BLASTX nr result
ID: Ephedra25_contig00003920
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00003920
(405 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACN40407.1| unknown [Picea sitchensis] 96 5e-18
gb|EOX99608.1| Glycyl-tRNA synthetase / glycine--tRNA ligase [Th... 88 1e-15
ref|XP_006487557.1| PREDICTED: glycine--tRNA ligase 1, mitochond... 80 3e-13
ref|XP_006420796.1| hypothetical protein CICLE_v10004524mg [Citr... 79 6e-13
ref|XP_006420795.1| hypothetical protein CICLE_v10004524mg [Citr... 79 6e-13
gb|EMJ23105.1| hypothetical protein PRUPE_ppa001964mg [Prunus pe... 75 9e-12
ref|XP_002512672.1| glycyl-tRNA synthetase, putative [Ricinus co... 75 1e-11
ref|XP_004170329.1| PREDICTED: LOW QUALITY PROTEIN: glycine--tRN... 73 3e-11
ref|XP_004152844.1| PREDICTED: glycine--tRNA ligase 1, mitochond... 73 3e-11
ref|XP_006306915.1| hypothetical protein CARUB_v10008480mg [Caps... 73 4e-11
ref|XP_006297101.1| hypothetical protein CARUB_v10013104mg [Caps... 72 1e-10
ref|XP_002297878.2| Glycyl-tRNA synthetase family protein [Popul... 70 3e-10
ref|NP_564337.1| glycyl-tRNA synthetase / glycine--tRNA ligase [... 70 4e-10
ref|XP_002893587.1| glycyl-tRNA synthetase [Arabidopsis lyrata s... 70 4e-10
ref|XP_006415539.1| hypothetical protein EUTSA_v10006931mg [Eutr... 69 6e-10
gb|AAK92832.1| putative glycyl tRNA synthetase [Arabidopsis thal... 69 6e-10
gb|EXB81197.1| Glycine--tRNA ligase 1 [Morus notabilis] 68 1e-09
ref|XP_004310250.1| PREDICTED: glycine--tRNA ligase 1, mitochond... 68 1e-09
gb|AAM64494.1| glycyl tRNA synthetase, putative [Arabidopsis tha... 68 1e-09
dbj|BAE98387.1| glycyl-tRNA synthetase [Arabidopsis thaliana] 68 1e-09
>gb|ACN40407.1| unknown [Picea sitchensis]
Length = 740
Score = 95.9 bits (237), Expect = 5e-18
Identities = 51/80 (63%), Positives = 69/80 (86%)
Frame = +3
Query: 165 KSDVEELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKELQ 344
++DVE LR+ V +KQ+ V++ GDEVRALKA+KA+KE I+ A++ LK+LK+ELQSVSKELQ
Sbjct: 52 ETDVELLRKSVIEKQNIVEKQGDEVRALKASKASKEAIENAINQLKELKLELQSVSKELQ 111
Query: 345 SKLSGDESDGGMSREAFRQA 404
S+LS ++S G MS+EAFRQA
Sbjct: 112 SRLS-EDSGGAMSKEAFRQA 130
>gb|EOX99608.1| Glycyl-tRNA synthetase / glycine--tRNA ligase [Theobroma cacao]
Length = 739
Score = 87.8 bits (216), Expect = 1e-15
Identities = 54/133 (40%), Positives = 80/133 (60%)
Frame = +3
Query: 6 IVRTSVLRFTNPCLQPLLRNLNPLHQSKKTKNTTLRIVAKARPISSKARPIMEKSDVEEL 185
++ +SV N + LR+L+ L S K++ +TL +P + A E L
Sbjct: 7 LISSSVSFGLNSSSRLTLRHLHAL--SSKSQRSTLTTFFNWQPPMATAE--------ESL 56
Query: 186 REVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKELQSKLSGDE 365
R + +KQS V+ G+ VRALKAAKA+K +ID A+ AL LK+E S+ K+LQ+ +SG++
Sbjct: 57 RRALAEKQSAVEAQGNAVRALKAAKASKPEIDAAIEALNSLKLEKSSIEKQLQAAVSGND 116
Query: 366 SDGGMSREAFRQA 404
D +SREAFRQA
Sbjct: 117 GDASLSREAFRQA 129
>ref|XP_006487557.1| PREDICTED: glycine--tRNA ligase 1, mitochondrial-like [Citrus
sinensis]
Length = 735
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/80 (52%), Positives = 55/80 (68%)
Frame = +3
Query: 162 EKSDVEELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKEL 341
+ S+ E LR + +KQS VD G+ VRALKAAKA+K DID A+ +L LK+E SV +EL
Sbjct: 45 DASNEESLRRTLAEKQSAVDAQGNAVRALKAAKASKPDIDAAIESLNRLKLEKSSVEREL 104
Query: 342 QSKLSGDESDGGMSREAFRQ 401
QS +SG ++REAFRQ
Sbjct: 105 QSVVSGSGGGASVNREAFRQ 124
>ref|XP_006420796.1| hypothetical protein CICLE_v10004524mg [Citrus clementina]
gi|557522669|gb|ESR34036.1| hypothetical protein
CICLE_v10004524mg [Citrus clementina]
Length = 578
Score = 79.0 bits (193), Expect = 6e-13
Identities = 41/80 (51%), Positives = 55/80 (68%)
Frame = +3
Query: 162 EKSDVEELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKEL 341
+ S+ E LR + +KQS VD G+ VRALKAAKA+K +ID A+ +L LK+E SV +EL
Sbjct: 45 DASNEESLRRTLAEKQSAVDAQGNAVRALKAAKASKSEIDAAIESLNRLKLEKSSVEREL 104
Query: 342 QSKLSGDESDGGMSREAFRQ 401
QS +SG ++REAFRQ
Sbjct: 105 QSVVSGSGGGASVNREAFRQ 124
>ref|XP_006420795.1| hypothetical protein CICLE_v10004524mg [Citrus clementina]
gi|557522668|gb|ESR34035.1| hypothetical protein
CICLE_v10004524mg [Citrus clementina]
Length = 646
Score = 79.0 bits (193), Expect = 6e-13
Identities = 41/80 (51%), Positives = 55/80 (68%)
Frame = +3
Query: 162 EKSDVEELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKEL 341
+ S+ E LR + +KQS VD G+ VRALKAAKA+K +ID A+ +L LK+E SV +EL
Sbjct: 45 DASNEESLRRTLAEKQSAVDAQGNAVRALKAAKASKSEIDAAIESLNRLKLEKSSVEREL 104
Query: 342 QSKLSGDESDGGMSREAFRQ 401
QS +SG ++REAFRQ
Sbjct: 105 QSVVSGSGGGASVNREAFRQ 124
>gb|EMJ23105.1| hypothetical protein PRUPE_ppa001964mg [Prunus persica]
Length = 735
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = +3
Query: 177 EELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKELQSKLS 356
+ LR+ + KQS V+ G++VR+LKA KAAK +ID A+ AL LK++ S+ K+LQ+ LS
Sbjct: 52 DSLRKALADKQSEVENQGNQVRSLKAGKAAKSEIDAAIEALNALKLQKASIEKDLQATLS 111
Query: 357 GDESDGGMSREAFRQA 404
+DG ++REAFRQA
Sbjct: 112 --SADGSLNREAFRQA 125
>ref|XP_002512672.1| glycyl-tRNA synthetase, putative [Ricinus communis]
gi|223548633|gb|EEF50124.1| glycyl-tRNA synthetase,
putative [Ricinus communis]
Length = 686
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/82 (43%), Positives = 57/82 (69%)
Frame = +3
Query: 159 MEKSDVEELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKE 338
M + + LR + +K S V+ G+ +R+LKA+KAAK ++D A+ +L LK+E S+ K+
Sbjct: 1 MATASEDSLRTALAEKLSAVEAQGNALRSLKASKAAKAEVDAAIESLNALKLEKSSIEKQ 60
Query: 339 LQSKLSGDESDGGMSREAFRQA 404
LQ+ +SG+ +D +SREAFRQA
Sbjct: 61 LQAAVSGNAADSSVSREAFRQA 82
>ref|XP_004170329.1| PREDICTED: LOW QUALITY PROTEIN: glycine--tRNA ligase 1,
mitochondrial-like [Cucumis sativus]
Length = 729
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/78 (50%), Positives = 51/78 (65%)
Frame = +3
Query: 168 SDVEELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKELQS 347
S LR + Q S V+ G+ VRALKAA AAK +ID A+ AL LKIE S+ K+LQ+
Sbjct: 41 SSEASLRNALSQNLSAVEAQGNAVRALKAAGAAKPEIDAAIEALNALKIEKASIEKQLQA 100
Query: 348 KLSGDESDGGMSREAFRQ 401
+SG DG ++RE+FRQ
Sbjct: 101 AVSGGGGDGSLNRESFRQ 118
>ref|XP_004152844.1| PREDICTED: glycine--tRNA ligase 1, mitochondrial-like [Cucumis
sativus]
Length = 729
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/78 (50%), Positives = 51/78 (65%)
Frame = +3
Query: 168 SDVEELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKELQS 347
S LR + Q S V+ G+ VRALKAA AAK +ID A+ AL LKIE S+ K+LQ+
Sbjct: 41 SSEASLRNALSQNLSAVEAQGNAVRALKAAGAAKPEIDAAIEALNALKIEKASIEKQLQA 100
Query: 348 KLSGDESDGGMSREAFRQ 401
+SG DG ++RE+FRQ
Sbjct: 101 AVSGGGGDGSLNRESFRQ 118
>ref|XP_006306915.1| hypothetical protein CARUB_v10008480mg [Capsella rubella]
gi|482575626|gb|EOA39813.1| hypothetical protein
CARUB_v10008480mg [Capsella rubella]
Length = 690
Score = 72.8 bits (177), Expect = 4e-11
Identities = 38/76 (50%), Positives = 54/76 (71%)
Frame = +3
Query: 177 EELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKELQSKLS 356
+ LR+ + +K S V+ G+ VRALKA++AAK DID A+ L LK+E +V KELQS +S
Sbjct: 6 QSLRQSLSEKSSSVEAQGNAVRALKASRAAKPDIDAAIELLNKLKLEKSAVEKELQSTIS 65
Query: 357 GDESDGGMSREAFRQA 404
G +G ++REAFR+A
Sbjct: 66 G-SGNGSLNREAFRKA 80
>ref|XP_006297101.1| hypothetical protein CARUB_v10013104mg [Capsella rubella]
gi|482565810|gb|EOA29999.1| hypothetical protein
CARUB_v10013104mg [Capsella rubella]
Length = 691
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/76 (50%), Positives = 54/76 (71%)
Frame = +3
Query: 177 EELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKELQSKLS 356
+ LR+ + +K S V+ G+ VRALKA++AAK DID A+ L LK+E +V KELQS +S
Sbjct: 6 QSLRQSLSEKSSSVEAQGNAVRALKASRAAKPDIDAAIELLNKLKLEKSAVEKELQSIVS 65
Query: 357 GDESDGGMSREAFRQA 404
G +G ++REAFR+A
Sbjct: 66 G-SGNGSLNREAFRKA 80
>ref|XP_002297878.2| Glycyl-tRNA synthetase family protein [Populus trichocarpa]
gi|550347131|gb|EEE82683.2| Glycyl-tRNA synthetase
family protein [Populus trichocarpa]
Length = 690
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = +3
Query: 183 LREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKELQSKLSGD 362
LR + +KQS ++ G+ VRALKA+ A K D+D A+ L LK+E S+ K+LQ+ +SG+
Sbjct: 8 LRRALVEKQSSIESQGNAVRALKASNAVKADVDEAIEKLNALKLEKSSIEKQLQAAVSGN 67
Query: 363 ESDGGMSREAFRQA 404
DG +++EAFRQA
Sbjct: 68 -PDGSVNKEAFRQA 80
>ref|NP_564337.1| glycyl-tRNA synthetase / glycine--tRNA ligase [Arabidopsis
thaliana] gi|3334349|sp|O23627.1|SYGM1_ARATH RecName:
Full=Glycine--tRNA ligase 1, mitochondrial; AltName:
Full=Diadenosine tetraphosphate synthetase; Short=AP-4-A
synthetase; AltName: Full=Glycyl-tRNA synthetase 1;
Short=GlyRS 1; Flags: Precursor
gi|9972358|gb|AAG10608.1|AC008030_8 glycyl-tRNA
synthetase [Arabidopsis thaliana]
gi|2564215|emb|CAA05162.1| glycyl-tRNA synthetase
[Arabidopsis thaliana] gi|332193024|gb|AEE31145.1|
glycyl-tRNA synthetase / glycine--tRNA ligase
[Arabidopsis thaliana]
Length = 729
Score = 69.7 bits (169), Expect = 4e-10
Identities = 40/91 (43%), Positives = 58/91 (63%)
Frame = +3
Query: 132 PISSKARPIMEKSDVEELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLK 311
PIS I + + LR+ + +K S V+ G+ VRALKA++AAK +ID A+ L LK
Sbjct: 30 PISIAPIQIPMDATEQSLRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAIEQLNKLK 89
Query: 312 IELQSVSKELQSKLSGDESDGGMSREAFRQA 404
+E +V KELQS +S +G ++REAFR+A
Sbjct: 90 LEKSTVEKELQSIIS-SSGNGSLNREAFRKA 119
>ref|XP_002893587.1| glycyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
gi|297339429|gb|EFH69846.1| glycyl-tRNA synthetase
[Arabidopsis lyrata subsp. lyrata]
Length = 730
Score = 69.7 bits (169), Expect = 4e-10
Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +3
Query: 153 PIMEKSDVEE-LREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSV 329
PI D E+ LR+ + +K S V+ G+ VRALKA++AAK +ID A+ L LK+E +V
Sbjct: 37 PIQIPMDAEQSLRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAIEQLNRLKLEKSAV 96
Query: 330 SKELQSKLSGDESDGGMSREAFRQA 404
KELQS +S +G ++REAFR+A
Sbjct: 97 EKELQSIIS-SSGNGSLNREAFRKA 120
>ref|XP_006415539.1| hypothetical protein EUTSA_v10006931mg [Eutrema salsugineum]
gi|557093310|gb|ESQ33892.1| hypothetical protein
EUTSA_v10006931mg [Eutrema salsugineum]
Length = 725
Score = 68.9 bits (167), Expect = 6e-10
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = +3
Query: 153 PIMEKSDVEE--LREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQS 326
PI D E LR + +K S V+ G+ VRALKAA+AAK +ID A+ L LK+E +
Sbjct: 29 PIQIPMDATEQSLRHSLSEKSSSVEAQGNAVRALKAARAAKPEIDAAIELLNKLKLEKSA 88
Query: 327 VSKELQSKLSGDESDGGMSREAFRQA 404
V K+LQS ++ +G ++REAFRQA
Sbjct: 89 VEKQLQSTIT-SSGNGSLNREAFRQA 113
>gb|AAK92832.1| putative glycyl tRNA synthetase [Arabidopsis thaliana]
Length = 729
Score = 68.9 bits (167), Expect = 6e-10
Identities = 40/91 (43%), Positives = 58/91 (63%)
Frame = +3
Query: 132 PISSKARPIMEKSDVEELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLK 311
PIS I + + LR+ + +K S V+ G+ VRALKA++AAK +ID A+ L LK
Sbjct: 30 PISIAPIQIPMDATEQSLRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAMEQLNKLK 89
Query: 312 IELQSVSKELQSKLSGDESDGGMSREAFRQA 404
+E +V KELQS +S +G ++REAFR+A
Sbjct: 90 LEKSTVEKELQSIIS-SSGNGSLNREAFRKA 119
>gb|EXB81197.1| Glycine--tRNA ligase 1 [Morus notabilis]
Length = 693
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/79 (44%), Positives = 50/79 (63%)
Frame = +3
Query: 168 SDVEELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKELQS 347
S + LR + KQS V+ + VRALKAA A K D++ A+ AL LK++ S+ K+LQ+
Sbjct: 3 SSEDSLRRALADKQSAVEAQANSVRALKAAGAPKPDVETAIEALNALKLQKASIEKDLQA 62
Query: 348 KLSGDESDGGMSREAFRQA 404
++G +SREAFRQA
Sbjct: 63 AVTGAADGSAVSREAFRQA 81
>ref|XP_004310250.1| PREDICTED: glycine--tRNA ligase 1, mitochondrial-like [Fragaria
vesca subsp. vesca]
Length = 769
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/76 (42%), Positives = 52/76 (68%)
Frame = +3
Query: 177 EELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKELQSKLS 356
+ LR+ + K S V+ G++VRALK + AAK ++D A+ AL LK+E ++ K+LQ+ +S
Sbjct: 81 DNLRQALSAKLSEVESQGNQVRALKQSGAAKPELDAAIEALNALKLEKATIEKDLQATIS 140
Query: 357 GDESDGGMSREAFRQA 404
G + G +++EA RQA
Sbjct: 141 GGDGGGSLNKEALRQA 156
>gb|AAM64494.1| glycyl tRNA synthetase, putative [Arabidopsis thaliana]
Length = 690
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = +3
Query: 177 EELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKELQSKLS 356
+ LR+ + +K S V+ G+ VRALKA++AAK +ID A+ L LK+E +V KELQS +S
Sbjct: 6 QSLRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAIEQLNKLKLEKSTVEKELQSIIS 65
Query: 357 GDESDGGMSREAFRQA 404
+G ++REAFR+A
Sbjct: 66 -SSGNGSLNREAFRKA 80
>dbj|BAE98387.1| glycyl-tRNA synthetase [Arabidopsis thaliana]
Length = 519
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = +3
Query: 177 EELREVVRQKQSRVDRAGDEVRALKAAKAAKEDIDRAVSALKDLKIELQSVSKELQSKLS 356
+ LR+ + +K S V+ G+ VRALKA++AAK +ID A+ L LK+E +V KELQS +S
Sbjct: 6 QSLRQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAIEQLNKLKLEKSTVEKELQSIIS 65
Query: 357 GDESDGGMSREAFRQA 404
+G ++REAFR+A
Sbjct: 66 -SSGNGSLNREAFRKA 80