BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00003417
         (1447 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166598.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cuc...   164   9e-38
ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cuc...   164   9e-38
ref|XP_004238343.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sol...   159   4e-36
ref|XP_006342032.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sol...   155   5e-35
gb|EXC00968.1| 5'-3' exoribonuclease 3 [Morus notabilis]              154   9e-35
ref|XP_006645090.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   154   1e-34
ref|XP_006645089.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   154   1e-34
gb|EPS72841.1| hypothetical protein M569_01916 [Genlisea aurea]       150   1e-33
gb|ESW32674.1| hypothetical protein PHAVU_001G007900g [Phaseolus...   149   3e-33
dbj|BAJ89859.1| predicted protein [Hordeum vulgare subsp. vulgare]    149   3e-33
gb|EEE55749.1| hypothetical protein OsJ_04252 [Oryza sativa Japo...   148   5e-33
gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indi...   148   5e-33
ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group] g...   148   5e-33
ref|XP_004972701.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   147   1e-32
ref|XP_004972700.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   147   1e-32
ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   146   2e-32
ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like isof...   146   2e-32
ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Bra...   144   9e-32
gb|AFW61093.1| hypothetical protein ZEAMMB73_651968 [Zea mays]        144   1e-31
gb|AFW61091.1| hypothetical protein ZEAMMB73_651968 [Zea mays]        144   1e-31

>ref|XP_004166598.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
          Length = 590

 Score =  164 bits (415), Expect = 9e-38
 Identities = 98/261 (37%), Positives = 140/261 (53%), Gaps = 11/261 (4%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            +S  ++  QL+ +DR E+ E I+P  SEGMNG++  C G+ CPPIF SP++G+E+I+DNQ
Sbjct: 230  YSLDNRCKQLAERDRTEVKEKINPEHSEGMNGYLSPCLGELCPPIFRSPVEGLEDIIDNQ 289

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEE-GRRHSQYQDNGRQEY 1092
            V+  IY+ P  HKH+T+PP GV  P K V   ++KP P LWHE+ GRRH  +QDNGR   
Sbjct: 290  VICAIYRLPDVHKHITQPPAGVNFPPKIVSLGDMKPEPVLWHEDSGRRHHHHQDNGRYNE 349

Query: 1091 KREMNHGSNYGPPRVGEPAHRFITNSLQIRNGSTMP----RAPAGGGILDIQSPYSQSSY 924
                N        ++G+ AHR + NSLQ+R G        +AP    +     PY     
Sbjct: 350  NGRPNPPGAISGRQLGDAAHRLVVNSLQVRGGDRTGHNNWQAPP---LSHTAQPYIPGQP 406

Query: 923  GRHGNR--MSSDQR---SMPPDHHAYPNGSQHSHHTPIDRPINYVAPNQNYGYQNAPRLN 759
              H +R   S DQ     MPP     PN SQ  H+T           +Q++GY   P  +
Sbjct: 407  PSHSHRDYRSRDQAVDYRMPPG--GRPNYSQGHHNT--------ARGHQDHGYHQPPAGH 456

Query: 758  YNSDVSNQSYRYPDASRTNYS 696
            ++ D+ + S  Y + +    S
Sbjct: 457  HHRDMRHHSQHYNNRAHNQVS 477


>ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
          Length = 1101

 Score =  164 bits (415), Expect = 9e-38
 Identities = 98/261 (37%), Positives = 140/261 (53%), Gaps = 11/261 (4%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            +S  ++  QL+ +DR E+ E I+P  SEGMNG++  C G+ CPPIF SP++G+E+I+DNQ
Sbjct: 741  YSLDNRCKQLAERDRTEVKEKINPEHSEGMNGYLSPCLGELCPPIFRSPVEGLEDIIDNQ 800

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEE-GRRHSQYQDNGRQEY 1092
            V+  IY+ P  HKH+T+PP GV  P K V   ++KP P LWHE+ GRRH  +QDNGR   
Sbjct: 801  VICAIYRLPDVHKHITQPPAGVNFPPKIVSLGDMKPEPVLWHEDSGRRHHHHQDNGRYNE 860

Query: 1091 KREMNHGSNYGPPRVGEPAHRFITNSLQIRNGSTMP----RAPAGGGILDIQSPYSQSSY 924
                N        ++G+ AHR + NSLQ+R G        +AP    +     PY     
Sbjct: 861  NGRPNPPGAISGRQLGDAAHRLVVNSLQVRGGDRTGHNNWQAPP---LSHTAQPYIPGQP 917

Query: 923  GRHGNR--MSSDQR---SMPPDHHAYPNGSQHSHHTPIDRPINYVAPNQNYGYQNAPRLN 759
              H +R   S DQ     MPP     PN SQ  H+T           +Q++GY   P  +
Sbjct: 918  PSHSHRDYRSRDQAVDYRMPPG--GRPNYSQGHHNT--------ARGHQDHGYHQPPAGH 967

Query: 758  YNSDVSNQSYRYPDASRTNYS 696
            ++ D+ + S  Y + +    S
Sbjct: 968  HHRDMRHHSQHYNNRAHNQVS 988


>ref|XP_004238343.1| PREDICTED: 5'-3' exoribonuclease 3-like [Solanum lycopersicum]
          Length = 1109

 Score =  159 bits (401), Expect = 4e-36
 Identities = 103/272 (37%), Positives = 141/272 (51%), Gaps = 20/272 (7%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            FS  D+  QL+  +R+E+ E +DP +S GMNG++ LC GD CPPIF +P+ G+E+I+DNQ
Sbjct: 758  FSLDDRCKQLTDDERVEVKERLDPKASGGMNGYISLCMGDPCPPIFRAPMDGLEDIMDNQ 817

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEEGRRHSQYQDNGRQEYK 1089
            V+  IYK P  HKH+TRPPKGV  PKK V   ++KP P LWHE         D+GR+ ++
Sbjct: 818  VICAIYKLPDAHKHITRPPKGVIFPKKMVTFSDIKPDPVLWHE---------DSGRKPWE 868

Query: 1088 REMNH--GSNYGPPRVGEPAHRFITNSLQIRNGSTMPRAPAGGGILDIQSPY------SQ 933
               NH  G N G   +GE AHR ++NSLQIR+G        G  +     PY      S 
Sbjct: 869  NGRNHHPGGNSG-RHLGEAAHRLVSNSLQIRSG-------RGDNLHAQPGPYPSGPFPSS 920

Query: 932  SSYGRHGNRMSSDQRSMPPDHHAYPNGSQHSHH-----TPIDRPINYVAPNQNYGYQNAP 768
              Y   G+   +   S   +  A P     S+H       +D P +   P    G Q AP
Sbjct: 921  QGYNGQGHVRPNFDYSARDETAAAPYQYDQSYHPAYIPAAVD-PYSRAPPLYEMGGQPAP 979

Query: 767  ------RLNYNSDVSNQSYRYPDASRTNYSYH 690
                  R  + + V+ Q+  Y  +S TN   H
Sbjct: 980  PSRDYHRHGHQAAVTQQNVGYSYSSHTNRQQH 1011


>ref|XP_006342032.1| PREDICTED: 5'-3' exoribonuclease 3-like [Solanum tuberosum]
          Length = 1099

 Score =  155 bits (391), Expect = 5e-35
 Identities = 104/271 (38%), Positives = 142/271 (52%), Gaps = 19/271 (7%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            FS  D+  QL+  +R+E+ E +DP +S GMNG++ LC GD CPPIF +P+ G+E+I+DNQ
Sbjct: 749  FSLDDRCKQLTDNERVEVKERLDPKASGGMNGYISLCMGDPCPPIFRAPMDGLEDIMDNQ 808

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEEGRRHSQYQDNGRQEYK 1089
            V+  IYK P  HKH+TRPPKGV  PKK V   ++KP P LWHE         D+GR+ ++
Sbjct: 809  VICAIYKLPDVHKHITRPPKGVIFPKKMVTFSDIKPDPVLWHE---------DSGRKPWE 859

Query: 1088 REMNH--GSNYGPPRVGEPAHRFITNSLQIRNG-----STMPRAPAGGGILDIQSPYSQS 930
               NH  G N G   +GE AHR ++NSLQIR+G        P     G       P SQ 
Sbjct: 860  NGRNHHPGGNSG-RHLGEAAHRLVSNSLQIRSGRGDNLHAQPVPYPSGPF-----PSSQG 913

Query: 929  SYGRHGNRMSSDQRSMPPDHHAYPNGSQHSHH-----TPIDRPINYVAPNQNYGYQNAP- 768
              G+   R + D  +   D  A P     S+H     T +D P +   P    G Q  P 
Sbjct: 914  YNGQGHVRPNFDYSAR--DDTAAPYQYDQSYHPAYIPTAVD-PYSRAPPLYETGGQPVPP 970

Query: 767  -----RLNYNSDVSNQSYRYPDASRTNYSYH 690
                 R  +++ V+ Q+  Y  +S  N   H
Sbjct: 971  SRDYHRHGHHAAVTQQNVGYSYSSHANRPQH 1001


>gb|EXC00968.1| 5'-3' exoribonuclease 3 [Morus notabilis]
          Length = 1082

 Score =  154 bits (389), Expect = 9e-35
 Identities = 100/260 (38%), Positives = 141/260 (54%), Gaps = 11/260 (4%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDP----ISSEGMNGFMCLCDGDACPPIFTSPIKGMENI 1278
            +S  D+  QLS  +R E+ E IDP      S+GMNG++  C G+ CPP+F SP+ GME+I
Sbjct: 718  YSLDDRCKQLSNSERAEIKERIDPQIRAACSDGMNGYLSPCGGEPCPPVFRSPVSGMEDI 777

Query: 1277 LDNQVLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEE-GRRHSQYQDNG 1104
            +DNQV+  IY+ P  HKH+TRP  GV+ PKK V   ++K  P LWHE+ GRRH    +NG
Sbjct: 778  MDNQVICAIYRLPDAHKHITRPLAGVKFPKKIVTLGDLKTDPVLWHEDSGRRHF---ENG 834

Query: 1103 RQEYKREMNHGSNYGPPRVGEPAHRFITNSLQI---RNGSTMPRAPAGGGILDIQSPYSQ 933
            RQ      NH  +     +GE A R + NSLQ+   RNG   P           Q    Q
Sbjct: 835  RQ------NHSRDLSGRHLGEAATRLVVNSLQVKADRNGYCNPMHVHPPPYPGAQHTQFQ 888

Query: 932  SSYGRHGNRMSSDQRSMPPDHHAYPNGSQHSHHTPIDRPINYVAPNQNYGYQN-APRLNY 756
            SSYG        +QR     HH  P   + + H P    + + + NQ+YG +    R NY
Sbjct: 889  SSYG--------NQRFHDQGHHRMP--PRGTFHPP---EVQFQSSNQSYGDRGYNERHNY 935

Query: 755  NSDVSNQSYRYP-DASRTNY 699
            +   ++ ++R+P + S++NY
Sbjct: 936  SDRHASSAHRHPHNGSQSNY 955


>ref|XP_006645090.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Oryza
            brachyantha]
          Length = 858

 Score =  154 bits (388), Expect = 1e-34
 Identities = 112/324 (34%), Positives = 144/324 (44%), Gaps = 57/324 (17%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            +S   K   L  K+R  + E IDP SS GMNG++ LC+GD CPP+F SP+ G+E+I+DNQ
Sbjct: 517  YSLNSKFGHLPNKERNAIKEKIDPSSSGGMNGYISLCNGDPCPPVFRSPVDGLEDIMDNQ 576

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEE-GRRHSQYQDNGRQEY 1092
            V+  IYK P  HKH+ RPP GV +PKK+VE  ++KP P LWHE+ GRR   Y +N R+ Y
Sbjct: 577  VICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWHEDSGRR--PYDNNNRRPY 634

Query: 1091 K--REMNHGSNYGPPRVGEPAHRFITNSLQIRNGS-----TMP----------------- 984
            +     N        ++GE AHR + NSL +R G+     +MP                 
Sbjct: 635  ENSNRQNPAGAISGHQLGEAAHRLVVNSLNVRGGAQYNAPSMPYQTIMNGMHYPNGIPPT 694

Query: 983  -RAPAGGGILDIQSPYSQ------------------SSYGR--HGN-----RMSSDQRSM 882
               PA G  +    P  Q                  S YGR  HG      R   D R  
Sbjct: 695  IEQPAPGWHVPGDQPNGQVPAYALSSGHRQNDRSGPSQYGRDNHGRQYPYARDHHDSRGR 754

Query: 881  PPDHHAYPNGSQHSHHTPIDRPINYVAP-----NQNYGYQNAPRLNYNSDVSNQSYRYPD 717
             P +H        SH  P   P  Y  P         GYQ AP   Y      Q  + P 
Sbjct: 755  VPPYHQSGGSPYPSHSAPSAGPGRYAQPPTYAGGYGRGYQPAP---YGRGQQWQQQQQP- 810

Query: 716  ASRTNYSYHAPSNLTDRGHGPSNP 645
                 Y  +A S     G  P+ P
Sbjct: 811  -----YGSYAGSGPYGGGAPPARP 829


>ref|XP_006645089.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Oryza
            brachyantha]
          Length = 1066

 Score =  154 bits (388), Expect = 1e-34
 Identities = 112/324 (34%), Positives = 144/324 (44%), Gaps = 57/324 (17%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            +S   K   L  K+R  + E IDP SS GMNG++ LC+GD CPP+F SP+ G+E+I+DNQ
Sbjct: 725  YSLNSKFGHLPNKERNAIKEKIDPSSSGGMNGYISLCNGDPCPPVFRSPVDGLEDIMDNQ 784

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEE-GRRHSQYQDNGRQEY 1092
            V+  IYK P  HKH+ RPP GV +PKK+VE  ++KP P LWHE+ GRR   Y +N R+ Y
Sbjct: 785  VICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWHEDSGRR--PYDNNNRRPY 842

Query: 1091 K--REMNHGSNYGPPRVGEPAHRFITNSLQIRNGS-----TMP----------------- 984
            +     N        ++GE AHR + NSL +R G+     +MP                 
Sbjct: 843  ENSNRQNPAGAISGHQLGEAAHRLVVNSLNVRGGAQYNAPSMPYQTIMNGMHYPNGIPPT 902

Query: 983  -RAPAGGGILDIQSPYSQ------------------SSYGR--HGN-----RMSSDQRSM 882
               PA G  +    P  Q                  S YGR  HG      R   D R  
Sbjct: 903  IEQPAPGWHVPGDQPNGQVPAYALSSGHRQNDRSGPSQYGRDNHGRQYPYARDHHDSRGR 962

Query: 881  PPDHHAYPNGSQHSHHTPIDRPINYVAP-----NQNYGYQNAPRLNYNSDVSNQSYRYPD 717
             P +H        SH  P   P  Y  P         GYQ AP   Y      Q  + P 
Sbjct: 963  VPPYHQSGGSPYPSHSAPSAGPGRYAQPPTYAGGYGRGYQPAP---YGRGQQWQQQQQP- 1018

Query: 716  ASRTNYSYHAPSNLTDRGHGPSNP 645
                 Y  +A S     G  P+ P
Sbjct: 1019 -----YGSYAGSGPYGGGAPPARP 1037


>gb|EPS72841.1| hypothetical protein M569_01916 [Genlisea aurea]
          Length = 359

 Score =  150 bits (380), Expect = 1e-33
 Identities = 85/205 (41%), Positives = 119/205 (58%), Gaps = 1/205 (0%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            FS  D+  Q+S  DR+ + E IDP +S GMNG++ LC GD CPP+F SPI+GMENI++NQ
Sbjct: 29   FSLDDRCKQMSEGDRVLVKERIDPSASGGMNGYLSLCAGDTCPPVFNSPIQGMENIMNNQ 88

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEEGRRHSQYQDNGRQEYK 1089
            V+  IY  P  H+H+TRPP GV  P+K+V   +VKP P LWHE+  R  +  DNGR    
Sbjct: 89   VICAIYTLPDAHEHITRPPIGVVFPEKTVNLDDVKPEPTLWHEDTGR--KPFDNGRNNNN 146

Query: 1088 REMNHGSNYGPPRVGEPAHRFITNSLQIRNGSTMPRAPAGGGILDIQSPYSQSSYGRHGN 909
                +G+  G   +G+ AHR I+NSLQIR+    P+A  G       SP+ + + G   +
Sbjct: 147  NNNANGTISG-QHLGQAAHRLISNSLQIRDERNNPQAVHG------YSPHPRHAAGYESH 199

Query: 908  RMSSDQRSMPPDHHAYPNGSQHSHH 834
                + +   P+       S +S H
Sbjct: 200  PRYPNNQYNAPERGRVEASSGYSQH 224


>gb|ESW32674.1| hypothetical protein PHAVU_001G007900g [Phaseolus vulgaris]
          Length = 1067

 Score =  149 bits (376), Expect = 3e-33
 Identities = 99/268 (36%), Positives = 140/268 (52%), Gaps = 7/268 (2%)
 Frame = -3

Query: 1433 DKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQVLTV 1254
            +K   +S  +R  + E I+P  S GMNG++ LC G+ CPPIF SP+  ME+I+DNQV+  
Sbjct: 735  NKCKNMSNSERAVVKEKINPKESGGMNGYISLCGGEPCPPIFRSPVASMEDIMDNQVICA 794

Query: 1253 IYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEE-GRRHSQYQDNGRQEYKREM 1080
            IY+ P  H+H+TRPP+GV+ P K+V   ++KP P LWHE+ GRRH  + +NGR+      
Sbjct: 795  IYRLPDAHEHITRPPQGVKFPIKTVTIGDLKPEPVLWHEDSGRRH--HAENGRR------ 846

Query: 1079 NHGSNYGPPRVGEPAHRFITNSLQIRNGSTMPRAPAGGGILDIQSPYSQSSYGRHGNRMS 900
            N   + G   +G+ AHRFI NSLQ +  S   R P  G  +   +P        H   +S
Sbjct: 847  NPPGSSG-RELGDAAHRFIVNSLQAKVVSNGYRHPHNGPPISYPAPMG------HRPPVS 899

Query: 899  SDQRSMPPDHHAYPNGSQHS-HHTPIDRPINYVAPNQNYGYQN---APRLNYNSDVSNQS 732
            S      P + A P  S  S    P   P N V P Q YGY        + YN    +  
Sbjct: 900  SYGYESHPGYVAMPPASSPSLQGRPQFAPYNAVPPAQQYGYNQRYLPSPVPYNPHQPSND 959

Query: 731  YRYPDASRTNYSYHAPSNLTDR-GHGPS 651
            Y++P +     +++  S  + R GH  S
Sbjct: 960  YQHPTSHHYERNHYQGSGGSLRHGHQSS 987


>dbj|BAJ89859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 540

 Score =  149 bits (376), Expect = 3e-33
 Identities = 85/211 (40%), Positives = 117/211 (55%), Gaps = 9/211 (4%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            +S   K   L+ KDR E+ E +DP +S GMNG++ LC GD  PP+F SP+ G+E+I+DNQ
Sbjct: 212  YSLSSKFGHLADKDRNEIKEQLDPSASGGMNGYISLCGGDPSPPVFRSPVDGLEDIMDNQ 271

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEEGRRHSQYQDNGRQEYK 1089
            V+  IYK P  HKH+ RPP GV +PKK VE  ++KP P LWHE+  R    QDN R+ + 
Sbjct: 272  VICSIYKLPDPHKHIARPPVGVIIPKKVVEAGDLKPPPVLWHEDNGRRP--QDNNRRNFN 329

Query: 1088 R--EMNHGSNYGPPRVGEPAHRFITNSLQIRNGSTMPRAPAGGGIL------DIQSPYSQ 933
                 N   +    ++GE AHR + NSL +R G     A     I+      +   P  Q
Sbjct: 330  NSSRQNPAGSIQGHQLGEAAHRLVANSLNVRGGGQYSPARPYQTIMNGMHYPNGMPPRMQ 389

Query: 932  SSYGRHGNRMSSDQRSMPPDHHAYPNGSQHS 840
               GR G  + SD     P+  A P+G Q++
Sbjct: 390  QPAGRSGWHVPSDSL---PNGQAVPSGHQYT 417


>gb|EEE55749.1| hypothetical protein OsJ_04252 [Oryza sativa Japonica Group]
          Length = 1042

 Score =  148 bits (374), Expect = 5e-33
 Identities = 100/282 (35%), Positives = 127/282 (45%), Gaps = 56/282 (19%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            +S   K   L  ++R E+ E IDP SS GMNG++ LC GD CPP+F SP+ G+E+I+DNQ
Sbjct: 699  YSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQ 758

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEEGRRHSQYQDNGR-QEY 1092
            V+  IYK P  HKH+ RPP GV +PKK+VE  ++KP P LWHE+  R     +N R  E 
Sbjct: 759  VICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWHEDSGRRPHDNNNRRPYEN 818

Query: 1091 KREMNHGSNYGPPRVGEPAHRFITNSLQIRNGS-----TMP------------------R 981
                N        ++GE AHR + NSL  R+G      +MP                   
Sbjct: 819  SNRQNPAGAISGRQLGEAAHRLVVNSLNARSGGQYNTPSMPYQTIMNGMPYPNGIPPRME 878

Query: 980  APAGGGILDIQSPYSQ-------------------SSYGR--HGNRMSS-----DQRSMP 879
             PA G  +    P  Q                   S YGR  HG    +     D R   
Sbjct: 879  QPAPGWHVPGDLPNGQVPPAYASSSGHYQNDRSGPSQYGRDNHGRYPYARDNHHDSRGRV 938

Query: 878  PDHHAYPNGSQHSHHTPIDRPINYVAPNQNYG-----YQNAP 768
            P +H     S  SH  P   P  Y  P    G     YQ AP
Sbjct: 939  PPYHQSGGNSYQSHSAPSAGPGRYAQPPPYAGGYGRSYQPAP 980


>gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group]
          Length = 1068

 Score =  148 bits (374), Expect = 5e-33
 Identities = 100/282 (35%), Positives = 127/282 (45%), Gaps = 56/282 (19%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            +S   K   L  ++R E+ E IDP SS GMNG++ LC GD CPP+F SP+ G+E+I+DNQ
Sbjct: 725  YSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQ 784

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEEGRRHSQYQDNGR-QEY 1092
            V+  IYK P  HKH+ RPP GV +PKK+VE  ++KP P LWHE+  R     +N R  E 
Sbjct: 785  VICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWHEDSGRRPHDNNNRRPYEN 844

Query: 1091 KREMNHGSNYGPPRVGEPAHRFITNSLQIRNGS-----TMP------------------R 981
                N        ++GE AHR + NSL  R+G      +MP                   
Sbjct: 845  SNRQNPAGAISGRQLGEAAHRLVVNSLNARSGGQYNTPSMPYQTIMNGMPYPNGIPPRME 904

Query: 980  APAGGGILDIQSPYSQ-------------------SSYGR--HGNRMSS-----DQRSMP 879
             PA G  +    P  Q                   S YGR  HG    +     D R   
Sbjct: 905  QPAPGWHVPGDLPNGQVPPAYASSSGHYQKDRSGPSQYGRDNHGRYPYARDNHHDSRGRV 964

Query: 878  PDHHAYPNGSQHSHHTPIDRPINYVAPNQNYG-----YQNAP 768
            P +H     S  SH  P   P  Y  P    G     YQ AP
Sbjct: 965  PPYHQSGGNSYQSHSAPSAGPGQYAQPPPYAGGYGRSYQPAP 1006


>ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group]
            gi|56785082|dbj|BAD82721.1| putative 5'-3'
            exoribonuclease (XRN3) [Oryza sativa Japonica Group]
            gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa
            Japonica Group] gi|215713440|dbj|BAG94577.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1068

 Score =  148 bits (374), Expect = 5e-33
 Identities = 100/282 (35%), Positives = 127/282 (45%), Gaps = 56/282 (19%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            +S   K   L  ++R E+ E IDP SS GMNG++ LC GD CPP+F SP+ G+E+I+DNQ
Sbjct: 725  YSLNSKFGHLPDRERNEIKEKIDPSSSGGMNGYISLCSGDPCPPVFRSPVDGLEDIMDNQ 784

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEEGRRHSQYQDNGR-QEY 1092
            V+  IYK P  HKH+ RPP GV +PKK+VE  ++KP P LWHE+  R     +N R  E 
Sbjct: 785  VICTIYKLPDSHKHIARPPVGVIIPKKTVEATDLKPPPVLWHEDSGRRPHDNNNRRPYEN 844

Query: 1091 KREMNHGSNYGPPRVGEPAHRFITNSLQIRNGS-----TMP------------------R 981
                N        ++GE AHR + NSL  R+G      +MP                   
Sbjct: 845  SNRQNPAGAISGRQLGEAAHRLVVNSLNARSGGQYNTPSMPYQTIMNGMPYPNGIPPRME 904

Query: 980  APAGGGILDIQSPYSQ-------------------SSYGR--HGNRMSS-----DQRSMP 879
             PA G  +    P  Q                   S YGR  HG    +     D R   
Sbjct: 905  QPAPGWHVPGDLPNGQVPPAYASSSGHYQNDRSGPSQYGRDNHGRYPYARDNHHDSRGRV 964

Query: 878  PDHHAYPNGSQHSHHTPIDRPINYVAPNQNYG-----YQNAP 768
            P +H     S  SH  P   P  Y  P    G     YQ AP
Sbjct: 965  PPYHQSGGNSYQSHSAPSAGPGRYAQPPPYAGGYGRSYQPAP 1006


>ref|XP_004972701.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Setaria italica]
          Length = 1048

 Score =  147 bits (370), Expect = 1e-32
 Identities = 100/279 (35%), Positives = 135/279 (48%), Gaps = 12/279 (4%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            +S   K   L  KDR E+ E +DP  S GMNG++ LC GD  PP+F SP+ G+E+I+DNQ
Sbjct: 718  YSLNSKFGNLPDKDRNEIKEKLDPSHSGGMNGYIALCSGDPSPPVFRSPVDGLEDIMDNQ 777

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEE-GRRHSQYQDNGRQEY 1092
            V+  IYK P  HKH+ RPP GV +PKKSVE  ++KP P LWHE+ GRR   + +N R+ Y
Sbjct: 778  VICSIYKLPDPHKHIARPPAGVIIPKKSVEAGDLKPPPVLWHEDSGRR--PHDNNNRRPY 835

Query: 1091 --KREMNHGSNYGPPRVGEPAHRFITNSLQIRNGSTMPRAPAGGGILDIQSPYSQSSYGR 918
                  N        ++GE AHR + NSL +R G     AP+         PY     G 
Sbjct: 836  DNNNRQNPAGALSGHQLGEAAHRLVVNSLNVRGGG-QHNAPS--------MPYQTIMNGT 886

Query: 917  HGNRMSSDQRSMPPDHHAYPNGSQHSHHTPI----DRPI--NYVAPNQNYGYQNAPRLNY 756
            +                 YPNG  H  +  +    ++P    +  P  N     A   +Y
Sbjct: 887  N-----------------YPNGRHHMGNQGVPPRMEQPAGQGWYVPGDNLTNGQAAYGHY 929

Query: 755  NSDVSNQS-YRYPDASRTNYSYHAPSNLTD-RGHGPSNP 645
              +    S Y   +  R +YS +A  N  D RG  P  P
Sbjct: 930  QHERPGPSRYERDNHGRPHYSPYARDNHHDSRGRVPPPP 968


>ref|XP_004972700.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Setaria italica]
          Length = 1064

 Score =  147 bits (370), Expect = 1e-32
 Identities = 103/293 (35%), Positives = 140/293 (47%), Gaps = 26/293 (8%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            +S   K   L  KDR E+ E +DP  S GMNG++ LC GD  PP+F SP+ G+E+I+DNQ
Sbjct: 718  YSLNSKFGNLPDKDRNEIKEKLDPSHSGGMNGYIALCSGDPSPPVFRSPVDGLEDIMDNQ 777

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEE-GRR------HSQYQD 1110
            V+  IYK P  HKH+ RPP GV +PKKSVE  ++KP P LWHE+ GRR         Y +
Sbjct: 778  VICSIYKLPDPHKHIARPPAGVIIPKKSVEAGDLKPPPVLWHEDSGRRPHDNNNRRPYDN 837

Query: 1109 NGRQEY----KREMNHGSNYGPP------RVGEPAHRFITNSLQIRNGSTMPRAPAGGGI 960
            N R+ Y    +R  ++ S   P       ++GE AHR + NSL +R G     AP+    
Sbjct: 838  NNRRPYDNNNRRPSDNSSRQNPAGALSGHQLGEAAHRLVVNSLNVRGGG-QHNAPS---- 892

Query: 959  LDIQSPYSQSSYGRHGNRMSSDQRSMPPDHHAYPNGSQHSHHTPI----DRPI--NYVAP 798
                 PY     G +                 YPNG  H  +  +    ++P    +  P
Sbjct: 893  ----MPYQTIMNGTN-----------------YPNGRHHMGNQGVPPRMEQPAGQGWYVP 931

Query: 797  NQNYGYQNAPRLNYNSDVSNQS-YRYPDASRTNYSYHAPSNLTD-RGHGPSNP 645
              N     A   +Y  +    S Y   +  R +YS +A  N  D RG  P  P
Sbjct: 932  GDNLTNGQAAYGHYQHERPGPSRYERDNHGRPHYSPYARDNHHDSRGRVPPPP 984


>ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Glycine max]
          Length = 1065

 Score =  146 bits (369), Expect = 2e-32
 Identities = 94/272 (34%), Positives = 135/272 (49%), Gaps = 13/272 (4%)
 Frame = -3

Query: 1433 DKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQVLTV 1254
            +K   +   +R  + E I+P  S GMNG++ LC G+ CPPIF SP+  ME+I+DN V+  
Sbjct: 736  NKCKNMPNSERAVVKEKINPKESGGMNGYISLCGGEPCPPIFRSPVASMEDIMDNHVICA 795

Query: 1253 IYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEE-GRRHSQYQDNGRQEYKREM 1080
            IY+ P  H H+TRPP+GV+ PKK V   ++KP P LWHE+ GRRH  + +NGR+      
Sbjct: 796  IYRLPDAHTHITRPPQGVKFPKKIVGIEDLKPEPVLWHEDSGRRH--HAENGRK------ 847

Query: 1079 NHGSNYGPPRVGEPAHRFITNSLQIRNGSTMPRAPAGGGILDIQSP--YSQSSYGRHGNR 906
            N   +     +G+ AHR I NSLQ +  +   R P  G  +   +P  + +     HG  
Sbjct: 848  NPPGSISGRELGDAAHRLIVNSLQAKVDTNGYRHPHNGPPISYPAPMGHHRQPLPSHGYE 907

Query: 905  MSSDQRSMPPDHHAYPNGSQHSHHTPIDRPINYVAPNQNYGYQN---APRLNYN------ 753
                  +MPP     P  +      P   P N V     YGY     AP + YN      
Sbjct: 908  SCPGYVAMPP-----PISAPSLQGRPQFAPYNAVPTAPQYGYNQPYPAPPVGYNHPRQQS 962

Query: 752  SDVSNQSYRYPDASRTNYSYHAPSNLTDRGHG 657
            + V    Y++P +     ++H  S  + R HG
Sbjct: 963  NPVERNDYQHPRSHNYERNHHQGSGGSSR-HG 993


>ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Glycine max]
          Length = 1075

 Score =  146 bits (368), Expect = 2e-32
 Identities = 98/265 (36%), Positives = 134/265 (50%), Gaps = 7/265 (2%)
 Frame = -3

Query: 1433 DKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQVLTV 1254
            +K   +   +R  + E I+P  S GMNG++ LC G+ CPPIF SPI  ME+I+DN V+  
Sbjct: 736  NKCKNMPNSERAVVKEKINPKESGGMNGYISLCGGEPCPPIFRSPIASMEDIMDNHVICA 795

Query: 1253 IYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEE-GRRHSQYQDNGRQEYKREM 1080
            IY+ P  HKH+TRPP+GV+ PKK VE  ++KP P LWHE+ GRRH  + +NGR+      
Sbjct: 796  IYRLPDAHKHITRPPQGVKFPKKIVEIGDLKPEPVLWHEDSGRRH--HSENGRK------ 847

Query: 1079 NHGSNYGPPRVGEPAHRFITNSLQIRNGSTMPRAPAGGGILDIQSP--YSQSSYGRHGNR 906
            N   +     +G+ AHR I NSLQ +  +   R P  G  +   +P  + +     +G  
Sbjct: 848  NPPGSISGRELGDAAHRLIVNSLQAKVDTNGYRHPHNGPPISYPAPMGHYRQPVPSYGYE 907

Query: 905  MSSDQRSMPPDHHAYPNGSQHSHHTPIDRPINYVAPNQNYGYQN---APRLNYNSDVSNQ 735
             S    +MPP     P  +      P   P N     Q YG       P + YN     Q
Sbjct: 908  SSPGYVAMPP-----PISAPSLQGRPQFAPYNAAPTAQQYGCNQPYPPPPVVYNHP-RQQ 961

Query: 734  SYRYPDASRTNYSYHAPSNLTDRGH 660
            S  Y    R +Y  HA SN  +R H
Sbjct: 962  SNSY---ERNDYQ-HARSNHYERNH 982


>ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Brachypodium distachyon]
          Length = 1061

 Score =  144 bits (363), Expect = 9e-32
 Identities = 96/280 (34%), Positives = 133/280 (47%), Gaps = 12/280 (4%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            +S   K   L   +R  + E +DP +S GMNG++ LC GD  PP+F SP+ G+E+I+DNQ
Sbjct: 725  YSLNSKFGHLPDDERNTIKELLDPSASGGMNGYISLCGGDPSPPVFRSPVDGLEDIMDNQ 784

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEE-GRRHSQYQDNGRQEY 1092
            V+  IYK P  HKH+ RPP GV +PKK VE  ++KP P LWHE+ GRR     +N R   
Sbjct: 785  VICSIYKLPDPHKHIARPPIGVIIPKKIVEAGDLKPPPVLWHEDTGRRPYDNNNNNR--- 841

Query: 1091 KREMNHGSNYGPP------RVGEPAHRFITNSLQIRNGSTMPRAPAGGGILDIQSPYSQS 930
             R  ++ S   PP      ++GE AHR + NSL +R+G     APA         PY   
Sbjct: 842  -RHSDNSSRQNPPGAMHGRQLGEAAHRLVANSLNVRSGGQY--APA--------RPYQTI 890

Query: 929  SYGRHGNRMSSDQRSMPPDHHAYPNGSQHSHHTPIDRPINYV----APNQNYGYQNAPRL 762
              G H                 YPNG       P+ RP  +V     PN       +P  
Sbjct: 891  MSGMH-----------------YPNGMPPRMERPVGRPGWHVPGDNVPNGQVPIYASPSG 933

Query: 761  NYNSDVSNQSYRYPDASRTNYSYHAPSNLTDRGHGPSNPT 642
            ++  +  N+    P A  +++   A   +    H  S  T
Sbjct: 934  HHQYERDNRGRHQPYARDSHHDPRAVGRVQSGYHQNSGNT 973


>gb|AFW61093.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
          Length = 480

 Score =  144 bits (362), Expect = 1e-31
 Identities = 78/184 (42%), Positives = 106/184 (57%), Gaps = 6/184 (3%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            +S   K   L  KDR  + E +DP +S GMNG++ LC GD  PP+F SP+ G+E+I+DNQ
Sbjct: 61   YSLNSKFGHLPDKDRGAIKEKLDPSASGGMNGYIALCGGDPSPPVFRSPVDGLEDIMDNQ 120

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEE-GRRHSQYQDNGRQEY 1092
            V+  IYK P  HKH+ RPP GV +PKKSVE  ++KP P LWHE+ GRR   + +N R+ Y
Sbjct: 121  VICSIYKLPDPHKHIARPPAGVIIPKKSVEAGDLKPPPVLWHEDSGRR--PHDNNHRRPY 178

Query: 1091 --KREMNHGSNYGPPRVGEPAHRFITNSLQIRNG--STMPRAPAGGGILDIQSPYSQSSY 924
                  N        ++GE AHR + NSL +R G  +  P  P    +  +  P  +   
Sbjct: 179  DNSNRQNPSGALSGRQLGEAAHRLVVNSLNVRGGGQNNSPSMPYQTMMSGMNYPNGRHHV 238

Query: 923  GRHG 912
            G HG
Sbjct: 239  GNHG 242


>gb|AFW61091.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
          Length = 1058

 Score =  144 bits (362), Expect = 1e-31
 Identities = 78/184 (42%), Positives = 106/184 (57%), Gaps = 6/184 (3%)
 Frame = -3

Query: 1445 FSFYDKGSQLSGKDRLELVEAIDPISSEGMNGFMCLCDGDACPPIFTSPIKGMENILDNQ 1266
            +S   K   L  KDR  + E +DP +S GMNG++ LC GD  PP+F SP+ G+E+I+DNQ
Sbjct: 722  YSLNSKFGHLPDKDRGAIKEKLDPSASGGMNGYIALCGGDPSPPVFRSPVDGLEDIMDNQ 781

Query: 1265 VLTVIYKCPPEHKHVTRPPKGVRMPKKSVEEFEVKPSP-LWHEE-GRRHSQYQDNGRQEY 1092
            V+  IYK P  HKH+ RPP GV +PKKSVE  ++KP P LWHE+ GRR   + +N R+ Y
Sbjct: 782  VICSIYKLPDPHKHIARPPAGVIIPKKSVEAGDLKPPPVLWHEDSGRR--PHDNNHRRPY 839

Query: 1091 --KREMNHGSNYGPPRVGEPAHRFITNSLQIRNG--STMPRAPAGGGILDIQSPYSQSSY 924
                  N        ++GE AHR + NSL +R G  +  P  P    +  +  P  +   
Sbjct: 840  DNSNRQNPSGALSGRQLGEAAHRLVVNSLNVRGGGQNNSPSMPYQTMMSGMNYPNGRHHV 899

Query: 923  GRHG 912
            G HG
Sbjct: 900  GNHG 903