BLASTX nr result

ID: Ephedra25_contig00004644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00004644
         (427 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40533.1| unknown [Picea sitchensis]                              59   5e-07
gb|ABK26282.1| unknown [Picea sitchensis]                              59   5e-07
gb|ABK25779.1| unknown [Picea sitchensis]                              59   5e-07
gb|ABK21651.1| unknown [Picea sitchensis]                              59   5e-07
gb|ABK21281.1| unknown [Picea sitchensis] gi|116780920|gb|ABK218...    59   5e-07
gb|AGP03463.1| chloroplast chlorophyll a-b binding protein CP29 ...    59   7e-07
gb|AEW08530.1| hypothetical protein CL265Contig2_04, partial [Pi...    55   9e-06

>gb|ACN40533.1| unknown [Picea sitchensis]
          Length = 249

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +1

Query: 1   EIKHSRLAMVAFLIFGIQALVTGKGPLTLFVQLLSSK 111
           EIKH+RLAMVAFLIF IQA VT KGPLTLFV+ L  K
Sbjct: 213 EIKHARLAMVAFLIFAIQAAVTSKGPLTLFVEFLGKK 249


>gb|ABK26282.1| unknown [Picea sitchensis]
          Length = 288

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +1

Query: 1   EIKHSRLAMVAFLIFGIQALVTGKGPLTLFVQLLSSK 111
           EIKH+RLAMVAFLIF IQA VT KGPLTLFV+ L  K
Sbjct: 252 EIKHARLAMVAFLIFAIQAAVTSKGPLTLFVEFLGKK 288


>gb|ABK25779.1| unknown [Picea sitchensis]
          Length = 288

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +1

Query: 1   EIKHSRLAMVAFLIFGIQALVTGKGPLTLFVQLLSSK 111
           EIKH+RLAMVAFLIF IQA VT KGPLTLFV+ L  K
Sbjct: 252 EIKHARLAMVAFLIFAIQAAVTSKGPLTLFVEFLGKK 288


>gb|ABK21651.1| unknown [Picea sitchensis]
          Length = 150

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +1

Query: 1   EIKHSRLAMVAFLIFGIQALVTGKGPLTLFVQLLSSK 111
           EIKH+RLAMVAFLIF IQA VT KGPLTLFV+ L  K
Sbjct: 114 EIKHARLAMVAFLIFAIQAAVTSKGPLTLFVEFLGKK 150


>gb|ABK21281.1| unknown [Picea sitchensis] gi|116780920|gb|ABK21880.1| unknown
           [Picea sitchensis] gi|116785937|gb|ABK23915.1| unknown
           [Picea sitchensis] gi|116792210|gb|ABK26276.1| unknown
           [Picea sitchensis] gi|224284045|gb|ACN39760.1| unknown
           [Picea sitchensis] gi|224285097|gb|ACN40276.1| unknown
           [Picea sitchensis]
          Length = 288

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +1

Query: 1   EIKHSRLAMVAFLIFGIQALVTGKGPLTLFVQLLSSK 111
           EIKH+RLAMVAFLIF IQA VT KGPLTLFV+ L  K
Sbjct: 252 EIKHARLAMVAFLIFAIQAAVTSKGPLTLFVEFLGKK 288


>gb|AGP03463.1| chloroplast chlorophyll a-b binding protein CP29 (chloroplast)
           [Ginkgo biloba]
          Length = 278

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = +1

Query: 1   EIKHSRLAMVAFLIFGIQALVTGKGPLTLFVQLLSSK 111
           EIKH RLAMVAFLIF IQA +TGKGP+ +FV +LS+K
Sbjct: 242 EIKHGRLAMVAFLIFAIQAAITGKGPVNIFVDILSNK 278


>gb|AEW08530.1| hypothetical protein CL265Contig2_04, partial [Pinus radiata]
           gi|383130109|gb|AFG45764.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130111|gb|AFG45765.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130113|gb|AFG45766.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130115|gb|AFG45767.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130117|gb|AFG45768.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130119|gb|AFG45769.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130121|gb|AFG45770.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130123|gb|AFG45771.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130125|gb|AFG45772.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130127|gb|AFG45773.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130129|gb|AFG45774.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130131|gb|AFG45775.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130133|gb|AFG45776.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130135|gb|AFG45777.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130137|gb|AFG45778.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130139|gb|AFG45779.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
           gi|383130141|gb|AFG45780.1| hypothetical protein
           CL265Contig2_04, partial [Pinus taeda]
          Length = 68

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = +1

Query: 1   EIKHSRLAMVAFLIFGIQALVTGKGPLTLFV 93
           EIKH+RLAMVAFLIF IQA VT KGPLTLFV
Sbjct: 38  EIKHARLAMVAFLIFAIQAAVTSKGPLTLFV 68


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