAGQW 549
            NQ NY ARNDIY M+IRLHAR N  DQARGLFFEMQ+WRCKPD +TYN+LIH H +AGQW
Sbjct: 147  NQENYCARNDIYGMMIRLHARHNQVDQARGLFFEMQEWRCKPDADTYNSLIHAHARAGQW 206

Query: 550  RWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTENGVGPDLVTHNTV 729
            RWA+NI +DM R A+PP R++YN +INACG++G+W++AL +CK+MTENGVGPDLVTHN V
Sbjct: 207  RWAINIMEDMQRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIV 266

Query: 730  LSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDKAVETFYSMKRIGA 909
            LSA KNG QY KA++YFE+MK   V PDT+TLNI+I CLV + QY +A+E F SM+    
Sbjct: 267  LSAFKNGAQYSKAIAYFEIMKSSNVAPDTFTLNIVIHCLVKVGQYGEAIELFNSMRE-KR 325

Query: 910  SDCKADVVTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNTLISAYAYLGMCNE 1089
            + C  DVVT+ +IM  Y+  G  ++ ++VF+MM+AEG+KPNIVSYN L+ AYA  G   E
Sbjct: 326  TICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMIAEGVKPNIVSYNALLGAYASHGAHKE 385

Query: 1090 ALEIFNLLEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLNVKKNVVTYSSLIY 1269
            ALE F LL++NG R D VSY+SLLNAYGR  QP+KA+++F+ M K   K N V+Y++LI 
Sbjct: 386  ALETFKLLKQNGLRPDIVSYSSLLNAYGRSAQPEKARDVFNEMRKNACKPNKVSYNALID 445

Query: 1270 AYGSQGEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQIDSIIELANNAGVQL 1449
            AYGS G  +EA S L EM   GIQP+VV+IS LL AC    Q  +ID+I+  A + G++L
Sbjct: 446  AYGSAGMLKEAVSFLHEMERDGIQPDVVSISTLLTACGRCRQLAKIDTILAAAKSRGIEL 505

Query: 1450 NVNAYNAAMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGACKLRGYVEAQFFF 1629
            N  AYN+ + ++++   YE+AL LY  ++  ++KP  VT+ ILI+G+CKL  Y E+  FF
Sbjct: 506  NTVAYNSGIGSYLSLGDYEKALELYTLMRASNVKPDAVTYNILISGSCKLGRYAESLKFF 565

Query: 1630 NEMCELKVNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNVVTYTTMFNAYGKK 1809
             +M +LK++   EVY+++I +YVKQG + EAE+ F  M  SGC+P+V+TYT M  AY   
Sbjct: 566  EDMMDLKIHLTKEVYSSVICSYVKQGKLTEAESTFSSMKESGCFPDVLTYTAMIKAYRDD 625

Query: 1810 EMWQKAYSLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQKMKERSVTFSEPVL 1989
              W++A+ LF+ ME N+++ D I  ++LM  LNKG QPE VL L + MK++ +  ++   
Sbjct: 626  GSWRRAWDLFKEMESNDVQPDAIVCSSLMEALNKGSQPEMVLQLMEFMKQKQIPLNQKAY 685

Query: 1990 FEVISACSKVRDWKMVDALMEDLEPALAKLSYAVLNQILKFIGKSGKVEAMMKIYYKMEQ 2169
            FE+I++CS +R+WK    ++E L+ +L+ +S   LN +L F+GK GK E+MMK++YKM  
Sbjct: 686  FEIIASCSMLREWKTASEIIEHLDSSLSSISVGTLNHLLNFLGKCGKTESMMKLFYKMVT 745

Query: 2170 SGLQTTRETNEILAANISAAGKFKK 2244
            S       T  +L  N+   GK++K
Sbjct: 746  SRSTVGLSTYTVLLRNLLVVGKWRK 770



 Score =  191 bits (485), Expect = 1e-45
 Identities = 139/541 (25%), Positives = 250/541 (46%), Gaps = 4/541 (0%)
 Frame = +1

Query: 343  AIRVFNWMKNQHNYRARNDIYNMLIRLHARFNITD--QARGLFFEMQKWR--CKPDVETY 510
            AI  F  MK+ +      D + + I +H    +    +A  LF  M++ R  C PDV TY
Sbjct: 279  AIAYFEIMKSSN---VAPDTFTLNIVIHCLVKVGQYGEAIELFNSMREKRTICPPDVVTY 335

Query: 511  NALIHVHGKAGQWRWAMNIFDDMLRMAVPPNRSSYNCLINACGSSGHWEEALRVCKQMTE 690
             ++++ +   GQ      +FD M+   V PN  SYN L+ A  S G  +EAL   K + +
Sbjct: 336  TSIMYSYSVCGQAENCKAVFDMMIAEGVKPNIVSYNALLGAYASHGAHKEALETFKLLKQ 395

Query: 691  NGVGPDLVTHNTVLSALKNGTQYKKALSYFELMKEKGVKPDTYTLNIIISCLVSLQQYDK 870
            NG+ PD+V+++++L+A     Q +KA   F  M++   KP+  + N +I    S     +
Sbjct: 396  NGLRPDIVSYSSLLNAYGRSAQPEKARDVFNEMRKNACKPNKVSYNALIDAYGSAGMLKE 455

Query: 871  AVETFYSMKRIGASDCKADVVTFNTIMKGYAAIGAIKDVRSVFEMMLAEGIKPNIVSYNT 1050
            AV   + M+R G    + DVV+ +T++        +  + ++     + GI+ N V+YN+
Sbjct: 456  AVSFLHEMERDGI---QPDVVSISTLLTACGRCRQLAKIDTILAAAKSRGIELNTVAYNS 512

Query: 1051 LISAYAYLGMCNEALEIFNLLEKNGFRQDTVSYTSLLNAYGRGGQPKKAKEIFDLMSKLN 1230
             I +Y  LG   +ALE++ L+  +  + D V+Y  L++   + G+  ++ + F+ M  L 
Sbjct: 513  GIGSYLSLGDYEKALELYTLMRASNVKPDAVTYNILISGSCKLGRYAESLKFFEDMMDLK 572

Query: 1231 VKKNVVTYSSLIYAYGSQGEFEEAKSILDEMICAGIQPNVVTISILLDACSHSSQPKQID 1410
            +      YSS+I +Y  QG+  EA+S    M  +G  P+V+T + ++ A       ++  
Sbjct: 573  IHLTKEVYSSVICSYVKQGKLTEAESTFSSMKESGCFPDVLTYTAMIKAYRDDGSWRRAW 632

Query: 1411 SIIELANNAGVQLNVNAYNAAMTAFMNGEMYERALSLYEQIKEKHIKPSVVTFCILINGA 1590
             + +   +  VQ +    ++ M A   G   E  L L E +K+K I  +   +  +I   
Sbjct: 633  DLFKEMESNDVQPDAIVCSSLMEALNKGSQPEMVLQLMEFMKQKQIPLNQKAYFEIIASC 692

Query: 1591 CKLRGYVEAQFFFNEMCELKVNANVEVYTALIDAYVKQGLVNEAETIFCKMVASGCYPNV 1770
              LR +  A      +     + +V     L++   K G       +F KMV S     +
Sbjct: 693  SMLREWKTASEIIEHLDSSLSSISVGTLNHLLNFLGKCGKTESMMKLFYKMVTSRSTVGL 752

Query: 1771 VTYTTMFNAYGKKEMWQKAYSLFQAMEDNNIEADNIAYATLMSILNKGEQPEKVLLLAQK 1950
             TYT +         W+K   +   MED  +      Y +++  + +    + V L+ +K
Sbjct: 753  STYTVLLRNLLVVGKWRKYIEVLHWMEDAGVHPTLYMYQSVLPYIWRDNSMDYVTLMQEK 812

Query: 1951 M 1953
            +
Sbjct: 813  I 813


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